Biology Commons^™

Bat Species Acoustic Detections And Mist Net Captures 2017, 2018, 2019, 2022, 2023, 2025., Laroy Brandt

Faculty Peer-Reviewed Publications

No abstract provided.

Data For Forthcoming Article: "Employing Zebrafish To Understand Genetic Drivers Of Epilepsy-Related Comorbid Behaviors", Colleen Carpenter-Swanson

Biology Faculty Data

Forthcoming from Frontiers in Pharmacology:

"Children with epilepsy frequently experience a range of significant comorbidities beyond seizures, such as motor dysfunction, cognitive impairment, and neurodevelopmental delays. In some cases, these comorbidities contribute more significantly to overall disease burden than the seizures themselves. To improve quality-of-life (QOL) for these children, treatment options should be selected that control seizures and ameliorate comorbidities. Unfortunately, such therapeutics remain largely elusive. Addressing this issue requires suitable preclinical models. Here we used CRISPR-generated zebrafish with single-gene mutations linked to pediatric epilepsy and applied clinically-relevant behavioral assays to study the effects of these mutations. Using high-throughput locomotion-based …

Data For Forthcoming Article: "Employing Zebrafish To Understand Genetic Drivers Of Epilepsy-Related Comorbid Behaviors", Colleen Carpenter-Swanson

Biology Faculty Publications

Forthcoming from Frontiers in Pharmacology:

"Children with epilepsy frequently experience a range of significant comorbidities beyond seizures, such as motor dysfunction, cognitive impairment, and neurodevelopmental delays. In some cases, these comorbidities contribute more significantly to overall disease burden than the seizures themselves. To improve quality-of-life (QOL) for these children, treatment options should be selected that control seizures and ameliorate comorbidities. Unfortunately, such therapeutics remain largely elusive. Addressing this issue requires suitable preclinical models. Here we used CRISPR-generated zebrafish with single-gene mutations linked to pediatric epilepsy and applied clinically-relevant behavioral assays to study the effects of these mutations. Using high-throughput locomotion-based …

Ludwigia Hydrology Study, Rebecca E. Drenovsky, Rebecca Reicholf, Caryn J. Futrell*, Brenda Grewell*, Blanca Gallego-Tévar

Ludwigia Hydrology Study

Premise: Hydrological regime influences wetland plant species distribution and performance.Global warming and extreme weather events are magnifying flooding patterns, and understanding how invasive taxa respond across life stages (establishment vs. established phase) is important for predicting and managing their colonization and spread. Our objective was to measure flood trait responses at contrasting life stages in closely related congeners (Ludwigia peploides, diploid; L. hexapetala, decaploid; Onagraceae) differing in their invasiveness in the field.

Methods: In the field, we assessed phenological responses to seasonal hydrological changes, and in mesocosms, we assessed flood stress responses of establishing shoot fragments under deep-flooded, …

Jmorph Summary Data Cownose And Eagle Ray, Frank E. Fish

Biology Data Repository

The data are for the examination of hydrodynamic lift of the cephalic lobes of the cownose ray and spotted eagle ray. Data are from flow tank test of model heads of the two species.

Sea Turtle Turning, Frank E. Fish

Biology Data Repository

Data are for the analysis of the kinematics of turning by juvenile sea turtles.

Data To Accompany "Altered Heat-Avoidance Behavior Following Damage To The Extended Architecture Of Mexican Jumping Bean Moth Larvae (Cydia Saltitans)", Anna Purtell, Lindsey Swierk

Biological Sciences Faculty Scholarship

In response to physical damage, organisms must balance physical recovery with adaptive responses to other environmental stressors. Understanding how damage and repair influence adaptive responses to high environmental temperatures is of particular interest in light of global climate change. We investigate the impact of damage and subsequent repair on heat-avoidance behaviors in Cydia saltitans larvae inhabiting host seeds (Sebastiana pavoniana) as protective structures (together colloquially known as “Mexican jumping beans”). These larvae perform temperature-dependent “jumping” or “rolling” behaviors to escape extreme heat, which are crucial for larval survival in their native arid and hot subtropical dry forests. Due …

Data To Accompany 'Diving Behavior In Semi-Aquatic Anolis Lizards Results In Heat Loss With Sex-Specific Cooling Tolerance', Alexandra M. Martin, Lindsey Swierk

Biological Sciences Faculty Scholarship

Males and females often differ in use of antipredator behaviors, particularly when antipredator behavior comes at the cost of missed mating opportunities or territory defense. When using thermally suboptimal refugia, ectotherms are especially vulnerable to these costs, as their performance is linked to body temperature. To flee from predators, semi-aquatic Anolis lizards dive underwater for long periods and rebreathe from a bubble of air. We hypothesized that using aquatic refugia would result in thermal loss, that dive duration would be influenced by sex, and that oxygen consumption when diving would help explain sex differences. We tested these hypotheses by measuring …

Data For "Linking Previous Experiences To Behavior And Health In The Honey Bee (Apis Mellifera)"", Rebecca R. Westwick, Clare C. Rittschof, Gavin P. Brackett, Cameron E. Brown, Bethany J. Ison, Zainulabbeudin Syed, Anna M. Foose

Entomology Research Data

An organism’s ability to respond to changing conditions can be vital to its success. Indeed, plasticity is a common feature of living organisms. Much of the research in this area, though, has focused on effects caused by environmental conditions. What has received relatively less attention is how social experiences and broader features of an organism’s social environment can lead to long-lasting changes in health and behavior. This knowledge gap exists despite the well-documented existence of health and behavioral effects after social interactions in certain taxa such as humans.

Social insects such as honey bees provide an excellent opportunity to better …

Differentially Expressed Genes (Degs) Identified Under High Night Temperature (Hnt) And Control Conditions In 15 Rice Qtls For Grain Quality Traits, Navdeep Gill, Andy Pereira

Biology Faculty Datasets

This dataset contains a list of 149 Differentially Expressed Genes (DEGs) that were identified in two rice genotypes (Cypress and LaGrue) under control and High Night Temperature (HNT) conditions. The 149 up/down regulated genes are housed in the 15 rice QTLs for grain quality traits such as grain length (GL), grain width (GW), and percent chalkiness (%chalk) under control and HNT stress conditions.

Fundulus Parasite Database, Derek Garvey, Christopher Blanar, David Kerstetter

Biology Faculty Datasets

Data gathered from field sampling and literature review of presence/absence and abundance data for all metazoan parasite taxa described in Fundulus spp. populations from sample locations along the Atlantic coasts of the USA and Canada.

REVISION 03-13-2023: This revision added two tabs to the database. The "Taxonomy Key" tab was added to show the classification scheme used to group the observed parasite taxa. The "EndoEcto Key" tab was added to show the classification of each parasite taxon as either endoparasitic or ectoparasitic. The original database file can be found in supplemental content below.

Myrmecochorous Plants And Their Ant Seed Dispersers Through Successional Stages In Temperate Cove Forests, Robert Warren, Mary Schultz, James Costa, Beverly Collins, Mark Bradford

Biology Faculty Datasets

Anthropogenic disturbance can decrease woodland diversity in the species-rich herbaceous layer of eastern deciduous forests, and ant-dispersed (myrmecochorous) plants may be particularly affected due to their limited ability to re-colonize secondary forests. Consequently, we predicted that myrmecochorous plants and their keystone seed-dispersing ants would increase with time since last disturbance, as reflected by young, middle or mature forest successional stage. Specifically, we hypothesized that myrmecochore abundance and richness would be relatively lowest in the youngest forests, moderate in middle-aged forests and highest in mature forests. We also hypothesized that experimentally introducing ant bait in a regular pattern, as might be …

Winner-Loser Effects Part 3, Omar T. Eldakar, Natalie Buckwold, Andrew C. Gallup

Biology Faculty Datasets

The dataset is part of an investigation of patterns of wins and losses of two-, three-, and four-game collegiate baseball series for analysis of winner and loser, and residency effects. The dataset is a compilation of publicly available data from Atlantic 10, Conference USA, and Sunbelt conferences for the years 2015-2019.

An Exploration In The Tools Of Options Pricing - Data, Ryan Hinson, Chris Schroeder

2021 Celebration of Student Scholarship - Oral Presentations

Stock options can be a useful tool in any investor’s portfolio. They allow the skilled investor to increase their leverage and possibility for a higher payout with less risk. However, they are only beneficial if the investor knows how to use them, and if they accurately reflect the price of the option. This presentation hopes to offer some insight into the binomial method of options pricing along with new adjustments to the model in hopes of reflecting a more accurate options price. This, along with the Monte Carlo simulation presented, will hopefully offer some insight into the mathematical investor’s toolbox.

Acetaminophen Potentiates Fear: Comparing Evaluations Of Ancestral And Modern Threats, Andrew C. Gallup, Brianda K. L. Gagnon, Gillian Perry, Omar T. Eldakar

Biology Faculty Datasets

No abstract provided.

Data To Accompany: "Keeping It Cool To Take The Heat: Tropical Lizards Have Greater Thermal Tolerance In Habitats With Lower Ambient Temperatures", Lindsey Swierk

Biological Sciences Faculty Scholarship

No abstract provided.

Breeding And Feeding Habitat Selection By An Island Endemic Bird May Increase Its Vulnerability To Climate Change, Paul Radley, Eddie Van Etten, David Blake, Robert Davis

Research Datasets

Characterising patterns of habitat use is an important first step for effective conservation planning. Species restricted to low-lying islands are at greatest risk from climate change-related sea level rise, and requirements for breeding and foraging habitat may determine their risk from tidal inundation. The endangered Micronesian Scrubfowl (Megapodius laperouse senex) is a model species for understanding these impacts. This species faces the cumulative challenges of tourist visitation, invasive species, and rising sea levels, yet little is understood about its habitat use in the Rock Islands Southern Lagoon Conservation Area (RISL) of Palau. We studied the habitat requirements of …

A Brain-Infecting Parasite Impacts Host Metabolism Both During Exposure And After Infection Is Established, Lauren E. Nadler, Erik Bengston, Erika J. Eliason, Cameron Hassibi, Siri H. Helland-Riise, Ida B. Johansen, Garfield T. Kwan, Martin Tresguerres, Andrew V. Turner, Kelly L. Weinersmith, Øyvind Øverli, Ryan F. Hechinger

Marine & Environmental Sciences Faculty Datasets

1. Metabolic costs associated with parasites should not be limited to established infections. Even during initial exposure to questing and attacking parasites, hosts can enact behavioural and physiological responses that could also incur metabolic costs. However, few studies have measured these costs directly. Hence, little is known about metabolic costs arising from parasite exposure.
2. Further, no one has yet measured whether and how previous infection history modulates metabolic responses to parasite exposure.
3. Here, using the California killifish (Fundulus parvipinnis) and its brain-infecting parasite (Euhaplorchis californiensis), we quantified how killifish metabolism, behaviour, and osmoregulatory phenotype changed upon acute …

The Effect Of Intensified Illuminance And Artificial Light At Night On Fitness And Susceptibility To Abiotic And Biotic Stressors, Grascen Shidemantle

Biological Sciences Student Scholarship

Changing light conditions due to human activities represents an important emerging environmental concern. Although changes to natural light conditions can be independently detrimental, in nature, organisms commonly face multiple stressors. To understand the consequences of altered light conditions, we exposed a model amphibian (wood frog; Lithobates sylvaticus) to a control and two anthropogenic light conditions: intensified daytime illuminance and artificial light at night - ALAN (intensified daytime illuminance + extended photoperiod). We measured (1) metrics of fitness (hatching success as well as survival to, size at, and time to metamorphosis) (2) susceptibility (time to death) to a commonly cooccurring anthropogenic …

Direct And Indirect Effects Of A Common Cyanobacterial Toxin On Amphibian-Echinostome Dynamics, Nicholas Buss, Matthew Wersebe, Jessica Hua

Biological Sciences Student Scholarship

Wildlife diseases are emerging at unprecedented rates. While there are likely several factors at play, human-mediated environmental alterations may play a significant role. Of growing interest is the effect that microcystin-LR (MC-LR), a cyanotoxin, may have on disease outcomes. In this study, using an amphibian-trematode model we examined (1) the lethal effects of MC-LR on cercariae of trematodes; (2) the sublethal effects of MC-LR exposure on the ability for trematodes to infect green frog tadpoles; and (3) the sublethal effects of MC-LR on green frog tadpole susceptibility to trematodes. We found that environmentally-relevant concentrations of MC-LR at 50, 100, and …

Parasite Susceptibility In An Amphibian Host Is Modified By Salinization And Predators, Nicholas Buss, Jessica Hua

Biological Sciences Student Scholarship

Secondary salinization represents a global threat to freshwater ecosystems. Salts, such as NaCl, can be toxic to freshwater organisms and may also modify the outcome of species interactions (e.g. host-parasite interactions). In nature, hosts and their parasites are embedded in complex communities where they face anthropogenic and biotic (i.e. predators) stressors that influence host-parasite interactions. As human populations grow, considering how anthropogenic and natural stressors interact to shape host-parasite interactions will become increasingly important. We conducted two experiments investigating: (1) the effects of NaCl on tadpole susceptibility to trematodes and (2) whether density- and trait-mediated effects of a parasite-predator (i.e. …

Using Ecological Analyses To Characterize Socio-Economic Food Deserts, Annie Goyanes, J. Matthew Hoch

Marine & Environmental Sciences Faculty Datasets

“Food desert” refers to an area where citizens lack access to fresh, affordable, nutritious food. Food deserts are generally in low-income urban neighborhoods or rural towns and can be considered environmental or economic injustice. South Florida and Broward County have been documented as having a high food insecurity rate, indicative of households having difficulty putting food on the table. Given the high rate of food insecurity, it was hypothesized that a lack of access to food and the presence of socio-economic food deserts was at least partially responsible. Data was collected by visiting three supermarkets in each of the 13 …

Size-Assortative Mating In Explosively Breeding Species: A Case Study Of Adaptive Male Mate Choice In An Anuran, Lindsey Swierk

Biological Sciences Faculty Scholarship

No abstract provided.

Impact Of Nacl Tolerance On The Stress Physiology And Fitness Of Larval Wood Frogs (Rana Sylvatica), Grascen Shidemantle, Nicholas Buss, Jessica Hua

Biological Sciences Student Scholarship

No abstract provided.

Carbon Limitation In Periphytic Algal Wastewater Treatment Systems, Brandon Furnish, Troy Keller

CSU Datasets

This data set includes the results of 3 independent lab experiments that examined the role of carbon limitation in algal wastewater treatment systems.

Pennuto Et Al. Goby Migration Data, Christopher Pennuto

Biology Faculty Datasets

These are data used for a manuscript on round goby nearshore/offshore migration behavior in Lake Ontario. The file is an Excel format that includes raw data for number of fish observed, their sizes, size of gobies in sturgeon guts.

Human Anatomy And Physiology I: Course Map With Expected Learning Outcomes, Carlos Liachovitzky

Open Educational Resources

This document contains a list with all the Anatomy and Physiology I expected learning outcomes organized by topics, and grouped into ten units: 1. Introduction to A&P: body plan & organization; 2. Introduction to A&P: homeostasis; 3. The chemical level of organization; 4. Levels of organization: the cellular level of organization; 5. Levels of organization: the tissue level of organization; 6. Support and movement: integumentary system; 7. Support and movement: skeletal system & articulations; 8. Support and movement: muscular system; 9. Regulation, integration, and control: nervous system; 10. Regulation, integration, and control: special senses

Each learning outcome is referred to …

Regeneration Data: Rna Sequences, Abijeet Singh Mehta, Amit Singh

Regeneration data

Abstract for paper for which this research was collected: Notophthalmus viridescens (Red-spotted Newt) possess amazing capabilities to regenerate their organs and other tissues. Previously, using a de novo assembly of the newt transcriptome combined with proteomic validation, we identified a novel family of 5 protein members expressed in adult tissues during regeneration in Notophthalmus viridescens. Due to absence of transgenic approaches in the Notophthalmus, and conservation of genetic machinery across species, we generated transgenic Drosophila melanogaster to misexpress these genes.

Samples for RNA sequencing were collected at third instar larval (L3) developmental stage. Out of the total 36,099 …

Living Shoreline Stabilization To Increase Resiliency At De Soto National Memorial, Linda Walters, Melinda Donnelly, Christian Pilato, Suzanne Connor

CEELAB Research Data

De Soto National Memorial (Bradenton, FL) is an important location where both Native Americans and De Soto's army of soldiers once lived. We have been working closely with the National Park Service and the University of Central Florida to understand how to best stabilize this shoreline using living shoreline techniques combined with long-term natural recruitment. Stabilizing De Soto's shoreline is essential to decrease erosion and shoreline loss to protect the Park's cultural and natural resources, especially the numerous historically significant shell middens. Through pre-restoration monitoring, we determined that high-energy boat wakes were limiting natural mangrove recruitment. Lack of retention of …

Dna Sequences Of Mitochondrial Cytochrome C Oxidase I (Coi) Genes From Deep Sea Fishes Collected During Deepend Cruise Dp05 From 2017-05-01 To 2017-05-11, Kimberly A. Finnegan, Andrea Bernard, M. Weber, Ron Eytan, Mahmood S. Shivji

DEEPEND Datasets

Deep sea fishes were collected in the northern Gulf of Mexico during DEEPEND cruise DP05 from May 1 to 11, 2017. This dataset contains Genbank accession numbers of DNA sequences of the mitochondrial Cytochrome c oxidase I (COI) gene from fish species collected.