Biology Commons^™

Annotation Of Hypothetical Genes In Lactococcus Lactis Ssp. Il403, Jennifer A. Tangires

Student Scholar Showcase

The human gastrointestinal tract (GIT) harnesses various microbial organisms involved in almost all processes of physiological homeostasis, among these are lactic acid bacteria (LAB). These bacteria, almost all of which belong to the order Lactobacillales, are able to produce lactic acid, and play an important role in food preservation because they produce bacteriocins. Bacteriocins are antimicrobial proteins that are used to fight off related bacteria in their environment that are competing for the same resources. This study focuses on a specific LAB strain, Lactococcus lactis ssp. IL1403 where 21.9% of its predicted genes have not yet been assigned a function. …

Exploring Racial And Ethnic Disparities In Alzheimer's Disease And Related Dementias: Prevalence, Healthcare Utilization, And Costs, Michael E. Myers Ii

Doctoral Dissertations and Projects

Objective: This study aims to investigate the disparities in prevalence rates, healthcare utilization patterns, and healthcare costs associated with Alzheimer’s Disease and Related Dementias (ADRD) among various racial and ethnic groups over time. Methods: Utilizing data from the medical expenditure panel survey over a five-year period, this study employs factorial logistic regression to analyze ADRD prevalence rates and multivariate analysis of variance to examine healthcare utilization and costs. The analysis focuses on weighted populations to account for the representation of racial and ethnic groups, ensuring the generalizability of the findings. Results: The study identifies statistically significant disparities in ADRD prevalence, …

Sharpnose (Rhizoprionodon Terraenovae) Jaw, Juliana N. Ottens-Rivera, Fiona Smith, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from 76cm total length (TL) Rhizoprionodon genus (Sharpnose), collected from Anglers Bait & Tackle on Feb 5th, 2024, by Juliana Ottens-Rivera

Expression Of Human Arginine Vasopressin In Arabidopsis And Assessment Of Abiotic Stress Tolerance, Maitha Salem Aldarmaki

Thesis/ Dissertation Defenses

Human Arginine Vasopressin (HsAVP) is a nona-peptide that acts as an antidiuretic hormone. In human AVP regulates water permeability through the regulation of the water channel, aquaporin 2. The process begins with the binding of vasopressin to V2 receptor which activates cAMP-dependent protein kinase A (PKA). PKA phosphorylates aquaporin-2 at Ser256 and allows the aquaporin-2- containing vesicle to fuse with the apical membrane which increases water permeability. The present study describes the functional analysis of the codon-optimized HsAVP overexpressed in Arabidopsis thaliana. The main objective of the study is to assess if HsAVP affects drought and salinity stress tolerance of …

Age Estimation And Validation In Otoliths, Spines, And Fin Rays From Four Central Texas Fishes, Meredith B. Pfennig, Derek P. Crane, Nate G. Smith, Dave L. Buckmeier

Biology

Age estimation methods have not been validated for many species. Thus, we focused this age estimation study on four species from central Texas: the Guadalupe Bass Micropterus treculii, Channel Catfish Ictalurus punctatus, Gray Redhorse Moxostoma congestum, and Redbreast Sunfish Lepomis auritus. Our objectives for each species were to (1) investigate whether increments form annually in otoliths, fin rays, or spines; (2) determine the seasonal timing of zone deposition in each calcified structure; and (3) compare age estimates between otoliths and fin rays or spines.

Fish were sampled from central Texas waters and injected with oxytetracycline (OTC) quarterly in 2021. In …

Ammonium Chemotaxis In Chlamydomonas Reinhardtii, Gabela Nelson

LSU Doctoral Dissertations

Analysis of ammonium chemotaxis in Chlamydomonas reinhardtii is largely hindered, compared to that of phototaxis, despite equal importance on flagellated microalgal physiology. A major contribution of this shortfall is the lack of proper assay method. We developed a simple Petri dish assay method in which light is homogenously exposed while patterns of the cellular migration are tracked with a function of time. Using the method, new findings were revealed. First, this research presented that a strain lacking the eyespot organelle required for light gradient-sensing exhibits similar chemotactic behavior compared to a wild-type strain, suggesting Chlamydomonas sense an ammonium gradient not …

Veterinarian Perception Of The Impact Of Covid-19 On The Mortality Of Pets, Jason Bainbridge

Honors Theses

The pandemic led to many changes in society, changes that may have affected pets either directly or indirectly from the new way people had to live life. The primary variable of investigation is if the changes were significant enough to affect pets enough to see a trend in mortality. This thesis used a survey, sent out to veterinarians for their perspective, to see the effects the pandemic had on the mortality of pets, as well as any secondary variables. This survey had 38 responses, with 34 being eligible to complete the survey. The survey did not obtain the information of …

Increasing The Phytoremediation Efficiency Of Heavy Metal-Contaminated Soils In The Uae Using Endophytic Actinobacteria For Sustainable Agriculture, Archana Mathew Mathai

Thesis/ Dissertation Defenses

Pollution caused by heavy metals (HMs) is a major environmental concern worldwide. Human actions, agriculture practices and industrial activities can cause the release of HMs into the environment. Soil contamination with HMs may have negative effects on crops, thus disrupting the food chain and posing risks to human health. Lead (Pb) is a common pollutant found in soils when at high concentrations. Conventional land remediation techniques depending on chemical and mechanical methods are quite expensive and would lead to long-term deterioration of the ecosystems. Phytoremediation can serve as an alternative, eco-friendly approach to restore the lands for agricultural purposes. Hyperaccumulator …

Unravelling The Genetic Basis Of Schizophrenia, Clara Casey, John F. Fullard, Roy D. Sleator

Department of Biological Sciences Publications

Neuronal development is a highly regulated mechanism that is central to organismal function in animals. In humans, disruptions to this process can lead to a range of neurodevelopmental phenotypes, including Schizophrenia (SCZ). SCZ has a significant genetic component, whereby an individual with an SCZ affected family member is eight times more likely to develop the disease than someone with no family history of SCZ. By examining a combination of genomic, transcriptomic and epigenomic datasets, large-scale ‘omics’ studies aim to delineate the relationship between genetic variation and abnormal cellular activity in the SCZ brain. Herein, we provide a brief overview of …

Investigating The Antibacterial Properties Of Nanostructured Aluminum Surface, Quinshell Smith

Theses and Dissertations

Bacterial infections are a major public health concern. Bacterial infection can occur in any part of the body and can also cause the body to respond to its presence. Bacteria can be transferred to humans through water, food, air, and living vectors. The modes of transmission for bacterial infections are vectors, airborne, physical contact, and droplets. Current preventative measures have been put in place to combat this issue. These preventative measures include immunization of both animals and humans, personal hygiene measures, biocidal agents, and essential oils. Bacterial resistance has occurred due to these preventative measures being misused and overused. Bacteria …

An Exploration Of The Effectiveness Of Xanthorrhiza Simplicissima And Its Secondary Alkaloids As Antibiotics Against Staphylococcus Aureus With The Use Of Reserpine, Donald Bothe, Savita Chaurasia

Undergraduate Theses

Xanthorhiza simplicissima is a plant that is steeped in medical history. It has been used for hundreds of years by the Native Americans, and later by the Europeans, of Appalachia for its medicinal properties. One of the most useful medical applications of this plant are its antibiotic properties, as typified by its use as a tea that was consumed to treat mouth sores. These antibiotic properties can be attributed to some of its secondary alkaloids such as berberine, liriodenine, oxyacanthine, and magnoflorine. These compounds have been studied in other systems; however, oxyacanthine and magnoflorine have not been researched in tandem …

The Descent Of Anolis: Assemblages, Convergence, And Ecomorphological Evolution, Christopher G. Anderson

Biology ETDs

The evolutionary outcomes we observe in modern organisms, particularly associations between phenotypes and environments, have been and remain an invaluable tool in interpreting the biological phenomena that shape our world. In the following chapters, I leverage a comprehensive phylogenetic and morphological dataset for 351 species comprising a diverse group of arboreal lizards, the Anolis clade, to explore how communities and morphologies evolve. First, I characterized patterns among coexisting lineages of Anolis to reveal a general pattern of phylogenetic relatedness among lineages comprising assemblages and identify differences attributable to a biogeographic variable. Then I examined the morphological consequences associated with the …

Comparative Genomics Of Selected Lactobacillus Helveticus Strains, Cain Petty

Undergraduate Research Conference

My research is to compare two strains (D76 and H10) of Lactobacillus helveticus and a shared gene between them. I would want to experiment with overexpression to test for any difference in the regulatory function of genes associated with CggR - the central glycolytic genes regulator. The poster I am presenting would outline this and provide a clearer understanding of genes and potential overexpression.

Bec-1 Survey Of Parasites In Ictalurus Punctatus (Channel Catfish) Of The Savannah River Basin At Little River In Mccormick, South Carolina, Savannah Cade, Jason Lee

SC Upstate Research Symposium

Ictalurus punctatus, more commonly known as the Channel Catfish, is common throughout the Savannah River Basin. Fifteen specimens were captured by hook and line from the Little River in McCormick County, South Carolina. The gills and viscera were examined for metazoan parasites and prevalence and mean intensity were computed. The monogenean Ligictaluridus pricei and the copepod Ergasilus arthrosis were recovered from the gills. Two digenetic trematodes (Megalonia ictaluri and Alloglossidium corti), one tapeworm (Corallobothrium fimbriatum), two nematodes (Camallanus oxycephalus and Spinitectus carolini) and one acanthocephalan (Neoechinorhynchus cylindratus) were recovered from the …

Hgs-3 The Influence Of A Tandem Cycling Program In The Community On Physical And Functional Health, Therapeutic Bonds, And Quality Of Life For Individuals And Care Partners Coping With Parkinson’S Disease, Leila Djerdjour, Jennifer L. Trilk

SC Upstate Research Symposium

Purpose Statement: Several studies have shown that aerobic exercise can have a positive impact on alleviating symptoms experienced by individuals with Parkinson's disease (PD). Despite this evidence, the potential benefits of exercise for both PD patients and their care partners (PD dyad) remain unexplored. This research project investigates the effectiveness, therapeutic collaborations, and physical outcomes of a virtual reality (VR) tandem cycling program specifically designed for PD dyads.

Methods: Following approval from the Prisma Health Institutional Review Board, individuals with PD were identified and screened by clinical neurologists. The pre-testing measures for PD dyads (N=9) included emotional and cognitive status …

Effects Of Delayed Hca Exposure On A Rat Model Of Bipolar Disorder, Eden Comer, Natalie Olander

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Bipolar disorder (BD) is a neuropsychological disorder featuring cyclical periods of depressive and manic behaviors. The Chase lab aims to develop a reliable animal model for BD in order to characterize its critical neurological triggers. Previous work has shown that daily injection of rat pups from postnatal day 3 through 19 (P3-P19) with homocysteic acid (HCA) produces a mixed manic and depressive state after puberty. These behaviors can be reversed by lithium treatment and involve changes in gene expression in the prefrontal cortex that are also improperly regulated in BD. Despite this model's reproducibility, we observed critical changes in the …

The Behavioral Impacts Of Iron Oxide Nanoparticle Exposure On The House Sparrow (Passer Domesticus), John Wenderski, Brooke Fox, Jacob Bergstrom, Olivia Sprys-Tellner, Peyton Hallemann, Sarah Grimes

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

In response to a rapidly growing world population, there has been a dramatic increase in global urbanization and industrialization. With these increases comes increased air pollution, which includes metallic nanoparticles that are small enough to pass through an animal’s blood-gas and blood-brain barriers and cause damage. Some animals show behavioral changes in response to metallic nanoparticle exposure; for example, zinc oxide nanoparticle-exposed chicks displayed less antipredator behavior compared to controls. Additionally, mice injected with silver traveled less and more slowly than controls. Observationally, urban birds, compared to their rural conspecifics, tend to take more risks and explore more, which are …

Environment And Sexual Expression: Hormone-Induced Sex Change In Sexually Plastic Trees, Jillian Hickok, Colin Kalkman, Michael Laporte, Arsh Mir, Samantha Weaver

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

In a small number of species, plant sex expression is an environmentally determined characteristic and can change throughout the organism’s lifetime. This plastic response to environmental changes has important and intrinsically interesting ecological and evolutionary implications, but is as yet an understudied phenomenon. In particular, little is known about the proximate hormonal cues that mediate plastic sex determination. This study examines the impact of selective hormonal treatment on sex expression in a sexually plastic tree species, Acer Pensylvaticum, with the aim of further elucidating this idiosyncratic process. Live A. pensylvanicum twig samples were taken from five trees in Sleeping …

Understanding The Role Of Serine 26 Phosphorylation Changes In Peroxidemediated Trafficking Of System XC- To The Cell Membrane, Katherine Lane

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Composed of xCT and 4F2HC, System x_c^- is involved in importing cystine and exporting glutamate from the cell. xCT is directly involved in cystine-glutamate transport, and 4F2hc is responsible for stabilizing and moving xCT onto the cell membrane. Previous studies found that phosphorylating serine 26 (S26) on xCT inhibits xCT activity by moving system x_c^- off the cell membrane into lysosomes to be degraded (Figure 1). A previous study by the Chase lab showed that treating COS7 cells with hydrogen peroxide (H2O2) led to significantly higher amounts of xCT on the cell membrane. The objective of …

Investigating Auditory And Visual Seasonality In House Finches, Ashley Lauraine, Hannah Peterson, Jordan Winters

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Many birds receive both visual and auditory signals in mate selection, such as plumage color and song differences within conspecifics, which has implications for behavioral and communication processes. This processing of stimuli from different systems as a combined signal is also known as multimodal sensory processing. Sex hormone levels correlating with reproduction efforts vary seasonally in temperate animals, leading to changes in sensory processing as well. As the seasons progress, sex hormones (i.e. estrogen and testosterone) fluctuate, and an increase or decrease in these hormones has shown an impact on hearing in songbird species, however, less is known about the …

Implications Of Iron Oxide Nanoparticle Exposure On The Auditory Physiology And Iron Bioaccumulation In House Sparrows (Passer Domesticus), Shae Johnston, Peyton Hallemann, Olivia Sprys-Tellner

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Air pollution (including particulate matter, PM) has increased as a result of a dramatic increase in urbanization. Nanoparticles within PM can be detrimental to health when inhaled., because they are small enough to bypass the blood-brain and blood-gas barriers, and can potentially accumulate in organs within the organism. For example, previous work has linked bioaccumulation of iron oxide nanoparticles (IONPS) to cancer and organ poisoning. Interestingly, in model organisms, nanoparticle exposure has also been linked to hearing deficits, suggesting that decline in hearing may be an early bioindicator of future health consequences. While the specific mechanism for this hearing deficit …

Explorehope Summer Camps: Amazing Animal Abilities, Hannah Sturgeon, Alyssa Archer, Ashley Lauraine

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

Did you know that mice can hear sounds that humans cannot? Or that birds and bees can see colors we can only dream of? ExploreHope is an organization on the Hope College campus that has been hosting summer camps for elementary to high school level students for 27 years. The ExploreHope Amazing Animal Abilities camp for students in grades 6 through 9 will explore the many incredible sensory abilities of animals. This camp will teach participants about a vast variety of sensory systems observed across the animal kingdom including the visual, auditory, and olfactory systems, mechanoreception and kinesthetics, and the …

The Effects Of Vasopressin On Aquaporin-1 Expression And Localization In The Presence And Absence Of Vacm-1/Cul5, Parker Friend, Rachel Amicucci

23rd Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2024)

The vasopressin-activated calcium mobilizing (VACM-1/Cul-5) protein plays a role in the E3 ubiquitin ligase system which is involved in the destruction of specific proteins. Our focus is on the impact that the (VACM-1/Cul-5) protein has on other proteins' expression and localization within human umbilical vein endothelial cells (HUVEC). One of the proteins of interest to us is aquaporin-1 (AQP1). AQP1 is a water transporter that impacts cell growth and angiogenesis. To evaluate how the presence of VACM-1/Cul5 impacts AQP1, cells with and without the VACM-1/Cul5 gene are analyzed in the presence of increased vasopressin. VACM-1/Cul5 is knocked out of the …

Hormetic Modulation Of On Mtor Mitochondria Cross Talk For Mitigation Of Cellular Aging, Mahalakshmi R

Theses and Dissertations

Cellular aging is a gradual process involving structural and functional deterioration of cells. Mitochondria, the biological clock in cells, are known to play a crucial role in the progression of cell aging. According to the mitochondrial free radical theory of aging, oxidative phosphorylation in the mitochondria produces free radicals, such as, reactive oxygen species (ROS), which lead to oxidative stress in cells. This, in turn, results in mitochondrial dysregulation, and eventually causes degeneration of cellular components, thereby propagating cell aging. However, it is to be underscored that aging, at its core, is a multifaceted phenomenon that involves a number of …

Evaluation Of Seizure Recognition And First Aid Training Course And Improving Self-Efficacy Related To Medical Emergencies In Mississippi, Anna Katherine Herrington, Collin Earl Wayne Crawson, Daniel Robert Zuckerman

Honors Theses

Within recent years, there has been increased attention to the growing physician shortage across the United States. This shortage has placed substantial strain upon regions of lower healthcare access, particularly those of rural regions such as much of the state of Mississippi. As rural healthcare providers are placed under more strenuous conditions, they encounter issues of increased patient volume, lack of a trauma team, or adequate transportation to higher-level care facilities. These issues may exacerbate the present inequities in cost of living, access to adequate healthcare, and the distress caused by these concerns. Individuals with epilepsy are one cohort with …

Chemical-Mediated Mate Attraction In Clover Root Curculio; Sitona Hispidulus (F.), A Below Ground Pest, Kristin Leutgeb

Student Research Symposium

Few control options

• Registration of broad-spectrum soil fumigant insecticides discontinued
• Effective monitoring is time- and resource-intensive

Crop damage from feeding on root nodules by soil-dwelling CRC larvae

• Nodules are a symbiotic relationship between the plant and rhizobia, which provide nitrogen to the plant host
• Curculionid beetles can sense the nodules

Mating by pheromones. CRC produces contact and volatile chemicals for mating and egg laying (oviposition).

• Utilize pheromone during active mating above ground

Effects Of Fungal Biopesticide Doses On Mortality In Bumble Bees, Colton Burris

Undergraduate Research Symposium

Agricultural practices often include the use of pesticides to produce meaningful crop yields. While the pesticide may be used to target “pest” insects (e.g. thrips, aphids, whiteflies), it can also have negative effects on important pollinating insects such as bees. Neonicotinoid pesticides have been found responsible for widespread decline in bee biodiversity, and were even banned in Europe (Sgolastra et al. 2020) . Beauveria bassiana, sold as Botanigard, on the other hand, is a fungal biopesticide that is marketed to be a safer alternative for bees, and has been found to have other possibly harmful effects to the inner …

A New Genetic Tool For Quorum-Sensing Ba, Amelia Markwell

Undergraduate Research Conference at Missouri S&T

This current research project focuses on the use of cell-to-cell communication in Bacterial Strain competition, specifically in soybean plants. Soybean plants are a high-yield crop produced here in the midwest, bringing in more than 8 billion dollars in monetary output for our state. The lab work focuses on one specific bacteria strain farmers commonly find in soybeans; this is called Bradyrhizobium japonicum. This nitrogen-fixing bacteria improves plant growth drastically. Cells have a way of communicating with each other in order to share information and adjust gene regulation accordingly. This is known as quorum sensing. My research last year focused on …

Molecular Genetics And Phylogeny Of Bigmouth Shiner, Notropis Dorsalis, James Ramette, Patrick Appiah, Shila Koju, Jacqueline Kluba, Heath St, Dennis, Christian Bigler, Robert Hrabik, David D. Duvernell

Undergraduate Research Conference at Missouri S&T

The study of North American freshwater ichthyofauna reveals a diversity shaped by the continent's geologic past and the extensive effects of Pleistocene glaciation on river systems. Ericymba dorsalis (Bigmouth 69 Shiner) is a minnow species with a broad distribution in the Mississippi River basin from Wyoming to New York. Despite exhibiting consistent morphological features across its range, the species' widespread northern distribution suggests the potential existence of multiple, genetically distinct lineages. This research tested the hypothesis that separate drainage systems harbor genetically distinct groups of E. dorsalis. Our results identified five clades, each associated with major drainages. Populations of the …

Silent Bystanders Facing Bias. Is Silence Always Harmful, Sophie Firle

Undergraduate Research Conference at Missouri S&T

In STEM, women face bias that lowers their sense of belonging, identity safety, and self-esteem. These biases often occur in daily interactions with male peers in STEM, such as subtly sexist comments that doubt women's competence in STEM. A previous study that we conduction titles "Effects of Ally Confrontation on Target Outcomes" tested whether a subtly sexist comment that was confronted by a male ally would help increase women's sense of belonging, identity safety, and self-esteem relative to when a male bystander remained silent and did not confront the comment. We found that confrontation does help women feel better than …