Biology Commons^™

Background Acoustics In Terrestrial Ecology, Clinton D. Francis, Jennifer N. Phillips, Jesse R. Barber

Biology Faculty Publications and Presentations

The way in which terrestrial organisms use the acoustic realm is fundamentally important and shapes behavior, populations, and communities, but how background acoustics, or noise, influence the patterns and processes in ecology is still relatively understudied. In this review, we summarize how background acoustics have traditionally been studied from the signaling perspective, discuss what is known from a receiver's perspective, and explore what is known about population- and community-level responses to noise. We suggest that there are major gaps linking animal physiology and behavior in noise to fitness; that there is a limited understanding of variation in hearing within and …

Functional Analysis Of The Gamma-Aminobutyric Acid Type A Receptor Subunit Alpha-1 (Gabra1) Gene During Zebrafish Development., Nayeli Gabriela Reyes-Nava

Open Access Theses & Dissertations

The GABRA1 gene encodes for the alpha-1 (α1) subunit of the Gamma-Aminobutyric acid type A receptor (GABAAR), which are the primary modulators of synaptic inhibition in the central nervous system (CNS). Alpha-1 subunits are essential for maintaining the normal function of native receptors and contribute to over 60% of all GABAARs in the CNS. Remarkably, a broad spectrum of neurodevelopmental and epilepsy-associated disorders have been linked with mutations in the GABRA1 gene. However, the developmental, behavioral, and molecular mechanisms underlying GABRA1-associated epileptic disorders remain to be fully understood. Hence, the overarching goal of this dissertation is to investigate the behavioral …

Effects Of Maternal Disease History On Provisioning, Brooding, And Offspring Outcomes, Sakura Roberts

Biological Sciences Undergraduate Honors Theses

Disease within a population has the ability to shape the development, evolution, and general performance of a species. Pathogen exposure to hosts can influence their physiology and behavioral patterns to further shape offspring immunity. Parental conditions experienced by offspring during early development can benefit survival and fitness (e.g. increasing provisioning rates), as well as help deter against similar diseases experienced by parents. By testing if parental behavior changes can better prepare offspring outcomes for disease exposure, such as disease severity or duration of infection, we can see the beneficial impacts it has on disease dynamics and host-pathogen processes. Incubation temperature, …

I Ain't Afraid Of No Crab: Intertidal Gastropod Littorina Littorea Behavioral Response To Predation Risk By Carcinus Maenas, Isabelle Erin Smy

Honors College

Littorina littorea is an intertidal, invasive gastropod species common in the Gulf of Maine. In this paper, I studied the avoidance and risk-reducing behavioral responses of L. littorea to predation risk by invasive crustacean species Carcinus maenas. Avoidance and risk-reducing behavior in this study are defined by the tendency to move towards the edge and out of a simulated tide pool and the tendency to reduce feeding. The goal of this study was to determine whether the exposure to chemical cues of predators resulted in an increase in avoidance behavior, risk-reducing behavior, and a reduction in the time before the …

The Impacts Of Immune Challenges On Fish Behavior And Physiology, Teisha King

LSU Doctoral Dissertations

For species living in dominance hierarchies, social rank dictates access to resources and often contributes to reproductive success. To ensure survival, individuals constantly evaluate trade- offs between crucial biological systems, like the reproductive and immune systems, depending on their social rank and physiological state. Little is known about how social species balance interactions between immune system function, fluctuations in social status and reproductive fitness, and the performance of behaviors necessary for maintaining social status when sick, particularly in fishes, the largest and most diverse group of vertebrates. My dissertation research uses a whole animal approach to examine how physiological profiles …

Bobcat Identification, Abundance, And Behavior At Road Mitigation Structures In South Texas, Victoria Hanley

Theses and Dissertations

Highways in South Texas fragment the landscape and result in high road mortality rates for the endangered US ocelot (Leopardus pardalis). In response, the Texas Department of Transportation constructed nine wildlife crossing structures (WCS) on Farm-to-Market (FM) 106 which adjoins Laguna Atascosa National Wildlife Refuge in Cameron County, Texas. With ocelots being rare and elusive, bobcats (Lynx rufus) are often used as a surrogate species to study felid behavior at road mitigation structures in South Texas. Bobcats have unique markings which allow them to be individually identified. Three methods of individual identification of bobcats using camera …

Importance Of The Microhabitat And Microclimate Conditions In The Northern Gray-Cheeked Salamander (Plethodon Montanus) Across An Elevation Gradient, Trevor Chapman

Electronic Theses and Dissertations

The southern Appalachian Mountains have among the highest salamander diversity in the world, largely due to local speciation in the family Plethodontidae. Plethodontid salamanders (i.e., lungless salamanders) are particularly sensitive to habitat climate conditions due to their reliance on cutaneous respiration, and their immediate environmental conditions (microhabitat) likely influence their dispersion and activity more than the large-scale atmospheric conditions. The Northern Gray-cheeked salamander (Plethodon montanus) is restricted to high elevations in the Appalachian Mountains. Our goal was to investigate the relationship between P. montanus and its microhabitat by examining behavioral preference for climatic conditions, characterizing the microclimate with …

Planarian Fragments Behave As Whole Animals, D. Le, Ziad Sabry , '21, A. Chandra, W. B. Kristan Iii, Eva-Maria S. Collins, W. B. Kristan Jr.

Biology Faculty Works

Behavioral responses of freshwater planarians have been studied for over a century. In recent decades, behavior has been used as a readout to study planarian development and regeneration, wound healing, molecular evolution, neurotoxicology, and learning and memory. The planarian nervous system is among the simplest of the bilaterally symmetric animals, with an anterior brain attached to two ventral nerve cords interconnected by multiple commissures. We found that, in response to mechanical and near-UV stimulation, head stimulation produces turning, tail stimulation produces contraction, and trunk stimulation produces midbody elongation in the planarian Dugesia japonica. When cut into two or three pieces, …

Differences In Neurotoxic Outcomes Of Organophosphorus Pesticides Revealed Via Multi-Dimensional Screening In Adult And Regenerating Planarians, Danielle Ireland, S. Zhang, Veronica Bochenek , ' 22, J.-H. Hsieh, Christina Rabeler, Zane Meyer , '21, Eva-Maria S. Collins

Biology Faculty Works

Organophosphorus pesticides (OPs) are a chemically diverse class of commonly used insecticides. Epidemiological studies suggest that low dose chronic prenatal and infant exposures can lead to life-long neurological damage and behavioral disorders. While inhibition of acetylcholinesterase (AChE) is the shared mechanism of acute OP neurotoxicity, OP-induced developmental neurotoxicity (DNT) can occur independently and/or in the absence of significant AChE inhibition, implying that OPs affect alternative targets. Moreover, different OPs can cause different adverse outcomes, suggesting that different OPs act through different mechanisms. These findings emphasize the importance of comparative studies of OP toxicity. Freshwater planarians are an invertebrate system that …

Head Removal Enhances Planarian Electrotaxis, Ziad Sabry , '21, Rui Wang, A. Jahromi, Christina Rabeler, W. B. Kristan Iii, Eva-Maria S. Collins

Biology Faculty Works

Certain animal species utilize electric fields for communication, hunting and spatial orientation. Freshwater planarians move toward the cathode in a static electric field (cathodic electrotaxis). This planarian behavior was first described by Raymond Pearl more than a century ago. However, planarian electrotaxis has received little attention since, and the underlying mechanisms and evolutionary significance remain unknown. To close this knowledge gap, we developed an apparatus and scoring metrics for automated quantitative and mechanistic studies of planarian behavior upon exposure to a static electric field. Using this automated setup, we characterized electrotaxis in the planarian Dugesia japonica and found that this …

Brainless But Smart: Investigating Cognitive-Like Behaviors In The Acellular Slime Mold Physarum Polycephalum, Subash Kusum Ray

Dissertations

Evolutionary pressures to improve fitness, have enabled living systems to make adaptive decisions when faced with heterogeneous and changing environmental and physiological conditions. This dissertation investigated the mechanisms of how environmental and physiological factors affect the behaviors of non-neuronal organisms. The acellular slime mold Physarum polycephalum was used as the model organism, which is a macroscopic, unicellular organism, that self-organizes into a network of intersecting tubules. Without using neurons, P. polycephalum can solve labyrinth mazes, build efficient tubule networks, and make adaptive decisions when faced with complicated trade-offs, such as between food quality and risk, speed and accuracy, and exploration …

Abundance, Site-Fidelity, And Association Patterns Of Coastal Bottlenose Dolphins (Tursiops Truncatus) Off Southeast Florida, Graysen D. Boehning

All HCAS Student Capstones, Theses, and Dissertations

The coastal bottlenose dolphin is well studied throughout its natural range, however, most of the study areas comprised wide, well-protected habitats such as bays and estuaries, and not narrow coastal sandbanks. This study identifies a residential group of coastal bottlenose dolphins utilizing the narrow sandbanks within the Northwestern Atlantic waters off the coast of Palm Beach County, Florida, USA. From 2014-2020, 313 boat surveys were conducted, and 585 individual dolphins were identified using photo-ID. Twenty-four animals were determined to be full-time and 66 animals were determined to be part-time residents. Full-time and part-time residents associated in three social tribes, with …

Nature, Data, And Power: How Hegemonies Shaped This Special Section, A. Kamath, B. Velocci, A. Wesner, N. Chen, Vincent A. Formica, B. Subramaniam, M. Rebolleda-Gómez

Biology Faculty Works

Systems of oppression—racism, colonialism, misogyny, cissexism, ableism, heteronormativity, and more—have long shaped the content and practice of science. But opportunities to reckon with these influences are rarely found within academic science, even though such critiques are well developed in the social sciences and humanities. In this special section, we attempt to bring cross-disciplinary conversations among ecology, evolution, behavior, and genetics on the one hand and critical perspectives from the social sciences and humanities on the other into the pages—and in front of the readers—of a scientific journal. In this introduction to the special section, we recount and reflect on the …

Sodium Mediates Developmentally Plastic Responses In Plants And Herbivores, Luis Santiago-Rosario

LSU Doctoral Dissertations

Sodium plays a crucial role in organismal performance, trophic-level interactions, and eco-evolutionary dynamics. For plants, sodium impacts osmoregulation, growth, and water uptake. For animals, sodium is essential influencing osmoregulatory processes, muscle and neural development, and blood regulation. My dissertation aims to disentangle why sodium mismatch affects resource-consumer interactions and its influence on morphological and behavioral plasticity. First, I identified how sodium impacts plant performance and sodium accumulation strategies. I initially focused my research on understanding how increasing substrate sodium affects plant growth and tissue sodium accumulation strategies in controlled settings using a systematic review approach. I found that saltier plants …

The Consequences Of Climate Change For Native Bee Assemblages, Melanie R. Kazenel

Biology ETDs

Recent declines in terrestrial arthropod biodiversity highlight the need to pinpoint which taxa and ecosystem services are most threatened, and why. But, for most of the world’s ~20,000 bee species, we lack robust evidence of population trends, and the role of climate change remains surprisingly little studied. I used long-term bee monitoring data from the Sevilleta Long-Term Ecological Research Program (Socorro, NM, USA), along with complementary experimental and observational data, to examine how climate relates to bee abundance and diversity patterns over time and space, and to identify the traits that govern bees’ climate sensitivities.

Mammals Adjust Diel Activity Across Gradients Of Urbanization, Travis Gallo, Mason Fidino, Brian Gerber, Adam A. Ahlers, Julia L. Angstmann, Max Amaya, Amy L. Concilio, David Drake, Danielle Gray, Elizabeth W. Lehrer, Maureen H. Murray, Travis J. Ryan, Colleen Cassady St. Clair, Carmen M. Salsbury, Heather A. Sanders, Theodore Stankowich, Jacque Williamson, J. Amy Belaire, Kelly Simon, Seth B. Mangle

Scholarship and Professional Work - LAS

Time is a fundamental component of ecological processes. How animal behavior changes over time has been explored through well-known ecological theories like niche partitioning and predator–prey dynamics. Yet, changes in animal behavior within the shorter 24-hr light–dark cycle have largely gone unstudied. Understanding if an animal can adjust their temporal activity to mitigate or adapt to environmental change has become a recent topic of discussion and is important for effective wildlife management and conservation. While spatial habitat is a fundamental consideration in wildlife management and conservation, temporal habitat is often ignored. We formulated a temporal resource selection model to quantify …

High-Frequency Accelerometer Recording Of Key Predatory Behaviors In Vipers: Validation And Case Study With Timber Rattlesnakes (Crotalus Horridus), Morgan L. Thompson, Richard H. Adams, Anna Tipton, Dominic L. Desantis

Graduate Research Showcase

High-frequency accelerometer recording of key predatory behaviors in vipers: validation and case study with Timber Rattlesnakes (Crotalus horridus)

Morgan Thompson, Richard H. Adams, Anna F. Tipton, and Dominic L. DeSantis

Tri-axial accelerometers (ACTs) are becoming increasingly common in studies of animal behavior wherein direct observation of subjects in nature is constrained or impossible. ACTs are small (< 1 g) piezo-electric (spring-like) sensors that measure three-dimensional acceleration (upward, downward, and side-to-side) derived from subject motion. When leveraged with advanced machine learning techniques, these data can enable precise automated classification of a wide range of movement-mediated behaviors. Until recently, ACTs were largely reserved for larger-bodied organisms or those most amenable to the temporary external attachment of devices. Ongoing ACT miniaturization has now expanded the breadth of organisms amenable to these methods. This project aims to expand on a recently developed framework for ACT monitoring in wild-ranging snakes, a group that has been mostly overlooked in biologging applications. We are currently conducting extensive captive validation trials for robust model training and testing to enable classification of predatory behaviors, including striking and ingestion of prey items, in Timber Rattlesnakes (Crotalus horridus). Following captive validation, we will translate this method to the field with a population of C. horridus in the lower Piedmont of middle Georgia to evaluate the efficacy of externally attached ACTs for remote and continuous monitoring of …

Glia Excitation In The Cns Modulates Intact Behaviors And Sensory-Cns-Motor Circuitry, Shelby Mccubbin, Douglas A. Harrison, Robin L. Cooper

Biology Faculty Publications

Glial cells play a role in many important processes, though the mechanisms through which they affect neighboring cells are not fully known. Insights may be gained by selectively activating glial cell populations in intact organisms utilizing the activatable channel proteins channel rhodopsin (ChR2XXL) and TRPA1. Here, the impacts of the glial-specific expression of these channels were examined in both larval and adult Drosophila. The Glia > ChR2XXL adults and larvae became immobile when exposed to blue light and TRPA1-expressed Drosophila upon heat exposure. The chloride pump expression in glia > eNpHR animals showed no observable differences in adults or larvae. In …

Activity Patterns Of The Del Norte Salamander (Plethodon Elongatus): Monitoring Plethodontid Behavior Using Pit Tag Surveys, Sabrina Horrack

Cal Poly Humboldt theses and projects

Semi-fossorial plethodontid salamanders exhibit behavioral plasticity to avoid desiccation, retreating underground to shelter from adverse conditions such as low precipitation and high temperatures. In this study, I used passive integrated transponder (PIT) tag surveys to monitor this behavior in the Del Norte salamander (Plethodon elongatus), a small plethodontid native to northwestern California and southwestern Oregon. Within its range, a climatic gradient exists in which coastal areas experience milder temperatures and high precipitation, while inland areas tend to have colder winters, hotter summers, and lower precipitation. By monitoring the activity patterns of this species in inland and coastal areas, …

Effects Of Exogenous Ketone Therapy On Performance, Cardiorespiration, And Seizure Genesis During Exposure To Hbo2 In The Sprague Dawley Rat, Nicole M. Stavitzski

USF Tampa Graduate Theses and Dissertations

Hyperbaric oxygen (HBO2) is used for clinical HBO2 therapy and in undersea and aerospace medicine. HBO2 is a humanmade extreme environment and protracted exposures can cause several adverse physiological effects on the body. For example, HBO2 increases the partial pressure of oxygen (PO2) in the body leading to redox stress. Redox stress is, in part, a cause of oxygen toxicity that manifests as seizures in its most severe form (central nervous system oxygen toxicity, CNS-OT). This dissertation focuses on strategies to be employed specifically for the warfighter breathing HBO2. Currently, the only way to prevent CNS-OT is to lower the …

The Effect Of Optogenetically Activating Glia On Neuronal Function, Cecilia Pankau, Shelby Mccubbin, Robin L. Cooper

Biology Faculty Publications

Glia, or glial cells, are considered a vital component of the nervous system, serving as an electrical insulator and a protective barrier from the interstitial (extracellular) media. Certain glial cells (i.e., astrocytes, microglia, and oligodendrocytes) within the CNS have been shown to directly affect neural functions, but these properties are challenging to study due to the difficulty involved with selectively-activating specific glia. To overcome this hurdle, we selectively expressed light-sensitive ion channels (i.e., channel rhodopsin, ChR2-XXL) in glia of larvae and adult Drosophila melanogaster. Upon activation of ChR2, both adults and larvae showed a rapid contracture of body wall …

The Behaviors Of A Captive Father-Daughter Pair Of Ateles Geoffroyi Geoffroyi, Felicia Gordian

The Pegasus Review: UCF Undergraduate Research Journal

The Central Florida Zoo and Botanical Gardens intends to introduce new members to the black-handed spider monkeys (Ateles geoffroyi geoffroyi) enclosure. The behavioral analysis of captive animals within their human-made zoo environments is pertinent information for zookeepers before such an introduction can be made. To contribute to that goal, this study observed the behaviors of a father-daughter pair of black-handed spider monkeys. This study observed their vocalizations, habitat utilization, enrichment utilization, conspecific interactions, and interactions with humans to better understand how they interact with their environment as well as their group dynamics. This behavioral baseline can then be utilized to …

Ecological Correlates Of Alligator Snapping Turtle Bite Performance, Ashley Herrin Gagnon

MSU Graduate Theses

The Alligator Snapping Turtle (Macrochelys temminckii) is one of many turtle species facing conservation challenges. Nearly extirpated in the 1980s, it is currently the subject of a head-start initiative, of which, any lasting behavioral or physiological effects were—until now—unknown! To evaluate the ability of captive-reared individuals to excel in natural habitats, and to foresee any future research or conservation challenges regarding this animal, I explored a suite of variables that influence bite performance and behaviors including captive or free-ranging status, and environmental conditions including body temperature and season. My results indicated that free-ranging M. temminckii outperform those residing …

Effects Of Anthropogenic Light And Noise On Anuran Breeding Behavior, Ashley Kobisk

Electronic Theses and Dissertations

The natural environment can be negatively impacted by a variety of human activities, including the production of artificial light at night and anthropogenic noise. Recent studies suggest that pollution from anthropogenic light and noise alters animal behavior. Despite being highly nocturnal and vocal animals, little attention has been given to anurans and the effects artificial light at night and anthropogenic noise have on their behavior. This study investigated the effects of artificial light at night and anthropogenic noise on anuran breeding systems in eastern Texas. Specifically, this study investigated whether (1) artificial light and anthropogenic noise altered calling behavior in …

On The Rocks: Changes In Substrate Alter Antipredator Behavior In Benthic Stream Fish, Sarah White

MSU Graduate Theses

Natural selection should strongly favor characteristics that make prey difficult for predators to distinguish from the background, including both morphological and behavioral crypsis. The Rainbow Darter (Etheostoma caeruleum) is a small, cryptic, benthic fish that inhabits gravel-bottomed streams and is preyed upon by predators such as the benthic Knobfin Sculpin (Cottus immaculatus) and the pelagic Longear Sunfish (Lepomis megalotis). In three experiments, I tested whether the behavior of darters was influenced by the opportunity for crypticity offered by their substrate and by the presence of cues from benthic and pelagic predators. First, darters in …

Effect Of Temperature On Questing Activity Of Ixodes Scapularis In A Laboratory Setting, Molly Meagher

Thinking Matters Symposium

Understanding deer tick (Ixodes scapularis) behavior is increasingly important due to the species’ northerly range expansion, and consequently, increased human contact. Deer ticks are a major public health concern, as they are the primary vector of Lyme disease and other serious diseases. Differences in questing behavior are of considerable interest as fluctuating weather due to climate change effect the species’ range expansion and time spent questing. Although previous research has examined temperature preferences of tick behavior, there are conflicting reports about direct effects on questing activity. Therefore, I addressed the relationship between temperature and questing behavior of adult deer ticks. …

Functional Regionalization In The Fly Eye As An Adaptation To Habitat Structure, Carlos A. Ruiz

FIU Electronic Theses and Dissertations

With over 150,000 described species, flies constitute one of the most species-rich groups of animals on earth, and have managed to colonize almost every corner of it. Part of their success comes from their amazing flying skills, which are strongly tied to their visual capabilities. To navigate fast and accurately through their habitats, they must be able to process the inordinate amounts of visual information necessary to sort obstacles, avoid predators and remain on course. Surprisingly, despite their tiny brains, flies have no problem in processing all that information to generate correcting maneuvers in just about 30 ms. To this …

Behavioral Analysis Of The Cryptoprocta Ferox In An Ex-Situ Condition, Emilie Alfonso

The Pegasus Review: UCF Undergraduate Research Journal

Fossas (Cryptoprocta ferox) are the top, endemic predators of Madagascar. Their populations are dwindling and are reported as “Vulnerable” by IUCN. In an effort to combat this, zoological facilities have placed the species on a captive breeding program. This study focuses on concerns one of those zoos had about their captive C. ferox. The purpose of this study was to collect activity budgets on the C. ferox to determine if there is a change in behavior due to construction occurring around the C. ferox’s habitat, analyze behavior changes during estrus, determine any behavior changes, as well …

Black Vulture Conflict And Management In The United States: Damage Trends, Management Overview, And Research Needs, Bryan M. Kluever, Morgan B. Pfeiffer, Scott C. Barras, Brett G. Dunlap, Lee A. Humberg

Human–Wildlife Interactions

Contrary to rapid declines of many vulture (Accipitridae, Cathartidea) species worldwide, black vulture (Coragyps atratus) populations are increasing and expanding their range in North America. Vultures exhibit complex behaviors and can adapt to any human-dominated landscape or land use. These traits, combined with population growth and range expansion, have contributed to increased human–vulture conflicts. Our goal was to summarize the current status and trends in human–black vulture conflicts (hereafter human–vulture conflicts), review available management strategies, identify knowledge gaps, and provide recommendations to enhance management and understanding of this species and the associated conflicts. We found human–vulture conflicts are …

Interactive Effects Of Heat Stress And Pesticides Co-Exposure On Swimming Behavior, Oxidative Stress, Antioxidant Expression, And Redox Status In Common Goldfish (Carassius Auratus), Brittney Danielle Lacy

Theses and Dissertations

Aquatic ecosystems are inundated by environmental pesticides. This study, observed the dose-dependent effects of pesticides cocktail (metalachlor, linuron, isoproturon, tebucanazole, aclonifen, atrazine, pendimethalin, and azinphos-methyl) and elevated temperature (32 °C for 4-week exposure) on morphology of gills and kidneys, and expression of nitrotyrosine protein (NTP), dinitrophenyl protein (DNP), catalase (CAT), superoxidase dismutase (SOD), Na+/K+-ATPase, renin, and apoptosis in tissues of goldfish. Additionally, the effects on the free-swimming behavior were also observed. Histological analysis showed wide-spread damage in tissues at higher temperature and pesticides co-exposure. Immunohistochemical analysis demonstrated alterations in NTP, DNP, CAT and SOD expressions in tissues at higher temperature …