Biology Commons^™

Lyme Disease Ecology In The Eastern United States: An Overview, Aliya C. Aguirre

Biology Student Work

Lyme disease is the most common vector-borne disease in the United States of America (USA). In North America, Lyme disease is caused by Borrelia burgdorferi sensu stricto (s.s.) and vectored by the blacklegged tick, Ixodes scapularis. Historically, Lyme disease has been primarily restricted to the northeastern United States, despite I. scapularis occurring throughout the entire eastern region. There are genetically unique northern and southern populations of I. scapularis. The differences between these two populations have been hypothesized to be driving the difference in Lyme disease case incidence in the northeastern and southeastern United States. This review will examine …

Editorial: Volume Ii: Fibrotic Tissue Remodeling As A Driver Of Disease Pathogenesis, Arkadeep Mitra, Sarika Saraswati, Trayambak Basak

Biology Faculty Research

No abstract provided.

The Impact Of Maternal Thyroid Dysfunction During Pregnancy On Fetal Development, Ariella Eisig

The Science Journal of the Lander College of Arts and Sciences

Thyroid dysfunction during pregnancy significantly impacts both maternal and fetal health, posing physical and neuropsychological development risks for the neonate. This paper reviews the mechanism of thyroid function, the etiology, screening for hypothyroidism and hyperthyroidism, and the effects on fetal development and pregnancy outcomes. Multiple studies have shown that maternal thyroid dysfunction can lead to various complications such as IUGR, preterm birth, neonatal Grave’s disease, and adverse neuropsychological outcomes in children. Proper screening, monitoring, and management of maternal thyroid function are essential to lessen these risks and ensure optimal fetal development. Further research is warranted to better understand the complex …

Fungal Endophytes In Native Prairie Plants Vs. Lespedeza Cuneata, Ilyana Martinez, Ilana Fay Zeitzer, Noah Brown, Anthony Yannarell

Parkland Science Scholars

Fungal leaf endophytes(FLE) are microorganisms that live in the leaf tissues of plants, influencing plant health, growth, and stress resistance. The prairie ecosystem, with its diverse flora, provides an ideal environment for studying the symbiotic relationships between endophytes and plants.

In recent years, the invasive species Lespedeza cuneata has become increasingly prevalent, continuously invading native prairie communities. The Phillips Tract Research Area (PHRE), a prairie established in 2018 for research purposes, has also been invaded by L. cuneata. PHRE was designed to investigate the impact of pesticide drift on prairie restoration. Despite various management efforts, L. cuneata has persistently invaded …

The Effects Of Habitat Characteristics And Location On Brook Trout Size Distribution, Bryce Groves

Journal of Earth and Life Science

Adfluvial Brook Trout Salvelinus fontinalis are known to typically grow larger than riverine Brook Trout. The Kabekona River in Hubbard County, Minnesota exhibits suitable habitat for both fluvial and adfluvial Brook Trout populations. The objective of this study was to analyze the relationships between depth, stream width, canopy cover, water temperature, sediment size, and distance from Kabekona Lake on Brook Trout size distribution in the Kabekona River. Brook Trout (n=35) were angled from the Kabekona River from August 24 to September 26, 2023. Each fish was measured and released, with habitat metrics being recorded at time of release. ArcGIS was …

Avian Extraembryonic Membranes Respond To Yolk Corticosterone Early In Development, Emily P. Harders, Mitch Agustin, Ryan T. Paitz

Faculty Publications – Biological Sciences

During times of maternal stress, developing embryos can be exposed to elevated levels of glucocorticoids which can affect development and permanently alter offspring phenotype. In placental species, the placenta mediates fetal exposure to maternal glucocorticoids via metabolism, yet the placenta itself responds to glucocorticoids to regulate offspring growth and development. In oviparous species, maternal glucocorticoids can be deposited into the egg yolk and are metabolized early in development. This metabolism is mediated by the extraembryonic membranes, but it is unknown if the extraembryonic membranes also respond to maternal glucocorticoids in a way comparable to the placenta. In this study, we …

Invasion Ecology Of Alternanthera Philoxeroides, Cyperus Blepharoleptos, Panicum Repens, And Triadica Sebifera, Samuel A. Schmid, Adrián Lázaro-Lobo, Cory M. Shoemaker, Andrew Sample, Mackenzie Cade, Gary N. Ervin, Gray Turnage

GRI Publications

Several invasion ecology hypotheses explain patterns of invasion, but these effects are often complex and multifaceted. Within the study of aquatic invasive species, small aquatic ecosystems are often neglected, despite them representing most global freshwater bodies. This study uses community composition and environmental and geographic factors to explain the occurrence of invasive species in small lakes in the southeastern United States. Specifically, this study predicted that several ecosystem factors would predict the probability of occurrence of invasive species of the lakes studied. Four of the most common invasive species were selected as the focus of this study: Alternanthera philoxeroides, Cyperus …

Translation Of: Trembley À Réaumur, Abraham Trembley, Morgan Mclaughlin

Biology: Student Scholarship & Creative Works

While examining a jar filled with aquatic plants and animals, Abraham Trembley, a young tutor working for Count William Bentinck in the Netherlands, noticed tiny, green, tube-shaped organisms attached to aquatic plants. Uncertain whether they were plants or animals, he devised a brilliant series of experiments to understand their biology. He observed them contract when disturbed and take steps towards a light, gathering in front of a chevron-shaped opening in a piece of cardboard. Nearly convinced they were animals, he cut one in half expecting to see it die. Instead, it regenerated two perfectly formed bodies from the severed halves. …

Coleoptera Of Brazil: What We Knew Then And What We Know Now. Insights From The Catálogo Taxonômico Da Fauna Do Brasil, Edilson Caron, Marcela L. Monné, Geoffrey Morse, Et Al.

Biology: Faculty Scholarship

In 2000, Cleide Costa published a paper presenting the state of knowledge of the Neotropical Coleopte ra, with a focus on the Brazilian fauna. Twenty-four years later, thanks to the development of the Coleoptera section of the Taxonomic Catalog of the Brazilian Fauna (CTFB - Catálogo Taxonômico da Fauna do Brasil) through the collaboration of 100 coleopterists from all over the globe, we can build on Costa’s work and present an updated overview of the state of knowledge of the beetles from Brazil. There are currently 35,699 species in 4,958 genera and 116 families known to occur in the country, …

An Overview Of The Brazilian Chrysomelidae (Insecta: Coleoptera): The Most Species-Rich Beetle Family In Brazil, Adelita M. Linzmeier, Luciano De A. Moura, Cibele S. Ribeiro-Costa, Daiara Manfio, Federico Agrain, Maria L. Chamorro, Geoffrey Morse, Renato Regalin, Lukáš Sekerka

Biology: Faculty Scholarship

The leaf beetles (Chrysomelidae) are one of the most species-rich family of herbivorous beetles with about 45,000 species worldwide. Based on the contributions of chrysomelidologists to the Taxonomic Catalog of the Brazilian Fauna - CTFB, the family comprises 6,079 species in 562 genera of which 951 species are endemic to Brazil, standing out as the most diverse, representing 4.8% of the Brazilian fauna and 17.1% of the beetle species. Chrysomelidae has twelve subfamilies with nine reported to Brazil: Galerucinae, the richest with 1,916 species in 202 genera, followed by Cassidinae, Eumolpinae, Cryptocephalinae, Chrysomelinae, Bruchinae, Criocerinae, Lamprosomatinae and Sagrinae - this …

How Does A Global Climate Cycle Affect The Reproductive Output Of A Neotropical Migratory Bird?, Abby K. Bressette, Emma Cummings, Daniel Albrecht-Mallinger, Lesley Bulluck

UROP Posters

El-Niño Southern Oscillation (ENSO) causes regional changes in climate and has been found to have varying effects on the survival, fecundity, and recruitment of migratory songbirds. This study seeks to better understand the effect of ENSO on the fecundity of Virginia-breeding Prothonotary warbler (Protonotaria citrea; PROW), a neotropical migratory songbird. PROW breed in the Eastern United States and spend the non-breeding season primarily in Panama and Colombia. Ongoing research in Virginia has found a positive relationship between spring precipitation and predicted number of PROW fledgelings during La Niña, but the opposite during El Niño. To better understand this relationship, we …

Carry-Over Effects Of Climate On Prothonotary Warbler (Protonotaria Citrea) Feather Quality, Alyssa N. Spasic, Dan Albrecht-Mallinger, Lesley Bulluck

UROP Posters

Avian species have inspired numerous studies on ornamentation, exploring its role in intra- and intersexual selection as a marker for individual quality. Male birds have been the focus of most of these studies while females, which can also display ornamentation, have been studied less. Coloration achieved through molt, particularly carotenoid-based pigments, requires energy derived from food resources. As climate affects insect abundance, there may be a link between climate conditions during molt and feather quality the following season. We assessed the relationship between temperature and precipitation during molt and female Prothonotary Warbler (Protonotaria citrea) breast and crown feather reflectance metrics …

Plaster Creek Stewards Curb-Cut Rain Garden Social Impacts Study, Eleanor Vander Ark, Laura Luchies

Watershed Reports

As one method of minimizing pollutants in Plaster Creek, Plaster Creek Stewards (PCS) has installed Curb-Cut Rain Gardens (CCRGs) in the downstream neighborhoods of the Plaster Creek Watershed. CCRGs sit in the parkway between the sidewalk and the street, are planted with native plants, and have a cut in the curb to allow the influx of rainwater from the street. These gardens divert polluted rainwater from the creek by catching the water closer to where it falls and allowing it to filter into the ground.

As part of a grant from the Michigan Department of Environment, Great Lakes, and Energy …

Hen-Durance Training—Effects Of An Exercise Regimen On Laying Hen Muscle Architecture And Fracture Prevalence, Grace A.T. Hong, Bret W. Tobalske, Nienke Van Staaveren, Emily M. Leishman, Tina M. Widowski, Donald R. Powers, Alexandra Harlander

Faculty Publications - Department of Biological & Molecular Science

Domestic chickens kept for egg laying navigate inclines such as ramps in some commercial housing systems to aid in transitions between housing tiers. Laying hens use their wings and hindlimbs in a locomotion called wing-assisted incline running (WAIR) to ascend steep inclines. There is a potential relationship between the strength of the main flight muscles and the health of the keel bone from which they originate. We sought to test the effects of a controlled, WAIR-based exercise regimen during rearing on keel bone health and muscle properties of white- and brown-feathered laying hens. The WAIR exercise regimen, which consisted of …

The Professional Identity Of Stem Faculty As Instructors Of Course-Based Research Experiences, Quinn Vega

Department of Biology Faculty Scholarship and Creative Works

The professional identity of scientists has historically been cultivated to value research over teaching, which can undermine initiatives that aim to reform science education. Course-Based Research Experiences (CRE) and the inclusive Research and Education Communities (iREC) are two successful and impactful reform efforts that integrate research and teaching. The aim of this study is to explicate the professional identity of instructors who implement a CRE within an established iREC and to explore how this identity contributes to the success of these programs. 97 CRE instructors from the Science Education Alliance (SEA) iREC participated in a 2-year, multi-stage, qualitative research project …

Managing Stress: A Study Of Stress Response Mechanisms In Mycobacteria, Augusto C. Hunt Serracin

Biology Dissertations - Archive

Mycobacteria encompass many pathogenic species known to cause severe disease in humans. A well-known example is Mycobacterium tuberculosis (Mtb), the causative agent of the lung disease tuberculosis, which kills millions of humans worldwide yearly. Pathogenic mycobacteria like Mtb are challenging to treat because of their innate ability to adapt to environmental stress. Their unique cell physiology and conserved stress responses allow them to combat biological insults, regulate growth, and regulate genes involved in stress; all these responses increase tolerance to antibiotics. The current therapies to treat mycobacterial infections are lengthy and, at times, unsuccessful, partly due to antibiotic tolerance. A …

Biogeographic Affiliation And Centers Of Richness As Predictors Of Elevational Range-Size Patterns For Malesian Flora, Melissa Whitman, Sabrina E. Russo

School of Biological Sciences: Faculty Publications

Our goal was to interrogate the idea that “mountain passes are higher in the tropics” by investigating ecological and biogeographic drivers of elevational range-sizes patterns among equatorial flora. We used herbarium records for 60 species-rich plant families, representing 18 535 species total, to estimate distributions over a 4500 m elevational gradient. For each family, we estimated the change in average range-sizes with increasing elevation (i.e. Rapoport's rule, abbreviated as ERR) and quantified 15 metrics of familial richness distribution, evolutionary age, and biogeographic affiliation. We visualized covariation across families using phylogenetic principal components analysis (pPCA). We then evaluated how family-level ERR …

Description Of Neoperla Philippinensis Sp. Nov. Confirmed Using Integrative Taxonomy And Some Notes On Neoperla Oculata Banks, 1924 (Plecoptera: Perlidae), Arthien Lovell P. Pelingen

Biology Faculty Publications

I re-examine the assumed phenotypic variable Neoperla oculata Banks, 1924 (Plecoptera, Perlidae) and describe Neoperla philippinensis sp. nov. All material examined herein are collections from the Mindanao region, of which supplementary information were provided including COI mtDNA accessions, female adult associations, and egg morphology characterization.

Incorporating Sex-Diverse And Gender-Inclusive Perspectives In Higher Education Biology Courses, Breanne N. Harris, A Kelsey Lewis, Sam L. Sharpe, Teri J. Orr, Christopher T. Martine, Chloe C. Josefson

Faculty Journal Articles

Inclusive teaching is teaching in a way that reaches all students in the classroom; this is beneficial for everyone, particularly for those with minoritized identities. Instructors play a critical role in scaffolding how students are exposed to and learn science content in the classroom. In this manuscript, we discuss how biology instructors can make their classrooms more inclusive with regard to sex and gender diversity content. Many topics in biology are based on androcentric, heteronormative, and oppressive framing, even though those lenses are more reflective of our own history and culture than they are of the diversity we see in …

Carbaryl-Induced Leaf Necrosis In Vitis Rupestris B-38, Courtney Nicole Duncan

Graduate Theses/Dissertations

Agricultural insecticides are formulated to target insects while minimizing harm to the intended crop. In rare instances, however, insecticides induce harmful physiological reactions in certain plant genomes, inflicting severe tissue damage. This project investigated the genetic basis of such a reaction observed in the grape genotype Vitis rupestris B38 following exposure to the insecticide carbaryl, which manifests as interveinal leaf necrosis. Through analysis of an F1 hybrid progeny of this grapevine, I mapped this phenotype to a QTL on chromosome 16. The carbaryl-sensitive trait was repeatedly mapped to the same locus using phenotype data from two different field locations and …

Characterization Of The Interaction Of Three Domains Of Nlrp2 (Pyd, Lrr, And Nacht) With Ebp1 Protein, Rakshya Bhatta

Graduate Theses/Dissertations

NOD-like receptors (NLRs) are cytoplasmic proteins essential for various immune responses such as reactions to infectious diseases, metabolic and cellular damage, fetal development, and cancer. Among the 22 identified NLR proteins, research has highlighted the significant roles of NLRP2 in fetal development. NLRP2 is also classified as a maternal effect gene and the mutation to this gene can lead to DNA methylation imprinting defects, altered gene expression, and conditions such as recurrent miscarriages (RMs). The protein EBP1, which has been found to have roles in embryonic development has been implicated in the regulation of DNA methylation. Recent studies have also …

Disturbance-Prone Ozark Streams: Interactions Between Plants And The Stream Environment, Alexis Renea Reifsteck

Graduate Theses/Dissertations

Ozark streams are extremely diverse ecosystems, despite frequent flood disturbance. Plant communities are frequently altered by bed-moving floods but are extremely resilient. We know that land-use, sediments, and nutrients can impact plant communities, but more can be divulged about how plants alter communities and how environmental variables influence plant community composition in disturbance-prone Ozark streams. To address this, I examined two key aspects of Ozark stream ecosystems: the role of American Water Willow, Justicia americana, in structuring aquatic habitats and the factors influencing gravel bar plant community composition. In the first chapter, I investigated how J. americana, a …

Effects Of Subchronic Oral Pfos Exposure Via Drinking Water On Gut Microbiota Composition, Emma Ann Loder

Graduate Theses/Dissertations

Perfluorooctanesulfonic acid (PFOS) has been phased out of production in the United States, but because of its resistance to degradation and its persistence in the environment, PFOS can be found in drinking water across America. Oral exposure to PFOS has been linked to adverse developmental, immunological, hepatic, and endocrine health. Oral PFOS exposure may alter the gut microbiota and cause dysbiosis, which is implicated in the pathology of inflammatory diseases like Crohn’s disease, diabetes, and ulcerative colitis. The goal of the study was to investigate the effects of subchronic oral PFOS exposure on the composition of the gut microbiota. Adult …

Demographics And Recruitment Patterns In A Reintroduced Population Of Alligator Snapping Turtles (Macrochelys Temminckii), Melisa P. Blasky

Graduate Theses/Dissertations

Reintroductions have increasingly become a useful tool for managing wildlife populations, but post-reintroduction studies to evaluate the success of these efforts are often lacking. In 2007, 265 Alligator Snapping Turtles (Macrochelys temminckii) were released into several semi-impounded wetlands in the Washita River drainage basin in southeastern Oklahoma, where surveys in the late 1990s suggested that the species was functionally extirpated. I conducted turtle trapping surveys using baited hoop nets to assess demographics and recruitment patterns in the population 11–12 years after the initial reintroduction. I estimated the age of juveniles by counting scute annuli and compared the data …

How Environmental Variation Affects Bumblebee Cognition And The Gut Microbiome, Parker Madison Campbell

Graduate Theses/Dissertations

This master's thesis examines the influence of environmental variables on cognitive processes in Bombus impatiens, focusing on the effects of ingested microbial communities on gut microbiota and their subsequent impact on associative color learning. The study implemented controlled feeding trials with isolated microbe species (Candida bombi, Metschnikowia reukaufii, Lactobacillus micheneri and a control with no microbes) to analyze shifts in gut microbial composition in foraging bees. Results indicated minor alterations in the microbial profiles of bees, yet no statistically significant correlation was found between these modifications and variations in learning or memory performance. Furthermore, the study assessed the impact of …

Nsp3 Protein-Portion Interaction Of Sars-Cov-2 Using Two Yeast-Hybrid System, Ghadeer Jassem Zakareya

Selected Full-Text Master Theses 2021-

The NSP3 protein of SARS-CoV-2 plays a crucial role in the virus-host interaction during infection. This thesis explores the protein-protein interactions between NSP3 and host factors, shedding light on their significance in viral replication and pathogenesis. NSP3 is known to interact with various host proteins involved in key cellular processes, including innate immune response modulation, RNA processing and protein degradation pathways. Understanding these interactions is essential for developing targeted therapeutic strategies against COVID-19. Application of The Matchmaker GAL4Two-Hybrid Systems, to isolate the NSP3 protein and study the interactions, elucidating the NSP3 host protein interactions and attempting to identify potential key …

Deepwhalenet: A Climate Change-Aware Fft-Based Neural Network For Underwater Passive Acoustic Monitoring, Nicholas Ryan Rasmussen

Dissertations and Theses

In the face of escalating climate threats, the conservation of whale species has become increasingly critical. Traditional acoustic monitoring methods, burdened by extensive pre-processing and post-processing, need more adaptability and efficiency for effective marine mammal surveillance. This study introduces DeepWhaleNet, a novel deep-learning framework tailored for Underwater Passive Acoustic Monitoring (UPAM). DeepWhaleNet is designed to streamline whale detection by directly analyzing raw log-power spectrograms, thus extracting essential acoustic features to conserve these endangered species. The framework employs an extensive short-time Fourier transform (STFT) for input processing and a customized ResNet-18 architecture for classification, distinguishing whale vocalizations from ambient noise and …

Exploring The Role Of Nonmuscle Myosin Ii In Renal Thick Ascending Limb Epithelial Cell Protein Trafficking And Organelle Architecture, Brook Busselman

Dissertations and Theses

The traditional functional roles of the actin associated motor protein nonmuscle myosin II (NM2) have been thoroughly studied. However, the nontraditional roles for NM2 in the context of membrane remodeling and protein trafficking events in cells have just recently been unraveled. Our work has found that genetic inactivation of NM2 protein isoforms MYH9 and MYH10 in the renal epithelium of adult mice leads to progressive kidney disease. Aberrant protein transport and localization in cells of the thick ascending limb (TAL) of the kidney nephron is accompanied by upregulation of endoplasmic reticulum (ER) stress and the unfolded protein response (UPR) pathway. …

Osteohistological Assessment Of Edmontosaurus Radii From The Liscomb Bonebed, Prince Creek Formation, North Slope, Alaska, Emma Griffin

Student Research Poster Presentations 2024

Hadrosaurs were one of the most diverse dinosaur groups in the Late Cretaceous period and are known for their numerous articulated skeletons and monodominant bonebeds (Wosik et al., 2020). They are more commonly known as duck-billed dinosaurs and are found globally including latitudinal extremes such as the artic and Antarctica. Edmontosaurus, a genus of hadrosaur, are herbivores and are very large growing up to 8,000 pounds. Edmontosaurus were known to travel in herds as a defense mechanism and were one of the last non-avian dinosaurs living during the late Campanian stage through the end of the Maastrichtian stage, right up …

Do The Sexually Dimorphic Biofluorescent Glands Of Plethodon Cinereus Function In Mate Choice And Are They Seasonally Regulated By Photoperiod?, Sam C. Moody-Wynn

Masters Theses

The novel biofluorescent glands of the Eastern Red-backed Salamander (Plethodon cinereus), have been shown to be sexually dimorphic where males have larger and greater numbers of glands than females. Interestingly, a seasonal pattern of increased numbers of fluorescent glands, which mirrors the peak in testosterone levels, has been described. Currently, the function and regulation of the fluorescent glands is unknown. I predicted that the glands function as a form of male ornamentation used in intersexual communication, and perhaps act as an honest signal of male quality. Even though the fluorescent glands are located on the underside of the tail, there …