Bioresource and Agricultural Engineering Commons^™

Design Of Control Logic And The Human-Machine Interface For A Demonstration Plant Growth Chamber Implemented On A Programmable Logic Controller, Rachael Koehler

Biological and Agricultural Engineering Undergraduate Honors Theses

This honors thesis covers the planning, development, and implementation of system controls and human-machine interface (HMI) for a demonstration plant growth chamber. The work is a continuation of an ongoing project to be used as an educational and recruiting tool manifesting the skills acquired from the Biological and Agricultural Engineering Department at the University of Arkansas’ College of Engineering. This work includes emergency controls, overall design interface, and controls for both the aeration and lighting subsystems of the growth chamber. Overall design interface controls established included development of two user modes, Administrator and Visitor. The Administrator user will have full …

Light Intensity Control For Plc-Based Hydroponic Demonstration System, Christian Hitt

Biological and Agricultural Engineering Undergraduate Honors Theses

In order to demonstrate a skill set obtained through the University of Arkansas Biological Engineering, a group of students and I developed a hydroponic system where plants could be grown in a chamber. System parameters such as air quality, irrigation, and lighting were controlled by a Programmable Logic Computer (PLC) and an array of sensors and actuators. Each student focused on a certain aspect of this system, mine being the lighting. Developing this system involved researching the relationship between light intensity and plant growth, designing a system to suspend the lights above the growth chamber, and develop a system to …

Control System For Variable-Orifice Mechatronic Spray Nozzle For Regulation Of Application Rate And Droplet Size Spectra, Rodney Rohrer

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Traditional fixed-orifice spray nozzles are selected for flow rate and droplet spectra required for a given pesticide application. Although limited variation in flow can be achieved by adjusting system pressure, this can adversely affect spray quality. Other nozzle configurations, such as Pulse Width Modulated (PWM) nozzles or passive variable-orifice designs, are intended to maintain consistent droplet size and spray pattern as flow rate is changed but those too have limitations.

A variable-orifice nozzle modified by Luck (2012) can span multiple droplet spectra and offers independent control of flow and droplet size; however, an advanced control system must be developed to …

When It Rains, It Pours: A Case Study Of Spatio-Temporal Variations In High-Intensity Precipitation Events In Arkansas, Deanna Mantooth-Hendrix

Graduate Theses and Dissertations

Climate change is having an impact on weather systems and ecosystems worldwide. Glaciers are receding, oceans are acidifying, hurricanes are stronger, and extreme precipitation is increasing in frequency. Even with the wealth of data and knowledge about the threat of climate change, some places are slow to adapt because they think that the impact to their ecosystem will not be severe. The goal of this project was to determine if climate change is having an impact on extreme precipitation in the top urban areas of Arkansas. The major concern with an increase in extreme events in urban areas is flooding. …

Challenges And Opportunities In Precision Irrigation Decision-Support Systems For Center Pivots, Jingwen Zhang, Kaiyu Guan, Bin Peng, Chongya Jiang, Wang Zhou, Yi Yang, Ming Pan, Trenton Franz, Derek M. Heeren, Daran R. Rudnick, Olufemi P. Abimbola, Hyungsuk Kimm, Kelly Caylor, Stephen Good, Madhu Khanna, John Gates, Yaping Cai

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Irrigation is critical to sustain agricultural productivity in dry or semi-dry environments, and center pivots, due to their versatility and ruggedness, are the most widely used irrigation systems. To effectively use center pivot irrigation systems, producers require tools to support their decision-making on when and how much water to irrigate. However, currently producers make these decisions primarily based on experience and/or limited information of weather. Ineffective use of irrigation systems can lead to overuse of water resources, compromise crop productivity, and directly reduce producers’ economic return as well as bring negative impacts on environmental sustainability. In this paper, we surveyed …

Preclinical Development Of Single Walled Carbon Nanotube-Based Optical Biosensors, Eric M. Hofferber

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

High resolution, long-term monitoring of key biological analytes would improve patient outcomes by providing earlier detection of disease states and improved efficacy of treatment. One class of biosensors that have gained much attention in recent years are optical biosensors. Optical probes are attractive biosensors due to their noninvasive nature of detection, as certain light can pass through tissue, water, and blood. Single walled carbon nanotubes (SWNT) are a specific type of optical biosensor that fluoresce in the near infrared range of the electromagnetic spectrum and offer unparalleled spatial and temporal resolution. SWNT have been applied as biosensors in vitro, …

Detecting Recent Crop Phenology Dynamics In Corn And Soybean Cropping Systems Of Kentucky, Yanjun Yang, Bo Tao, Liang Liang, Yawen Huang, Christopher J. Matocha, Chad D. Lee, Michael Sama, Bassil El Masri, Wei Ren

Geography Faculty Publications

Accurate phenological information is essential for monitoring crop development, predicting crop yield, and enhancing resilience to cope with climate change. This study employed a curve-change-based dynamic threshold approach on NDVI (Normalized Differential Vegetation Index) time series to detect the planting and harvesting dates for corn and soybean in Kentucky, a typical climatic transition zone, from 2000 to 2018. We compared satellite-based estimates with ground observations and performed trend analyses of crop phenological stages over the study period to analyze their relationships with climate change and crop yields. Our results showed that corn and soybean planting dates were delayed by 0.01 …

Evaluating Evapotranspiration Values In Rwanda Using The Fao-56 Pm, Turc, And Hargreaves-Samani Equations, Elizabeth Uwase

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Evapotranspiration (ET) is an important component of the hydrologic cycle and involves exchange of water between the surrounding water bodies, soil, crop surfaces, and the atmosphere. Therefore, this research was aimed at determining ET and its trend across Rwanda using climatic data measured at five sites. Equations were used to calculate ET using extra-terrestrial radiations, solar radiations, evapotranspiration using the FAO-56 guidelines - Turc method (1961) and Hargreaves-Samani (HS) method (1983). The obtained data from the weather stations were analyzed using the two methods and graphs were plotted for visualization. The average monthly reference evapotranspiration for both equations ranges from …

Comparison Of Three Commercial Automatic Boom Height Systems For Agricultural Sprayers, Travis A. Burgers, John D. Gaard, Brian J. Hyronimus

Mechanical Engineering Faculty Publications

Automatic boom height systems reduce the variability of agricultural sprayer boom height. Consistent boom height is important for three key reasons: to reduce uneven spray dispersion if the boom is too low, to reduce spray droplet drift if the boom is too high, and to reduce damage to the boom or crop if the boom is too low. No data is available comparing commercial boom height systems. Three leading North American automatic boom height systems were compared: John Deere BoomTrac Pro (System A), Raven AutoBoom® XRT (System B), and Norac UC5TM Passive Roll (System C) on a John Deere R4045 …

Water News, Spring 2021, Department Of Agriculture And Biosystems Engineering

SDWRI Water News

Contents:
North Central Region tackle harmful algal blooms
Algae pull nutrients from swine facility manure, air
Study examines woodchip quality in bioreactors
Nonprofit joins battle to mitigate Lake Mitchell algal blooms

Field Evaluation Of Non-Contact Flow Measurement Device - Pid, Jack Evans, Stuart Styles

BioResource and Agricultural Engineering

The Irrigation Training and Research Center (ITRC) has analyzed the data from several non-contact volumetric flow meter models under various conditions. This testing was done with support from technical services contracts with the California Department of Water Resources (DWR) and the United States Bureau of Reclamation (USBR).

Field Evaluation Of Non-Contact Flow Measurement Devices - Gcid, Jack Evans, Stuart Styles

BioResource and Agricultural Engineering

The Irrigation Training and Research Center (ITRC) has analyzed the data from several non-contact volumetric flow meter models under various conditions. This testing was done with support from technical services contracts with the California Department of Water Resources (DWR) and the United States Bureau of Reclamation (USBR).

Utilizing Digital Image Processing And Two‑Source Energy Balance Model For The Estimation Of Evapotranspiration Of Dry Edible Beans In Western Nebraska, Wei‑Zhen Liang, Isabella Possignolo, Xin Qiao, Kendall Dejonge, Suat Irkmak, Derek M. Heeren, Daran Rudnick

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Having an accurate yet simple method to estimate crop evapotranspiration ( ET_C) is a vital component of reliable irrigation scheduling. In this study, two versions of the two-source energy balance (TSEB) model: the TSEB model with the Priestley–Taylor equation (TSEB-PT) and the Penman–Monteith equation (TSEB-PM), were used to estimate ET_C of dry edible beans in western Nebraska. Compared with previous studies, this study is unique in that a Visual Basic software—Crop Canopy Image Analyzer (CCIA) was developed to process digitally captured RGB canopy images to obtain necessary canopy cover (CC) parameters for the TSEB models such as …

Unconventional Agriculture: An Exploration Of Hydroponics And Aquaponics And Their Role As A Solution To Food Scarcity, Kai Meacham

Honors Program: Senior Projects (Public)

Unconventional agriculture includes methods of farming that are defined by unique farming practices and a focus on sustainability. Unconventional agriculture can take many forms, including hydroponic systems and aquaponic systems. These two systems are unique in the sense that they are soilless methods of growing plants. Both of these systems require careful monitoring because they do not have soil to act as a buffer and help maintain normal levels. Though these two systems are very similar they have some key differences in how they function, which ultimately leads to differing advantages and disadvantages of both systems. Additionally, these systems have …

Field Evaluation Of Non-Contact Flow Measurement Device - Bcid, Jack Evans, Stuart Styles

BioResource and Agricultural Engineering

The Irrigation Training and Research Center (ITRC) is currently testing several non-contact volumetric flow meter models under their technical services contracts with the California Department of Water Resources (DWR) and the United States Bureau of Reclamation (USBR). In April 2020, a Sommer RQ-30A non-contact flow meter was installed at Banta Carbona Irrigation Districts (BCID) Main Canal approximately 180 ft downstream of the discharge from Pumping Plant 1. The meter was mounted at midspan along a footbridge that crosses the throat of an ITRC designed subcritical contraction structure (see Figure 1). An existing SonTek Acoustic Doppler Flow Meter (ADFM) was installed …

Comparative Study Of Human Pluripotent Stem Cell-Derived Endothelial Cells In Hydrogel-Based Culture Systems, Zhanqi Wang, Fuxing Zuo, Qing Liu, Xuesheng Wu, Qian Du, Yuguo Lei, Zhangmin Wu, Haishuang Lin

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Human pluripotent stem cell (hPSC)-derived endothelial cells (ECs) are promising cell sources for drug discovery, tissue engineering, and studying or treating vascular diseases. However, hPSC-ECs derived from different culture methods display different phenotypes. Herein, we made a detailed comparative study of hPSC-ECs from three different culture systems (e.g., 2D, 3D PNIPAAm-PEG hydrogel, and 3D alginate hydrogel cultures) based on our previous reports. We expanded hPSCs and differentiated them into ECs in three culture systems. Both 3D hydrogel systems could mimic an in vivo physiologically relevant microenvironment to protect cells from shear force and prevent cell agglomeration, leading to a high …

Development Of An Internet Of Things (Iot) Enabled Novel Wireless Multi Sensor Network For Infield Crop Monitoring, Nipuna Chamara

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Multispectral imaging systems on satellite, aerial, and ground platforms are used commonly to monitor in-field crops in precision agriculture by farmers and researchers. Limited spatial and temporal resolution and weather dependence of the data collection are two main disadvantages of these methods. In-field sensor networks can continuously monitor environmental and plant physiological parameters by leveraging low-power computation and long-range communication technologies. We built and tested a novel sensor network equipped with soil moisture, multispectral and RGB imaging sensors in an experimental soybean field at Eastern Nebraska Research and Extension Center, NE, USA. 10 down-looking and 1 up-looking sensor node were …

Biodegradable Cellulose Film Prepared From Banana Pseudo-Stem Using An Ionic Liquid For Mango Preservation, Binling Ai, Lili Zheng, Wenqi Li, Xiaoyan Zheng, Yang Yang, Dao Xiao, Jian Shi, Zhanwu Sheng

Biosystems and Agricultural Engineering Faculty Publications

The excessive use and disposal of plastic packaging materials have drawn increasing concerns from the society because of the detrimental effect on environment and ecosystems. As the most widely used fruit packing material, polyethylene (PE) film is not suitable for long-term preservation of some tropical fruits, such as mangos, due to its inferior gas permeability. Cellulose based film can be made from renewable resources and is biodegradable and environmental-friendly, which makes it a promising alternative to PE as a packaging material. In this study, cellulose film synthesized from delignified banana stem fibers via an ionic liquid 1-Allyl-3-methylimidazolium chloride ([AMIm][Cl]) were …

Determination Of Vadose Zone And Saturated Zone Nitrate Lag Times Using Long-Term Groundwater Monitoring Data And Statistical Machine Learning, Martin J. Wells, Troy E. Gilmore, Natalie Nelson, John K. Bohlke

Department of Agricultural and Biological Systems Engineering: Faculty Publications

In this study, we explored the use of statistical machine learning and long-term groundwater nitrate monitoring data to estimate vadose zone and saturated zone lag times in an irrigated alluvial agricultural setting. Unlike most previous statistical machine learning studies that sought to predict groundwater nitrate concentrations within aquifers, the focus of this study was to leverage available groundwater nitrate concentrations and other environmental variables to determine mean regional vertical velocities (transport rates) of water and solutes in the vadose zone and saturated zone (3.50 and 3.75 m yr−1 , respectively). The statistical machine learning results are consistent with two primary …

Role Of Nadþ In Regulating Cellular And Metabolic Signaling Pathways, Sara Amjad, Sabah Nisar, Ajaz A. Bhat, Ab Rauf Shah, Michael P. Frenneaux, Khalid Fakhro, Mohammad Haris, Ravinder Reddy, Zoltan Patay, Joseph Baur, Puneet Bagga

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Background: Nicotinamide adenine dinucleotide (NAD⁺), a critical coenzyme present in every living cell, is involved in a myriad of metabolic processes associated with cellular bioenergetics. For this reason, NAD⁺ is often studied in the context of aging, cancer, and neurodegenerative and metabolic disorders.

Scope of review: Cellular NAD⁺ depletion is associated with compromised adaptive cellular stress responses, impaired neuronal plasticity, impaired DNA repair, and cellular senescence. Increasing evidence has shown the efficacy of boosting NAD⁺ levels using NAD⁺ precursors in various diseases. This review provides a comprehensive understanding into the role of NAD^{+ …}

Historical Contingency In Microbial Resilience To Hydrologic Perturbations, Hyun-Seob Song, James C. Stegen, Emily B. Graham, Timothy D. Scheibe

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Development of reliable biogeochemical models requires a mechanistic consideration of microbial interactions with hydrology. Microbial response to and its recovery after hydrologic perturbations (i.e., resilience) is a critical component to understand in this regard, but generally difficult to predict because the impacts of future events can be dependent on the history of perturbations (i.e., historical contingency). Fundamental issues underlying this phenomenon include how microbial resilience to hydrologic perturbations is influenced by historical contingency and how their relationships vary depending on the characteristics of microbial functions. To answer these questions, we considered a simple microbial community composed of two species that …

Effects Of Racing Surface And Turn Radius On Fatal Limb Fractures In Thoroughbred Racehorses, Michael L. Peterson, Wayne T. Sanderson, Nurlan Kussainov, Sarah Jane Hobbs, Patti Miles, Mary C. Scollay, Hilary M. Clayton

Biosystems and Agricultural Engineering Faculty Publications

North American Thoroughbred racing is conducted on three types of surfaces—dirt, turf, and synthetic. The tracks are oval, and races are run counterclockwise. The loading on right and left limbs is expected to differ as a function of turn radius, banking, surface, and gait asymmetry. Hind limbs and forelimbs also have different functions related to propulsion and turning, respectively. This study uses the Equine Injury Database for race starts from 1 January 2009 through 31 December 2014, to compare injury rates across participating North American racetracks. The data are limited to catastrophic injuries in which horses died or were euthanized …

Common Unit Conversions For Irrigation, Dean E. Eisenhauer, Derrel L. Martin, Derek M. Heeren, Glenn J. Hoffman

Open Learning Resources, General/Selected

A fact sheet that includes common unit conversions for irrigation in international system of units (SI) and United States customary system of units (USCS).

Includes units for: length, area, volume, flow, weight and mass, pressure, crop yield, temperature, and the United States public land survey system.

Valorization Of Xylan In Agroforestry Waste Streams, Harrison Appiah

Graduate Theses, Dissertations, and Problem Reports (ETD)

Valorization of Xylan in Agroforestry Waste Streams.

Harrison Appiah

Microwave-assisted deep eutectic solvent and gamma-valerolactone metallic chloride catalyzed conversion of xylan to furfural were investigated using a 2x3 factorial experimental design at two levels of percent microwave power, reaction time, and catalyst concentration. The levels of each factor studied were (20%, 60% microwave power, 2, 4 minutes, and 10, 20mg) respectively. The effect of three metallic chloride catalysts (LiCl, FeCl3.6H20, CuCl2) on the conversion of xylan to furfural was also investigated. The gamma-valerolactone-ferric chloride sent system exhibited the highest mean yield of furfural (56.50%). The next highest furfural yield of …

Quantification Of Nitric Oxide Concentration Using Single-Walled Carbon Nanotube Sensors, Jakob Meier, Joseph Stapleton, Eric M. Hofferber, Abigail Haworth, Stephen D. Kachman, Nicole M. Iverson

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Nitric oxide (NO), a free radical present in biological systems, can have many detrimental effects on the body, from inflammation to cancer. Due to NO’s short half-life, detection and quan- tification is difficult. The inability to quantify NO has hindered researchers’ understanding of its impact in healthy and diseased conditions. Single-walled carbon nanotubes (SWNTs), when wrapped in a specific single-stranded DNA chain, becomes selective to NO, creating a fluorescence sensor. Unfortunately, the correlation between NO concentration and the SWNT’s fluorescence intensity has been difficult to determine due to an inability to immobilize the sensor without altering its properties. Through the …

Modeling And Prioritizing Interventions Using Pollution Hotspots For Reducing Nutrients, Atrazine And E. Coli Concentrations In A Watershed, Olufemi P. Abimbola, Aaron R. Mittelstet, Tiffany Messer, Elaine Berry, Anna Van Griensven

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Excess nutrients and herbicides remain two major causes of waterbody impairment globally. In an attempt to better understand pollutant sources in the Big Sandy Creek Watershed (BSCW) and the prospects for successful remediation, a program was initiated to assist agricultural producers with the implementation of best management practices (BMPs). The objectives were to (1) simulate BMPs within hotspots to determine reductions in pollutant loads and (2) to determine if water-quality standards are met at the watershed outlet. Regression-based load estimator (LOADEST) was used for determining sediment, nutrient and atrazine loads, while artificial neural networks (ANN) were used for determining E. …

Antibiotic Resistance Genes In Swine Manure Slurry As Affected By Pit Additives And Facility Disinfectants, Maria C. Hall, Jon Duerschner, John E. Gilley, Amy Schmidt, Shannon Bartelt-Hunt, Daniel D. Snow, Kent M. Eskridge, Xu Li

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Manure storage facilities are critical control points to reduce antibiotic resistance genes (ARGs) in swine manure slurry before the slurry is land applied. However, little is known about how exogenous chemicals entering the manure storage facilities may affect the fate of ARGs. The objective of this study was to analyze the impact of six commonly used pit additives and four facility disinfectants on the concentration of ARGs in swine manure slurry. Bench scale reactors, each containing approximately 50 L of liquid swine manure, were dosed with additives or disinfectants and were sampled for 40 days. Seven antibiotic resistance genes along …

Differential Survival Of Non-O157 Shiga Toxigenic Escherichia Coli In Simulated Cattle Feedlot Runoff, Lisa M. Durso, John E. Gilley, Daniel N. Miller

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Environmental survival time is important when evaluating adverse health outcomes from foodborne pathogens. Although outbreaks associated with manure-impacted irrigation or runoff water are relatively infrequent, their broad scope, regulatory importance, and severe health outcomes highlight the need to better understand the environmental survival of manure-borne pathogens. Shiga toxigenic Escherichia coli (STEC) are excreted in feces and persist in the environment until they die or recolonize a new host. Surface waters contaminated with manure-borne STEC can infect humans through drinking and recreational water use or irrigated crops that are minimally cooked. In this study, manure-impacted water microcosms mimicking beef cattle feedlot …

Editorial: Predictive Modeling Of Human Microbiota And Their Role In Health And Disease, Hyun-Seob Song, Stephen R. Lindemann, Dong-Yup Lee

Department of Agricultural and Biological Systems Engineering: Faculty Publications

No abstract provided.

The Nanotheranostic Researcher’S Guide For Use Of Animal Models Of Traumatic Brain Injury, Brandon Z. Mcdonald, Connor C. Gee, Forrest M. Kievit

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Traumatic brain injury (TBI) is currently the leading cause of injury-related morbidity and mortality worldwide, with an estimated global cost of USD 400 billion annually. Both clinical and preclinical behavioral outcomes associated with TBI are heterogeneous in nature and influenced by the mechanism and frequency of injury. Previous literature has investigated this relationship through the development of animal models and behavioral tasks. However, recent advancements in these methods may provide insight into the translation of therapeutics into a clinical setting. In this review, we characterize various animal models and behavioral tasks to provide guidelines for evaluating the therapeutic efficacy of …