Biology Commons^™

Comparison Of Calcified Structures To Estimate Ages Of Northern Pike Esox Lucius In Various Lakes, Kaed Rauk

Journal of Earth and Life Science

Northern pike Esox lucius are a dominant predatory fish in many aquatic systems. They can have significant impacts on the ecosystems they inhabit and are also a popular game fish among anglers. However, northern pike are a difficult species to age accurately. This study aimed to compare calcified aging structures to identify trends and determine which structure provides the most accurate age estimates. A total of 119 northern pike were sampled, and multiple structures from each fish were independently aged by two readers. The coefficient of variation (CV) was calculated for each structure to assess precision. Sectioned sagittal otoliths exhibited …

Size Structure Comparison Of Bluegill In Lakes With And Without Special Regulations, Jenna Lawin

Journal of Earth and Life Science

Lots of individuals have mixed feelings about special regulations for all sorts of game fish species such as northern pike Esox lucius, crappie Pomoxis spp., sunfish Lepomis spp., and so on. One species commonly sought after by many is bluegill Lepomis macrochirus. Bluegill are often deemed easy to find, catch, and clean. This study looks at three different categories of lakes (all lakes contain bluegill populations). The three categories are lakes with a five sunfish limit, lakes with a ten sunfish limit, and lakes without any special regulations. This study provides valuable insight into the size …

Ovipositional Behavior Of The Twig Girdler (Cerambycidae: Oncideres Cingulata) On Stems Of Mockernut Hickory (Carya Tomentosa) In Arkansas, R. Tumlison, L. Serviss

Journal of the Arkansas Academy of Science

The Twig Girdler (Cerambycidae: Oncideres cingulata) is a long-horned beetle that girdles stems of certain species of trees to prepare a habitat for its offspring. The stems eventually die, break, and fall from the tree, but the beetle usually had already laid its eggs within the stems. Eggs are laid singly, almost always at growth rings or leaf bases. Because the space for the young to develop is finite, laying too many eggs could cause reproductive failure and too few eggs would be suboptimal. We hypothesized that the female laying eggs should be able to evaluate the stem and …

Balancing Inquiry Based Learning And Direct Instruction, Sharon Liu , '26

Senior Theses, Projects, and Awards

No abstract provided.

Mechanisms Of Glyphosate Toxicity: Uptake, Mitochondrial Function, And Metabolism, Dionysios Patriarcheas

Graduate Theses, Dissertations, and Problem Reports (ETD)

Glyphosate, the most widely used herbicide in the world, is an inhibitor of chorismate biosynthesis, the precursor of aromatic amino acids. The target of glyphosate is absent in animals, but findings reporting toxicity in model organisms without a known mechanism or target are increasing. Saccharomyces cerevisiae is a useful and versatile model for understanding molecular mechanisms of toxicity. In yeast, previous work has shown that the aspartate/glutamate permease Dip5 is the proposed transporter for glyphosate and that mitochondrial metabolism has been implicated in response to glyphosate toxicity. This dissertation aimed to identify the effects of glyphosate on mitochondrial function through …

Studying The Mechanism For Ricin-Induced Growth Suppression, Daniel Judge

Graduate Theses, Dissertations, and Problem Reports (ETD)

This study focuses on ribosome-inactivating proteins (RIPs), a class of potent toxins that includes ricin, α-sarcin, and shiga toxin, which irreversibly damage large subunit rRNA. Although the catalytic activity of ricin toxin A chain (RTA) is well characterized, the precise mechanisms linking ribosome damage to altered cellular morphology remain poorly understood. In this study, we engineered a tetracycline-regulatable expression system to express RTA in Saccharomyces cerevisiae. We characterized the effects of RTA expression on yeast growth, viability, and reproductive potential. We demonstrated that our expression system produced rapid and robust RTA expression and ribosome depurination within less than one …

Exploring The Application Of Wastewater Monitoring To Determine The Prevalence And Diversity Of Influenza On The Campus Of West Virginia University, Lakyn Renee Sanders

Graduate Theses, Dissertations, and Problem Reports (ETD)

Influenza viruses (IV) affect populations globally, with the World Health Organization (WHO) estimating that IV are responsible for an estimated 3-5 million infections and 290,000 – 650,000 deaths annually^1–3. More specifically, the 2019-2020 IV season is associated with an estimated 38 million illnesses and 22,000 deaths in the United States alone⁴. IV are rapidly spread between individuals through direct contact with infected individuals, contaminated surfaces, or aerosolized virus particles². Traditional IV infection monitoring relies on clinical screening of patients presenting influenza-like symptoms, commonly through the use of multi-target panel tests such as the BioFire …

The Role Of Temperature And Carbon Source In Nutrient Acquisition For Peptidoglycan Synthesis In A Gfp-Expressing Borreliella Burgdorferi, Barrett-Anne Conner Briggs

Graduate Theses, Dissertations, and Problem Reports (ETD)

Lyme disease is the most common vector-borne disease in the United States with an estimated yearly incidence rate of more than 300,000 cases. Borreliella burgdorferi, the etiological agent of Lyme disease, is transmitted by the bite of an infected Ixodes scapularis tick and can cause debilitating pathologies affecting numerous body systems. Symptoms include fever, fatigue, joint pain, and a characteristic bull’s eye rash (erythema migrans) at the site of the tick bite. The timely and appropriate use of antibiotics effectively treats early Lyme disease; however, uncomfortable side effects reduce treatment compliance. If left untreated, long-term complications can arise including facial …

Effects Of Warmer Springs And Urbanization On The Nest Choice Of Temnothorax Ants, Keana Royce

Williams Honors College, Honors Research Projects

Climate change is altering winter and spring conditions in northeast Ohio, with urbanization and the urban heat island effect likely intensifying these changes. This preliminary study examined how Temnothorax ants alter nest-site preference in response to climate change and urbanization. I hypothesized that colonies exposed to warmed treatments would select hickory nuts to buffer against thermal/urban stressors. Identical in situ experimental setups were deployed at a rural site and an urban site and data collection occurred from late winter to early spring. Control colonies experienced ambient temperatures while experimental colonies were warmed +4°C above ambient temperatures. Colonies had the choice …

From Nesting To Emergence: Environmental Drivers Of Hatchling Success In Blanding’S Turtles And Implications For Management In Southeast Michigan, Morgan Boyer

Master's Theses and Doctoral Dissertations

Blanding’s turtles (Emydoidea blandingii) are long-lived turtles whose populations are highly sensitive to juvenile recruitment. We used intensive nest monitoring, microclimate logging, soil measurements, and local weather data at two Southeast Michigan sites to quantify how nest placement, incubation environments, and substrate conditions influence emergence success and hatchling condition. Nesting females were morphologically similar in size and produced average clutch sizes for the species (8 ± 2 eggs). Nest sites were found on relatively open, disturbed uplands with sandier soil substrates. Emergence success was generally high (≈ 70-80%) in nests protected from predation. Sandy loam had the highest success rates …

Love In The Fast Lane: Rapid Physiological Senescence At Sexual Maturity In Male Colorado Brown Tarantulas (Aphonopelma Hentzi), Spencer Poscente

Master's Theses and Doctoral Dissertations

Sexual dimorphism in longevity represents a striking example of natural selection favoring reproductive success over survival: in Colorado brown tarantulas (Aphonopelma hentzi), females live over two decades while males survive just months after reaching sexual maturity. I collected sexually mature males at three time points (August, September, October) across two years and quantified metabolic rates, locomotor performance, and survival under controlled laboratory conditions. This thesis comprises two articles examining complementary dimensions of that decline: metabolic senescence and locomotor performance. Open-flow respirometry revealed significant seasonal shifts: minimum metabolic rate increased through October, and metabolic scope peaked in September before declining. Survival …

Activity-Dependent Remodeling Of Muscle Architecture During Distinct Locomotor Behaviors In Caenorhabditis Elegans, Adina Fazyl, Akash Anbu, Sabrina Kollbaum, Andres G. Vidal-Gadea

Faculty Publications – Biological Sciences

Muscle structure is dynamically shaped by mechanical use, yet how distinct locomotor behaviors influence sarcomere organization remains poorly understood. In Caenorhabditis elegans, crawling and swimming constitute discrete gaits that differ in curvature, frequency, and mechanical load, providing a tractable model for studying activity-dependent remodeling. Using confocal imaging of phalloidin-stained body-wall myocytes, we quantified myocyte geometry, sarcomere length, and sarcomere number across anterior, mid-body, and posterior regions in animals reared exclusively under crawling or swimming conditions. Quantification and hypothesis testing used linear mixed models that accounted for repeated myocyte measurements within animals, with interaction terms testing region-specific effects of locomotor …

Presence Of Road Salts In Vernal Pools And Effects On Amphibian Development, Grace I. Bemis, Ella Mack

UNH URC Open (2026 and after)

Presence of Road Salts in Vernal Pools and Effects on Amphibian Development

Parasite Party: Investigating Ecological Drivers Of Trematode Parasite Prevalence Across The Isles Of Shoals, Aimee D. Bousquet, April Blakeslee, Amy Fowler, David Buck

UNH URC Open (2026 and after)

Parasite Party: Investigating Ecological Drivers of Trematode Parasite Prevalence Across the Isles of Shoals

Insight Into School-Based Tobacco Prevention Education In Arkansas School Districts, Faisal Khan

2026 Research Poster Competition

Insight into School-Based Tobacco Prevention Education in Arkansas School Districts [PD1] Henry Obajaja, Ashley Clawson, Kara Lasater, Victor Kwaku Akakpo, Kolade Olatunde, Luke Larsen, Faisal Khan, Page D Dobbs Characters: 2,500/2,500Select Category: Public Health Study Type: Cross-sectionalPresentation Type – Paper or Poster Funding – select University (College of Education and Health Professions WE CARE Initiative) Significance. Despite national declines in youth tobacco use, Arkansas, a Tobacco Nation state, continues to report disproportionately high rates of tobacco use among adolescents. Prior research found Arkansas school professionals identified student tobacco use as a top health concern; however, it is unclear what tobacco …

Dosage Sensitivity And The Evolution Of Dosage Compensation: Tests Of The Insensitive Sex Chromosome Hypothesis In Flour Beetles, Shana Pau

Biology Dissertations

Sex chromosome evolution generates imbalances in gene dosage that can disrupt gene expression and organismal function. These imbalances are often resolved through dosage compensation mechanisms, yet the factors that drive the emergence and diversity of these systems remain poorly understood. This dissertation addresses a central question in evolutionary genomics: what governs the evolution of dosage compensation?

Focusing on dosage sensitivity as a potential driver, I evaluate the Insensitive Sex Chromosome Hypothesis (ISCH), which predicts that chromosome-wide compensation is more likely to evolve in genomic contexts that are not depleted of dosage-sensitive genes. Using flour beetles (Tribolium spp.) as a …

Adolescent Development Of Pubertal Hormones, Reward Neurocircuitry, And Externalizing Behaviors And Internalizing Behaviors, Amber Jared

2026 Research Poster Competition

Title: Adolescent development of pubertal hormones, reward neurocircuitry, and externalizing behaviors and internalizing behaviors Authors: Amber Jared & Josiah K. Leong  Background: Adolescence is a period of rapid biological and brain development during which changes in pubertal hormones and neural reward systems may increase vulnerability to emotional and behavioral difficulties. Although prior research has documented widespread brain maturation during adolescence, less is known about how specific subcortical reward pathways develop and how these changes relate to hormones and behavior.  Methods:         Using longitudinal data from the Adolescent Brain Cognitive Development (ABCD) study, this project examines developmental changes in two key brain …

Social Isolation Predicts Altered Reward Circuit Connectivity And Future Behaviors In Adolescents, Mason Lucas

2026 Research Poster Competition

Adolescence is a period of transition from childhood to adulthood when people explore risky behaviors. Stressors during adolescence can change structural brain connectivity. Previous research has found weaker structural connectivity between reward circuits and future cognitive impairments among children raised in orphanages. Comparative research in mice suggests that social isolation after bullying can damage these connections and induce alcohol seeking. We tested whether social isolation was related to lower connectivity of targeted structural connections in adolescent humans. We analyzed data from the Adolescent Brain Cognitive Development study and found 130 subjects had experienced extreme social isolation. To evaluate the level …

From Chaos To Clockwork: Investigating The Role Of Circadian Genes In Metabolic Development Of 2nd And 3rd Instar Drosophila Larvae, Elliott Ruegsegger

2026 Research Poster Competition

Connecting deficits in circadian rhythm machinery to the severity of other health conditions is a common task that chronobiology, the study of physiological rhythms, undertakes. Disruptions to circadian rhythms and sleep are linked to increased risk of developing multiple different diseases, including Alzheimer’s Disease and obesity. Circadian rhythms are expressed at the molecular level through rhythmic variations in the concentration of specific proteins. While the central clock genes that produce these proteins, such as period and timeless, are evolutionarily conserved across the animal kingdom, not much is known about the consequences of disruptions in circadian rhythm machinery during early development, …

Moving Towards Defining The Evolutionarily Ancient Role Of Notch Signaling In Animals., Paige Norris

2026 Research Poster Competition

The notch signaling pathway is deeply conserved across animals from humans to sponges. It functions through direct cell-to-cell communication, where ligand binding triggers the cleavage of the Notch receptor’s intracellular domain (NICD), which then translocates to the nucleus to regulate transcription. In bilaterian lineages—animals with bilateral symmetry— Notch signaling is known to regulate binary cell fate decisions in diverse contexts ranging from neurogenesis to cancer. However, the functions of Notch signaling in early-branching animals, including cnidarians (e.g. jellyfish, corals and sea anemones), are still not fully understood; consequently, evolutionarily ancient roles of Notch remain ill-defined. To address this fundamental knowledge …

Methanogens On Asteroids?, Isabella Reimer

2026 Research Poster Competition

Methanogens on Asteroids? Introduction: It is conceivable that if methanogens, microorganisms in the domain Archaea, exist on Mars, they were seeded there from a piece of Earth that was ejected by a meteor impact sometime in the past, or that material from Mars seeded our home planet by the same mechanism. The hypothesis of panspermia, the idea that life could be transported from one planet to another through space, was first developed by Arrhenius in 1908 (1). Since then, the idea of lithopanspermia, the transfer of organisms in rocks such as meteors and asteroids, has become amenable to testing. Previous …

Investigating Pituitary Specific Transcription Factor-1 (Pit-1) In Neuronal Development In The Sea Anemone Cnidarian Nematostella Vectensis, Emily Ye

2026 Research Poster Competition

In bilaterians — animals with bilateral symmetry, like vertebrates and insects — the pituitary specific transcription factor-1 (pit-1) is essential for regulating growth hormone and prolactin expression in the pituitary gland. However, in non-bilaterians, the ancestral function of pit-1 remains unknown. Cnidarians, such as the sea anemone Nematostella vectensis, form a sister group to bilaterians and lack a pituitary gland, making them a powerful model for investigating the early evolutionary role of conserved developmental genes, like pit-1.Using CRISPR-mediated gene editing, pit-1 knockout mutants — anemones without the pit-1 gene — were generated, and their transcriptomic, cellular, and behavioral phenotypes were …

Investigating Changes In White Blood Cell Composition In Wild Hosts In Response To Viral Infection, Anna Bolding

2026 Research Poster Competition

Reservoir hosts play a critical role in the persistence and spillover of zoonotic pathogens. Upon infection, reservoir hosts can shed viral loads sufficient for transmission and spillover often without displaying apparent pathogenic effects. Investigating how their immune systems control infection can provide insights into the factors that facilitate spillover events. Understanding the mechanisms that enable these infection characteristics is crucial for informing public health and conservation strategies. Though reservoir hosts’ immune responses are well-documented in controlled laboratory settings, these studies are not representative of natural populations. The bank vole - Puumala hantavirus (PUUV) system is well suited for investigating such …

Examining Life Course Trends In Dental Tissues Measurements In Members Of The Cayo Santiago Macaque Colony, Tyler Moore

2026 Research Poster Competition

Dental tissue dynamics in primates are largely understood: as enamel wears with tooth use, tertiary dentin is laid down in response to cumulative (micro)traumas, compressing the internal pulp chamber and root canals. However, our knowledge of the rate and pattern of change in tissue quantities across the life course of primates remains incomplete, particularly in well-documented free-ranging populations. This study examined age- and sex-related variation in dental tissue surface area (SA) and volume (V) in a skeletal sample of rhesus macaques (Macaca mulatta) from the Cayo Santiago colony (Puerto Rico), a population with known life history data. Forty-six individuals were …

Effectiveness Of Occupational Recommendations In Maintaining Cognitive Function Under Hot-Dry And Warm-Humid Conditions, Zane Garner

2026 Research Poster Competition

National Institute for Occupational Safety and Health (NIOSH) recommendations dictate heat safety practices in occupations throughout the United States. Currently, the effectiveness of these recommendations is unknown. Likewise, there is a lack of consensus regarding the effect of combined heat and exercise stress on cognitive function. PURPOSE: To examine the effectiveness of NIOSH heat safety recommendations in maintaining cognitive function after moderate work in the heat, alongside whether the type of heat has any effect. METHODS: A counter balanced, repeated measures, randomized controlled trial was conducted to evaluate differences in cognitive function in two distinct environments. Participants completed two experimental …

A Chromosome-Level Assembly And Functional Genomic Resources For The Model Annelid Capitella Teleta, Billie E. Davies, Paul Gonzalez, Abhinav Sur, Jingcheng Wei, Tom Frankish, Jimena Montagne, Allan M. Carrillo-Baltodano, Kero Guynes, Yan Liang, Rory D. Donnellan, Travis Moreland R., Sumeeta Singh, Suiyuan Zhang, Reynold Yu, Tyra G. Wolfsberg, Néva Meyer, Elaine C. Seaver, Andreas D. Baxevanis, José M. Martín-Durán

Biology

The polychaete Capitella teleta is a primary model for evolutionary developmental biology, comparative genomics, conservation, and ecotoxicology. Although it was the first polychaete genome sequenced, the original assembly is outdated by modern standards. Here, we combine long-read and short-read sequencing with Hi-C chromatin conformation capture to assemble chromosome-level nuclear and mitochondrial genomes of the laboratory strain of C. teleta. This reference assembly accurately reflects the expected genome size (∼243.6 Mb) and contains a highly complete, evolutionarily conserved gene repertoire. Notably, the nuclear and mitochondrial genomes are heavily rearranged, indicating a decoupling between gene family repertoire and chromosomal evolution. The analyses …

Invasion Of Microplastics Into The Reproductive Tissues Of Feral And Domestic Felines, Emma K. Quade

Honors Undergraduate Theses

Although plastics have many useful properties in modern society, once these materials are introduced into the environment, they can cause extensive damage. Following degradation into microplastics (MP), plastic particles less than 5 mm in size, these contaminants can make their way into a variety of different environments and organisms. There are many studies that have investigated the prevalence of MP in marine environments, but fewer studies have looked into terrestrial systems, and even less that have focused on contamination in companion animals. This study sought to investigate the invasion of MP into the reproductive tissues of felines, Felis catus, …

Assessing The Impact Of Storing Water Samples At Ambient Temperature On Plankton Metabarcoding, Stephanie N. Lievano

Honors Undergraduate Theses

Increasing incidence of Harmful Algal Blooms (HABs) has led to fish kills, air quality hazards, and economic impacts. One economic impact is on tourism, one of the main sources of Florida’s income, where billions of dollars are lost to such events. The Florida Fish and Wildlife Conservation Commission Fish and Wildlife Research Institute (FWC-FWRI), with the help of collaborators, collects water samples from across the state for HAB monitoring. These samples are stored at ambient temperature for up to 24 hours which could directly affect data analyses. Here, in collaboration with FWRI-FWC, I investigated whether this storage technique affects plankton …

Detection And Quantification Of Spreading Depolarization In Drosophila Melanogaster Using High-Throughput, Wide-Field Brain Imaging, Wolfgang Stein, Allison L. Harris

Faculty publications – Physics

Spreading depolarization (SD) is a ubiquitous neural phenomenon implicated in mammalian neurological disorders including cerebral ischemia, brain death, stroke, brain injury, and migraine, as well as in insect chill coma. During SD, a breakdown of ion homeostasis and a slowly spreading wave of neural depolarization leads to processing deficits, such as sensory disturbances and paralysis. Our protocols introduce high-throughput techniques using wide-field fluorescence brain imaging in Drosophila melanogaster larvae and adults to detect and quantify the spatial and temporal dynamics of SD and its initiation points. Two SD initiation techniques, rapid cooling and pharmacological manipulation, are detailed. The larval protocols …

Coral Holobiont Lipidome Response To Global Change, Lauren Zane

Open Access Dissertations

Climate change is fundamentally restructuring macro-scale marine ecosystem structure and function by altering microscale metabolic processes and patterns of energy allocation. Scleractinian corals, as major ecosystem engineers, play outsized roles in ecosystem structure and function. They also occupy diverse habitats that differ in temperature regimes, light environments, hydrodynamics, and other environmental conditions, exposing corals to substantial spatial variation in stress and resource availability. Their fragile nutritional symbiosis with algal endosymbionts helps them navigate these environmental variations, but are also highly sensitive to environmental stress, particularly the timing and magnitude of water temperature changes. As pressure from environmental changes increases, the …