Oceanography Commons^™

Effect Of Reworking And Bioturbation On Sedimentary Reactive Iron Within A Microtidal Estuary, Amy Kathleen Pitts

OES Theses and Dissertations

Mixed redox conditions in sediments due to physical reworking may allow for enhanced remineralization of refractory organic matter due to Fe(III) redox cycling. In part this may occur because easily reducible iron oxides can be used by heterotrophic bacteria to remineralize the organic carbon. This phenomena has been observed in bioturbated sediments and in areas where physical factors (such as strong bottom currents) constantly rework the sediments. To specifically determine the effects of physical reworking and bioturbation on concentrations of easily reducible iron oxides, reactive iron concentrations were measured in surface sediments taken from two contrasting sites in the York …

A Once And Future Gulf Of Mexico Ecosystem: Restoration Recommendations Of An Expert Working Group, Charles H. Peterson, Felicia C. Coleman, Jeremy B. C. Jackson, R. Eugene Turner, Gilbert T. Rowe, Richard T. Barber, Karen A. Bjorndal, Robert S. Carney, Robert K. Cowen, Jonathan M. Hoekstra, James T. Hollibaugh, Shirley B. Laska, Richard A. Luettich, Jr., Craig W. Osenberg, Stephen E. Roady, Stanley Senner, John M. Teal, Ping Wong

Faculty Publications

The Deepwater Horizon (DWH) well blowout released more petroleum hydrocarbons into the marine environment than any previous U.S. oil spill (4.9 million barrels), fouling marine life, damaging deep sea and shoreline habitats and causing closures of economically valuable fisheries in the Gulf of Mexico. A suite of pollutants—liquid and gaseous petroleum compounds plus chemical dispersants—poured into ecosystems that had already been stressed by overfishing, development and global climate change. Beyond the direct effects that were captured in dramatic photographs of oiled birds in the media, it is likely that there are subtle, delayed, indirect and potentially synergistic impacts of these …

Rumbling In The Benthos: Acoustic Ecology Of The California Mantis Shrimp Hemisquilla Californiensis, E. Staaterman, C. Clark, A. Gallagher, M. Devries, T. Claverie, S. Patek

Faculty Publications, Biological Sciences

Although much research has focused on acoustic mapping and exploration of the benthic environment, little is known about the acoustic ecology of benthic organisms, particularly benthic crustaceans. Through the use of a coupled audio–video system, a hydrophone array, and an autonomous recording unit, we tested several hypotheses about the field acoustics of a benthic marine crustacean, Hemisquilla califor­niensis. Living in muddy burrows in southern California, these large mantis shrimp produce low frequency ‘rumbles’ through muscle vibrations. First, we tested whether acoustic signals are similar in the field and in the laboratory, and discovered that field-produced rumbles are more acoustically and …

Controls On The Formation Of Algal Blooms In The Lower Chesapeake Bay And Its Tributaries, Ryan Eric Morse

OES Theses and Dissertations

Algal blooms occur seasonally in the Chesapeake Bay and its tributaries, and while the consequences of algal blooms have been qualitatively and quantitatively assessed, the causes of algal blooms and mechanisms of bloom initiation are still not well understood despite decades of research. In order to understand nutrient dynamics and other factors that promote the initiation of algal blooms, the Lafayette River, a tidal sub-estuary of Chesapeake Bay that experiences seasonal algal blooms, was sampled daily in the fall of 2005. Three phytoplankton blooms (Chlorophyll a concentrations exceeding twice the average of monthly measurements from 2000-2009) occurred during this period, …

Sustainability Series: Creating Student Sustainable Practices Within Sfs And Beyond, Staci Hagen

Capstone Collection

The School for Field Studies (SFS) is a non-profit environmental research based study abroad program that integrates academic, research, social and community activities in a holistic education model. One of the six SFS centers is the Center for Coastal Studies (CCS) in Baja California Sur, Mexico. At CCS, students take courses that explore local and regional environmental, social and economic problems and they have the opportunity to design their own research project. Even though students study these problems and come up with sustainable solutions, it does not mean that they make personal choices with the least impact on the environment. …

Model-Based Analyses Of Nitrogen On The Mid-Atlantic Bight Continental Shelf, Tian Tian

OES Theses and Dissertations

The biogeochemistry of continental shelf systems is an important, but poorly quantified, component of the global cycling of nitrogen and carbon. In this study, simulations obtained from a one-dimensional (ID) biogeochemical model developed for the Middle Atlantic Bight (MAB) portion of the U.S. eastern continental shelf were analyzed to investigate nitrogen cycling processes. The 1D model included lower trophic level interactions and was forced by advective fields obtained from a corresponding three-dimensional biogeochemical model. Taylor and target diagram analyses, which compared in situ measurements of sea surface temperature (SST) and salinity, and chlorophyll and particulate organic carbon (POC) derived from …

Analysis Of Roms Estimated Posterior Error Utilizing 4dvar Data Assimilation, Joseph Patrick Horton

Mathematics

The appropriateness of the approximate error calculated by the Regional Ocean Modeling System (ROMS) is analyzed using Four-Dimensional Data Assimilation (4DVAR) performed on a numerical model of the San Luis Obispo Bay. An effective method of sampling data to minimize the actual error associated with the assimilated numerical model is explored by using different data sampling methods. An idealized state of the SLO bay region ("Real Run") is created to be used as the real ocean, then a numerical model of this region is created approximating this Real Run; this is known as the "Simulated State". By taking samples from …

Submerged Pressure Differential Wave Energy Converter, Christopher F. Ferguson

Physics

As supplies of fossil fuels are becoming depleted, it is necessary to look for alternative sources of energy. The ocean is a vast, largely untapped source of renewable energy. This project attempts to design a device which can cheaply and reliably convert the energy from ocean waves into usable electrical energy. Computer simulations and oceanographic knowledge are utilized to develop a working design for an entirely submerged wave energy conversion device.

2010 Massachusetts Recreational Boater Survey: Final Report Submitted To The Massachusetts Ocean Partnership, Dan Hellin, Jack Wiggin, Kristin Uiterwyk, Kim Starbuck, Nicholas Napoli, David Terkla, Chris Watson, Anthony Roman, Leona Roach, Tim Welch

Urban Harbors Institute Publications

The Massachusetts Ocean Management Plan (Plan) completed in 2009 recognized recreational boating as an activity with “significant actual and prospective conflicts among multiple waterway uses in Massachusetts” and included the economic value of recreational boating as a key socio-economic indicator that will be used to inform coastal management. At the time of Plan completion, statistically robust recreational boating data were identified as an important need for comprehensive ocean planning.

To fill this data gap, the 2010 Massachusetts Recreational Boater Survey gathered information on boating activity in Massachusetts’ coastal and ocean waters directly from recreational boaters. Researchers sent 10,000 surveys to …

Systems Ideas For The Scientific And Societal Imperatives Of The Coastal Ocean: Case Of The Bp Oil Gusher In The Gulf Of Mexico, Spring & Summer 2010, Christopher Mooers

Systems Science Friday Noon Seminar Series

In recent decades, great progress has been made in advancing the scientific understanding of the coastal ocean (i.e., the 200 nautical mile Exclusive Economic Zone (EEZ)) across a broad set of disciplines. Simultaneously, the societal use of the coastal ocean has skyrocketed through, for example, increased shipping & boating, sports & commercial fishing, and exploitation of non-living resources, such as, oil & gas extraction and sand & gravel mining. International law and national policy assign coastal nations the responsibility for stewardship (i.e., wise management) of their respective EEZs. The scope of the stewardship and applications can be summarized as (1) …

Coastal Inundation Due To Storm Surge As Sea Level Changes Along The Northern South Carolina And Southern North Carolina Coast, Justin Hartnett

Honors Theses

This study made use of the storm surge model in Peng, Xie, and Pietrafesa (2004) and Xia et al. (2004), to predict coastal inundation along northern South Carolina and southern North Carolina as sea level rises. Hurricane Hazel (1954) was used as the reference hurricane in this study, which made landfall at 33.85°N, 78.57°W, as a category 4 hurricane. Data was plotted and analyzed using Matlab, to produce inundation maps for four sea level rises (0.2m, 0.6m, 1.0m, and 2.0m). The greatest net storm surge was produced during a 2m sea level rise, which in return caused the greatest amount …

A Comparison Of Fish Growth Rates In A Pristine And An Urbanized Salt Marsh Estuary, Katherine Stohl

Honors Theses

Fish grow as they age, but not all fish grow at the same rate. Internal and external factors such as stress and food availability can change the growth rate. This study looks to see if the growth rates vary between North Inlet and Murrell’s Inlet, SC for red drum and striped mullet. Red drum grew faster and showed a typical length-frequency graph in North Inlet. The cause of the difference in growth was not tested, but human influence on the estuaries was considered to be a possible factor.

Super-Aggregations Of Krill And Humpback Whales In Wilhelmina Bay, Antarctic Peninsula, Douglas P. Nowacek, Ari S. Friedlaender, Patrick N. Halpin, Elliott L. Hazen, David W. Johnston, Andrew J. Read, Boris Espinasse, Meng Zhou, Yiwu Zhu

Environmental, Earth, and Ocean Sciences Faculty Publication Series

Ecological relationships of krill and whales have not been explored in the Western Antarctic Peninsula (WAP), and have only rarely been studied elsewhere in the Southern Ocean. In the austral autumn we observed an extremely high density (5.1 whales per km²) of humpback whales (Megaptera novaeangliae) feeding on a super-aggregation of Antarctic krill (Euphausia superba) in Wilhelmina Bay. The krill biomass was approximately 2 million tons, distributed over an area of 100 km² at densities of up to 2000 individuals m⁻³; reports of such ‘super-aggregations’ of krill have been absent in …

Investigating The Potential For Nitrate-N Removal In Rhode Island Transient Headwater Streams, Molly Welsh, Kelly Addy, Art Gold, Suzanne Cox

Discovery@URI

Excess nitrogen (N) can have detrimental effects on the environment, particularly in coastal waters where inputs from septic systems and agricultural runoff can lead to algal blooms and hypoxic zones. However, transient headwater streams, which comprise a significant portion of streams in watersheds, may have the potential to remove N given their low flow rates, high surface to volume ratios, long retention times, and hydric soils. We investigated the physical characteristics and N removal capacity of transient headwater streams. Four bromide (Br) and nitrate-N slug tests were conducted in four streams in southern RI. Streams were sampled repeatedly as the …

Development Of High Resolution Sea Floor Mapping Tools And Techniques, Gabrielle Inglis, J. Ian Vaughn, Clara Smart, Christopher N. Roman

Graduate School of Oceanography Faculty Publications

There is a persistent need for high resolution photographic and bathymetric maps of the sea floor for many research areas in marine geology, biology and archaeology. This poster will present recent work using high frequency multibeam sonars, stereo vision and structured light laser imaging techniques to create maps with centimeter resolution for these applications. This research involves the development of new image and sonar processing techniques that combat the typical difficulties of imperfect navigation information, limited sensor ranges and adverse environmental conditions associated with using marine robotic vehicles in the ocean. Data for this work has been collected with the …

Population Dynamics Of Sheepshead (Archosargus Probatocephalus; Walbaum 1792) In The Chesapeake Bay Region: A Comparison To Other Areas And An Assessment Of Their Current Status, Joseph Charles Ballenger

OES Theses and Dissertations

Sheepshead recently have seen an increase in fishing pressure in Virginian waters of the Chesapeake Bay. This increase in fishing pressure has led to demands to install effective management measures to protect the fishery. However, no study regarding the population dynamics, and thus potential yield, of sheepshead has been conducted north of Cape Hatteras. We addressed the need for information regarding the population dynamics of Chesapeake Bay sheepshead by investigating their age distribution, growth rate and reproductive biology. We used this information to construct yield-per-recruit models, which local management agencies may use in the formation of scientifically based management measures. …

Exploration Of The Anaximander Mud Volcanoes, Timothy M. Shank, Santiago Herrera, Walter Cho, Christopher N. Roman, Katherine L. Croff Bell

Graduate School of Oceanography Faculty Publications

No abstract provided.

Landscape Imaging Of The Southeast Aegean Sea, Michael L. Brennan, Tufan Turanli, Bridget Buxton, Katherine L. Croff Bell, Christopher N. Roman, Meko Kofahl, Orkan Koyagasioglu, Daniel Whitesell, Thomas Chamberlain, Richard Sullivan, Robert Ballard

Graduate School of Oceanography Faculty Publications

No abstract provided.

Development Of High-Resolution Underwater Mapping Techniques, Christopher N. Roman, Gabrielle Inglis, J. Ian Vaughn, Stefan Williams, Oscar Pizarro, Ariell Friedman, Daniel Steinberg

Graduate School of Oceanography Faculty Publications

No abstract provided.

Maritime History Of Anzac Cove, Michael L. Brennan, Dwight Coleman, Christopher N. Roman, Tufan Turanli, Dan Davis, Alexis Catsambis, James Moore, Maureen Merrigan, Brennan Bajdek, Daniel Whitesell, Robert Ballard

Graduate School of Oceanography Faculty Publications

No abstract provided.

Exploration Of The Kolumbo Volcanic Rift Zone, Steven Carey, Katherine L. Croff Bell, Paraskevi Nomikou, Georges Vougioukalakis, Christopher N. Roman, Kathleen Cantner, Konstantina Bejelou, Maria Bourbouli, Julie Fero Martin

Graduate School of Oceanography Faculty Publications

No abstract provided.

Summer 2011, Nova Southeastern University

Currents

No abstract provided.

Human Sanitary Wastes And Waste Treatment In New York City, David J. Tonjes, Christine O'Connell, Omkar Aphale, R. Lawrence Swanson

Technology & Society Faculty Publications

Henry Hudson first sailed toNew Yorkharbor 400 years ago. Since then,New York Cityhas both affected and been affected by water quality in greaterNew YorkHarbor. In this paper, we focus on sewers, sewerage, and sewage treatment inManhattanand their effects on theHudson River. It is clear that feedbacks among drinking water quality and quantity, population, public perceptions, regulations, and estuarine water quality exist, although their strength and character have varied over time. Early land uses damaged local water supplies found on ManhattanIsland. New Yorkthen began to exploit the large fresh water resources available to its north, which helped the City to expand …

Evaluating Methods For Optimizing Classification Success From Otolith Tracers For Spotted Seatrout (Cynoscion Nebulosus) In The Chesapeake Bay, Stacy Kavita Beharry

OES Theses and Dissertations

Identifying the natal sources of fish is an important step in understanding its population dynamics. Adult recruits are often sourced from multiple nursery areas, with good quality locations contributing disproportionately more fish to the adult stock. Because population persistence is strongly influenced by nursery habitat, methods that correctly identify the source of recruits are necessary for effective management. Within the last decade, otolith chemistry signatures have been increasingly used as a natural marker to delineate fish from a mixture of nursery sources. Despite the widespread use of otolith trace element and stable isotope ratios as habitat markers, the statistical approaches …

Use Of Sarima Models To Assess Data-Poor Fisheries: A Case Study With A Sciaenid Fishery Off Portugal, Nuno Prista, Norou Diawara, Maria J. Costa, Cynthia M. Jones

OES Faculty Publications

Research on assessment and monitoring methods has primarily focused on fisheries with long multivariate data sets. Less research exists on methods applicable to data-poor fisheries with univariate data sets with a small sample size. In this study, we examine the capabilities of seasonal autoregressive integrated moving average (SARIMA) models to fit, forecast, and monitor the landings of such data-poor fisheries. We use a European fishery on meagre (Sciaenidae: Argyrosomus regius), where only a short time series of landings was available to model (n=60 months), as our case-study. We show that despite the limited sample size, a SARIMA model could …

Anaerobic Oxidation Of Methane And The Stoichiometry Of Remineralization Processes In Continental Margin Sediments, David J. Burdige, Tomoko Kamada

OES Faculty Publications

In many coastal and continental margin sediments, pore-water property-property plots yield values of r_c:s, the stoichiometric ratio of dissolved inorganic carbon (DIC) produced to sulfate reduced, that are lower than the commonly assumed value of 2. Remineralization of organic matter more reduced than CH₂O can cause such observations, as can DIC loss due to authigenic carbonate precipitation. However, through studies of Santa Monica Basin sediments, we have observed that these observations could also be related to the occurrence of anaerobic oxidation of methane (AOM) in sediments. Specifically, using a reactive transport sediment model, we have shown …

Cascading Migrations And Implications For Vertical Fluxes In Pelagic Ecosystems, Stephen M. Bollens, Gretchen Rollwagen-Bollens, Joel A. Quenette, Alexander B. Bochdansky

OES Faculty Publications

Diel vertical migration is widespread across diverse taxa in the world's lakes and seas, yet its biogeochemical consequences are still poorly understood. The biologically mediated vertical flux of material in the ocean (also known as the "biological pump") is a matter of major interest and concern, as it is thought to play an important role in regulating ocean carbon storage, and by extension, the global carbon cycle. Recent studies spanning multiple trophic levels from fish to dinoflagellates have led us to a concept of coupled vertical migrations that we refer to as "cascading migrations". That is, migrations that …

Modern Dirty Sea Ice Characteristics And Sources: The Role Of Anchor Ice, Dennis A. Darby, Wesley B. Myers, Martin Jakobsson, Ignatius Rigor

OES Faculty Publications

Extensive dirty ice patches with up to 7 kg m^-2 sediment concentrations in layers of up to 10 cm thickness were encountered in 2005 and 2007 in numerous areas across the central Arctic. The Fe grain fingerprint determination of sources for these sampled dirty ice floes indicated both Russian and Canadian sources, with the latter dominating. The presence of benthic shells and sea weeds along with thick layers (2-10 cm) of sediment covering 5-10 m² indicates an anchor ice entrainment origin as opposed to suspension freezing for some of these floes. The anchor ice origin might explain the …

Draft Genome Sequence Of Strain Himb100, A Cultured Representative Of The Sar116 Clade Of Marine Alphaproteobacteria, Jana Grote, Cansu Bayindirli, Kristin Bergauer, Paula C. De Moraes, Huan Chen, Lindsay D'Ambrosio, Bethany Edwards, Beatriz Fernandez-Gomez, Mariam Hamisi, Dan Nguyen, Yoshimi M. Rii, Emily Saeck, Charles Schutte, Brittany Widner

OES Faculty Publications

Strain HIMB100 is a planktonic marine bacterium in the class Alphaproteobacteria. This strain is of interest because it is one of the first known isolates from a globally ubiquitous clade of marine bacteria known as SAR116 within the family Rhodospirillaceae. Here we describe preliminary features of the organism, together with the draft genome sequence and annotation. This is the second genome sequence of a member of the SAR116 clade. The 2,458,945 bp genome contains 2,334 protein-coding and 42 RNA gene

Florida Straits Deglacial Temperature And Salinity Change: Implications For Tropical Hydrologic Cycle Variability During The Younger Dryas, Matthew W. Schmidt, Jean Lynch-Stieglitz

OES Faculty Publications

The prevailing paradigm of abrupt climate change holds that rapid shifts associated with the most extreme climate swings of the last glacial cycle were forced by changes in the strength and northward extension of Atlantic Meridional Overturning Circulation (AMOC), resulting in an abrupt reorganization of atmospheric circulation patterns with global teleconnections. To determine the timing of tropical Atlantic atmospheric circulation changes over the past 21 ka BP, we reconstruct high resolution sea surface temperature and δ¹⁸O_SW (a proxy for surface salinity) records based on Mg/Ca ratios and oxygen isotope measurements in the planktonic foraminifera Globigerinoides ruber from …