Rates Of Diagenesis Of Tropical Insectivorous Bat Guano Accumulations: Implications For Potential Paleoenvironmental Reconstruction, 2024 The Claremont Colleges, Claremont, USA
Rates Of Diagenesis Of Tropical Insectivorous Bat Guano Accumulations: Implications For Potential Paleoenvironmental Reconstruction, Donald A. Mcfarlane, Joyce Lundberg
International Journal of Speleology
Cave guano deposits are increasingly being recognized as valuable repositories of paleo-climatic and paleo-environmental information. However, that value is constrained by rates of guano decomposition, and these rates have not been previously well-studied. Here we show that field and laboratory studies of deep insectivorous bat guano sequences in the caves of Borneo demonstrate the extreme dependence of decomposition rate on guano water content. Under tropical conditions, moist guanos exhibit decomposition coefficients (k) values of ~ 0.01, implying the loss of most of the organic content on decadal timescales. Under similar temperatures but drier conditions, k values drop to …
Towards Sociobiogeochemistry: Critical Perspectives On Anthropogenic Alterations To Soil Nitrogen Chemistry Via U.S. Urban And Suburban Development, 2024 The Graduate Center, City University of New York
Towards Sociobiogeochemistry: Critical Perspectives On Anthropogenic Alterations To Soil Nitrogen Chemistry Via U.S. Urban And Suburban Development, Christopher D. Ryan
Dissertations, Theses, and Capstone Projects
The ecological impacts of changes to land use are relevant to concerns about climate change, eutrophication of waterbodies, and reductions in biodiversity. As a foundational component of ecosystem functioning, changes to soil biogeochemistry have significant effects on overall ecosystem health. With cities continuing to grow and develop in extent, the impacts of urbanization and suburbanization on soils are of particular concern. Despite a wide range of natural climatic and geologic conditions, several factors have driven similar patterns of land transformation and management across the United States. In particular, federal initiatives including the Home Owners Loan Corporation, the Federal Housing Administration, …
Permafrost Carbon: Progress On Understanding Stocks And Fluxes Across Northern Terrestrial Ecosystems, 2024 Alfred Wegener Institute Helmholtz Center for Polar and Marine Research
Permafrost Carbon: Progress On Understanding Stocks And Fluxes Across Northern Terrestrial Ecosystems, Claire C. Treat, Anna-Maria Virkkala, Eleanor Burke, Lori Bruhwiler, Abhishek Chatterjee, Joshua B. Fisher, Josh Hashemi, Frans-Jan W. Parmentier, Brendan M. Rogers, Sebastian Westermann, Jennifer D. Watts, Elena Blanc-Betes, Matthias Fuchs, Stefan Kruse, Avni Malhotra, Kimberley Miner, Jens Strauss, Amanda Armstrong, Howard E. Epstein, Bradley Gay, Mathias Goeckede, Aram Kalhori, Dan Kou, Charles E. Miller, Susan M. Natali, Youmi Oh, Sarah Shakil, Oliver Sonnentag, Ruth K. Varner, Scott Zolkos, Edward A.G. Schuur, Gustaf Hugelius
Biology, Chemistry, and Environmental Sciences Faculty Articles and Research
Significant progress in permafrost carbon science made over the past decades include the identification of vast permafrost carbon stocks, the development of new pan-Arctic permafrost maps, an increase in terrestrial measurement sites for CO2 and methane fluxes, and important factors affecting carbon cycling, including vegetation changes, periods of soil freezing and thawing, wildfire, and other disturbance events. Process-based modeling studies now include key elements of permafrost carbon cycling and advances in statistical modeling and inverse modeling enhance understanding of permafrost region C budgets. By combining existing data syntheses and model outputs, the permafrost region is likely a wetland methane …
Reducing Food Scarcity: The Benefits Of Urban Farming, 2023 Brigham Young University
Reducing Food Scarcity: The Benefits Of Urban Farming, S.A. Claudell, Emilio Mejia
Journal of Nonprofit Innovation
Urban farming can enhance the lives of communities and help reduce food scarcity. This paper presents a conceptual prototype of an efficient urban farming community that can be scaled for a single apartment building or an entire community across all global geoeconomics regions, including densely populated cities and rural, developing towns and communities. When deployed in coordination with smart crop choices, local farm support, and efficient transportation then the result isn’t just sustainability, but also increasing fresh produce accessibility, optimizing nutritional value, eliminating the use of ‘forever chemicals’, reducing transportation costs, and fostering global environmental benefits.
Imagine Doris, who is …
Wonderstone And Its Connection To Liesegang, Microbes, And Beyond, 2023 University of Nebraska-Lincoln
Wonderstone And Its Connection To Liesegang, Microbes, And Beyond, Haden S. Mandery
Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research
In the western and southwestern United States, the term wonderstone is used to describe volcanic, volcaniclastic, and sedimentary rocks with variegated banding produced by iron oxide mineralization or staining. This iron oxide mineralization is typically described as Liesegang banding. In this paper I will (1) test if the banding in wonderstone follows the spacing and width laws characteristic of Liesegang, (2) identify the source of iron that ultimately precipitated in the bands, and (3) examine the role that microbes played in the formation of the mineralization in these rocks. I conclude that the iron oxide mineralization is not Liesegang banding. …
Exploring Soil Microbial Dynamics In Southern Appalachian Forests: A Systems Biology Approach To Prescribed Fire Impacts, 2023 University of Tennessee, Knoxville
Exploring Soil Microbial Dynamics In Southern Appalachian Forests: A Systems Biology Approach To Prescribed Fire Impacts, Saad Abd Ar Rafie
Doctoral Dissertations
Prescribed fires in Southern Appalachian forests are vital in ecosystem management and wildfire risk mitigation. However, understanding the intricate dynamics between these fires, soil microbial communities, and overall ecosystem health remains challenging. This dissertation addresses this knowledge gap by exploring selected aspects of this complex relationship across three interconnected chapters.
The first chapter investigates the immediate effects of prescribed fires on soil microbial communities. It reveals subtle shifts in porewater chemistry and significant increases in microbial species richness. These findings offer valuable insights into the interplay between soil properties and microbial responses during the early stages following a prescribed fire. …
Enhancing Our Understanding Of Ancient Oceans Through The Investigation Of Molybdenum Behavior Under Sulfidic Conditions, 2023 University of Texas at El Paso
Enhancing Our Understanding Of Ancient Oceans Through The Investigation Of Molybdenum Behavior Under Sulfidic Conditions, Rachel Faye Phillips
Open Access Theses & Dissertations
The most abundant trace metal in the ocean today, molybdenum (Mo), exhibits distinct behavior in oxygenated water, where it remains predominantly dissolved, compared to euxinic (i.e., oxygen-free and sulfidic) water, in which it is sequestered into the sediment. This dissimilar behavior allows us to use Mo concentrations and isotopic compositions in sediment to reconstruct marine oxygenation conditions throughout geologic history. However, Mo sequestration mechanisms under euxinic conditions remain unresolved, which limits the accuracy and precision of reconstructions made using Mo signatures in the rock record. For my doctoral research, I experimentally investigated abiotic and biotic Mo sequestration mechanisms under various …
Quantifying The Role Of Water Quality On Nitrogen Cycling In A Trophic Estuary, 2023 Kennesaw State University
Quantifying The Role Of Water Quality On Nitrogen Cycling In A Trophic Estuary, Kayla Gonzalez-Boy
Symposium of Student Scholars
Jobos Bay Estuary is an intertidal, tropical estuary located in southern Puerto Rico. The estuary covers about 12 km2 and has a variety of habitats, such as seagrass beds, mangroves, mud flats, and coral reefs, which play important roles in sediment trapping and water quality maintenance. Seagrasses also serve as nursery and feeding grounds and provide shelter for macrofauna. Currently, the role of seagrasses and water quality on nitrogen (N) cycling in trophic estuaries is not well constrained. Understanding variations in sediment-based effects on N cycling rates and transformations, and how they are associated with water quality, is an …
Sources And Controls Of Carbon Dioxide In Inland Waters At Watershed, Regional, And Continental Scales, 2023 University of Massachusetts Amherst
Sources And Controls Of Carbon Dioxide In Inland Waters At Watershed, Regional, And Continental Scales, Brian Saccardi
Doctoral Dissertations
Inland waters are significant sources of carbon dioxide to the atmosphere, and estimates of emissions are similar in magnitude to those of the carbon dioxide sequestered by the net terrestrial sink. Currently, methods of estimating carbon dioxide emissions are based on statistical approaches and often do not consider landscape attributes such as human development, agriculture, or the hydrologic connectivity of the stream network. The following research addresses these issues in chapter 1 by developing and validating a reactive transport model at the watershed scale, then in chapter 2 by applying the reactive transport model at the continental scale across US …
Reply To: Beyond Microbial Carbon Use Efficiency, 2023 Cornell University
Reply To: Beyond Microbial Carbon Use Efficiency, Feng Tao, Johannes Lehmann, Ying-Ping Wang, Lifen Jiang, Bernhard Ahrens, Kostiantyn Viatkin, Stefano Manzoni, Benjamin Z. Houlton, Yuanyuan Huang, Bruce A. Hungate, Serita D. Frey, Michael W. I. Schmidt, Markus Reichstein, Nuno Carvalhais, Philippe Ciais, Umakant Mishra, Gustaf Hugelius, Toby D. Hocking, Xingjie Lu, Zheng Shi, Ronald Vargas, Yusuf Yigini, Christian Omuto, Ashish A. Malik, Guillermo Peralta, Rosa Cuevas-Corona, Luciano E. Di Paolo, Isabel Luotto, Cuijuan Liao, Yi-Shuang Liang, Vinisa S. Saynes, Xiaomeng Huang
Faculty Publications
In their commentary, Xiao et al. cautioned that the conclusions on the critical role of microbial carbon use efficiency (CUE) in global soil organic carbon (SOC) storage in a paper by Tao et al. (2023) might be too simplistic. They claimed that Tao et al.’s study lacked mechanistic consideration of SOC formation and excluded important datasets. Xiao et al. brought up important points, which can be largely reconciled with our findings by understanding the differences in expressing processes in empirical studies and in models.
Short-Term Versus Long-Term Effects Of Nitrogen Addition And Warming On Ecosystem N Dynamics In A Grass-Dominated Temperate Old Field, 2023 Western University
Short-Term Versus Long-Term Effects Of Nitrogen Addition And Warming On Ecosystem N Dynamics In A Grass-Dominated Temperate Old Field, Benjamin F. A. Souriol
Electronic Thesis and Dissertation Repository
Increased atmospheric nitrogen (N) deposition and climate warming are both anticipated to influence the ecosystem N dynamics of northern temperate ecosystems substantially over the next century. Nevertheless, in field experiments with N addition and warming treatments, temporal scale can play an important role in determining the extent of treatment effects on N dynamics, and it is unclear to what extent the results of short-term studies can be extrapolated to responses over longer time scales. I compared the short-term versus long-term effects of N addition and warming on net N mineralization, N leaching, and N retention in a grass-dominated old field. …
A New View Of Chlorophyll Dynamics In The Southern Mid-Atlantic Bight From A Two-Year High-Resolution Spray Glider Survey, 2023 Old Dominion University
A New View Of Chlorophyll Dynamics In The Southern Mid-Atlantic Bight From A Two-Year High-Resolution Spray Glider Survey, Francesco Lane
OES Theses and Dissertations
The southern Mid-Atlantic Bight (MAB) near Cape Hatteras, NC, USA, is likely a hotspot for the episodic export of carbon-rich shelf waters to the open ocean. Over a 2 year period, from March 2017 to May 2019, Spray gliders repeatedly occupied transects, along the slope and across the shelf, generating high-resolution chlorophyll fluorescence (fChl) data in the southern MAB. This study implements an fChl calibration method utilizing remotely sensing ocean color as a standard. We validate the method’s utility by demonstrating a reduction in post-calibration cross-mission fChl variability and demonstrating close correspondence between the calibrated fChl data and an in …
Thermal And Fluid Evolution Of The Clearwater West Impact-Generated Hydrothermal System, Quebec, And Associated Astrobiological Implications, 2023 Western University
Thermal And Fluid Evolution Of The Clearwater West Impact-Generated Hydrothermal System, Quebec, And Associated Astrobiological Implications, Daliah R. Bibas
Electronic Thesis and Dissertation Repository
Impact-generated hydrothermal systems result from interactions between a permeable substrate, an impact-generated heat source, and fluids (e.g., H2O). A comprehensive understanding of the evolution of these terrestrial features has significant implications in the search for habitable environments on Mars, a focus in the emerging field of astrobiology. This thesis presents a detailed case study of the impact-generated hydrothermal alteration of impactites at the Clearwater West impact structure, Quebec, focusing on hydrothermally precipitated quartz vugs in crater-fill impact melt rocks. Sample analysis included optical microscopy, electron microprobe analysis, mass spectrometry, and fluid inclusion microthermometry. Results show 3 main quartz …
Approaches To Assessing Nutrient Coupling In Open Ocean Datasets, 2023 Humboldt State University
Approaches To Assessing Nutrient Coupling In Open Ocean Datasets, James M. Moore, Claire P. Till
IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt
Nutrient coupling describes a process where the biogeochemical cycles of two elements are linked by being incorporated similarly into biomass. This paper uses data from the GEOTRACES GP16 cruise (Eastern Pacific Zonal Transect) to investigate the relationship between certain macronutrients generally coupled to trace elements in terms of their oceanic distributions with the notable exception of in an oxygen minimum zone: cadmium-phosphate and zinc-silicate. There are many methods applied to oceanographic data to correlate analyte concentrations; while they are often presented independently in literature, here we attempt to use them in conjunction for a more thorough interpretation. By compiling 1) …
What Is Microbial Dormancy, 2023 Argonne National Laboratory
What Is Microbial Dormancy, Mark D. Mcdonald, Carlos Owusu-Ansah, Jared B. Ellenbogen, Zachary D. Malone, Michael P. Ricketts, Steve E. Frolking, Jessica G. Ernakovich, Michael Ibba, Sarah C. Bagby, J. L. Weissman
Faculty Publications
Life can be stressful. One way to deal with stress is to simply wait it out. Microbes do this by entering a state of reduced activity and increased resistance commonly called ‘dormancy’. But what is dormancy? Different scientific disciplines emphasize distinct traits and phenotypic ranges in defining dormancy for their microbial species and system-specific questions of interest. Here, we propose a unified definition of microbial dormancy, using a broad framework to place earlier discipline-specific definitions in a new context. We then discuss how this new definition and framework may improve our ability to investigate dormancy using multi-omics tools. Finally, we …
Reply To: Contribution Of Carbon Inputs To Soil Carbon Accumulation Cannot Be Neglected, 2023 Tsinghua University
Reply To: Contribution Of Carbon Inputs To Soil Carbon Accumulation Cannot Be Neglected, Feng Tao, Benjamin Z. Houlton, Serita D. Frey, Johannes Lehmann, Stefano Manzoni, Yuanyuan Huang, Lifen Jiang, Umakant Mishra, Bruce A. Hungate, Michael W. I. Schmidt, Markus Reichstein, Nuno Carvalhais, Philippe Ciais, Ying-Ping Wang, Bernhard Ahrens, Gustaf Hugelius, Toby D. Hocking, Xingjie Lu, Zheng Shi, Kostiantyn Viatkin, Ronald Vargas, Yusuf Yigini, Christian Omuto, Ashish A. Malik, Guillermo Peralta, Rosa Cuevas-Corona, Luciano E. Di Paolo, Isabel Luotto, Cuijuan Liao, Yi-Shuang Liang, Vinisa S. Saynes, Xiaomeng Huang, Yiqi Luo
Faculty Publications
In the accompanying Comment1, He et al. argue that the determinant role of microbial carbon use efficiency in global soil organic carbon (SOC) storage shown in Tao et al. (2023)2 was overestimated because carbon inputs were neglected in our data analysis while they suggest that our model-based analysis could be biased and model-dependent. Their argument is based on a different choice of independent variables in the data analysis and a sensitivity analysis of two process-based models other than that used in our study. We agree that both carbon inputs and outputs (as mediated by microbial processes) matter when predicting SOC …
The Upper Ocean At The End Of An Ice Age: Using Proxies In Benthic Foraminifera To Investigate Intermediate Water Changes During The Last Glacial Termination, 2023 University of Maine
The Upper Ocean At The End Of An Ice Age: Using Proxies In Benthic Foraminifera To Investigate Intermediate Water Changes During The Last Glacial Termination, Cassandre R. Stirpe
Electronic Theses and Dissertations
The ocean is an important component of the global climate system and plays a key role as a storage reservoir for heat and carbon. Under glacial conditions, the ocean sequestered carbon from the atmosphere, contributing to a cooler global climate. During the last glacial termination, that carbon was released back into the atmosphere, but the exact timing and mechanisms of this transfer are still not fully understood. This study examines waters from the intermediate depths of the Southern Ocean to gain insight into deglacial processes. Intermediate waters are capable of reacting to climate change on decadal timescales, making them a …
Season, Not Long-Term Warming, Affects The Relationship Between Ecosystem Function And Microbial Diversity, 2023 University of Massachusetts
Season, Not Long-Term Warming, Affects The Relationship Between Ecosystem Function And Microbial Diversity, Melissa S. Shinfuku, Luiz A. Domeignoz-Horta, Mallory J. Choudoir, Serita D. Frey, Kristen M. Deangelis
Faculty Publications
Across biomes, soil biodiversity promotes ecosystem functions. However, whether this relationship will be maintained under climate change is uncertain. Here, using two long-term warming experiments, we investigated how warming affects the relationship between ecosystem functions and microbial diversity across seasons, soil horizons, and warming duration. The soils in these warming experiments were heated +5 °C above ambient for 13 or 28 years. We measured seven different ecosystem functions representative of soil carbon cycling, soil nitrogen cycling, or nutrient pools. We also surveyed bacterial and fungal community diversity. We found that the relationship between ecosystem function and bacterial diversity and the …
Design Of Stormwater Bmps For Surface And Groundwater Protection Based On Site-Scale Soil Properties: Phase I, 2023 University of Central Florida
Design Of Stormwater Bmps For Surface And Groundwater Protection Based On Site-Scale Soil Properties: Phase I, Kelly Kibler, Lisa Chambers, Melanie Beazley
Florida DOT
Much of Earth’s nutrient cycling takes place in soils. Characteristics of soils control physical, chemical, and biological processes that determine rates of nutrient fluxes, storage, or transformation. As remediation of excess nutrients in stormwater runoff is one function of stormwater Best Management Practices (BMPs), the soil profile constitutes one of the most important factors of BMP design. Variation observed in BMP effectiveness (e.g., why one BMP design works effectively in one place and not another) can often be explained by variations in the soil profile, either through direct means or by a soil’s influence on hydraulics of stormwater flow through …
Metagenomic Investigation Of Microbial Dark Carbon Fixation, Viral Interactions, And Horizonal Gene Transfer Within A Convergent Margin Subsurface Ecosystem, 2023 University of Tennessee, Knoxville
Metagenomic Investigation Of Microbial Dark Carbon Fixation, Viral Interactions, And Horizonal Gene Transfer Within A Convergent Margin Subsurface Ecosystem, Timothy Joseph Rogers
Doctoral Dissertations
Convergent margins are geological regions where two or more tectonic plates collide, and the denser “subducting slab” is pushed beneath the less dense overriding plate. As the slab descends, it devolatilizes under higher temperatures and pressures, allowing dissolved inorganic carbon (DIC) and redox active volatile rich fluids to cycle between the upper crust and Earth’s mantle. These fluids migrate through cracks and fissures in the upper mantle and crust, fueling chemolithoautotrophy-based microbial ecosystems in the subsurface before they are expelled on the surface in the form of hydrothermal seeps and springs. Chemolithoautotrophic ecosystems, such as those in the Costa Rican …