Bioresource and Agricultural Engineering Commons^™

The Effect Of Relative Humidity On Eddy Covariance Latent Heat Flux Measurements And Its Implication For Partitioning Into Transpiration And Evaporation, Weijie Zhang, Martin Jung, Mirco Migliavacca, Rafael Poyatos, Diego G. Miralles, Tarek S. El-Madany, Marta Galvagno, Arnaud Carrara, Nicola Arriga, Andreas Ibrom, Ivan Mammarella, Dario Papale, Jamie R. Cleverly, Michael Liddell, Georg Wohlfahrt, Christian Markwitz, Matthias Mauder, Eugenie Paul-Limoges, Marius Schmidt, Sebastian Wolf, Christian Brümmer, M. Altaf Arain, Silvano Fares, Tomomichi Kato, Jonas Ardö, Walter Oechel, Chad Hanson, Mika Korkiakoski, Sébastien Biraud, Rainer Steinbrecher, Dave Billesbach, Leonardo Montagnani, William Woodgate, Changliang Shao, Nuno Carvalhais, Markus Reichstein, Jacob A. Nelson

Department of Agricultural and Biological Systems Engineering: Faculty Publications

While the eddy covariance (EC) technique is a well-established method for measuring water fluxes (i.e., evaporation or 'evapotranspiration’, ET), the measurement is susceptible to many uncertainties. One such issue is the potential underestimation of ET when relative humidity (RH) is high (>70%), due to low-pass filtering with some EC systems. Yet, this underestimation for different types of EC systems (e.g. open-path or closed-path sensors) has not been characterized for synthesis datasets such as the widely used FLUXNET2015 dataset. Here, we assess the RH-associated underestimation of latent heat fluxes (LE, or ET) from different EC systems for 163 sites in …

Spray Characterization Of An Unmanned Aerial Vehicle For Agricultural Spraying, Eray Önler, Hasan Berk Özyurt, Mehmet Şener, Sezen Arat, Bülent Eker, İlker Hüseyin Çelen

The Philippine Agricultural Scientist

Sustainability and higher efficiency in crop production are possible with the use of new technologies. The use of unmanned aerial vehicles (UAVs) brings many advantages, both in terms of monitoring agricultural areas and pesticide applications, and allows for early disease and damage detection as well as its application in areas without access to conventional sprayers. This study established parameters for spraying with clean water using a DJI Agras 14 MG-1P (RTK) UAV. Droplet distribution and droplet analyses were examined in the experiments carried out at different heights (1.5, 2.0, and 2.5 m) and flow rates (10, 15, 20, 25, and …

Metabolic Network Modeling To Unravel The Impact Of Copper Deficiency And High-Fat Diet On Liver Metabolism, Naeun Lee

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Fatty liver disease is a common health problem caused by an imbalance in the intake, utilization, and distribution of energy. High-fat and high-carbohydrate diets have been identified as major risk factors for fatty liver disease. Other contributors and modifiers can also influence the development of liver damage. Intriguingly, inappropriate copper (Cu) levels in the diet and organs are associated with fatty liver disease, though the exact way in which Cu deficiency or toxicity contributes to metabolic issues is not yet clear. Cu is necessary for several biological processes, including energy production and redox balance. Further research should be taken to …

Secreted Metabolome Of Porcine Blastocysts Encapsulated With In In Vitro 3d Alginate Hydrogel Culture Systems Under Going Morphological Changes Provides Insights Into Specific Mechanisms Involved In The Initiation Of Porcine Conceptus Elongation, Sophie C. Walsh, Jeremy R. Miles, Corey D. Broeckling, Lea A. Rempel, Elane C. Wright-Johnson, Angela K. Pannier

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Context. The exact mechanisms regulating the initiation of porcine conceptus elongation are not known due to the complexity of the uterine environment. Aims. To identify contributing factors for initiation of conceptus elongation in vitro, this study evaluated differential metabolite abundance within media following culture of blastocysts within unmodified alginate (ALG) or Arg-Gly-Asp (RGD)-modified alginate hydrogel culture systems. Methods. Blastocysts were harvested from pregnant gilts, encapsulated within ALG or RGD or as non-encapsulated control blastocysts (CONT), and cultured. At the termination of 96 h culture, media were separated into blastocyst media groups: non-encapsulated control blastocysts (CONT); ALG …

The Impact Of Organized Activism On Technology Sharing, Ahmed Chennak, Amalia Yiannaka

Cornhusker Economics

What factors influence a firm's decision to share its technology with competitors? While patent licensing has received considerable attention in the literature, studies have typically focused on the optimal licensing contract for product and process innovations in various market settings. A key finding of this literature is that the optimal licensing strategy depends on the type of the patentee; that is, whether the patentee is a producer in the market (insider patentee) or not (outsider patentee). Little attention has been given, however, to the role the general public can play on firms' incentives to share their innovations through licensing contracts …

Co-Culture Models Of Endothelial Cells, Macrophages, And Vascular Smooth Muscle Cells For The Study Of The Natural History Of Atherosclerosis, Martin Liu, Saurabhi Samant, Charu Hasini Vasa, Ryan M. Pedrigi, Usama Oguz, Sangjin Ryu, Timothy Wei, Daniel R. Anderson, Devandra K. Agrawal, Yiannis Chatzizisis

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Background

This work aims to present a fast, affordable, and reproducible three-cell co-culture system that could represent the different cellular mechanisms of atherosclerosis, extending from atherogenesis to pathological intimal thickening.

Methods and results

We built four culture models: (i) Culture model #1 (representing normal arterial intima), where human coronary artery endothelial cells were added on top of Matrigel-coated collagen type I matrix, (ii) Culture model #2 (representing atherogenesis), which demonstrated the subendothelial accumulation and oxidative modification of low-density lipoproteins (LDL), (iii) Culture model #3 (representing intimal xanthomas), which demonstrated the monocyte adhesion to the endothelial cell monolayer, transmigration into the …

Soil Water Sensors For Irrigation Scheduling In The United States: A Systematic Review Of Literature, Sumon Datta, Saleh Taghvaeian

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Soil water sensors (SWS) have been widely researched and practiced for irrigation scheduling. Due to popularity of this approach, there is a need for frequent reviews of the SWS literature to keep the researchers, extension professionals, and end-users updated and to help with defining and modifying future directions. In addition, existing literature reviews do not systematically report and summarize the results of previous studies. To address this gap, a systematic review was carried out to identify and analyze related literature published in the United States in the past two decades. Two focus areas were SWS accuracy assessment and SWS application …

Evaluation Of Artificial Intelligence Algorithms With Sensor Data Assimilation In Estimating Crop Evapotranspiration And Crop Water Stress Index For Irrigation Water Management, Abia Katimbo, Daran Rudnick, Jingwen Zhang, Yufeng Ge, Kendall C. Dejonge, Trenton E. Franz, Yeyin Shi, Wei‑Zhen Liang, Xin Qiao, Derek M. Heeren, Isa Kabenge, Hope Njuki Nakabuye, Jiaming Duan

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Irrigation water management using automated irrigation decision support system (IDSS) as a smart irrigation scheduling tool can improve water use efficiency and crop production, especially under circumstances of limited water supply. The current study evaluated the performance of different artificial intelligence (AI) algorithms and their ensembles in forecasting Crop Evapotranspiration (ET_c) and Crop Water Stress Index (CWSI) against calculated single crop coefficient FAO56 ET_c and Jackson’s theoretical CWSI, respectively. Soil moisture, canopy temperatures (T_c) and Normalized Difference Vegetation Index (NDVI) were all measured from irrigated and non-irrigated maize plots in West Central Nebraska during 2020 …

Role Of Social Network On Technology Adoption: Application To Nebraska Producers In The Face Of Undesirable Vegetation Transitions, Sabrina Gulab, Holly K. Nesbitt, Simanti Banerjee, Theresa Floyd, Karina A. Schoengold

Cornhusker Economics

Conclusion

Producers need to have access to information regarding new conservation practices and technologies to ensure land management in the face of ecological threats in general and vegetation transitions (VTs) in the context of our study. This study investigates the role of an individual producer's social network on the willingness to seek information about technologies and management practices and the likelihood of new technology adoption with special attention to risk attitudes and producer spillover effects. Our results provide evidence that network composition and information obtained through a producer's social network don't influence an individual's willingness to seek information about new …

Clutch Analysis And Design For The Wildcat Pulling Team Quarter Scale Tractor Drivetrain, Lauren Doyle

Lewis Honors College Thesis Collection

The University of Kentucky (UK) Wildcat Pulling Team competes in the annual ASABE International Quarter Scale Tractor Student Design Competition. In 2022 the team placed 3rd overall in the competition, missing 1st place by 23 points. The loss in points was due to the clutch subassembly having issues related to maneuverability, manufacturability, and serviceability. The goal of this project was to redesign the 2022 tractor’s drivetrain for the new 2023 competition tractor. Background research was conducted on three types of clutches: manual, electric, and centrifugal. The electric clutch and centrifugal clutch with manual override were tested to determine their viability …

Complab V1.0: A Scalable Pore-Scale Model For Flow, Biogeochemistry, Microbial Metabolism, And Biofilm Dynamics, Heewon Jung, Hyun-Seob Song, Christof Meile

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Microbial activity and chemical reactions in porous media depend on the local conditions at the pore scale and can involve complex feedback with fluid flow and mass transport. We present a modeling framework that quantitatively accounts for the interactions between the bio(geo)chemical and physical processes and that can integrate genome-scale microbial metabolic information into a dynamically changing, spatially explicit representation of environmental conditions. The model couples a lattice Boltzmann implementation of Navier–Stokes (flow) and advection–diffusion-reaction (mass conservation) equations. Reaction formulations can include both kinetic rate expressions and flux balance analysis, thereby integrating reactive transport modeling and systems biology. We also …

Evaluation Of Cytocompatability And Safety Of Nerve Retraction Compounds For Local Disc Denervation To Treat Disc-Associated Low Back Pain, Fei San Lee, Uyen N. Nguyen, Rebecca A. Wachs

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Low back pain (LBP) is the leading cause of disability worldwide. Aberrant nerve growth into intervertebral discs is a common pathological feature of disc-associated LBP. Current treatments rely on short-term solutions using opioids or anti-inflammatory prescriptions which can lead to addiction and side effects, respectively. We hypothesize that removal of aberrant nerve fibers in the disc using nerve retraction compounds can alleviate discassociated LBP. We performed screening of nerve retraction compounds using adult rat dorsal root ganglia (DRG) explant culture in hydrogels to mimic disc innervation in vitro. Capsaicin, known to induce nerve retraction, was used as a positive control …

A Methodology To Optimize Site-Specific Field Capacity And Irrigation Thresholds, Hemendra Kumar, Puneet Srivastava, Jasmeet Lamba, Bruno Lena, Efstathios Diamantopoulos, Brenda Ortiz, Bijoychandra Takhellambam, Guilherme Morata, Luca Bondesan

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The determination of field capacity (FC), irrigation thresholds, and irrigation amounts is characterized by site-specific soil hydraulic properties (SHPs). This study, conducted in two zones (zone 1 and zone 2) delineated based on soil, topography, and historical crop yield in Alabama (USA), focused on determining zone-specific FC using negligible drainage flux (q_fc) criterion. The HYDRUS-1D model was used to optimize zone-specific SHPs using measured soil matric potential (h). The zone-specific FCs were determined using optimized and raw SHPs at 0.01 cm/day as q_fc. The results showed that the optimized FC at q_{fc …}

Agricultural Machinery Operator Monitoring System (Ag-Oms): A Machine Learning Approach For Real-Time Operator Safety Assessment, Terence Irumva, Herve Mwunguzi, Santosh Pitla, Bethany Lowndes, Aaron Yoder, Ka-Chun Siu

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The 2015 CS-CASH (Central States Center for Agricultural Safety and Health, 2015) Injury Surveillance Surveys showed that around 19% of injuries to agricultural producers are related to tractors or large agricultural machinery, yet only a limited number of studies are found that address tools and methods for monitoring safety behaviors of agricultural machinery operators in real-time. The current safety behavior monitoring approaches require an in-person presence, which can be both time- and cost-inefficient, and the other available methods lack a feedback element to alert operators in realtime. As a result, the research presented in this study aimed to develop an …

Goniometer In The Air: Enabling Brdf Measurement Of Crop Canopies Using A Cable-Suspended Plant Phenotyping Platform, Geng Bai, Yufeng Ge, Bryan Leavitt, John Gamon, David Scoby

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The Bidirectional Reflectance Distribution Function (BRDF) quantifies the distribution of the spectral reflectance of a target surface at various viewing and illumination angles. In-field measurement of the BRDF of vegetation canopies improves the characterization of offnadir measurements and informs radiative transfer models of canopy reflectance, where the Lambertian assumption does not hold. However, current field goniometers are unable to measure BRDF efficiently, especially for tall vegetation across the growing season because of the limitations of clearance, field accessibility, and flexibility of the sensor field of view. In this study, we explored the potential of using a large-scale cable-suspended field phenotyping …

A Process Intensification Approach To Improve Volatile Fatty Acids Production, Extraction, And Valorization, Can Liu

Theses and Dissertations--Biosystems and Agricultural Engineering

Anaerobic digestion (AD) is a widely used biowaste conversion method. Recent studies have explored arrested methanogenesis as an alternative approach to leverage existing AD facilities and produce volatile fatty acids (VFAs) instead of biogas. VFAs have been recognized as precursors for a range of value-added chemicals and bioproducts. Arrested methanogenesis involves inducing acidic fermentation by halting the AD process before methanogenesis. It has been found that higher organic loading and thermophilic conditions enhance VFA accumulation and stabilize the acidic fermentation (AF) system.

Brewer's spent grain (BSG), a significant by-product of the brewing industry, was employed as the feedstock for VFA …

Closing The Modern Irish Municipal Wastewater Phosphorus Cycle, Ciaran O’Donnell

Theses

Phosphorus (P) is an essential life-supporting nutrient for which there is no substitute. P naturally cycles within nature. Modern farming practice and food production have altered the natural P cycle. Successive crop harvests remove P from the soil as crops and transport them to urban areas to feed the population. To replace P removed from the soil through these crop harvests, mineral P fertilisers are applied to the soil to sustain crop production. Mineral P fertilisers are derived from finite phosphate rock. The European Union does not have an indigenous supply of phosphorus rock, which poses a significant issue for …

Nanopesticide Influence On Nitrogen Cycling In Soils, Jacob Richardson

Theses and Dissertations--Biosystems and Agricultural Engineering

Nanotechnology has several applications in the agricultural industry, as the small size of nanoparticles and high reactivity enables targeted delivery of pesticides and fertilizers to the intended crop. Copper-based nanopesticides such as Kocide, are proposed as a more efficient method for targeted pest control. Despite the potential benefits of nanopesticides, little is known regarding the transport and implications of nanopesticides under long-term inundation conditions often found in downstream wetlands. Specifically, the impact of nanopesticides on microbial nitrogen processes in wetland environments remains unknown. Therefore, this thesis explores the impact of nanopesticides, specifically Kocide, on microbial nitrogen cycles in agricultural and …

Densification Of Hemp Floral Biomass Pre And Post-Extraction: Determination Of Pellet Physical Characteristics, Gary Lopez

Theses and Dissertations--Biosystems and Agricultural Engineering

The production of cannabidiol (CBD) from the floral material of Cannabis sativa L.is of great interest to the hemp industry. The low bulk density oh hemp floral material presents challenges in terms of storage and handling. To improve handling and storage characteristics, both intact (pre-extraction) and supercritical CO₂ extracted hemp floral materials were pelletized. Intact floral material (BaOx) was passed through a hammer mill with a 5 mm screen; while, extracted floral material (Hawaiian Haze) was ball milled through a 60 mesh (250 microns) prior to extraction. Pelletization was conducted using a 3.7 kW pilot scale flat ring …

Impact Of Physicochemical Characteristics And Distillation Parameters On The Biomethane Potential Of Bourbon Stillage, Danielle Hockensmith

Theses and Dissertations--Biosystems and Agricultural Engineering

Bourbon, or whiskey, production in Kentucky has been estimated to double within the next five years and an increase in the main by-product from bourbon distillation, stillage. Stillage is composed mostly of water along with the fermented grains after distillation. Stillage is expensive to dispose of and difficult to store due to the high biodegradability, posing a risk to the environment given the low pH and high chemical oxygen demand (COD). Anaerobic digestion has been identified as a potential solution for stillage valorization, but little research has been performed. Stillage from different mash bills has varying physicochemical properties, total solids …

Fate And Transport Of Emerging Contaminants Entering, Leaving, And Flowing Past Wastewater Treatment Plants In Central Kentucky, Kyra Sigler

Theses and Dissertations--Biosystems and Agricultural Engineering

Per- and polyfluoroalkyl substances (PFAS) and neonicotinoid insecticides are two classes of emerging contaminants that have been recently detected in many environmental compartments. Both have been associated with negative impacts on humans and the environment. Wastewater treatment plants (WWTPs) have been identified as likely hotspots for introduction of these contaminants into the environment. Thus, the aim of this study was to investigate the occurrence of PFAS and neonicotinoids in two WWTPs in Central Kentucky. Polar organic chemical integrative samplers (POCIS) were deployed in WWTP influent and effluent and placed upstream and downstream of the effluent mixing zone (EMZ) for two …

Microalgae Immobilization With Filamentous Fungi: Process Development For Sustainable Food Systems, Suvro Talukdar

Theses and Dissertations--Biosystems and Agricultural Engineering

Demand for sustainable food sources has increased because of the rapid growth of the world's population.  In this study, microalgae cells of Haematococcus pluvialis were immobilized using the edible fungal strain Aspergillus awamori for potential food applications. The study investigated the impact of fungal loading, pellet geometry, and initial microalgae cell concentration on the immobilization performance and product characteristics. It was found that higher fungal loading and larger fungal pellets contributed to increased immobilization performance while increased initial microalgae concentration inhibited the process. Larger fungal pellets had decreased biomass density, which led to decreased surface concentration of immobilized microalgae but …

Fate And Transport Of Nanopesticides In Agricultural Field Plots In Central Kentucky, William D. Rud

Theses and Dissertations--Biosystems and Agricultural Engineering

Due to a growing world population, pesticide applications are necessary part to increasing agricultural production on the same arable land, but this has created environmental contamination, human toxicity, and endangerment to non-target species (i.e, honeybees, monarch butterflies) from bulk pesticide application. Nanoengineered particles or ENP are a potential solution with increased efficiency, longer duration, and enhanced stability of pesticides due to their unique formulations at smaller sizes. However, the potential long-term impact to agroecosystems is still unknown. Therefore, the goal of this project was to evaluate the fate, transport, impact, and persistence of two commercially available nanopesticides (copper hydroxide and …

Applying Hermetic Storage And Multiple Abiotic-Stressed Germinations To Actuate Desirable Effects In Wheat Phytochemistry, Food, And Biological Functionalities, Bababode Kehinde

Theses and Dissertations--Biosystems and Agricultural Engineering

Wheat is one of the most widely consumed staple foods in the world, supplying both nutritional and caloric requirements for billions of people. The rising global population and increased food demand behooves all stakeholders across the wheat supply chain to significantly increase their output and efficiency. Beyond the target for increased farm yields, dietary, nutritional, and health requirements along with their continuous supply must be satisfied with improved storage and processing schemes. Post-harvest changes in wheat can result in a significant reduction in its quality. Such losses could be qualitative and/or quantitative, impacting its physical, physiological, organoleptic, and nutritional attributes. …

Improving Indoor Arenas For The Equine Industry, Staci Mcgill

Theses and Dissertations--Biosystems and Agricultural Engineering

Equine indoor arenas are a unique infrastructure investment found at equine farms and facilities. They are semi-indoor structures for exercising horses, exhibiting skills during competitive events, and other equine related activities. These spaces do not always include mechanical ventilation or stirring fans and occupancy by horses and humans can be sporadic and inconsistent, which creates a challenging space for understanding and predicting airflow. Typically, indoor arenas have a sand-based footing over which the horse travels. The impact of the hooves can cause dust to become a concern within the facilities. Environmental concerns within these facilities (temperature, respirable dust, moisture, and …

Unmanned Aircraft Systems For Precision Meteorology: An Analysis Of Gnss Position Measurement Error And Embedded Sensor Development, Karla S. Ladino

Theses and Dissertations--Biosystems and Agricultural Engineering

The overarching objective of this research was to enhance our comprehension of the three-dimensional precision of meteorological measurements obtained using small unmanned aircraft systems (UAS). Two complimentary experiments were conducted to achieve this objective.

The first experiment entailed the development and implementation of a system to determine the global navigation satellite system (GNSS) position accuracy on a UAS platform. This system was utilized to assess the static and dynamic accuracy of L1 and L1/L2 GNSS receivers in real-time kinematic (RTK) and non-RTK fix modes. Adjusted two-sample t-tests revealed significant differences in horizontal and vertical error between RTK and non-RTK receivers …

Livestock Wastewater And Air Quality Management Using Microalgae, Capacitive Deionization, And Biofilters, Augustina Kwesie Osabutey

Electronic Theses and Dissertations

Wastewaters play a significant role in the negative impact of phosphorus on the environment, such as eutrophication. However, phosphorus is a limiting nutrient essential for life which has gained global attention on productive technologies for phosphorus recovery. Several technologies have been developed for phosphorus removal and recovery from wastewater to help alleviate phosphorus loss to the environment. Capacitive deionization technology, which was earlier developed for water desalination and ion removal, is actively being explored for its ability to remove phosphorus from wastewater. This review describes capacitive deionization technology (CDI) and its various types. Significant attention is given to the use …

Effectiveness Of Atmospheric Cold Plasma In Inactivating Microorganisms, Nadee Shanika Kaluwahandi

Electronic Theses and Dissertations

In the food processing industry, Cold Plasma (CP) is an emerging green process with a number of potential applications. Cold plasma has mostly been used to reduce microbial counts in foodstuffs and biological materials as well as in different levels of packaging, particularly in cases where there is thermal sensitivity. Recent studies have demonstrated that CP technology is being developed for use in the food and agriculture industries. The primary focus is on the interactions between reactive species and food-borne microbes to inactivate them. The literature review discusses both proven and potential applications for cold plasma in food processing, as …

Life Cycle Assessment Of Air Classification As A Sulfur Mitigation Technology In Pine Residue Feedstocks, Ashlee Edmonson

Theses and Dissertations--Biosystems and Agricultural Engineering

Sulfur accumulation during biofuel production is pollutive, toxic to conversion catalysts, and causes the premature breakdown of processing equipment. Air classification is an effective preprocessing technology for ash and sulfur removal from biomass feedstocks. A life cycle assessment (LCA) sought to understand the environmental impacts of implementing air classification as a sulfur-mitigation technique for pine residues. Energy demand and material balance for preprocessing were simulated using SimaPro and the Argonne National Laboratory’s GREET model, specifically focusing on comparing the global warming potential (GWP) of grid electricity versus bioelectricity scenarios. Overall, the grid electricity scenario had a GWP impact over 7 …

Food Waste Storage Gaseous Emissions Detection And Quantification Using Infrared Spectroscopy, Ryley A. Burton-Tauzer

Cal Poly Humboldt theses and projects

A growing interest in sustainable waste management and the implementation of new policies have prompted a shift towards alternative resource recovery methods for organic waste, including food waste. To effectively assess alternative food waste treatment scenarios, it is important to evaluate the life cycle impacts associated with each scenario. The storage phase of food waste, encompassing its accumulation in kitchens, and storage in bins for collection and transportation, has been overlooked as a source of greenhouse gases in previous studies. This investigation aimed to identify the greenhouse gases emitted during the initial five-day period of low-oxygen storage. An open dynamic …