Life Sciences Commons^™

Reber’S Caterpillar Offers No Help, Carl Safina

Animal Sentience

Reber’s target article “Caterpillars, consciousness and the origins of mind” seems only to shift but not to address the question of where the mind is and how minds occur.

Sneaky Salt Contributes To High Blood Pressure, Rodney Richmond

Faculty Research ​and Publications

No abstract provided.

A Novel Rrm3 Function In Restricting Dna Replication Via An Orc5-Binding Domain Is Genetically Separable From Rrm3 Function As An Atpase/Helicase In Facilitating Fork Progression, Salahuddin Syed, Claus Desler, Lene J Rasmussen, Kristina H Schmidt

Molecular Biosciences Faculty Publications

In response to replication stress cells activate the intra-S checkpoint, induce DNA repair pathways, increase nucleotide levels, and inhibit origin firing. Here, we report that Rrm3 associates with a subset of replication origins and controls DNA synthesis during replication stress. The N-terminal domain required for control of DNA synthesis maps to residues 186-212 that are also critical for binding Orc5 of the origin recognition complex. Deletion of this domain is lethal to cells lacking the replication checkpoint mediator Mrc1 and leads to mutations upon exposure to the replication stressor hydroxyurea. This novel Rrm3 function is independent of its established role …

Effects Of 17 Β-Estradiol And Progesterone On Acropora Cervicornis And Porites Astreoides Growth And Reproduction, Joshua L. Stocker

HCNSO Student Theses and Dissertations

Reef-building coral populations throughout the world are being threatened by numerous stressors and continue to decline. As potent endocrine-disrupting compounds, exogenous sex steroid contamination has been a largely overlooked stressor to corals. Previous research indicates these compounds are prevalent in marine environments, fluctuate annually along with reproductive cycles, can bioaccumulate, and have had variable effects on growth and reproduction in several cnidarian species. This project had three primary objectives: (1) establish environmental estradiol and progesterone concentrations in Broward County and lower Florida Keys reef environments, (2) conduct 17 β-estradiol and progesterone larval assays on P. astreoides larvae to determine the …

Invasive Species Impacts On Infrastructure, Invasive Species Advisory Committee

National Invasive Species Council

Executive Summary

Invasive species represent one of the most significant threats to ecosystems, human and animal health, infrastructure, the economy, and cultural resources. Because potentially invasive, non-native species typically enter the United States through ports of entry in urban environments, some of the first observable impacts may be to infrastructure, yet little is known about the economic costs associated with these impacts to the “built” environment. In addition, federal agencies currently lack the authority necessary to effectively prevent, eradicate, and control invasive species that impact the human-built environment. This lack of authority prevents rapid response to some of the most …

Control Of Gene Expression By Rna Binding Protein Action On Alternative Translation Initiation Sites, Angela Re, Levi Waldron, Alessandro Quattrone

Publications and Research

Transcript levels do not faithfully predict protein levels, due to post-transcriptional regulation of gene expression mediated by RNA binding proteins (RBPs) and non-coding RNAs. We developed a multivariate linear regression model integrating RBP levels and predicted RBP-mRNA regulatory interactions from matched transcript and protein datasets. RBPs significantly improved the accuracy in predicting protein abundance of a portion of the total modeled mRNAs in three panels of tissues and cells and for different methods employed in the detection of mRNA and protein. The presence of upstream translation initiation sites (uTISs) at the mRNA 5' untranslated regions was strongly associated with improvement …

Calcium-Mediated Actin Reset (Caar) Mediates Acute Cell Adaptations, Pauline Wales, Christian Schuberth, Roland Aufschnaiter, Johannes Fels, Ireth Garcia-Aguilar, Annette Janning, Christopher D. Dlugos, Marco Schaefer-Herte, Christoph Klingner, Mike Waelte, Julian Kuhlmann, Ekaterina Menis, Hockaday Kang Hockaday Kang, Kerstin C. Maier, Wenya Hou, Antonella Russo, Henry N. Higgs

Dartmouth Scholarship

Actin has well established functions in cellular morphogenesis. However, it is not well understood how the various actin assemblies in a cell are kept in a dynamic equilibrium, in particular when cells have to respond to acute signals. Here, we characterize a rapid and transient actin reset in response to increased intracellular calcium levels. Within seconds of calcium influx, the formin INF2 stimulates filament polymerization at the endoplasmic reticulum (ER), while cortical actin is disassembled. The reaction is then reversed within a few minutes. This Calcium-mediated actin reset (CaAR) occurs in a wide range of mammalian cell types and in …

Striatal Dopaminergic Innervation Regulates Subthalamic Beta-Oscillations And Cortical-Subcortical Coupling During Movements: Preliminary Evidence In Subjects With Parkinson’S Disease, Andrea Canessa, Nicolo G. Pozzi, Gabriele Arnulfo, Joachim Brumberg, Martin M. Reich, Gianni Pezzoli, Maria F. Ghilardi, Cordula Matthies, Frank Steigerwald, Jens Volkman, Ioannis U. Isais

Publications and Research

Activation of the basal ganglia has been shown during the preparation and execution of movement. However, the functional interaction of cortical and subcortical brain areas during movement and the relative contribution of dopaminergic striatal innervation remains unclear. We recorded local field potential (LFP) activity from the subthalamic nucleus (STN) and high-density electroencephalography (EEG) signals in four patients with Parkinson’s disease (PD) off dopaminergic medication during a multi-joint motor task performed with their dominant and non-dominant hand. Recordings were performed by means of a fully-implantable deep brain stimulation (DBS) device at 4 months after surgery. Three patients also performed a single-photon …

The Impact Of Organic Farms: Biodiversity And Climate Change Resilience In The Southeast, Josie Newton

Earth and Environmental Sciences Presentations

Resilience to climate change serves as an indicator of the effectiveness of organic farming practices. Resilience means that an area is able to return to a stable state after a disturbance. In this context, it means that the area is able to function regularly even in the face of climate change, an instance that affects species health and biodiversity. By mapping the locations of organic farms across the southeastern United States along with the resilience scores of areas as evaluated by The Nature Conservancy and comparing this map to farm locations and biodiversity measures, we are able to determine the …

Mapping The Impact Of Intensive Rotational Grazing On Soil Fertility Over Time On Greenbrier Farms In Pickens County, South Carolina, Emily Kirby

Earth and Environmental Sciences Presentations

Intensive rotational grazing (IRG) is a management technique that involves a more intentional management approach which includes increased paddock numbers, shorter grazing periods, larger livestock presence per acre, and longer periods of rest on pastures. Potential advantages of this management technique include improved forage quality, greater yield, decreased erosion, stable production during adverse growing condition, and improved soil fertility. This study collects and analyzes data to understand the impact of rotational grazing on soil fertility as measured by SOC (soil organic carbon) and SON (soil organic nitrogen) on Greenbrier Farms in Easley, South Carolina. This study analyzes the transition from …

Habitat Quality Modeling For Bird Species At Furman University, Emma Cook

Earth and Environmental Sciences Presentations

In rapidly urbanizing areas, such as Greenville County in Upstate South Carolina, it is important to study habitat use and quality across land cover types in order to maximize conservation. Habitat fragmentation is a threat to many species of birds in areas with increasing development, especially those species that utilize larger forest patches for nesting and foraging. While land cover type and patch size are extremely important factors in determining habitat quality for birds, recent research has shown that the matrix of surrounding landscape proves to be very important as well. The landscape matrix, sometimes called landscape mosaic, considers the …

Spatial Distribution Of High Obesity Rates In South Carolina, Tom Bennett

Earth and Environmental Sciences Presentations

In 2015, the rate of adult obesity in South Carolina was nearly 32%, which places South Carolina as the 13th worst state when it comes to the prevalence of adult obesity. Along with overall rates of adult obesity, South Carolina has the 8th highest high school student obesity rate with 16.3% of high school students being obese. These statistics are troubling because obesity is a primary cause of Type II Diabetes, high blood pressure, and many other negative health effects. These health care issues then affect supply and demand for health care, advertising, physical exercise, and many other market segments, …

Inflammatory Gene Expression In Women Diagnosed With Polycystic Ovarian Syndrome, Myles K. Taylor

Electronic Theses & Dissertations

Polycystic ovarian syndrome (PCOS) is a common endocrine disorder in women of reproductive age. The pathophysiology of PCOS has conventionally thought to originate from androgen excess. However, recent evidence suggests that androgen excess is a downstream consequence to inflammatory dysregulation and subsequent metabolic abnormalities. Inflammatory mRNA gene expression of TNFa and IL-1ß in mononuclear cells isolated from women diagnosed with PCOS was explored using qPCR. Additionally, the correlations between body mass index (BMI) and fasting glucose on mRNA expression of TNFa and IL-1ß were explored. mRNA expression of both TNFa and IL-1ß were found to be significantly higher in PCOS …

Hnrnpa2 Is A Novel Histone Acetyltransferase That Mediates Mitochondrial Stress-Induced Nuclear Gene Expression, Manti Guha, Satish Srinivasan, Kip Guja, Edison Mejia, Miguel Garcia-Diaz, F. Brad Johnson, Gordon Ruthel, Brett A. Kaufman, Eric F. Rappaport, M. Rebecca Glineburg, Ji-Kang Fang, Andres J. Klein-Szanto, Hiroshi Nakagawa, Jeelan Basha, Tapas Kundu, Narayan G. Avadhani

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Reduced mitochondrial DNA copy number, mitochondrial DNA mutations or disruption of electron transfer chain complexes induce mitochondria-to-nucleus retrograde signaling, which induces global change in nuclear gene expression ultimately contributing to various human pathologies including cancer. Recent studies suggest that these mitochondrial changes cause transcriptional reprogramming of nuclear genes although the mechanism of this cross talk remains unclear. Here, we provide evidence that mitochondria-to-nucleus retrograde signaling regulates chromatin acetylation and alters nuclear gene expression through the heterogeneous ribonucleoprotein A2 (hnRNAP2). These processes are reversed when mitochondrial DNA content is restored to near normal cell levels. We show that the mitochondrial stress-induced …

Effect Of Diet On Mortality And Larval Duration In Chrysodeixis Includens (Lepidoptera: Noctuidae), Andrea Przygoda, Erin E. Barding, Margaret Smith

Georgia Journal of Science

Diet mediates many life history trade-offs and therefore is an important environmental component to consider. Because some organisms share food sources with humans, they encounter anthropogenic changes to their diet, such as genetically modified crops and chemical applications, which can contribute to additional complexity in their environment. To understand the effect of diet on the life history of the soybean looper, Chrysodeixis includens, we exposed larvae to several different food sources, including genetically modified soybean leaves and the pesticide spinosad. Significant differences in larval instar duration and timing of larval mortality among treatments were observed indicating that type of diet …

The Vertical And Horizontal Distribution Of Deep-Sea Crustaceans Of The Order Euphausiacea (Malacostraca: Eucarida) From The Northern Gulf Of Mexico With Notes On Reproductive Seasonality., Charles Douglas Fine

HCNSO Student Theses and Dissertations

The vertical and horizontal distributions of Euphausiacea in the northern Gulf of Mexico, including the location of the Deepwater Horizon oil spill, were analyzed from 340 trawl samples collected between April-June, 2011. This study is the first comprehensive survey of euphausiid distributions from depths deeper than 1000 m in the Gulf of Mexico and included stratified sampling from five discrete depth ranges (0-200 m, 200-600 m, 600-1000 m, 1000-1200 m, and 1200-1500 m). In addition, this study encompasses the region heavily impacted by the Deepwater Horizon oil spill. Data presented here could potentially be used in ecosystem models investigating trophic …

Very Rapid Onset Cannabis Dependence Risk In Relation To Co-Occurring Use Of Other Psychoactive Drugs, Olga A. Vsevolozhskaya, Fernando A. Wagner, James C. Anthony

Biostatistics Presentations

Background: Epidemiological estimates for lifetime cumulative incidence indicate that for every 9-11 who start using cannabis, one becomes a case of the cannabis dependence syndrome (CDS) – i.e., roughly 9%-11%. More recent estimates clarify that CDS risk might be much lower among ’cannabis only’ users, due in part to the fact that many ’cannabis only’ users try the drug a few times and never again. We turned to Hill functional analysis in order to study CDS probability soon after 1st cannabis use, estimated across strata defined by the number of recent days of cannabis use, with an acknowledgment that a …

Understanding The Importance Of Intermittently Fragmented Stream Habitat For Isolated Westslope Cutthroat Trout (Oncorhynchus Clarki Lewisi) In The Colville National Forest, Washington, Forrest Michael Carpenter

Dissertations and Theses

Climate change and anthropogenic effects have vastly reduced Westslope Cutthroat Trout (Oncorhynchus clarki lewisi, WCT) habitat throughout their range, including the Colville National Forest in northeastern Washington where this study was conducted. Many native salmonid populations have declined in abundance since the early 1900s due to a variety of climate- and human-driven forces. Westslope Cutthroat Trout are especially sensitive to habitat loss or degradation and to climate change. Together, climate change, habitat degradation, and non-native salmonid invasions are contributing to increasingly fragmented WCT populations. Ongoing and predicted future warming trends are expected to further fragment these populations and …

Efficient Method For Transfer Of Microinjected Eggs To Mouse Ampulla For Generating Transgenic Mice, Guang Wen, Jin Di, Qian Li, Jianling Chen, Ling Jin, Cheng Wang, Sanqing Xu

Publications and Research

Background: The new method described here is highly efficient in transferring microinjected mouse eggs (MEs) through the bursa membrane of a surrogate mother mouse to the ampulla of the oviduct without damaging the blood vessels on the bursa membrane.

Results: This method causes no loss of blood, and it produces newborn pups/founders from approximately 70% of the transferred MEs, because only a small hole is made on the blood vessel–free area of the bursa membrane and ampulla of the surrogate mother mouse. The infundibulum remains intact. The small hole on the bursa membrane/ ampulla may already heal up before the …

Interactions Among Climate, Topography And Herbivory Control Greenhouse Gas (Co2, Ch4 And N2o) Fluxes In A Subarctic Coastal Wetland, Kathy C. Kelsey, A. Joshua Leffler, Karen H. Beard, Joel A. Schmutz, Ryan T. Choi, J. M. Welker

Wildland Resources Faculty Publications

High-latitude ecosystems are experiencing the most rapid climate changes globally, and in many areas these changes are concurrent with shifts in patterns of herbivory. Individually, climate and herbivory are known to influence biosphere-atmosphere greenhouse gas (GHG) exchange; however, the interactive effects of climate and herbivory in driving GHG fluxes have been poorly quantified, especially in coastal systems that support large populations of migratory waterfowl. We investigated the magnitude and the climatic and physical controls of GHG exchange within the Yukon-Kuskokwim Delta in western Alaska across four distinct vegetation communities formed by herbivory and local microtopography. Net CO2 flux was greatest …

An Examination Of Student Outcomes In Studio Chemistry, Alan L. Kiste, Gregory E. Scott, Jesse Paul Bukenberger, Miles Markmann, Jennifer Moore

Chemistry and Biochemistry

Twenty years ago, a major curriculum revision at a large, comprehensive university in the Western United States led to the implementation of an integrated lecture/laboratory (studio) experience for our engineering students taking general chemistry. Based on these twenty years of experience, construction of four purpose-built studio classrooms to house the majority of the remaining general chemistry courses was completed in 2013. A detailed study of the effects of the entire ecology of the studio experience on student success was initiated at that time. Data from content knowledge pre- and post-tests, learning attitudes surveys, and student course evaluations show positive effects …

Trophic Ecology Of Green Turtles (Chelonia Mydas) From Dry Tortugas National Park, Florida, David C. Roche

HCNSO Student Theses and Dissertations

Located 100 km west of Key West, Florida, Dry Tortugas National Park (DRTO) is a largely untouched subtropical marine ecosystem that serves as an important developmental habitat, nesting ground, and foraging area for several species of sea turtles, including green turtles. The Park supports a recovering population of green turtles comprised of resident juveniles, subadults, and adults of both sexes; nesting females include residents and migrating females that only return to nest. Stable isotope analysis has been applied widely to describe the trophic ecology of green turtles, from urbanized bays with significant anthropogenic input, to relatively pristine ecosystems with healthy …

Weight Management Delivered Through An App, May Help Resolve Body Image Dissatisfaction In Women Enrolled In Wic, Alexis Ariel O’Connell

Honors Capstones

No abstract provided.

Copper Oxide Nanoparticles Impact Several Toxicological Endpoints And Cause Neurodegeneration In Caenorhabditis Elegans, Michael Joseph Mashock, Tyler Zanon, Anthony D. Kappell, Lisa N. Petrella, Erik C. Andersen, Krassimira R. Hristova

Biological Sciences Faculty Research and Publications

Engineered nanoparticles are becoming increasingly incorporated into technology and consumer products. In 2014, over 300 tons of copper oxide nanoparticles were manufactured in the United States. The increased production of nanoparticles raises concerns regarding the potential introduction into the environment or human exposure. Copper oxide nanoparticles commonly release copper ions into solutions, which contribute to their toxicity. We quantified the inhibitory effects of both copper oxide nanoparticles and copper sulfate on C. elegans toxicological endpoints to elucidate their biological effects. Several toxicological endpoints were analyzed in C. elegans, including nematode reproduction, feeding behavior, and average body length. We examined three …

Bird Response To Land Use Change In Northern Argentina, David J. Flaspohler

TechTalks

Land use change is responsible for changes in wildlife populations including declines for many species. When one land cover type is converted into another for forestry, agriculture or pasture, some bird species are harmed while others may be favored. Understanding how biodiversity responds to land use change is essential to allowing us to anticipate and respond to management options and economic drivers of change. We studied the response of a diverse bird community in an historically grassland portion of northern Argentina, where eucalyptus plantations are expanding rapidly to support timber, pulp and incipient bioenergy industries. Plantations contained the fewest bird …

Preliminary Examination Of The Bacterial Diversity Harbored By The Pill Bug (Armadillidium Vulgare), Sondos Alhajouj

Theses & Dissertations

Pill bugs (Armadillidium vulgare) were examined at 4 time points during 2015- 2016. The time points corresponded to summer, fall, winter, and spring. At each time point, 2 to 10 pill bugs were collected from each of three sites. All sites were located in San Antonio, Texas. The first site was in central San Antonio, but due to difficulties in collecting specimens the first site was only utilized at the first time point. The remaining localities, Bonilla Science Hall on the campus of the University of the Incarnate Word and a private residence in northwest San Antonio, were …

The Effect Of Varying Environmental Conditions On The Growth Of Stenotrophomonas Maltophilia, Norah Alqahtani

Theses & Dissertations

Stenotrophomonas maltophilia has emerged as an important opportunistic pathogen in the debilitated host. It possesses the ability to target and colonize respiratory-tract epithelial cells and grow on the surface of medical devices. It is associated with a significant case-fatality ratio in cystic fibrosis patients. S. maltophilia species have the ability to grow in bacterial biofilms, which further complicates these infections by providing the opportunity for acquisition of antibiotic resistant genes. This study investigated the effects on the growth of different strains of the same species of S. maltophilia, ATCC 51331 and 13637, when the selected environmental factors are varied. …

Seeing The Invisible: Revealing Atrial Ablation Lesions Using Hyperspectral Imaging Approach, Narine Muselimyan, Luther Swift, Huda Asfour, Tigran Chahbazian, Ramesh Mazhari, Marco Mercader, Narine Sarvazyan

Pharmacology and Physiology Faculty Publications

Background

Currently, there are limited means for high-resolution monitoring of tissue injury during radiofrequency ablation procedures.

Objective

To develop the next generation of visualization catheters that can reveal irreversible atrial muscle damage caused by ablation and identify viability gaps between the lesions.

Methods

Radiofrequency lesions were placed on the endocardial surfaces of excised human and bovine atria and left ventricles of blood perfused rat hearts. Tissue was illuminated with 365nm light and a series of images were acquired from individual spectral bands within 420-720nm range. By extracting spectral profiles of individual pixels and spectral unmixing, the relative contribution of ablated …

Novel Aspects Of Drosophila Suzukii (Diptera: Drosophilidae) Biology And An Improved Method For Culturing This Invasive Species With A Modified D. Melanogaster Diet, Blair J. Sampson, Trevor Mallette, Karla M. Addesso, Oscar E. Liburd, Lindsy E. Iglesias, Stephen J. Stringer, Chris T. Werle, Donna A. Shaw, Drew Larsen, John J. Adamczyk

Agricultural and Environmental Sciences Faculty Research

Drosophila suzukii (Matsumara) (Diptera: Drosophilidae), the spotted wing drosophila, is a global pest of soft fruits now rearable on a standard D. melanogaster (Meigen) diet containing the fly's own natural food: soft-skinned berries. The techniques tested here can save 40% of cultures from microbial contamination that develops after combining artificial food sources (e.g., standard drosophila media) with unsterilized host plant material (berries). A suitable ratio for mixing dietary ingredients for a vial or test-tube rearing system includes, by weight, 1 part berry tissue for oviposition, 1.5 parts dry diet media for carbohydrate, 7 parts clean water for moisture, and ∼5 …

Cows - Clean Ocean Wave Sculpture, Kim Bernard

Artist in Residence: Kim Bernard

Description and images from Kim Bernard's University of New England Artist in Residence fall semester 2016 culminating project. Kim worked with UNE students and faculty to gather ocean debris and weave it into a permanent art installment at UNE's Arthur P. Girard Marine Science Center.