Bioresource and Agricultural Engineering Commons^™

Methane And Carbon Dioxide Production From Simulated Anaerobic Degradation Of Cattle Carcasses, Qi Yuan, Samuel Saunders, Shannon L. Bartelt-Hunt

Department of Civil and Environmental Engineering: Faculty Publications

Approximately 2.2 million cattle carcasses require disposal annually in the United States. Land burial is a convenient disposal method that has been widely used in animal production for disposal of both daily mortalities as well as during catastrophic mortality events. To date, greenhouse gas production after mortality burial has not been quantified, and this study represents the first attempt to quantify greenhouse gas emissions from land burial of animal carcasses. In this study, anaerobic decomposition of both homogenized and unhomogenized cattle carcass material was investigated using bench-scale reactors. Maximum yields of methane and carbon dioxide were 0.33 and 0.09 m …

Fabrication And Characterization Of Dna-Loaded Zein Nanospheres, Mary C. Regier, Jessica D. Taylor, Tyler Borcyk, Yiqi Yang, Angela K. Pannier

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Background: Particulates incorporating DNA are promising vehicles for gene delivery, with the ability to protect DNA and provide for controlled, localized, and sustained release and transfection. Zein, a hydrophobic protein from corn, is biocompatible and has properties that make it a promising candidate material for particulate delivery, including its ability to form nanospheres through coacervation and its insolubility under physiological conditions, making it capable of sustained release of encapsulated compounds. Due to the promise of this natural biomaterial for drug delivery, the objective of this study was to formulate zein nanospheres encapsulating DNA as the therapeutic compound, and to …

Runoff Nutrient Loads As Affected By Residue Cover, Manure Application Rate, And Flow Rate, Chance Thayer, John E. Gilley, Lisa M. Durso, David B. Marx

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Manure is applied to cropland areas with varying surface cover to meet single‐year or multiple‐year crop nutrient requirements. The objectives of this field study were to: (1) examine runoff water quality characteristics following land application of manure to sites with and without wheat residue, (2) compare the water quality impacts of land application of manure to meet 0‐, 1‐, 2‐, 4‐, and 8‐year P‐based requirements for corn, and (3) evaluate the effects of varying runoff rates on runoff nutrient loads. Three 30‐min simulated rainfall events, separated by 24 h intervals, were applied at an intensity of 70 mm h^{‐1 …}

Quantification And Heterogeneity Of Infiltration And Transport In Alluvial Floodplains, Derek M. Heeren, Garey A. Fox, Daniel E. Storm, Peter Q. Storm, Brian E. Haggard, Todd Halihan, Ronald B. Miller

Department of Agricultural and Biological Systems Engineering: Faculty Publications

In order to protect drinking water systems and aquatic ecosystems, all critical nutrient source areas and transport mechanisms need to be characterized. It is hypothesized that hydrologic heterogeneities (e.g., macropores and gravel outcrops) in the subsurface of floodplains play an integral role in impacting flow and contaminant transport between the soil surface and shallow alluvial aquifers which are intricately connected to streams. Infiltration is often assumed to be uniform at the field scale, but this neglects the high spatial variability common in anisotropic, heterogeneous alluvial floodplain soils. In the Ozark ecoregion, for example, the erosion of carbonate bedrock (primarily limestone) …

Berm Method For Quantification Of Infiltration And Leaching At The Plot Scale In High Conductivity Soils, Derek M. Heeren, Garey A. Fox, Daniel E. Storm

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Measuring infiltration and leaching at the plot scale is difficult, especially for high hydraulic conductivity soils. Infiltration rate has been indirectly calculated at the plot scale by comparing surface runoff to rainfall. Direct measurement of infiltration and leaching beyond the point scale is typically limited to locations where land forming has been performed, e.g. infiltration ponds and fields with basin irrigation. The standard method for field measurement of infiltration is a double ring infiltrometer, which is limited in size (typically 30 cm diameter). In this research, a new method is proposed that uses a temporary berm constructed of a water …

Field Scale Modeling To Estimate Phosphorus And Sediment Load Reductions Using A Newly Developed Graphical User Interface For Soil And Water Assessment Tool, Aaron R. Mittelstet, Erin R. Daly, Daniel E. Storm, Michael J. White, Greg A. Kloxin

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Streams throughout the North Canadian River watershed in northwest Oklahoma, USA have elevated levels of nutrients and sediment. Soil and Water Assessment Tool (SWAT) was used to identify areas that likely contributed disproportionate amounts of Phosphorus (P) and sediment to Lake Overholser, the receiving reservoir at the watershed outlet. These sites were then targeted by the Oklahoma Conservation Commission (OCC) to implement conservation practices, such as conservation tillage and pasture planting as part of a US Environmental Protection Agency Section 319(h) project. Conservation practices were implemented on 238 fields. The objective of this project was to evaluate conservation practice effectiveness …

Whose Water Is It Anyway? Comparing The Water Rights Frameworks Of Arkansas, Oklahoma, Texas, New Mexico, Georgia, Alabama, And Florida, M. D. Smolen, Aaron R. Mittelstet, Bekki Harjo

Department of Agricultural and Biological Systems Engineering: Faculty Publications

In most states surface waters, (streams, lakes, and coastal waters) are owned by the public. On the other hand, ground water may be privately or publicly owned. Because all waters are linked through the hydrologic cycle, and the hydrologic cycle is not confined within any geographic or political boundary, the question of ownership is generally replaced by one of who has the right to manage, divert, use, or sell the water.

Selecting Sprinkler Packages For Center Pivots, Derrel L. Martin, William L. Kranz, Allen L. Thompson, Hong Liang

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Center pivots are the primary method of irrigation across the U.S. Great Plains. Center-pivot irrigation is also the fastest growing method of irrigation in the U.S. and around the world. Pivots have the potential to be very efficient and uniform if sprinkler devices are properly selected for local field conditions. New water application devices provide for selection that minimizes runoff and controls droplet sizes to reduce evaporation and drift losses. We present updates to models for computing runoff potential based on characteristics of sprinkler devices and soil textural classes. A dimensionless solution to the Green-Ampt infiltration method for center pivots …

Sensitivity Of Grass- And Alfalfa-Reference Evapotranspiration To Weather Station Sensor Accuracy, Dana O. Porter, Prasanna H. Gowda, Thomas H. Marek, Terry A. Howell, Jerry Moorhead, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

A sensitivity analysis was conducted to determine the relative effects of measurement errors in climate data input parameters on the accuracy of calculated reference crop evapotranspiration (ET) using the ASCE-EWRI Standardized Reference ET Equation. Data for the period of 1995 to 2008 from an automated weather station located at the USDA-ARS Conservation and Production Research Laboratory at Bushland, Texas were used for the analysis. Results

indicated that grass (ET_os) and alfalfa (ET_rs) reference crop ET were most sensitive to measurement errors in wind speed and air temperature followed by incoming shortwave (solar) radiation, and that data …

Swat: Model Use, Calibration, And Validation, Jeffrey G. Arnold, Daniel N. Moriasi, Philip W. Gassman, Karim C. Abbaspour, Michael J. White, Raghavan Srinivasan, Chinnasamy Santhi, Daren Harmel, Ann Van Griensven, Michael W. Van Liew, Narayanan Kannan, Manoj K. Jha

Department of Agricultural and Biological Systems Engineering: Faculty Publications

SWAT (Soil and Water Assessment Tool) is a comprehensive, semi-distributed river basin model that requires a large number of input parameters, which complicates model parameterization and calibration. Several calibration techniques have been developed for SWAT, including manual calibration procedures and automated procedures using the shuffled complex evolution method and other common methods. In addition, SWAT-CUP was recently developed and provides a decision-making framework that incorporates a semi-automated approach (SUFI2) using both manual and automated calibration and incorporating sensitivity and uncertainty analysis. In SWAT-CUP, users can manually adjust parameters and ranges iteratively between autocalibration runs. Parameter sensitivity analysis helps focus the …

Soil Water Extraction Patterns And Crop, Irrigation, And Evapotranspiration Water Use Efficiency Of Maize Under Full And Limited Irrigation And Rainfed Settings, Koffi Djaman, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The effects of full and limited irrigation and rainfed maize production practices on soil water extraction and water use efficiencies were investigated in 2009 and 2010 under center-pivot irrigation near Clay Center, Nebraska. Four irrigation regimes (fully irrigated treatment (FIT), 75% FIT, 60% FIT, and 50% FIT) and a rainfed treatment were implemented. The crop water use efficiency (CWUE, or crop water productivity), irrigation water use efficiency (IWUE), and evapotranspiration water use efficiency (ETWUE) were used to evaluate the water productivity performance of each

treatment. The seasonal rainfall amounts in 2009 and 2010, respectively, were 426 mm (18% below normal) …

Large-Scale On-Farm Implementation Of Soil Moisture-Based Irrigation Management Strategies For Increasing Maize Water Productivity, Suat Irmak, Michael J. Burgert, Haishun Yang, Kenneth G. Cassman, Daniel T. Walters, William R. Rathje, Jose O. Payero, Patricio Grassini, Mark S. Kuzila, Kelly J. Brunkhorst, Dean E. Eisenhauer, William L. Kranz, Brandy Vandewalle, Jennifer M. Rees, Gary L. Zoubek, Charles A. Shapiro, Gregory J. Teichmeier

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Irrigated maize is produced on about 3.5 Mha in the U.S. Great Plains and western Corn Belt. Most irrigation water comes from groundwater. Persistent drought and increased competition for water resources threaten long-term viability of groundwater resources, which motivated our research to develop strategies to increase water productivity without noticeable reduction in maize yield. Results from previous research at the University of Nebraska-Lincoln (UNL) experiment stations in 2005 and 2006 found that it was possible to substantially reduce irrigation amounts and increase irrigation water use efficiency (IWUE) and crop water use efficiency (CWUE) (or crop water productivity) with little or …

Evaporative Losses From A Common Reed-Dominated Peachleaf Willow And Cottonwood Riparian Plant Community, Isa Kabenge, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Our study is one of the first to integrate and apply within-canopy radiation physics parameters and scaling-up leaf-level stomatal resistace (r_L) to canopy resistance (r_c) approach to quantify hourly transpiration (TRP) rates of individual riparian plant species—common reed (Phragmites australis), peachleaf willow (Salix amygdaloides), and cottonwood (Populus deltoides)— in a mixed riparian plant community in the Platte River Basin in central Nebraska. Two experimental years (2009 and 2010) were contrasted by warmer air temperature and presence of flood water in 2010. The seasonal average r_c values for common reed, …

Curcumin-Loaded Magnetic Nanoparticles For Breast Cancer Therapeutics And Imaging Applications, Murali M. Yallapu, Shadi F. Othman, Evan T. Curtis, Nichole A. Bauer, Neeraj Chauhan, Deepak Kumar, Meena Jaggi, Subhash C. Chauhan

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Breast cancer is a commonly diagnosed cancer among women in the United States. It is estimated that 230,480 women were diagnosed with, and 39,520 women died from, breast cancer in 2011 in the United States.¹ Basal-like breast cancer accounts for 15% of all breast cancers and has a poor prognosis. The majority of these cancers are referred to as triple-negative breast cancers because they do not over express estrogen receptor, progesterone receptor, or human epidermal growth factor receptor 2.^2,3 Chemotherapy is an effective option to treat such cancers; however, chemotherapy is always associated with several sets of side …

Basin-Wide Remote Sensing Of Actual Evapotranspiration And Its Influence On Regional Water Resources Planning, Daniel J. Howes, Charles M. Burt, Kyle Feist

BioResource and Agricultural Engineering

The Irrigation Training & Research Center (ITRC) at Cal Poly State University, San Luis Obispo has been using METRIC to compute actual evapotranspiration from remote sensing sources (namely LandSAT images). The driving force behind this is the increasing need for improved evapotranspiration information on a large scale. A recent study in the Mexicali Valley of Baja California, Mexico utilized the ITRC-modified METRIC procedure to compute the crop and riparian evapotranspiration component of a basin-wide water balance. The resulting comparison between the mass balance computed change in groundwater storage and that computed using groundwater elevation data showed excellent agreement. For water …

Comparison Of Field Level And Regional Actual Etc Values Developed From Remote Sensing And Dual Crop Coefficient Procedure, Daniel J. Howes, Lucas Hoffmann, Franklin Gaudi

BioResource and Agricultural Engineering

Crop evapotranspiration (ETc) estimates are important for regional water planning as well as irrigation scheduling. Traditional ETc computations utilize published crop coefficients (basal) that are adjusted on a daily basis depending on soil water availability (i.e., dual crop coefficient method). Recent advancements include using remote sensing data such as LandSAT combined with a surface energy balance algorithm (METRIC), allowing crop evapotranspiration to be computed for each pixel throughout images taken during the season. There are limitations and advantages for both methods. Comparisons of soil water balance evapotranspiration values to METRIC values for two scenarios in different regions of California have …

P95. In Vivo Loads In The Cervical Spine: A Preliminary Investigation Using A Force-Sensing Implant, Rebecca A. Wachs, Mary Beth M. Grabowsky, Joseph C. Glennon, Eric H. Ledet

Department of Agricultural and Biological Systems Engineering: Faculty Publications

BACKGROUND CONTEXT: It is estimated that up to 80% of the general population will experience at least one significant bout of low back pain in their lifetime. The leading known cause of low back pain is degenerative disc disease (DDD). Many established risk factors for low back pain and DDD are mechanical in nature and are often related to occupational activities, such as poor posture and frequent/heavy lifting. Altered mechanical loading in the spine has been shown to be a potential stimulus for disc degeneration. However, a link between occupational/environmental factors and intervertebral loading has never been demonstrated in vivo. …

P96. Three-Dimensional Morphometry Of Human Cervical Endplates, Rebecca A. Wachs, Victoria M. Michna, Eric H. Ledet

Department of Agricultural and Biological Systems Engineering: Faculty Publications

BACKGROUND CONTEXT: Degeneration of the cervical intervertebral disc is the underlying cause for many patients suffering from neck and upper extremity pain. Anterior cervical discectomy and fusion, and cervical disc replacements are common, but next generation implants and less invasive surgical techniques are predicated on a comprehensive characterization of cervical endplate morphology. To date, cervical endplate morphometry has not been described in detail, and age-related and gender- dependent differences have not been characterized.

PURPOSE: The purposes of this research were to measure cervical endplate morphometry in both men and women across three decades of life and characterize age, gender, and …

Coupled Electromagnetic And Heat Transfer Model For Microwave Heating In Domestic Ovens, Krishnamoorthy Pitchai, Sohan Birla, Jeyamkondan Subbiah, D. D. Jones, Harshanardhan Thippareddi

Department of Food Science and Technology: Faculty Publications

Microwave ovens are used extensively for heating a variety of not-ready-to-eat food products. Non-uniform heating of foods in microwave ovens is a major concern in assuring microbiological safety of such products. The non-uniform heating of foods is attributed by complex interaction of microwaves with foods. To understand this complex interaction, a comprehensive model was developed to solve coupled electromagnetic and heat transfer equations using finite-difference time-domain based commercial software. The simulation parameters, cell size, heating time step, and number of iterations for steady state electromagnetic field were optimized. The model was validated by 30 s heating profile of a cylindrical …

Soil Phosphorus Availability And Buffering Capacity In Eastern South Dakota Assessed Using Quantity-Intensity Relationships And Diffusive Gradients In Thin Films, Rose Eitemiller

Electronic Theses and Dissertations

Phosphorus (P) availability is influenced by soil properties and depth, creating challenges for nutrient management across agricultural landscapes. This study evaluated two complementary approaches for quantifying P availability and adsorption dynamics in eastern South Dakota soils: Diffusive Gradients in Thin Films (DGT) and P quantity–intensity (Q–I) relationships. The objectives were to (1) quantify bioavailable P using DGT, (2) compare DGT measurements with established soil test P (STP), (3) evaluate Q–I parameters describing P adsorption characteristics, and (4) assess spatial variability in P availability across eastern South Dakota soils. DGT-measured P increased with STP levels and was strongly correlated with Bray-1, …

An Investigation Of Reflective Mulches For Use Over Capillary Mat Systems For Winter-Time Greenhouse Strawberry Production, George E. Meyer, Ellen T. Paparozzi, Elizabeth Walter-Shea, Erin E. Blankenship, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

Photosynthethically active radiation (PAR) is a principle environmental variable used by horticultural specialists, agronomists and ecosystem modelers to characterize the quantity and quality of light conducive to plant growth and development. Spatial distribution of PAR in a greenhouse can be quite variable and diffuse throughout the day time photoperiod, especially at low sun angles in northern regions of the United States. Four colors of reflective plastic mulches (white, red, olive, and black) were evaluated for winter-time strawberry (Fragaria × ananassa Duch.) production based on their reflectance and transmittance properties in a double-polyethylene, plastic-glazed Quonset greenhouse inNebraska. The spectral properties …

The Economics And Logistics Of The Dual Harvest Of Grain And Biomass In A Single-Pass, Matthew T. Wold

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Significant interest has developed in using cellulosic resources, especially crop residues, to create biofuels. Collecting these residues in a single-pass of the harvester across the field has the potential to be a low cost option. Two models have been developed; the first characterizes the in-field logistics of single-pass crop residue collection, the second the economics. These models allow the user to easily examine a wide variety of both grain-only and single-pass residue collection harvest cases. A variety of possible residue collection cases have been examined, and their effects both on harvester field capacity and harvest cost compared to grain-only harvest …

Irrigation Engineering In Seismic Zones - Mexicali Valley, Mexico, Alan Dennis Gracia, Charles M. Burt, Mario Paredes Vallejo

BioResource and Agricultural Engineering

On April 4, 2010 an earthquake of Richter magnitude 7.2 occurred with an epicenter south of Mexicali within the irrigated zone of Mexicali Valley. Extensive damage occurred to main and lateral canal structures, plus to field irrigation systems and the main drainage network. This paper describes the engineering for a new major irrigation water conveyance system to service the most heavily impacted zone of 80,000 acres. Considerations included identification of the causes of the damage, selection of canal versus pipeline, relocation costs of people along new routes, and improved flexibility of water delivery. Major investigations regarding soils, topography, etc. were …

Velocity Contour Weighting Method. Ii: Evaluation In Trapezoidal Channels And Roughness Sensitivity, Daniel Howes, Brett F. Sanders

BioResource and Agricultural Engineering

The Velocity Contour Weighting Method (VCWM) was developed in Part I to accurately estimate the cross-sectional average velocity of a prismatic channel flow using acoustic Doppler velocity meter (ADVM) measurements of centerline velocity. Here, the VCWM is validated by its successful application to 25 different concrete-lined trapezoidal channels used for irrigation water delivery. At each site, the cross-sectional distribution of velocity is measured by an acoustic Doppler velocimeter (ADV), which is moved horizontally and vertically through a sampling grid. Multiple tests at some sites led to a total of 51 sets of cross-sectional measurements. ADVM measurements are simulated by interpolating …

The Genome Portal Of The Department Of Energy Joint Genome Institute, Igor V. Grigoriev, Henrik Nordberg, Igor Shabalov, Andrea Aerts, Mike Cantor, David Goodstein, Alan Kuo, Simon Minovitsky, Roman Nikitin, Robin A. Ohm, Robert Otillar, Alex Poliakov, Igor Ratnere, Robert Riley, Tatyana Smirnova, Daniel Rokhsar, Inna Dubchak

United States Department of Energy: Publications

The Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility with massive-scale DNA sequencing and analysis capabilities dedicated to advancing genomics for bioenergy and environmental applications. Beyond generating tens of trillions of DNA bases annually, the Institute develops and maintains data management systems and specialized analytical capabilities to manage and interpret complex genomic data sets, and to enable an expanding community of users around the world to analyze these data in different contexts over the web. The JGI Genome Portal (http://genome.jgi.doe.gov) provides a unified access point to all JGI genomic databases and analytical tools. A user …

Velocity Contour Weighting Method. I: Algorithm Development And Laboratory Testing, Daniel J. Howes, Brett F. Sanders

BioResource and Agricultural Engineering

An algorithm is developed for real-time estimation of the cross-sectional average velocity of a channel flow by using an upward-looking pulsed wave acoustic Doppler velocity meters (ADVM). The Velocity Contour Weighting Method (VCWM) is applicable to gradually varied flows in prismatic channels and requires little to no calibration. VCWM estimates the average velocity as a weighted average of ADVM bin velocities. Weights are based on the velocity distribution sampled by the ADVM. Collectively, the VCWM is able to adapt to a wide range of channel geometry and roughness features. Expressions for the velocity weights are developed by first applying a …

Agricultural Irrigation Using Municipal Effluent, Charles M. Burt

BioResource and Agricultural Engineering

The paper describes the development of a design and management plan for disposing of secondary effluent originating in the urban communities. It highlights the differences in approach that a public utility must take, versus a typical agricultural irrigation application. Costs and requirements for municipal effluent irrigation are many times greater. The complexity of regulations and agency procurement procedures relegates the actual irrigation system design to a relatively small role in the total project.

History Of The Biological Systems Engineering Program In Nebraska, University Of Nebraska-Lincoln, William E. Splinter

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The Farm Machinery/Agricultural Engineering/Biological Systems Engineering program current and former faculty members at the University of Nebraska, as demonstrated here, has made a statewide, national, and worldwide impact on the efficient production of food. The quality of this recognition is evidenced best by peer professionals through recognized ASABE awards received by Nebraska alumni or professors. Since its inception in 1909 and until 2010, there have been 10 national presidents, 19 gold medal recipients and 33 named national award recipients. Currently there are 31 ASABE Fellows and two members of the National Academy of Engineering. This national recognition comes as a …

The Irrigation Sector Shift From Construction To Modernization: What Is Required For Success?, Charles M. Burt

BioResource and Agricultural Engineering

External pressures related to environmental protection, commodity prices, energy availability, larger populations, and climate change have combined to require an immediate and substantial improvement in agricultural irrigation performance. Worldwide progression towards modernized irrigation projects has been uneven and slower than desired, but decades of irrigation modernization development have clarified certain requirements for success, as well as illuminated indicators of project failure. Of particular importance are required shifts within the state and national irrigation bureaucracies, as well as universities.

Stage-Dependent Transient Storage Of Phosphorus In Alluvial Floodplains, Derek M. Heeren, Garey A. Fox, Ronald B. Miller, Daniel E. Storm, Amanda K. Fox, Chad J. Penn, Todd Halihan, Aaron R. Mittelstet

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Models for contaminant transport in streams commonly idealize transient storage as a well-mixed but immobile system. These transient storage models capture rapid (near-stream) hyporheic storage and transport, but do not account for large-scale, stage-dependent interaction with the alluvial aquifer. The objective of this research was to document transient storage of phosphorus (P) in coarse gravel alluvium potentially influenced by large-scale, stage-dependent preferential flow pathways (PFPs). Long-term monitoring was performed at floodplain sites adjacent to the Barren Fork Creek and Honey Creek in northeastern Oklahoma. Based on results from subsurface electrical resistivity mapping which was correlated to hydraulic conductivity data, observation …