Life Sciences Commons^™

Bioanalysis For Cocaine, Opiates, Methadone And Amphetamines Exposure Detection During Pregnancy, Marta Concheiro, Elena Lendoiro, Ana De Castro, Eva Gonzalez-Colmenero, Ana Concheiro-Guisan, Patricia Penas-Silva, Manuel Macias-Cortina, Angelines Cruz-Landeira, Manuel Lopez-Rivadulla

Publications and Research

Drug exposure during pregnancy constitutes a major legal issue and public health concern. Drug and metabolite determination in biological matrices from mother and newborn is an objective indication of prenatal drug exposure. However, limited data are available regarding the interpretation of these analytical results in terms of window of detection and degree of exposure. We collected paired maternal hair, meconium, placenta and umbilical cord from 727 mother-newborn dyads. We analyzed these specimens by liquid chromatography tandem mass spectrometry for the determination of cocaine, opioids, methadone and amphetamines, and compared the analytical results from the four different matrices. The cases were …

Expanding Our Understanding Of The Trade In Marine Aquarium Animals, Andrew L. Rhyne, Michael F. Tlusty, Joseph T. Szczebak, Robert J. Holmberg

Arts & Sciences Faculty Publications

The trade of live marine animals for home and public aquaria has grown into a major global industry. Millions of marine fishes and invertebrates are removed from coral reefs and associated habitats each year. The majority are imported into the United States, with the remainder sent to Europe, Japan, and a handful of other countries. Despite the recent growth and diversification of the aquarium trade, to date, data collection is not mandatory, and hence comprehensive information on species volume and diversity is lacking. This lack of information makes it impossible to study trade pathways. Without species-specific volume and diversity data, …

The Central Arctic Ocean-Preventing Another Tragedy Of The Commons, Andrew J. Norris, Patrick Mckinley

Arts & Sciences Faculty Publications

Arctic sea ice is melting, slowly but inexorably. As the ice disappears, mankind will be afforded access to regions and activities, including commercial fishing, that have been inaccessible for our entire recorded history. There is currently no regulatory body or mechanism in the high seas Arctic (also referred to as the central Arctic Ocean) to conserve and manage fish stocks, the distribution and concentration of which are poorly understood, and that might be the target of commercial fisheries. This article examines the extent and nature of ice recession in the Arctic, and its likely effect on the accessibility of central …

Season, But Not Symbiont State, Drives Microbiome Structure In The Temperate Coral Astrangia Poculata., Koty H. Sharp, Zoe A. Pratte, Allison H. Kerwin

Arts & Sciences Faculty Publications

BACKGROUND: Understanding the associations among corals, their photosynthetic zooxanthella symbionts (Symbiodinium), and coral-associated prokaryotic microbiomes is critical for predicting the fidelity and strength of coral symbioses in the face of growing environmental threats. Most coral-microbiome associations are beneficial, yet the mechanisms that determine the composition of the coral microbiome remain largely unknown. Here, we characterized microbiome diversity in the temperate, facultatively symbiotic coral Astrangia poculata at four seasonal time points near the northernmost limit of the species range. The facultative nature of this system allowed us to test seasonal influence and symbiotic state (Symbiodinium density in the coral) on microbiome …

Crassulacean Acid Metabolism As A Continuous Trait: Variability In The Contribution Of Crassulacean Acid Metabolism (Cam) In Populations Of Portulacaria Afra, Lonnie J. Guralnick, Kate Gladsky

Arts & Sciences Faculty Publications

Portulacaria afra L. is a dominant facultative CAM species growing in the Southeastern Cape of South Africa. P. afra is well adapted to regions of the Spekboom thicket in areas of limited and sporadic rainfall. P. afra populations occur in isolated drainages. We hypothesized the utilization of CAM would vary in the different populations in response to rainfall and temperature gradients. Carbon isotope composition can be used to determine the contribution of CAM in leaf tissue. P. afra leaves of populations were analyzed in transects running south to north and east to west in locations from the coast to elevations …

Carbon Dioxide Sources From Alaska Driven By Increasing Early Winter Respiration From Artic Tundra, Roisin Commane, Jacob Lindaas, Joshua Benmergui, Kristina Luus, Rachel Chang, Bruce Daube, Eugenie Euskirchen, John Henderson, Anna Karion, John Miller, Scot Miller, Nicholas Parazoo, James Randerson, Colm Sweeney, Pieter Tans, Kirk Thoning, Sander Veraverbeke, Charles Miller, Steven Wofsy

Articles

High-latitude ecosystems have the capacity to release large amounts of carbon dioxide (CO2) to the atmosphere in response to increasing temperatures, representing a potentially significant positive feedback within the climate system. Here, we combine aircraft and tower observations of atmospheric CO2 with remote sensing data and meteorological products to derive temporally and spatially resolved year-round CO2 fluxes across Alaska during 2012-2014. We find that tundra ecosystems were a net source of CO2 to the atmosphere annually, with especially high rates of respiration during early winter (October through December). Long-term records at Barrow, AK, suggest that CO2emission rates from North Slope …

Extraction And Quantification Of Sinapinic Acid From Irish Rapeseed Meal And Assessment Of Angiotensin-I Converting Enzyme (Ace-I) Inhibitory Activity, Leah Quinn, Steven G. Gray, Steve Meaney, Stephen Finn, Padraig Mcloughlin, Maria Hayes

Articles

Phenolic compounds, including phenolic acids, are known to play a protective role against the development of cardiovascular disease. The aim of this work was to generate a phenolic acid extract from Irish rapeseed meal, to determine the quantity of sinapinic acid (SA) in this fraction and to assess the ability of this fraction to inhibit the enzyme angiotensin-I converting enzyme (ACE-I; EC 3.4.15.1). A crude phenolic extract (fraction 1), free phenolic acid containing extract (fraction 2), and an extract containing phenolic acids liberated from esters (fraction 3) were generated from Irish rapeseed meal using a methanol:acetone:water solvent mixture (7:7:6). The …

1,10-Phenanthroline-5,6-Dione-Based Compounds Are Effective In Disturbing Crucial Physiological Events Of Phialophora Verrucosa, Marcela Queiroz Granato, Diego De Souza Goncalves, Sergio Henrique Seabra, Malachy Mccann, Michael Devereux, Andre Luis De Souza Dos Santos, Lucimar Ferreira Kneipp

Articles

Phialophora verrucosa is a dematiaceous fungus able to cause chromoblastomycosis, phaeohyphomycosis and mycetoma. All these fungal diseases are extremely difficult to treat and often refractory to the current therapeutic approaches. Therefore, there is an urgent necessity to develop new antifungal agents to combat these mycoses. In this context, the aim of the present work was to investigate the effect of 1,10-phenanthroline-5,6-dione (phendione) and its metal-based derivatives [Ag(phendione)2]ClO4 = ([Ag(phendione)2]+) and [Cu(phendione)3](ClO4)2.4H2O = ([Cu(phendione)3]2+) on crucial physiological events of P. verrucosa conidial cells. Using the CLSI protocol, we have shown that phendione, [Ag(phendione)2]+ and [Cu(phendione)3]2+ were able to inhibit fungal proliferation, …

Rapid Turnover Of Ciliate Community Members In New England Tide Pools, Mary Badger, Sarah J. Tucker, Jean-David Grattepanche, Laura A. Katz

Biological Sciences: Faculty Publications

The rocky intertidal zone represents a dynamic habitat marked by considerable species richness, which has been well-documented for invertebrates and macroalgae. This high biodiversity exists in the context of extreme fluctuations in abiotic factors such as temperature, salinity and pH that occur during each tidal cycle. Despite these attributes, few studies have focused on microbial diversity in tide pools, including analyses of the ciliate communities that are the focus of this study. We investigated the spatial and temporal distributions of ciliate species across the intertidal environment at sites in Maine and Connecticut, USA. Our study used a DNA fingerprinting technique, …

Dissonance Reduction In Nonhuman Animals: Implications For Cognitive Dissonance Theory, Cindy Harmon-Jones, Nick Haslam, Brock Bastian

Animal Sentience

We review the evidence for dissonance reduction in nonhuman animals and examine the alternative explanations for these effects. If nonhuman animals engage in dissonance reduction, this supports the original theory as proposed by Festinger (1957) over the revisions to the theory that focused on the self-concept. Evidence of animal sentience, including dissonance reduction, may be a source of cognitive dissonance.

Clarifying Concepts In Cognitive Dissonance Theory, Eddie Harmon-Jones

Animal Sentience

This commentary on Zentall’s target article focuses primarily on clarifying some postulates and variables in cognitive dissonance theory. I discuss the adaptive motivational functions of dissonance arousal and dissonance reduction, and attempt to clarify some past dissonance experiments and to tease apart a dissonance theory and contrast explanation of effort-justification-type effects. The evidence and arguments reviewed here support the explanatory power of cognitive dissonance theory in a wide variety of circumstances in human and nonhuman animals, but they depend on first defining concepts such as “cognitions” quite broadly, as Festinger did when he originally proposed the theory.

The Potential For Sentience In Fishes, Jay R. Stauffer Jr.

Animal Sentience

Balcombe’s book is filled with information on the biology, behavior, and life history of fishes. I do not agree with all his premises. I am still somewhat perplexed about the discussion of whether fish feel pain; I am not sure whether the distinction between nociception and pain makes any difference. Overall, however, his treatment of the principles of both natural and sexual selection is comprehensive and accurate, and has greatly increased my knowledge and awareness of the biology, ethology, and potential for sentience in fishes. In summary, this work has exposed me to new ideas about how to examine fishes …

Identification Of Proteins Differentially Accumulated In Enterococcus Faecalis Under Acrylamide Exposure, Aleksandra Bocian, Konrad Hus, Marcin Jaromin, Miroslaw Tyrka, Andrzej Lyskowski

Turkish Journal of Biology

Analysis of bacterial proteomes can be used to obtain large amounts of information about adaptive microbial mechanisms to changing extracellular conditions. In the past, many bacterial species with the ability to degrade acrylamide were isolated. In this study differences in the Enterococcus faecalis proteome upon acrylamide exposure were investigated. We revealed substantial changes in the proteome of bacteria cultured in different environmental conditions. Microorganisms exposed to acrylamide showed higher accumulation of proteins associated with energy metabolism and its regulation. Moreover, several proteins involved in protection of cells from stress conditions were also identified. These biomacromolecules are involved in proper folding …

Converted Carotenoid Production In Dunaliella Salina By Using Cyclization Inhibitors 2-Methylimidazole And 3-Amino-1,2,4-Triazole, Arzu Yildirim, İsmai̇l Hakki Akgün, Meltem Dalay

Turkish Journal of Biology

Carotenoids are vital for most photosynthetic organisms because of their crucial role in prevention of the damage caused by excess light or stress conditions like heat or nutrient deprivation. Some of them are also valuable for biotechnology wıth respect to their colorful feature and antioxidant properties. In this study, a natural β-carotene producer, green microalga Dunaliella salina, was evaluated for its potential to produce different valuable carotenoids through the inhibition of cyclization reactions in the carotenoid pathway by the chemical inhibitors 2-methylimidazole (2MI) and 3-amino-1,2,4-triazole (Amitrol). 2MI was shown to be effective on lutein accumulation in D. salina cultures grown …

Cotesia Icipe Sp. N., A New Microgastrinae Wasp (Hymenoptera, Braconidae) Of Importance In The Biological Control Of Lepidopteran Pests In Africa, Komi K.M. Fiaboe, Jose Fernández-Triana, Faith W. Nyamu, Komi M. Agbodzavu

All Peer-Reviewed Publications

A new species of Microgastrinae, Cotesia icipe Fernández-Triana & Fiaboe, sp. n., is described from eastern Africa. It was reared in Kenya as a solitary parasitoid from two major amaranth pests, Spodoptera littoralis (Boisduval, 1833) and S. exigua (Hübner, 1808); study of specimens in collections also revealed its presence in four other countries in the Afrotropical region (Madagascar, Saudi Arabia, South Africa, and Yemen). Morphological, molecular and biological characters are used to describe the new species and to distinguish it from all 12 previously described species of Afrotropical Cotesia. Cotesia icipe shows potential in the biological control of key Lepidopteran …

Dna Barcodes, Expanded Distribution, And Redescription Of Apanteles Hemara Nixon, 1965 (Hymenoptera, Braconidae, Microgastrinae), A Potential Biocontrol Species Against Amaranth Leaf-Webbers In Africa, Jose Fernandez-Triana, Melanie Beaudin, Kees Van Achterberg, Mawufe K. Agbodzavu, Stephen T.O. Othim, Faith W. Nyamu, Komi K.M. Fiaboe

All Peer-Reviewed Publications

The microgastrine parasitoid wasp Apanteles hemara Nixon, 1965, is currently being considered as a potential biocontrol agent of amaranth leaf-webber pests in Africa. To facilitate future research and identification of the species, we characterize it from an integrative taxonomy perspective by providing a comprehensive morphological redescription, extensive illustrations (including the first images of the holotype), DNA barcodes, wasp biology, host data (Choreutidae and Crambidae caterpillars), and updated geographical distribution of the species (including eight new country records). Despite a wide distribution across four major biogeographical regions (mostly within the Old World tropics), the species seems to be relatively uniform from …

Effects Of Silvopasture Establishment On Aqueous And Gaseous Soil N Losses At The University Of New Hampshire Organic Dairy Research Farm, Kathryn Ann Slebodnik

Honors Theses and Capstones

The expansion of local agriculture in the New England region is putting increased pressure on farmers to expand their arable land base. While clear-cutting is a traditional method of converting forested land to agriculture, it is known for having adverse ecological impacts. To minimize these impacts, farmers can create a silvopasture which incorporates a portion of the original forest canopy into pastures or crop fields. This study evaluates the impact of land-use changes for agriculture on soil nitrogen (N) retention. In particular, this study investigates the differences in soil N turnover, gaseous loss, and aqueous loss among an established forest, …

More Than Food: An Analysis Of Multidimensional Relationships In Our Food System, Jessica Erin Newnan

Honors Theses and Capstones

Food is an integral part of everyday life for human beings, thus meriting particular attention from research and education. Looking further in depth at the factors that influence food, it becomes apparent that this is a complex topic that is related to several systems within the constructs of society. Here, the food system is approached with the understanding that several systems influence food consumption options and decisions including the agricultural, economic, education, energy, health, and political systems. To identify the relationships more closely, a three-dimensional model was built to represent the food system and depict several key factors, their relationships, …

Daily Distance Moved And Home Range Analysis Of Female Cheetahs On Namibia's Commercial Farmland, Elisabeth Nicole Wise

Honors Theses and Capstones

Fewer then 10,000 cheetahs remain in Sub-Saharan Africa. Namibia has the largest population, estimated to be 4,000. Habitat fragmentation and prey depletion from human expansion for agriculture has pushed 90% of cheetahs to reside on commercial farmland where there is an absence of larger predators. Radio telemetry was used to investigate the seasonal variation in home range size among nine female cheetahs on commercial farmlands on or near the Cheetah Conservation Fund in Otjiwarongo, Namibia. ArcGIS 10.3 and Geospatial Modeling Environment were used to calculate the overall and core home range size. This was estimated for the overall, annual, monthly, …

Characterizing Food Selectivity In Children With Autism, Samantha H. Wohlmacher

Honors Theses and Capstones

Food selectivity or “picky eating” affects a large percentage of children on the autism spectrum and as a result can have negative impacts on a child’s health and nutritional status (Cermak, Curtin, & Bandini, 2010). Few studies compare food selectivity in children on the autism spectrum to children with other developmental issues. Such a comparison may reveal how food selectivity presents itself uniquely in children on the autism spectrum. This study examined data from past health records collected from the Seacoast Childhood Development Center (SCDC). Thirty-eight children whose parents were concerned about their diets were taken from a larger sample …

Effects Of Equine Assisted Activities And Therapies On Equine Stress And Welfare, Sarah Jean Reega

Honors Theses and Capstones

Equine assisted activities and therapies (EAATs) are becoming an increasingly popular approach for therapy, therapeutic recreation, and learning for a broad range of human clients and participants. In the EAAT field, most research has been human-centric, focusing primarily on benefits of EAATs for participants and clients. Relatively little research has been conducted on the effects of EAATs on equine stress and welfare for equines engaged in EAAT sessions.

The effects of equine assisted activities and therapies on equine stress and welfare were studied by way of exploring current EAAT professionals’ experiences and views related to equine stress and welfare in …

Assessment Of The Intake And Knowledge Of Folate/Folic Acid Among Unh Students, Jessica Lee Pelletier, Ruth Reilly, Sherman Bigornia

Honors Theses and Capstones

There are 3,000 U.S. pregnancies affected by spina bifida and anencephaly annually. If women consume adequate amounts of folic acid (400 mcg/day) one month before pregnancy and through the first trimester, then the risk of their infant developing a neural tube defect (NTD) is reduced by 50-70%. However, approximately 50% of pregnancies are unplanned, with some of the highest rates among 18-24 year olds. The purpose of this study was to evaluate the knowledge source, knowledge level, and intake of folic acid among college-aged students. Qualtrics surveys from 96 subjects (87.5% female, aged 18-24) were used for analysis. In the …

Nutritional Labelling Providing Education On Its Usage Could It Impact On Patient's Food Choice Selection For Those In The Obese Classification?, Celia Lane

Theses

A build-up of too much body fat can cause significant health risks and development of medical conditions and disabilities (National Institute Clinical Excellence (NICE), 2014). The causes of obesity involve the disproportionate intake of calories that are not utilised (World Health Organisation (WHO), 2016). The rising trend towards obesity threatens to bankrupt medical systems (Heifer and Shultz, 2014). There has been a heighten awareness from the general public in the last decade of the affiliation between health and nutrition (Irish Universities Nutrition Alliance (lUNA), 2011). In light of the ever increasing obesity trend, individuals still desire to take control of …

Economic Viability Of Direct Drilling In Ireland Compared To Conventional Drilling, Angus Griffith

Theses

With the price of fuel rising and the need for farmers to try and cut costs, and not just variable and the input cost of producing the crop need to be reduced too. It is for this reason that this project is going to focus on direct drilling (DD) vs. conventional tillage (CT) which is the most common system of production in Ireland while also looking into the difference in the costs of establishing each of the two methods. In addition, this project will determine whether or not there are any differences in soil quality and conditions as well as …

Farm Deaths And Injuries: Changing Farmer Attitudes And Behaviour On Farm Safety, Kieran O'Connell

Theses

While the Irish agricultural sector accounts for just 6% of the working population of Ireland, it consistently has the highest proportion of fatal incidents of any sector - generally ranging from between 35% and 45% of all workplace fatalities in any given year (Health and Safety Authority, 2015). This was again evident in 2014 where 55% (30 of the 56) of the fatal workplace incidents were in the agricultural sector (Health and Safety Authority, 2015). Agriculture has an ageing workforce with the average age of an Irish farmer now standing at fifty-seven and farmers are eight times more likely to …

Genetic Markers In Circulating Tumour Cells As A Measure Of The Metastatic Propensity Of Uveal Melanoma, Aaron Beasley

Theses: Doctorates and Masters

Background: Uveal melanoma (UM) is an extremely aggressive disease with approximately 50% of patients developing incurable metastatic disease. Therefore, accurate prognosis of a patient is necessary for closer follow up and the earlier implementation of systemic adjuvant therapies in those most likely to develop metastatic disease. Fortunately, UM can be classified into two distinct molecular classes based on clinically validated gene expression profiling, chromosomal aberrations and specific driver mutations, which accurately predict the metastatic propensity of the primary tumour. However, genetic testing currently requires biopsy of the eye which can lead to serious complications including permanent blindness. Therefore, an alternative …

Food Insecurity And Fruit And Vegetable Consumption Among Regional And Remote Western Australian Children: Determinants, Prevalence And Predictors, Stephanie Louise Godrich

Theses: Doctorates and Masters

Living in a community with adequate availability of nutritious food, and the capacity to access and utilise it, are key food security determinants (FSD). However, inequities relating to these determinants exist between regional and remote Western Australian (WA) communities, particularly regarding fruit and vegetables (F&V). This negatively impacts vulnerable populations, especially children. In order to understand determinants, prevalence and predictors of F&V and food security (FS), three concepts were explored in this PhD; (1) F&V consumption among regional and remote WA children (including determinants of F&V consumption, quantities, types, varieties of F&V consumed); (2) FS among regional and remote WA …

Investigating The Effects Of Changes In Light Quality On Different Life History Stages Of Seagrasses, Simone Strydom

Theses: Doctorates and Masters

Seagrass meadows provide crucial ecosystem services to the coastal zone but globally are threatened. Seagrass loss to date has mainly been attributed to anthropogenic activities that reduce light quantity, such as dredging, declining water quality from urban and agricultural run-off and eutrophication. However, light quality (wavelengths of light) is also altered by these anthropogenic stressors as well as natural events. This study consisted of three main components: (1) characterising light quality to which seagrasses are exposed across a local natural estuarine-ocean gradient and with a human impact pressure; (2) the influence of monochromatic light quality (blue λ=451 nm; green λ=522 …

Characterization Of Phytocystatin-Like Cysteine Protease Inhibitors Of Trichomonas Vaginalis, Ryan Michael John Faucher

University of the Pacific Theses and Dissertations

Trichomoniasis is a common STD caused by the parasitic protozoan Trichomonas vaginalis. The parasite is estimated to have infected roughly 3.7 million Americans. Complications from trichomoniasis can lead to cervical cancer in women and prostate cancer in men. One of the mechanisms of the parasite employs is using cysteine proteases to break down the cellular matrix of its host. However, three endogenous phytocystatin-like protease inhibitors have been found within the parasite’s genome. By recombinantly expressing these cystatins we have been able to test their ability to inhibit cysteine proteases such as papain and those found in T. vaginalis to find …

Isolating The Targets Of Six Transcription Factor In Ephydatia Muelleri And Identifying The Role Of The Superoxide Dismutase 6 In Host Immune Response To Trichomonas Vaginalis, Gurbir Kaur Gudial

University of the Pacific Theses and Dissertations

Sponges are the descendants of the oldest members of the metazoan phylogenetic lineage and their genome contains animal specific genes but lack true tissues, organ systems, and neurons. Thus, the sponge model system can be used to elucidate origin of developmental processes. The PSED (RDGN) network (Pax/Six/Eya/Dac) is important in development of eyes, muscles, and other structures in Bilaterians. Similarly, sponges contain a precursor Pax-Six gene network. The Ephydatia muelleri (Em) PaxB protein binds to a

Pax2/5/8 consensus sequence site and two cis-regulatory elements upstream and one intron sequence of EmSix1/2 (Rivera et al., 2013).

This study aimed to determine …