Bioresource and Agricultural Engineering Commons^™

Plasma-Generated Ozone For Odor Removal, Jordan Marot

Seton Hall University Dissertations and Theses (ETDs)

Ozone (O₃) is gaining popularity for its use in industrial and environmental applications, including water treatment, air purification, disinfection, and odor remediation. As a powerful oxidizing agent, ozone is highly effective in destroying harmful bacteria and degrading hazardous gas pollutants such as hydrogen sulfide (H₂S). Dielectric barrier discharge (DBD) reactors are widely used for commercial ozone production under atmospheric-pressure conditions. However, ozone yield and selectivity are strongly influenced by operating parameters, particularly gas flow rate, which affects residence time, energy transfer, and competing byproduct chemistry.

This study explores the influence of the air flow rate on …

Cross-Facility Reliable Deep Learning Based Beef Marbling Assessment Via Unsupervised Domain Adaptation Regression, Samuel Vinson

Biological and Agricultural Engineering Undergraduate Honors Theses

Inconsistent quality grading in beef production leads to inefficiencies, economic disparity, and consumer mistrust. While USDA meat grading traditionally relies on skilled visual inspectors, these human evaluations suffer from cross-facility variability and subjectivity. This paper introduces the first known application of unsupervised domain adaptation regression for cross-facility beef marbling score prediction—an innovation that improves generalization across diverse environments in the beef supply chain. Utilizing numerical scores ranging from 100-900, the research employed convolutional neural networks (CNNs), including ResNet, VGG, and AlexNet architectures. The study specifically introduced and validated a unified unsupervised domain adaptation regression method using the ResNet-50 architecture to …

Developing Transparent Sustainability Data Systems In A Poultry And Pet Food Company: An Internship Case Study, Catherine L. Warren

Biological and Agricultural Engineering Undergraduate Honors Theses

My honors thesis examined my internship experiences and its implications on sustainability data gathering and reporting in poultry and pet food companies. It highlighted my internship projects, the skills I developed, and the connections to sustainability data transparency and reliability in a corporate environment.

In my thesis, I shared details about my internship. I described what projects I worked on, the places I visited, the hands-on experience I gained, and the different teams I worked with throughout the internship duration. I discussed the analytic and professional skills I developed through conducting a waste audit, developing Tableau dashboards, and helping to …

Per- And Polyfluoroalkyl Substances (Pfas) In Cave And Withrow Springs, Arkansas, Luke A. Ahlemeier

Biological and Agricultural Engineering Undergraduate Honors Theses

The class of chemicals known as Per- and Polyfluoroalkyl Substances (PFAS) are believed to be widespread in the natural environment, but the full extent of PFAS prevalence is not well understood, particularly in karst springs. The objectives of this study were to (1) collect water samples from Cave Springs and Withrow Springs, Northwest Arkansas, (2) measure for concentrations of 40 PFAS compounds using EPA Method 1633, and (3) compare differences in PFAS concentrations and discuss potential sources of PFAS for each spring. Each spring was sampled on September 29, 2025, October 13, 2025, and November 10, 2025, and water samples …

Dried Water Treatment Residuals Might Be An Option To Reduce Soluble Reactive Phosphorus Release From Soils, Katie B. Mckay

Biological and Agricultural Engineering Undergraduate Honors Theses

Nonpoint source pollution from agricultural landscapes contributes to freshwater eutrophication, with legacy phosphorus (P) in soils potentially driving soluble reactive phosphorus (SRP) losses to surface waters. The objectives of this study were to evaluate SRP adsorption by dried water treatment residuals (WTRs) produced by Beaver Water District, quantify reductions in soil SRP release across increasing WTR application rates, and compare dried WTR performance to prior WTR studies.

Dried WTRs (~98% solids) were assessed using batch sorption experiments and soil core incubations. Phosphorus sorption was measured by mixing WTRs with CaCl₂ solutions containing increasing SRP concentrations and fitting results to …

Enhancing Food Security In Stann Creek, Belize Using Meat Rabbits: Engineering Perspective, Lindsey Garretson

Biological and Agricultural Engineering Undergraduate Honors Theses

The purpose of this paper is to discuss the engineering perspective within the overall project of using meat rabbits to enhance food security and nutrition within Stann Creek, Belize. From the engineering perspective, the overarching goals were like the overarching project goals including the construction and materials required guide within the manual, designing potential upgrades to the design including a solar and battery system and an automatic watering system, and to design the system to be “practically sustainable” where possible. The constraints for this project included cost, the size of land dedicated for the rabbitry, and the operational and environmental …

A Systems Approach To Nitrogen Fertilizer Management: Modeling Emissions And Runoff Pathways In Arkansas Agriculture, Avonelle Lindon

Biological and Agricultural Engineering Undergraduate Honors Theses

Nitrogen fertilizer management is a critical challenge in modern agriculture. This thesis develops a system dynamics model of nitrogen in Arkansas rice and corn systems to explore barriers to translating agricultural research into practical farmer guidance.  The modeling process revealed key challenges: (1) scarcity of Arkansas-specific factors and best management practice (BMP) effectiveness data; (2) tension between model comprehensiveness and accessibility; (3) misalignments in conservation incentive structures; and (4) difficulty in validating models without field measurements. The resulting model demonstrates basic nitrogen cycle processes and BMP integration, but validation against published literature revealed significant issues with predictive accuracy. These findings …

Uav-Based Sensor Integration For In-Situ Lake Water Quality Monitoring, Alec R. Campbell

Biological and Agricultural Engineering Undergraduate Honors Theses

Surface water monitoring is often constrained by limited spatial and temporal coverage due to the labor-intensive nature of traditional sampling methods, particularly in environments that are difficult to access or pose safety risks. Unmanned aerial vehicles (UAVs) offer a promising solution by enabling more frequent, spatially distributed, and cost-effective data collection. This study presented the design, development, and field evaluation of a UAV-based system for real-time, in-situ water quality monitoring. The system integrated multiple sensors, including oxidation-reduction potential (ORP), RGB spectrometry, pH, electrical conductivity (EC), dissolved oxygen (DO), and a multispectral spectrometer within a UAV platform.

Field testing was conducted …

Design And Performance Overview Of The Inaugural University Of Arkansas Beng Fountain Wars Team, Autumn Jones

Biological and Agricultural Engineering Undergraduate Honors Theses

This honors thesis describes the engineering design process for the first ASABE Fountain Wars submission by a student team at the University of Arkansas in over a decade. Fountain Wars has a technical and aesthetic task, and the focus of this thesis is the design of the technical task. In 2025, this task was the “shoot out.” The objective was to get objects from a small pool into two 5-gallon buckets 10-15 feet away. The power for initiating the launch had to be provided by the pump. The objects were required to start at the surface of the water.

The …

Anaerobic Digestion Of Variable, Heterogeneous Organic Wastes Under Changing Operational Conditions And Bioaugmentation: Impacts On Process Performance And Microbiome Dynamics, Victoria Holliday

Theses and Dissertations--Biosystems and Agricultural Engineering

Expanding the adoption of anaerobic digestion (AD) is limited by system instabilities caused by feedstock composition and variability. Understanding how changes in feedstock and operational parameters influence microbiome dynamics is essential for developing biology-driven strategies to improve digester stability.

Two semi-continuous reactors, an experimental and a control, operated over 39 weeks across five phases with varying feedstocks and organic loading rates. Substrate-specific enrichment cultures were developed for bioaugmentation and implemented in select phases to assess its impact. Both reactors exhibited similar performance, transitioning through periods of stability, stress, and recovery in response to operational changes. Corresponding shifts in dominant taxa …

From Floodplain To Floodplain: Analyzing Stream And Riparian Restoration Methodologies And Impacts, Noah P. Lane

Theses and Dissertations--Biosystems and Agricultural Engineering

Stream restoration is a relatively new scientific field. Currently, there is not a definitive methodology for performing restorations that all professionals in industry and academia can agree upon. This has allowed for multiple ideologies to be developed and altered that vary by geographic location and the professional using them. In addition to the methodologies used, the publicly available design guidance published by state government organizations also varies by regulatory authority, method of analysis, ecoregion, and restoration objectives. In some cases, design guidance is replicated from a different geographical area and may not satisfy local needs or existing site conditions. Since …

Mechanical Fractionation Of Wheat Middlings For Application In Pyrolysis And Animal Feed, Okwudili I. Obiakor

Dissertations, Master's Theses and Master's Reports

Wheat middlings are grain byproducts that are underused for bioenergy production despite having a high lignocellulose content. Its use as a feedstock for catalytic pyrolysis depends on effective and sustainable fractionation to enhance efficiency and product yield. This study tested mechanical pre-fractionation (sieving and air classification) to reduce ash content of certain fractions to < 1% for catalytic pyrolysis and enrich nutrient levels of other fractions for feed applications. Wheat middlings were separated into 11 fractions using screen sizes from 106 µm to 1651 µm, and the composition of each fraction was characterized (ash, protein, structural carbohydrates, lignin, starch, and simple sugars). For cyclone separation, a full factorial design was used to study the effect of air velocity (15,18, 20 m/s) and feed rate (33, 35, 38 kg/h) on the amount of material collected in the underflow and overflow, and the composition of these fractions was characterized. Sieving showed a pronounced segregation of ash content, from 4.5% to 6.5% in wheat middlings fractions, with 5.7% being the lowest for coarse fractions which has higher lignocellulose content, and 4.5% in the fine fraction (150-212 µm). The same defined enrichment was observed in all nutrients except for protein. Starch enrichment zone were defined in the fine fractions (212 µm and below), for structural carbohydrates and lignin in the coarse fractions (600 µm and above), and for ash in coarse fractions (1180-1651 µm). In contrast, protein content was not significantly different between various fractions (p value=0.787). The fiber rich fraction (> 600 µm), suitable for pyrolysis, which have a composite ash value of 6.0% can be sorted and mixed with intermediate fractions to reduce ash to 5.3% and the remaining fractions rich in digestible nutrients used for animal feed formulation. Compared to sieving, cyclone separations did not …

An Integrated Pull System Framework For Disassembly Industries: Bridging The Supply-Demand Mismatch In Duck Meat Processing, Hongchao Yu

Graduate Research Theses & Dissertations

Disassembly-based production systems, such as duck meat processing, face inherent operational challenges due to one-to-many production structures, short product shelf life, and volatile customer demand. A single carcass must be processed into multiple products at largely fixed biological ratios, while demand varies across products and over time. This supply-demand mismatch frequently leads to simultaneous surplus and shortage, resulting in unstable shipment schedules, excess inventory, and unavoidable waste. Traditional order-driven pull systems typically respond to orders independently and are limited in their ability to coordinate these interrelated effects.

This dissertation develops an integrated pull system framework for perishable disassembly processes, using …

Feasibility Of Corn Stover For Biogas Production In Northwestern Illinois: A Case Study Of Jo Daviess And Carroll Counties, Anthony Amotoe-Bondzie

Masters Theses

The growing demand for renewable energy and sustainable waste management has intensified interest in agricultural residues such as bioenergy feedstocks. This study evaluated the feasibility of converting corn stover into biogas through anaerobic digestion (AD) in Jo Daviess and Carroll Counties, Illinois, with consideration of the Savanna Industrial Park as a potential centralized processing hub. Although corn stover represents one of the largest biomass resources in the United States, this research identifies a critical gap between theoretical availability and practically recoverable feedstock. Using a mixed-methods framework, the study integrates biomass quantification, methane yield modeling, economic analysis, and policy assessment. Results …

Cultivation Of Botryococcus Braunii For The Production Of Hydrocarbons Suitable For Fuel Use, Bryan C. Carroll

All Theses

Energy security, rural poverty, and climate change are pressing issues of our time. Biofuels provide a solution to these issues, with a focus on sustainable aviation fuel, SAF, due to compatibility with aircraft infrastructure and energy density. This research aims to review and produce knowledge about a specific microalga, Botryococcus braunii, for its potential for SAF. First a literature review on the process was conducted followed by an experimental study on the impact of aqueous media and inorganic carbon its growth and hydrocarbon content. The literature review found the process consists of cultivation followed by lipid extraction or hydrothermal …

Biological Hydrogen Process Improvements By High Temperature Simultaneous Saccharification And Fermentation, Frank W. Jeffries V

All Theses

The hyperthermophilic bacterium Thermotoga neapolitana is established as a versatile organism for fermentative hydrogen (H₂) production. Batch experiments were carried out to investigate the cell yield, product yield, and kinetic parameter values for individual media containing five carbohydrates. The highest H₂ yield of 15.56±0.31 mmol-H₂/g-carbohydrate was reported for glucose medium. H₂ yield was measured to be 14.51±0.38, 14.44±1.15, 11.88±0.84, and 11.53±0.73 mmol/g for media containing xylose, cellobiose, arabinose and xylan respectively. Acetic acid yield followed a similar trend, where the obtained values were 0.470±0.01, 0.462±0.04, 0.431±0.01, 0.409±0.03, and 0.406±0.01 g-acid/g-carbohydrate for glucose, cellobiose, xylose, …

Evaluating Nanobubble-Enriched Water Treatments For Cleaning Stainless Steel Winery Tanks At The Gallo Winery Research Station In Livingston, California, Edgar Godoy-Garcia

Master's Theses

ABSTRACT

Evaluating nanobubble-enriched water treatments for cleaning stainless steel winery tanks at the Gallo winery research station in Livingston, California.

Edgar A. Godoy-Garcia

Sanitation of stainless steel wine storage tanks is a critical component of quality control in commercial winemaking operations. Ineffective cleaning can lead to microbial contamination, product spoilage, and safety concerns. Traditionally, wineries rely on manual scrubbing, chemical cleaning agents, and extensive water rinsing cycles to maintain sanitary tank conditions. However, these methods are resource-intensive and may pose risks to both workers and the environment due to chemical exposure and wastewater generation. In response to growing industry interest …

Connecting Biological Engineering Education With Hands-On Internship Experience, Lindsey Bush

Biological and Agricultural Engineering Undergraduate Honors Theses

My honors thesis examines how my time in the biological engineering program and internship experience have prepared me for my future career. It highlights the skills I developed, the lessons I learned, and how these experiences shaped my job search and career decisions.

In my thesis, I share details about my internship. I described what I worked on, the places I visited, and the hands-on experience I gained. I talk about how my coursework provided a strong foundation and how my internship allowed me to apply those concepts in real-world engineering settings. I also discuss the technical and professional skills …

Engineering Planktonic And Biofilm Microalgae Systems For Productivity, Power Requirements, Cost, And Scalability, Dallin Chugg

All Graduate Reports and Creative Projects, Fall 2023 to Present

Microalgae cultivation offers dual benefits as an effective wastewater treatment method and a sustainable source of valuable bioproducts, such as biofuels, bioplastics, and feedstocks. This approach supports sustainability by transforming waste into high-value products while minimizing environmental impact. However, scaling microalgae cultivation to industrial levels presents significant challenges, particularly in optimizing harvesting efficiency, reducing mixing and transport costs, and managing large water requirements.

This report compares the productivity, scalability, cost, and energy requirements of two primary cultivation systems: planktonic and biofilm. Planktonic systems, such as open raceway ponds (ORPs), excel in light distribution and nutrient uptake due to continuous mixing, …

Sustainable Agriculture Through Data-Driven Land And Soil Management For Rural Farming Communities, Peggy Clareece Discenza

Open Access Theses & Dissertations

This thesis aims to investigate sustainable farming practices by utilizing a database containing soil, weather, and water data. Additionally, it evaluates cropping strategies using a system that incorporates nutrient dynamics and environmental values. The objective is to monitor, develop predictive models, and assess the impact of both controlled and uncontrolled nutrient variables. This is achieved through the development of an algorithm that provides information on soil health based on datasets and land use, with a particular focus on residual values after harvesting for deeper analytical insights and interpretation. This study focuses on key nutrients, including pH levels, water availability, and …

Kinetic Growth Rate Analysis Of Coelastrella Sp. In Aquaculture Wastewater., Rob Skarvan

Master of Engineering Theses

The demand for sustainable food and energy production continues to rapidly rise. Utilizing aquaculture wastewater as microalgae growth medium is a potential opportunity for nutrient recycling and industrial symbiosis, but more research is required to understand how best to design and scale-up a dual-purpose facility. This study investigates the growth of Coelastrella sp. in aquaculture wastewater compared to industry-standard growth medium BG-11 and modified tap water as controls. Though cell size and pigment density varied throughout media, aquaculture wastewater performed very comparably to BG-11 as a microalgae culture broth.

The Monod equation can model Coelastrella sp. growth based …

Berm-Leveling Machine For Peach Orchards: Incorporation Of Tree-Sensing Feature And Profitability Study, Shubham Singh

All Theses

Root collar excavation extends the productive life of peach trees in Armillaria root rot-infested soil, but the process requires trees to be planted on berms. Berm-planted peach orchards restrict the mobility of workers and machinery and can lead to increased erosion in furrows on either side of the berms. The current inter-tree berm-leveling machine depends on the driver's command to dodge the peach trees. The objectives of this thesis were to (1) integrate the feeler, infrared, and LiDAR-based tree sensing systems in the berm-leveling machine to make the soil excavating head's movement independent, (2) measure the impact of finger weeder-based …

Critical Analysis Of Coursework And Internship Experience In Relation To Biological Engineering At The University Of Arkansas, Samantha Wheat

Biological and Agricultural Engineering Undergraduate Honors Theses

My internship allowed me to gain important experience about a possible future career path with a biological engineering degree. Not only did this experience apply knowledge learned in the classroom from classes taken, I was also able to use my critical thinking skills gained from biological engineering coursework and teaching style to learn new skills and efficiently complete tasks given to me. This internship allowed me to try out a possible career path that interested me, and through my internship experience I was able to learn more about what kind of career path I was interested in after graduation. Additionally, …

Effects Of Sensor Separation On Flux Calculations In The Eddy Covariance Method., Maria D. Vergara Murillo

Biological and Agricultural Engineering Undergraduate Honors Theses

Rice production contributes approximately 8% of global anthropogenic methane emissions. Methane (CH₄) is a powerful greenhouse gas with a global warming potential 28 times greater than carbon dioxide (CO₂) which makes it important to monitor for understanding and mitigating its contribution to climate change. The Eddy Covariance (EC) method is used to monitor greenhouse gas emissions such as CO₂, CH₄, etc. As part of the EC method, the instruments on the EC towers are used to record the gas concentrations in the atmosphere; these concentrations are then run in the EddyPro software …

Treating Ground Water For Agricultural And Individual Consumption, Gabby Miller, Bronson Scott, Michael Clawson

Biomedical Engineering

This project, conducted in collaboration with Cal Poly seniors and Da Vinci High School students, aims to develop a solar-powered groundwater purification system. This system is designed to provide clean water for agricultural use and individual consumption, addressing the growing concerns of groundwater contamination and accessibility needs. The final prototype integrates a gravity filtration system combined with chemical purification, utilizing aluminum sulfate and chlorine to remove particulates, bacteria, and organic compounds.

The research phase involved an extensive review of groundwater contamination issues, existing filtration technologies, and market analysis. Key design constraints included cost-effectiveness, ease of maintenance, and minimal energy consumption, …

Enhancing The Mechanical Properties Of Sla 3d-Printed Bio-Resin From Linseed Oil Using Cellulose And Lignin Biopolymers, Chukwunonso A. Ikedionu

College of Graduate Studies: Theses & Dissertations

Abstract

This research explores the development of bio resin from linseed oil by the process of epoxidation and acrylation to produce acrylated epoxidized linseed oil (AELO). Lignin and cellulose biopolymers were added as reinforcement at varying weight fractions of 1 wt.%, 2.5 wt.%, and 5 wt.%, and their mechanical performance was compared against pure AELO. The formulations were printed using an Elegoo SLA 3D printer to create standardized test specimens like tensile bars, compression cylinders, and hardness blocks, which were all prepared according to the ASTM testing standard.

The results indicate that reinforcement effects depend on both filler type and …

Lorawan-Enabled Iot Solution For Smart Farming, Talha Khan

Electronic Theses and Dissertations

The rising global demand for food, driven by population growth, alongside a declining rural workforce, presents a great challenge for agriculture. Precision agriculture, which relies on the widespread adoption of smart farming technologies, is anticipated to enhance agricultural productivity and sustainability. Emerging technologies, such as machine vision, artificial intelligence (AI), and the Internet of Things (IoT), offer innovative and promising solutions to address these challenges. This study focuses on LoRaWAN, a prevalent Low-Power Wide-Area-Network (LPWAN) IoT technology, examining its application in crop and livestock farming as well as its associated cybersecurity challenges. LoRaWAN IoT systems were constructed for three application …

Nanopesticide Fate And Transport In Agroecosystems: A Field Study, John C. Stickney

Theses and Dissertations--Biosystems and Agricultural Engineering

Nanopesticides are an emerging class of pesticides associated with engineered nanoparticles that provide agricultural and environmental benefits. However, nanopesticide fate, transport, and persistence remain poorly understood. As do their potential impacts on the health of agroecosystems and influence on nutrient release. Therefore, this project investigated the fate, transport, and persistence of two widely available nanopesticides, an insecticide, nano-imidacloprid, and a fungicide, nano-copper hydroxide. The fate and transport in runoff water and soils of these nanopesticides, as well as their impacts on nutrients retention, were assessed through a field plot study over 2 growing seasons. Runoff from rainfall events and soil …

Safety Monitoring & Intelligent Power Distribution Systems For Compact Agricultural Equipment, Mason O. Bradley

Theses and Dissertations--Biosystems and Agricultural Engineering

The agricultural industry continues to be one of the most dangerous career fields in the United States of America with compact agricultural equipment being a common source for casualties in the industry. The primary focus of this work is to develop new technology that improves operational safety of compact agricultural equipment through the use of low-cost embedded electronics. This work presents the design of three systems in alignment with this goal.

The first system aims to integrate electrical intelligence and passive safety monitoring into the power distribution system of a small piece of agricultural equipment. The system known as the …

Impacts Of Utilizing Reverse Osmosis Concentrate On Mashing, Fermentation, And Water Use In Bourbon Whiskey Production, Ryan C. Sarhan

Theses and Dissertations--Biosystems and Agricultural Engineering

This thesis addresses the feasibility of reusing reverse osmosis concentrate (ROC) in the bourbon whiskey fermentation processes. Initial work compared laboratory-scale mashing and fermentation methods, demonstrating that simultaneous saccharification and fermentation reliably reflects industrial-scale processes, with lower complexity and process time. Building upon this, laboratory and distillery-scale experiments demonstrated that reusing ROC in the mashing and fermentation steps does not negatively impact ethanol yields. ROC produced by systems with a water softener was found to significantly increase mash rheology, suggesting a need for potential process adjustments. Softened ROC also altered the production of flavor-influencing volatile congeners. Under worst case conditions, …