Biogeochemistry Commons^™

Silica Uptake And Release In Live And Decaying Biomass In A Northern Hardwood Forest, Wim Clymans, Daniel J. Conley, John J. Battles, Patrick J. Frings, Mary Margaret Koppers, Gene E. Likens, Chris E. Johnson

Civil and Environmental Engineering - All Scholarship

In terrestrial ecosystems, a large portion (20–80%) of the dissolved Si (DSi) in soil solution has passed through vegetation. While the importance of this “terrestrial Si filter” is generally accepted, few data exist on the pools and fluxes of Si in forest vegetation and the rate of release of Si from decomposing plant tissues. We quantified the pools and fluxes of Si through vegetation and coarse woody debris (CWD) in a northern hardwood forest ecosystem (Watershed 6, W6) at the Hubbard Brook Experimental Forest (HBEF) in New Hampshire, USA. Previous work suggested that the decomposition of CWD may have significantly …

Limiting Nutrient Contaminants From Agricultural Non-Point Sources: Nutrient Monitoring At Eku’S Meadowbrook Farm, Madison County, Kentucky, Walter S. Borowski, Jonathan M. Malzone

EKU Faculty and Staff Scholarship

Sources of contamination to U.S. waterways have largely shifted from industrial, point sources to agricultural and other non-point sources associated with common human activities. EKU’s Meadowbrook Farm explores best-practices in agriculture and animal husbandry that not only act to increase the efficiency of farm operations, but also to limit environmental effects such as the eutrophification of its neighboring watershed.

We recently started a collaboration with the Farm and the EKU Department of Agriculture, which are developing methods to sequester phosphorus and thus limit nutrient export to the adjacent Muddy Creek watershed. Our task is to quantify the amount of phosphorus …

Sources, Distributions, And Dynamics Of Dissolved Organic Matter In The Canada And Makarov Basins, Yuan Shen, Ronald Benner, Lisa Robbins, Jonathan Wynn

Faculty Publications

A comprehensive survey of dissolved organic carbon (DOC) and chromophoric dissolved organic matter (CDOM) was conducted in the Canada and Makarov Basins and adjacent seas during 2010–2012 to investigate the dynamics of dissolved organic matter (DOM) in the Arctic Ocean. Sources and distributions of DOM in polar surface waters were very heterogeneous and closely linked to hydrological conditions. Canada Basin surface waters had relatively low DOC concentrations (69 ± 6 μmol L−1), CDOM absorption (a325: 0.32 ± 0.07 m−1) and CDOM-derived lignin phenols (3 ± 0.4 nmol L−1), and high spectral slope values (S275–295: 31.7 ± …

Comparison Of Permanganate-Oxidizable Carbon And Mineralizable Carbon For Assessment Of Organic Matter Stabilization And Mineralization, Tunsisa T. Hurisso, Steve W. Culman, William R. Horwath, Jordon Wade, Deandra Cass, Joshua W. Beniston, Timothy M. Bowles, A. Stuart Grandy, Alan J. Franzluebbers, Meagan E. Schipanski, Shawn T. Lucas, Carmen M. Ugarte

Faculty Publications

Permanganate-oxidizable C (POXC) and mineralizable C (as determined by short-term aerobic incubation of rewetted soil) are measures of active organic matter that may provide early indication of soil C stabilization and mineralization processes. To date, the relationship between these two promising active organic matter tests has not been comprehensively evaluated, and little is known about their functional role in the soil ecosystem. Here, we examined the relationship between POXC and mineralizable C across a wide range of soil types, management histories, and geographic locations across the United States (13 studies, 76 total sites; n = 1071) and the ability of …

Using Rare Earth Elements To Constrain Particulate Organic Carbon Flux In The East China Sea, Chin-Chang Hung, Ya-Feng Chen, Shih-Chieh Hsu, Kui Wang, Jianfang Chen, David J. Burdige

OES Faculty Publications

Fluxes of particulate organic carbon (POC) in the East China Sea (ECS) have been reported to decrease from the inner continental shelf towards the outer continental shelf. Recent research has shown that POC fluxes in the ECS may be overestimated due to active sediment resuspension. To better characterize the effect of sediment resuspension on particle fluxes in the ECS, rare earth elements (REEs) and organic carbon (OC) were used in separate two-member mixing models to evaluate trap-collected POC fluxes. The ratio of resuspended particles from sediments to total trap-collected particles in the ECS ranged from 82-94% using the OC mixing …

High-Resolution Signatures Of Oxygenation And Microbiological Activity In Speleothem Fluid Inclusions, Nigel Blamey, Penelope J. Boston, Laura Rosales-Lagarde

International Journal of Speleology

Speleothems frequently host “fossil” fluids that were trapped in small inclusions during growth. Such fluids may provide valuable clues to past microbial, geochemical, and climatic processes during their formation. However, one difficulty is to understand which gases represent background atmosphere and fluids within a given cave system at a particular time, and which may be the product of post-trapping residual microbial activity or abiotic chemical reactions? Do we have any hope of sorting out these differences? The success depends on a quantitative understanding of the gas composition trapped in the inclusions and an understanding of the interactions of cave mineralogy, …

Slowed Biogeochemical Cycling In Sub-Arctic Birch Forest Linked To Reduced Mycorrhizal Growth And Community Change After A Defoliation Event, Thomas C. Parker, Jesse J. Sadowsky, Haley Dunleavy, Jens-Arne Subke, Serita D. Frey, Philip A. Wookey

Faculty Publications

Sub-arctic birch forests (Betula pubescens Ehrh. ssp. czerepanovii) periodically suffer large-scale defoliation events caused by the caterpillars of the geometrid moths Epirrita autumnata and Operophtera brumata. Despite their obvious influence on ecosystem primary productivity, little is known about how the associated reduction in belowground C allocation affects soil processes. We quantified the soil response following a natural defoliation event in sub-arctic Sweden by measuring soil respiration, nitrogen availability and ectomycorrhizal fungi (EMF) hyphal production and root tip community composition. There was a reduction in soil respiration and an accumulation of soil inorganic N in defoliated plots, symptomatic of a slowdown …

Quantifying Peat Carbon Accumulation In Alaska Using A Process-Based Biogeochemistry Model, Sirui Wang, Qianlai Zhuang, Zicheng Yu, Scott Bridgham, Jason K. Keller

Education Faculty Articles and Research

This study uses an integrated modeling framework that couples the dynamics of hydrology, soil thermal regime, and ecosystem carbon and nitrogen to quantify the long-term peat carbon accumulation in Alaska during the Holocene. Modeled hydrology, soil thermal regime, carbon pools and fluxes, and methane emissions are evaluated using observation data at several peatland sites in Minnesota, Alaska, and Canada. The model is then applied for a 10,000 year (15 ka to 5 ka; 1 ka = 1000 cal years before present) simulation at four peatland sites. We find that model simulations match the observed carbon accumulation rates at fen sites …

Eleven Years Of Crop Diversification Alters Decomposition Dynamics Of Litter Mixtures Incubated With Soil, M. D. Mcdaniel, A. Stuart Grandy, Lisa K. Tiemann, Michael N. Weintraub

Faculty Publications

Agricultural crop rotations have been shown to increase soil carbon (C), nitrogen (N), and microbial biomass. The mechanisms behind these increases remain unclear, but may be linked to the diversity of crop residue inputs to soil organic matter (SOM). We used a residue mixture incubation to examine how variation in long-term diversity of plant communities in agroecosystems influences decomposition of residue mixtures, thus providing a comparison of the effects of plant diversification on decomposition in the long term (via crop rotation) and short term (via residue mixtures). Three crop residue mixtures, ranging in diversity from two to four species, were …

Development And Curation Of The Sample Data Library For The Astrobiogeochemistry Laboratory, Meika R. Nwaomah, Lorenia Jimenez, Michael Tuite

STAR Program Research Presentations

In 2011, the National Science Foundation (NSF) initiated EarthCube, an integrated cyber infrastructure initiative, to tackle challenges within geoscience research. EarthCube’s goal is to improve public access and collaboration within the geoscience community. During the summer of 2015, the Astrobiogeochemistry Laboratory (abcLab) joined the collective efforts of EarthCube by developing the Sample Data Library (SDL) for the Jet Propulsion Laboratory (JPL). The main focus of the SDL concentrates on effectively curating the samples collected by researchers within the Planetary Chemistry and Astrobiology section at JPL. The goal of this summer internship was to assimilate field notes, images, and from data …

The Role Of Organic Matter In The Fate And Transport Of Antibiotic Resistance, Metals, And Nutrients In The Karst Of Northwest Arkansas, Victor Lee Roland Ii

Graduate Theses and Dissertations

Organic matter (OM) in the environment acts as a nutrient, but may also act as a transport vector for harmful chemical compounds and bacteria. Acetate is a labile form of OM produced during fermentation in anaerobic lagoons used to store animal fecal-waste from concentrated animal feeding operations (CAFOs). Dry and liquid fertilizers from CAFOs pose a threat to groundwater by introducing excessive amounts of nutrients (e.g. OM, nitrate and ammonia), metals, and antibiotic compounds. In the epikarst of Northern Arkansas in the Buffalo River watershed additional input of labile dissolved organic carbon (DOC) from liquid CAFO waste-fertilizers was hypothesized to …

Precision Control Of Soil Nitrogen Cycling Via Soil Functional Zone Management, Alwyn Williams, Adam S. Davis, Patrick M. Ewing, A. Stuart Grandy, Daniel A. Kane, Roger T. A. Koide, David A. Mortensen, Richard G. Smith, Sieglinde S. Snapp, Kurt A. Spokas, Anthony C. Yannarell, Nicholas R. Jordan

Faculty Publications

Managing the soil nitrogen (N) cycle is a major component of agricultural sustainability. Soil functional zone management (zonal management) is a novel agroecological strategy for managing row-crop agroecosystems. It may improve the efficiency of soil N cycling compared with conventional and no-tillage approaches, by managing the timing and location (crop row vs inter-row) of key soil N cycling processes. We compared N mineralization and availability during the period of maize peak N demand in crop rows and inter-rows in zonal management and conventional chisel plow tillage systems at four sites across the US Corn Belt over three growing seasons. Under …

Coastal Ocean And Shelf-Sea Biogeochemical Cycling Of Trace Elements And Isotopes: Lessons Learned From Geotraces, Matthew A. Charette, Phoebe J. Lam, Maeve C. Lohan, Eun Young Kwon, Vanessa Hatje, Catherine Jeandel, Alan M. Shiller, Gregory A. Cutter, Alex Thomas, Philip W. Boyd

OES Faculty Publications

Continental shelves and shelf seas play a central role in the global carbon cycle. However, their importance with respect to trace element and isotope (TEI) inputs to ocean basins is less well understood. Here, we present major findings on shelf TEI biogeochemistry from the GEOTRACES programme as well as a proof of concept for a new method to estimate shelf TEI fluxes. The case studies focus on advances in our understanding of TEI cycling in the Arctic, transformations within a major river estuary (Amazon), shelf sediment micronutrient fluxes and basin-scale estimates of submarine groundwater discharge. The proposed shelf flux tracer …

Dissolved Organic Carbon Fluxes From A New England Salt Marsh, Hayley Nicole Schiebel

Graduate Doctoral Dissertations

Blue carbon systems (mangroves, salt marshes, and seagrass beds) sequester large amounts of carbon via primary productivity and sedimentation. Sequestered carbon can be respired back to the atmosphere, buried for long time periods, or exported (“outwelled”) to adjacent ecosystems. This study estimates the total outwelling of dissolved organic carbon (DOC) from the Neponset Salt Marsh (Boston, Massachusetts) as well as the major plant and sediment processes contributing to the overall flux. The total export was quantified via high-resolution in situ chromophoric dissolved organic matter (CDOM) measurements as a proxy for DOC using 12 years of transect data. Seasonal trends, alternate …

Cone In Cone Concretions Of The Stanley Group In Southeastern Oklahoma, Kyle B. Ayres

Electronic Theses and Dissertations

Cone in cone concretions found in the Stanley Group of Southeastern Oklahoma have a variety of external and internal attributes which allow diagenetic and theoretical models of formation to be hypothesized. Stanley Group carbonate cone in cone concretions are initially formed in sulfur reducing horizons at shallow burial depths in a poorly circulated possibly deep trough containing siliceous sediments and organic matter. Collected concretions near the town of Smithville, Oklahoma displayed four different external morphologies and four variations of mineral constituents. All concretions contained microscopic cones which initiated diffusion and/or fluid patterns and is an early cementation process that directly …

Compost Land Management And Soil Carbon Sequestration, Kylene A. Hohman

Senior Honors Projects, 2010-2019

Extensive fossil fuel burning has released carbon dioxide into the atmosphere. Under proper ecological conditions plants convert atmospheric carbon dioxide into stable soil organic matter, a natural and efficient means of mitigating climate change. In the symbiotic relationship between mycorrhizae and plants, mycorrhizae provide plants with essential nutrients in exchange for carbon sugars leaked from the plants. Mycorrhizae convert carbon sugars to an exudate called glomalin, a protein that assists in developing soil aggregates composed of sand, silt, and clay. These aggregates, called humus, store carbon for hundreds of years under healthy ecological conditions. Compost prompts soil microbes to aerobically …

Testing Of The Late-Ordovician Pre-Gice Warm Water Carbonate Hypothesis In Alabama, Brandon Euker, Stacey Law

Senior Honors Projects, 2010-2019

The Guttenberg Carbon Isotope Excursion (GICE) (uppermost Sandbian-lower Katian, Late Ordovician) has been suggested to represent the transition from a Cambrian-Ordovician greenhouse world to Late Ordovician icehouse world. This transition is thought to coincide with a proposed shift from deposition of warm water carbonate rocks to cool water carbonate rocks in the North American midcontinent. We used oxygen isotopes (d¹⁸O) of conodonts to test the idea that the rocks below the GICE interval represent a consistently warm environment. Conodonts were isolated from samples of the Chickamauga Group collected at the Tidwell Hollow section in Blount County, AL, from …

Patterns And Sources Of Anthropogenic Contaminants In The Otter Creek Watershed, Madison County, Kentucky, Elijah J. Wolfe

EKU Faculty and Staff Scholarship

Stream systems are often affected by anthropogenic activities that affect water quality and stream ecosystems. Land use typically determines the type and quantity of anthropogenic contaminants entering natural waters. The Otter Creek watershed (170 km²; Madison County, Kentucky) consists predominantly of pasture and rural housing, with some cropland. The basin also receives runoff from the town of Richmond and a sewage treatment plant operates within the watershed. We measured concentrations of nutrients (phosphate, ammonium, nitrate) and fecal microbes to discover levels of anthropogenic contaminants affecting water quality and to identify contaminant sources.

We sampled 4 times in the …

Statistical Modeling To Predict N2O Production Within The Hyporheic Zone By Coupling Denitrifying Microbial Community Abundance To Geochemical And Hydrological Parameters, Tiffany Brooke Farrell

Boise State University Theses and Dissertations

The hyporheic zone (HZ) of streams can be a significant source of nitrous oxide (N₂O). However, the biogeochemical processes controlling N₂O emissions remain poorly constrained due to difficulties in obtaining high-resolution chemical, physical, and biological data from streams. We performed a large-scale flume experiment to unravel the complexities of a natural system by constraining streambed morphology, flow rate, organic carbon loading, grain size distribution, and exogenous nitrate loading while enabling regular monitoring of dissolved oxygen, pH, alkalinity, and concentrations of NO₃^-, NO₂^-, NH₄⁺, and N₂O …

Dietary Effects On The Stoichiometry Of Growth, Regulation, And Wastes Of Ozark Stream Insect Detritivores, Halvor Matthew Halvorson

Graduate Theses and Dissertations

A widespread stressor, anthropogenic nitrogen (N) and phosphorus (P) pollution can increase resource nutrient content and alter animal community composition in freshwater ecosystems. In this dissertation, I used ecological stoichiometry theory to examine effects of diet nutrient content and leaf litter type on growth, regulation, and wastes of aquatic invertebrate detritivores. I tested effects of leaf litter diet carbon:phosphorus (C:P) on growth and stoichiometric regulation of the detritivorous caddisfly Pycnopsyche lepida and used results to determine a threshold elemental ratio of oak litter C:P=1620 that confers peak growth of this species. This empirical, growth-based approach provided a more accurate estimate …