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Multi-Parental Mating Design Analysis: Model Evaluation And Application In Spring Wheat, M. Kadariya, K. D. Glover, J. Wu, J. L. Gonzalez 2011 Kansas State University Libraries

Multi-Parental Mating Design Analysis: Model Evaluation And Application In Spring Wheat, M. Kadariya, K. D. Glover, J. Wu, J. L. Gonzalez

Conference on Applied Statistics in Agriculture

Conventional quantitative genetics studies have mainly focused on bi-parental mating systems. However, genetic potential of selected individuals within a segregating population may be limited due to only two parents being used for each cross. Multiple-parental mating systems have been proposed that involve three or four diverse parents. This provides a higher potential of combining desirable genes. Due to complexity of the data structure of multi-parental mating systems, analysis of variance (ANOVA) methods are not applicable in analysis. The objective of this study is to validate and apply a mixed linear model approach, minimum norm quadratic unbiased estimation (MINQUE), to analyze …


Estimating The Subject By Treatment Interaction In Non-Replicated Crossover Diet Studies, Matthew Kramer, Shirley C. Chen, Sarah K. Gebauer, David J. Baer 2011 Kansas State University Libraries

Estimating The Subject By Treatment Interaction In Non-Replicated Crossover Diet Studies, Matthew Kramer, Shirley C. Chen, Sarah K. Gebauer, David J. Baer

Conference on Applied Statistics in Agriculture

Researchers in human nutrition commonly refer to the ‘consistent’ diet effect (i.e. the main effect of diet) and an ‘inconsistent’ diet effect (i.e. a subject by diet interaction). However, due to the non-replicated designs of most studies, one can only estimate the first part using ANOVA; the latter (interaction) is confounded with the residual noise. In many diet studies, it appears that subjects do respond differently to the same diet, so the subject by diet interaction may be large. In a search of over 40,000 published human nutrition studies, most using a crossover design, we found that in none was …


Probability Models To Study The Spatial Pattern, Abundance And Diversity Of Tree Species, D. M. Gowda 2011 Kansas State University Libraries

Probability Models To Study The Spatial Pattern, Abundance And Diversity Of Tree Species, D. M. Gowda

Conference on Applied Statistics in Agriculture

Ecological communities are composed of complex vegetation that differs from community to community and also within the community. The variability of tree species in the community in relation to their environments can be studied by using different statistical tools. The present study was conducted to describe and also to quantify the spatial pattern, abundance and diversity of tree species in the Western Ghats of Karnataka. The spatial pattern of tree species was studied by using Poisson and Negative binomial distributions. Results indicate that most of the selected tree species followed Negative binomial distribution having clumped pattern. The Species abundance distribution …


Spatio-Temporal Covariance Modeling With Some Arma Temporal Margins, Samuel Seth Demel, Juan Du 2011 Kansas State University Libraries

Spatio-Temporal Covariance Modeling With Some Arma Temporal Margins, Samuel Seth Demel, Juan Du

Conference on Applied Statistics in Agriculture

A valid covariance structure is needed to model spatio-temporal data in various disciplines, such as environmental science, climatology and agriculture. In this work we propose a collection of spatio-temporal functions whose discrete temporal margins are some autoregressive and moving average (ARMA) models, obtain a necessary and sufficient condition for them to be covariance functions. An asymmetric version of this model is also provided to account for space-time irreversibility property in practice. Finally, a spatio-temporal model with AR(2) discrete margin is fitted to wind data from Ireland for estimation and prediction, which are compared with some general existing parametric models in …


Logistic Regression Analysis To Determine Factors Contributing To Summer Feedlot Deaths, J. Clausen, A. M. Parkhurst, T. L. Mader 2011 Kansas State University Libraries

Logistic Regression Analysis To Determine Factors Contributing To Summer Feedlot Deaths, J. Clausen, A. M. Parkhurst, T. L. Mader

Conference on Applied Statistics in Agriculture

Summer heat has already been identified as a major factor for cattle deaths in the feedlot. This study attempts to assess what other factors contribute to and/or influence cattle deaths. Identifying multiple factors that contribute to summer feedlot deaths could aid feedlot managers in implementation of mitigation strategies and minimize the loss of nearly finished cattle. Daily pen, cattle, and nutritional characteristics were recorded and included in this generalized linear mixed model analysis. Cattle data were obtained from cattle pens at a single location from July 1, 2010 to July 31, 2010. Hourly weather data were acquired from this feed …


Confidence Intervals For Variance Components Using Non-Normal Distributions, Brent D. Burch 2011 Kansas State University Libraries

Confidence Intervals For Variance Components Using Non-Normal Distributions, Brent D. Burch

Conference on Applied Statistics in Agriculture

Simulation studies are conducted to evaluate the performance of confidence intervals for variance components under non-normal distribution assumptions. Confidence intervals based on the pivotal quantity (PQ) method and the large-sample properties of the restricted maximum likelihood (REML) estimator are considered. Of particular interest is the actual coverage value of nominal 95% confidence intervals for a ratio of variance components. In the context of unbalanced one-way random effects models, simulation results and an empirical example involving arsenic concentrations in oyster tissue suggest that the REML-based confidence interval is preferred.


Ordinary Least Squares Regression Of Ordered Categorical Data: Inferential Implications For Practice, Beth Larrabee, H. Morgan Scott, Nora M. Bello 2011 Kansas State University Libraries

Ordinary Least Squares Regression Of Ordered Categorical Data: Inferential Implications For Practice, Beth Larrabee, H. Morgan Scott, Nora M. Bello

Conference on Applied Statistics in Agriculture

Ordered categorical responses (OCRs) are frequently encountered in many disciplines. Examples of interest in agriculture include quality assessments, such as for soil or food products, and evaluation of lesion severity, such as teat ends status in dairy cattle. OCRs are characterized by multiple categories recorded on a ranked scale that, while apprising relative order, is not informative of absolute magnitude of or proportionality between the categories. A number of statistically sound models for OCRs are available in the statistical literature, such as logistic regression and probit models, but these are commonly underutilized in practice. Instead, the ordinary least squares linear …


Issues In Testing Dna Methylation Using Next-Generation Sequencing, Douglas Baumann, R. W. Doerge 2011 Kansas State University Libraries

Issues In Testing Dna Methylation Using Next-Generation Sequencing, Douglas Baumann, R. W. Doerge

Conference on Applied Statistics in Agriculture

DNA methylation is an epigenetic modification known to affect gene expression, cellular differentiation, as well as phenotypes. Recent advancements in next-generation sequencing technologies have provided unparalleled insight into the location and function of DNA methylation in a variety of organisms. These data require vastly different statistical procedures than data from previous genomic-based technologies. We outline the biological and chemical processes involved in several approaches for gaining DNA methylation data. The implications of the differences between the approaches are discussed relative to the statistical methodology, and the use of genome annotation is explored for the purpose of improving the statistical power …


Editor's Preface And Table Of Contents, Weixin Yao 2011 Kansas State University Libraries

Editor's Preface And Table Of Contents, Weixin Yao

Conference on Applied Statistics in Agriculture

These proceedings contain papers presented in the twenty-third annual Kansas State University Conference on Applied Statistics in Agriculture, held in Manhattan, Kansas, May 01 - May 03, 2011.


A Comparison Of Spatial Prediction Techniques Using Both Hard And Soft Data, Megan L. Liedtke Tesar 2011 University of Nebraska-Lincoln

A Comparison Of Spatial Prediction Techniques Using Both Hard And Soft Data, Megan L. Liedtke Tesar

Department of Statistics: Dissertations, Theses, and Student Work

The overall goal of this research, which is common to most spatial studies, is to predict a value of interest at an unsampled location based on measured values at nearby sampled locations. To accomplish this goal, ordinary kriging can be used to obtain the best linear unbiased predictor. However, there is often a large amount of variability surrounding the measurements of environmental variables, and traditional prediction methods, such as ordinary kriging, do not account for an attribute with more than one level of uncertainty. This dissertation addresses this limitation by introducing a new methodology called weighted kriging. This prediction technique …


Use Of Remote Sensing, Hydrologic Tree-Ring Reconstructions, And Forecasting For Improved Water Resources Planning And Management, Cody Lee Moser 2011 University of Tennessee, Knoxville

Use Of Remote Sensing, Hydrologic Tree-Ring Reconstructions, And Forecasting For Improved Water Resources Planning And Management, Cody Lee Moser

Doctoral Dissertations

Uncertainties were analyzed in three areas (remote sensing, dendroclimatology, and climate modeling) relevant to current water resources management. First, the research investigated the relationships between remotely sensed and in situ Snow Water Equivalent (SWE) datasets in three western U.S. basins. Agreement between SWE products was found to increase in lower elevation areas and later in the snowpack season. Principal Components Analysis (PCA) revealed two distinct snow regions among the datasets and Singular Value Decomposition (SVD) was used to link both data products with regional streamflow. Remotely sensed SWE was found to be sufficient to use in statistically based forecast models …


An Exact Test For The Equality Of Intraclass Correlation Coefficients Under Unequal Family Sizes, Madhusudan Bhandary, Koji Fujiwara 2011 Columbus State University

An Exact Test For The Equality Of Intraclass Correlation Coefficients Under Unequal Family Sizes, Madhusudan Bhandary, Koji Fujiwara

Journal of Modern Applied Statistical Methods

An exact test for the equality of two intraclass correlation coefficients under unequal family sizes based on two independent multi-normal samples is proposed. This exact test consistently and reliably produced results superior to those of the Likelihood Ratio Test (LRT) and the large sample Z-test proposed by Young and Bhandary (1998). The test generally performed better in terms of power (for higher intraclass correlation values) for various combinations of intraclass correlation coefficient values and the exact test remained closer to the significance level under the null hypothesis compared to the other two tests. For small sample situations, sizes of the …


Extension Of Grizzle’S Classic Crossover Design, James F. Reed III 2011 Christiana Care Hospital System, Newark, Delaware

Extension Of Grizzle’S Classic Crossover Design, James F. Reed Iii

Journal of Modern Applied Statistical Methods

The crossover design compares treatments A and B over two periods using sequences AB and BA (the AB|BA design) and is the classic design most often illustrated and critiqued in textbooks. Other crossover designs have been used but their use is relatively rare and not always well understood. This article introduces alternatives to a randomized two-treatment, two-period crossover study design. One strategy, which is to extend the classic AB|BA by adding a third period to repeat one of the two treatments, has several attractive advantages; an added treatment period may not imply a large additional cost but will allow carryover …


A Range And Existence Theorem For Pseudomonotone Perturbations Of Maximal Monotone Operators, Vy Khoi Le 2011 Missouri University of Science and Technology

A Range And Existence Theorem For Pseudomonotone Perturbations Of Maximal Monotone Operators, Vy Khoi Le

Mathematics and Statistics Faculty Research & Creative Works

In this paper, we prove a range and existence theorem for multivalued pseudomonotone perturbations of maximal monotone operators. We assume a general coercivity condition on the sum of a maximal monotone and a pseudomonotone operator instead of a condition on the pseudomonotone operator only. An illustrative example of a variational inequality in a Sobolev space with variable exponent is given.


Estimation Of Population Mean In Successive Sampling By Sub-Sampling Non-Respondents, Housila P. Singh, Sunil Kumar, Sandeep Bhougal 2011 Vikram University, Ujjain, India

Estimation Of Population Mean In Successive Sampling By Sub-Sampling Non-Respondents, Housila P. Singh, Sunil Kumar, Sandeep Bhougal

Journal of Modern Applied Statistical Methods

The estimation of the population mean in mail surveys is investigated in the context of sampling on two occasions where the population mean of the auxiliary variable is available in the presence of non-response only for the current occasion in two occasion successive sampling. The behavior of the proposed estimator is compared with the estimator for the same situation but in the absence of non-response. An empirical illustration demonstrates the performance of the proposed estimator.


Number Of Replications Required In Monte Carlo Simulation Studies: A Synthesis Of Four Studies, Daniel J. Mundform, Jay Schaffer, Myoung-Jin Kim, Dale Shaw, Ampai Thongteeraparp, Pornsin Supawan 2011 New Mexico State University

Number Of Replications Required In Monte Carlo Simulation Studies: A Synthesis Of Four Studies, Daniel J. Mundform, Jay Schaffer, Myoung-Jin Kim, Dale Shaw, Ampai Thongteeraparp, Pornsin Supawan

Journal of Modern Applied Statistical Methods

Monte Carlo simulations are used extensively to study the performance of statistical tests and control charts. Researchers have used various numbers of replications, but rarely provide justification for their choice. Currently, no empirically-based recommendations regarding the required number of replications exist. Twenty-two studies were re-analyzed to determine empirically-based recommendations.


Improved Estimation Of The Population Mean Using Known Parameters Of An Auxiliary Variable, Rajesh Tailor, Balkishan Sharma 2011 Vikram University, Ujjain, M.P., India

Improved Estimation Of The Population Mean Using Known Parameters Of An Auxiliary Variable, Rajesh Tailor, Balkishan Sharma

Journal of Modern Applied Statistical Methods

An improved ratio-cum-product type estimator of the finite population mean is proposed using known information on the coefficient of variation of an auxiliary variate and correlation coefficient between a study variate and an auxiliary variate. Realistic conditions are obtained under which the proposed estimator is more efficient than the simple mean estimator, usual ratio and product estimators and estimators proposed by Singh and Diwivedi (1981), Pandey and Dubey (1988), Upadhaya and Singh (1999), and Singh, et al., (2004). An empirical study supports theoretical findings.


A Robust Root Mean Square Standardized Effect Size In One-Way Fixed-Effects Anova, Guili Zhang, James Algina 2011 East Carolina University

A Robust Root Mean Square Standardized Effect Size In One-Way Fixed-Effects Anova, Guili Zhang, James Algina

Journal of Modern Applied Statistical Methods

A robust Root Mean Square Standardized Effect Size (RMSSER) was developed to address the unsatisfactory performance of the Root Mean Square Standardized Effect Size. The coverage performances of the confidence intervals (CI) for RMSSER were investigated. The coverage probabilities of the non-central F distribution-based CI for RMSSER were adequate.


Double Acceptance Sampling Plans Based On Truncated Life Tests For Marshall-Olkin Extended Lomax Distribution, G. Srinivasa Rao 2011 Dill University

Double Acceptance Sampling Plans Based On Truncated Life Tests For Marshall-Olkin Extended Lomax Distribution, G. Srinivasa Rao

Journal of Modern Applied Statistical Methods

Double Acceptance Sampling Plans (DASP) is developed for a truncated life test when the lifetime of an item follows the Marshall-Olkin extended Lomax distribution. Probability of Acceptance (PA) is calculated for different consumer’s confidence levels fixing the producer’s risk at 0.05. Probability of acceptance and producer’s risk are illustrated with examples.


The Overall F-Tests For Seasonal Unit Roots Under Nonstationary Alternatives: Some Theoretical Results And A Monte Carlo Investigation, Ghassen El Montasser 2011 Manouba University, École Superieure de Commerce de Tunis, Tunisia

The Overall F-Tests For Seasonal Unit Roots Under Nonstationary Alternatives: Some Theoretical Results And A Monte Carlo Investigation, Ghassen El Montasser

Journal of Modern Applied Statistical Methods

In many empirical studies concerning seasonal time series, it has been shown that the whole set of unit roots associated with seasonal random walks are not present. This article focuses on the overall F-tests for seasonal unit roots under some nonstationary alternatives different from the seasonal random walk. The asymptotic theory of these tests is established for these cases using a new approach based on circulant matrix concepts. The simulation results joined to this theoretic analysis showed that the overall F-tests, as well as their augmented versions, maintained high power against the nonstationary alternatives.


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