Oceanography Commons^™

Multi-Satellite Image Matching And Deep Learning Segmentation For Detection Of Daytime Sea Fog Using Gk2a Ami And Gk2b Goci-Ii, Jonggu Kang, Hiroyuki Miyazaki, Seung Hee Kim, Menas Kafatos, Daesun Kim, Jinsoo Kim, Yangwon Lee

Institute for ECHO Articles and Research

Traditionally, sea fog detection technologies have relied primarily on in situ observations. However, point-based observations suffer from limitations in extensive monitoring in marine environments due to the scarcity of observation stations and the limited nature of measurement data. Satellites effectively address these issues by covering vast areas and operating across multiple spectral channels, enabling precise detection and monitoring of sea fog. Despite the increasing adoption of deep learning in this field, achieving further improvements in accuracy and reliability necessitates the simultaneous use of multiple satellite datasets rather than relying on a single source. Therefore, this study aims to achieve higher …

Stability Analysis Of Thermohaline Convection With A Time-Varying Shear Flow Using The Lyapunov Method, Kalin Kochnev

Honors Scholar Theses

This work applies the Lyapunov method to identify instabilities and compute the growth rate of a linear time-varying system. The linear system studied describes cold fresh water on top of hot salty water with a periodically time-varying background shear flow. A time-dependent weighting matrix is employed to construct a Lyapunov function candidate. The resulting linear matrix inequalities are discretized in time using the forward Euler method. As the number of temporal discretization points increases, the growth rate predicted by the Lyapunov method or Floquet theory, used for comparison, will converge to the same value obtained from numerical simulations. Furthermore, the …

A Sedimentary Source Of Rare Earth Elements In The North Atlantic, Rylee D. Lindner

Electronic Theses and Dissertations

Individually and as a series, the Rare Earth Elements (REEs) are powerful geochemical tracers of environmental processes. However, ambiguities in the oceanic budgets of the REEs hamper their application. Growing evidence suggests a sedimentary benthic flux via the pore water is the major source of REEs to the ocean, with extrapolated estimates of this flux being equivalent in magnitude to that “missing” from modern budgets. However, existing pore water REE data are available from only a few locations globally with no representative dataset from the open North Atlantic. This data scarcity limits our ability to constrain flux estimates and understand …

Understanding Enso Through Mathematical Models, Maria I. Sanchez Muniz

Open Educational Resources

This assignment introduces students to conceptual models of the El Niño–Southern Oscillation (ENSO) and guides them through a structured investigation of their physical and mathematical foundations. Students analyze the recharge–oscillator and delayed–oscillator frameworks, explore how differential equations capture ocean–atmosphere interactions, and evaluate parameter-driven changes in oscillatory behavior. A key component of the work is the guided use of generative AI as a research tool: students employ AI models to locate peer-reviewed literature, interrogate model extensions, and refine their understanding of complex mechanisms, while synthesizing all final explanations in their own words. By blending classical climate modeling with modern AI-supported inquiry, …

Floodplain Lake Hydrodynamic And Morphodynamic Connections Through Hydraulic Modeling Along The Pee Dee River, Sc, Charles Cj Mina

Electronic Theses and Dissertations

Rivers have been essential in the success of humankind. This reliance has created a vested interest in studying the rivers' environmental history through using floodplain deposits, with the assumption that coarser sediments correlate to higher discharge floods. However, shifting hydrological connectivity and hydrodynamics can complicate this correlation in primary repositories of flood deposits, oxbow lakes, by altering the texture of sediments delivered to them. Studying these complications is essential for quantifying paleoflood magnitude using the sediment record, but has been difficult, as the currently used index of hydrological connectivity relies on water stage, which does not reflect the sediment flux …

Aluminum As A Tracer Of Dust Deposition To The Ocean: A Case Study From The Bermuda Region, Tara Elizabeth Williams

OES Theses and Dissertations

Aluminum (Al), a major component of mineral aerosol (dust), partially dissolves in seawater and is widely used as a tracer for estimating time‐averaged dust fluxes to the ocean. Such estimates rely on dissolved Al (DAl) inventories in the surface mixed layer (SML), an assumed SML residence time of DAl (_TDAl), the fractional solubility of Al in dust (Al_S), and the mass fraction of Al in dust. In this study, dust flux estimated from seasonal, water-column DAl data from the Bermuda Atlantic Time-series Study (BATS) region are compared with direct dust flux estimated from contemporaneous measurements of …

Evaluation Of Ocean Lidar Enhancement Through Miniaturization And Gated Pmt-Based Range Extension, Chandler Austin Slater

OES Theses and Dissertations

Oceanographic lidar systems remotely characterize the vertical structure of the upper ocean by recording the light backscattered from a laser pulse as it propagates through the water column. Historically these systems have been constrained by limited detection ranges, often capturing only a portion of the illuminated water column, typically fading to noise around the 10% isolume. A primary constraint has been the limited dynamic range of digitizers, which inhibits the ability to resolve both intense near-field and faint far-field backscatter signals within a single acquisition. To address this, we developed a novel optical lidar system incorporating gated photomultiplier tubes (PMTs) …

Coupled Machine Learning Models: Combining Observations And Numerical Analysis In A Physics-Regularized Approach, Austin B. Schmidt

LSU New Orleans Theses and Dissertations

This dissertation investigates surrogate modeling for fixed-location environmental forecasting using novel data-combination techniques. The work surveys the landscape of observational measurements and numerically generated data, identifying similar research and gaps in current methodologies. The ratio-coupled training framework is introduced to combine two data sources per predicted feature through a tunable parameter that weights training signal strength. An optimization scheme is developed to simultaneously tune surrogate weights and the coupled signal ratio, allowing relative influence between signals to act as an explicit regularizer. Three case studies demonstrate the methodology and approach in a variety of contexts. The first study is based …

Isolation Of The 2019 Bonnet Carré Spillway Effects On The Habitat Suitability Of Brown Shrimp (Farfantepenaeus Aztecus) And Blue Crab (Callinectes Sapidus) Using A Modeling Approach, Mallory Dyson

Master's Theses

In 2019, an unprecedented flood year, the Bonnet Carré Spillway (BCS) was opened on two separate occasions (February 27^th to April 11^th, and May 10^th through July 27^th) diverting a volume 6 times the volume of Lake Pontchartrain into the surrounding coastal waters of Louisiana, Mississippi, and Alabama. The goal of this research was to determine the spatio-temporal influence of these freshwater releases on two economically and ecologically important species (Farfantepenaeus aztecus and Callinectes sapidus) with variable responses to salinity and temperature depending on the age class. The Habitat Suitability Index (HSI) …

Margalefidinium Polykrikoides Group Iii Va, Usa Strain Growth And Sac-Like Pellicle Cyst Dynamics, Eduardo Pérez Vega

OES Theses and Dissertations

Margalefidinium polykrikoides is a harmful cosmopolitan dinoflagellate that blooms in coastal waters. The effect of temperature and salinity on the growth of M. polykrikoides VA strain was examined using microscopy and growth models. M. polykrikoides Group III VA strain grew better at warmer temperatures and lower salinities than M. polykrikoides Group III NY strain, Group I Korea strain, and Japan strain (unknown group). Modelers need to use the temperature and salinity growth responses from M. polykrikoides Group III VA strain to better simulate and predict M. polykrikoides blooms in the Chesapeake Bay.

Dinoflagellates produce cysts as a strategy to withstand …

A Generational Analysis Of Psychological Motivators Influencing Seafarer Retention, Perisah Tahanci

The Plymouth Student Scientist

Seafarer retention is a growing concern amid increasing global demand for skilled maritime officers. This study investigates the generational differences in psychological motivators influencing seafarer retention, where ‘psychological motivators’ encompass the cognitive factors, including mental and physical wellbeing, work-life balance, compensation, working conditions, and external factors, that shape retention intentions. A cross-sectional survey (n=214) combined quantitative and qualitative analyses to systematically assess how the perceived importance and experience of these factors vary across Generation Z, Millennials, Generation X, and Baby Boomers.

The findings reveal that significant generational differences exist across most factors, particularly in work-life balance and mental wellbeing, in …

What Environmental Circumstances Generate Hazardous Wave Overtopping Conditions For Infrastructure Disruption: Dawlish (United Kingdom) Case Study, Zbigniew Tomasz Zielonka

The Plymouth Student Scientist

Coastal infrastructure faces increasing threats from wave overtopping due to climate change, rising sea levels, and intensifying storms. This research investigates the environmental conditions that drive hazardous wave overtopping using Dawlish, a vulnerable section of the UK’s railway, as a case study. Understanding these conditions is essential for improving knowledge, developing effective mitigation strategies, and enhancing the resilience of shoreline defences against future challenges. Using one-year observations from WireWall instruments, offshore wave buoy, and meteorological data, the research applies a Random Forest model to assess the influence of metocean conditions on overtopping. The results indicate that wave height, tidal level, …

An Investigation Of Paleoclimate Through A Sedimentological Lens In The Gulf Of Mexico And Western North Pacific, Sarah Monica

Dissertations

This dissertation explores the use of sediment cores as proxy data for the reconstruction of paleoclimatic and environmental conditions. Human-caused climate change is leading to dramatic shifts in the global climate. As the instrumental record of climate is relatively short compared to the amount of time Earth has experienced weather, this work aims to extend our knowledge of climate beyond the instrumental record, thereby improving our holistic understanding of the climate system. In Chapter one, sediment cores from the central Texas inner shelf are used to produce a record of intense tropical cyclone (TC) activity over a ~4500-year period. X-Ray …

Streams Guidelines: Standards For Technical Reporting In Environmental And Host-Associated Microbiome Studies, Julia M. Kelliher, Chloe Mirzayi, Sarah R. Bordenstein, Aaron Oliver, Christina A. Kellogg, Eneida L. Hatcher, Maureen Berg, Petr Baldrian, Mashael Aljumaah, Cassandra Maria Luz Miller, Christopher Mungall, Vlastimil Novak, Alexis Palucki, Ethan Smith, Nazifa Tabassum, Gregory Bonito, J. Rodney Brister, Patrick S. Chain, Mingfei Chen, Samuel Degregori, Xuefeng Peng, Et. Al.

Faculty Publications

The interdisciplinary nature of microbiome research, coupled with the generation of complex multi-omics data, makes knowledge sharing challenging. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines provide a checklist for the reporting of study information, experimental design and analytical methods within a scientific manuscript on human microbiome research. Here, in this Consensus Statement, we present the standards for technical reporting in environmental and host-associated microbiome studies (STREAMS) guidelines. The guidelines expand on STORMS and include 67 items to support the reporting and review of environmental (for example, terrestrial, aquatic, atmospheric and engineered), synthetic and non-human host-associated microbiome …

Benthic Infaunal Responses To Shoreline Restoration, Jessica Lauren Cline

Theses and Dissertations

In the age of increasing urban coastal sprawl, natural shorelines are being replaced by hard armoring structures, which result in the loss of valuable ecosystem services. Hybrid living shorelines, areas that include limited and less intensive armoring strategies paired with the integration of plants and other natural materials, present an opportunity to marry the need for more aggressive stabilization with the continued preservation of ecosystem functions and biological communities. This project uses benthic infauna to evaluate the success of a living shoreline installation in Palm Bay, Florida. The deployment features experimental treatments of breakwaters and red mangroves to explore how …

Locations Of Outfalls In The Indian River Lagoon And Lake Worth Lagoon, Florida, Kelly M. Kibler, Melinda J. Donnelly, Vincent Encomio, Madison Giuntoli, Manisha Thenuwara, Brice Bennett, Laura Andrade Barron, Mariam Sonbol, Wynter Raine Seppala, Namritha Ramakrishnan, Jennifer Jordan Báez, Beth Orlando, Irene Arpayoglou, Melissa Meisenburg

Indian River Lagoon Shorelines

The spatial dataset: UCF_Outfalls_IRL_LWL.shp was created under grants from the Indian River Lagoon National Estuaries Program and Florida Sea Grant. These projects cumulatively led to creation of a living shoreline restoration prioritization model and hydrodynamic habitat suitability models for 1,550 km (963 miles) of estuarine shorelines in Indian River Lagoon (IRL) and Lake Worth Lagoon (LWL).

The dataset presented here includes the location of outfalls identified throughout the study region and general characteristics of the shoreline where they were identified.

Seagrass Persistence In The Indian River Lagoon And Lake Worth Lagoon, Florida, Kelly Kibler, Melinda Donnelly, Vincent Encomio, Madison Giuntoli, Manisha Thenuwara, Brice Bennett, Laura Andrade Barron, Mariam Sonbol, Wynter Raine Seppala, Namritha Ramakrishnan, Jennifer Jordan Báez, Beth Orlando, Irene Arpayoglou, Melissa Meisenburg

Indian River Lagoon Shorelines

The spatial dataset: UCF_seagrasspersistence_IRL_LWL.shp was created with support from the Indian River Lagoon National Estuaries Program and Florida Sea Grant. These projects cumulatively led to creation of a living shoreline restoration prioritization model and hydrodynamic habitat suitability models for 1,550 km (963 miles) of estuarine shorelines in Indian River Lagoon (IRL) and Lake Worth Lagoon (LWL). The dataset presented herein represents persistence of seagrass throughout waters of the IRL and LWL.

Living Shoreline Prioritization And Hydrodynamic Habitat Suitability Models For Restoration In The Indian River Lagoon And Lake Worth Lagoon, Florida, Kelly M. Kibler, Melinda J. Donnelly, Vincent Encomio, Madison Giuntoli, Manisha Thenuwara, Brice Bennett, Laura Andrade Barron, Mariam Sonbol, Wynter Raine Seppala, Namritha Ramakrishnan, Jennifer Jordan Báez, Beth Orlando, Irene Arpayoglou, Melissa Meisenburg

Indian River Lagoon Shorelines

The spatial dataset: UCF_shorelinemodel_IRL_LWL.shp, was created with support from the Indian River Lagoon National Estuaries Program and Florida Sea Grant. These projects cumulatively led to creation of a living shoreline restoration prioritization model and hydrodynamic habitat suitability models for 1,550 km (963 miles) of estuarine shorelines in Indian River Lagoon and Lake Worth Lagoon.

The dataset presented herein includes:

1. shoreline data from >15,000 transects collected in the field,
2. shoreline wave climate data created through hydrodynamic modeling and frequency analysis of historic data,
3. categorization of potential risk for shoreline boat wake impact,
4. persistence of seagrass within 210 m of the shoreline, …

Technology Transfer In The Implementation Of The Biodiversity Beyond National Jurisdiction Agreement, Christine Nzambi Mulatya

World Maritime University Dissertations

No abstract provided.

Combating Illegal, Unreported And Unregulated (Iuu) Fishing In Argentina : Role Of Argentinian Coastguard As Maritime Authority In Charge Of Law Enforcement, Mario Damian Tiscornia

World Maritime University Dissertations

No abstract provided.

Flow Structure And Mixing Near A Small River Plume Front: Winyah Bay, Sc, Usa, Christopher Papageorgiou, George Voulgaris, Alexander E. Yankovsky, Diane Bennett Fribance

Faculty Publications

This study presents Eulerian data from Winyah Bay, SC, USA collected during the passage of a tidal plume. The data captured the evolution and structure of the plume and include high-resolution velocity and temperature time series, supplemented by temperature – salinity profiles from a MicroCTD profiler. The observations identified a pre-existing plume extending to 4 m, with a water density of 1023.6 kg m⁻³, laying above denser ambient waters. Upon arrival, the newly discharged tidal plume introduced a fresher layer (1020.7 kg m⁻³) extending to 2.6 m, gradually thinning due to radial spreading. The plume's frontal …

Flow Structure And Mixing Near A Small River Plume Front: Winyah Bay, Sc, Usa, Christopher Papageorgiou, George Voulgaris, Alexander E. Yankovsky, Diane Bennett Fribance

Faculty Publications

This study presents Eulerian data from Winyah Bay, SC, USA collected during the passage of a tidal plume. The data captured the evolution and structure of the plume and include high-resolution velocity and temperature time series, supplemented by temperature – salinity profiles from a MicroCTD profiler. The observations identified a pre-existing plume extending to 4 m, with a water density of 1023.6 kg m⁻³, laying above denser ambient waters. Upon arrival, the newly discharged tidal plume introduced a fresher layer (1020.7 kg m⁻³) extending to 2.6 m, gradually thinning due to radial spreading. The plume's frontal …

Interactions And Community Structure Of Fungi And Prokaryotes In Salt And Brackish Marsh Ecosystems, Madeleine A. Thompso, Xuefeng Peng

Faculty Publications

Microbial communities play a fundamental role in biogeochemical cycling within salt and brackish marsh ecosystems, yet fungal-prokaryotic interactions in these environments remain poorly understood. This study employed metabarcoding of the 16S and 28S rRNA genes to investigate prokaryotic and fungal communities across four locations in sediments and surface waters of the North Inlet salt marsh and Winyah Bay brackish marsh (South Carolina, USA) over four time points from 2020 to 2021. Co-occurrence network analyses were used to identify potential microbial interactions and their ecological implications. Distinct fungal and prokaryotic communities were observed between the two marsh types. From the 16S …

Decreasing Foraminiferal Flux In Response To Ongoing Climate Change In The Santa Barbara Basin, California, Emily Harvard, Katherine Cherry, Claudia R. Benitez-Nelson, Eric Tappa, Catherine V. Davis

Faculty Publications

The rapid response of foraminiferal assemblages to changing climate makes their shells an invaluable geological record of the past. However, the time frame over which foraminifera respond to climatic signals and the specific drivers influencing assemblage composition and abundance remain obscure. We focus on the impact of ongoing, anthropogenic climate change on planktic foraminifera in the California Current ecosystem, which would appear as a nearly instantaneous event in the sediment record. The Santa Barbara Basin sediment trap, located off the coast of California, USA since 1993, provides a record of more than 30 years of particulate and foraminiferal flux in …

Topological And Information-Theoretic Analysis Of Climate-Driven Indonesian Throughflow Dynamics, Sandy H. S. Herho, Katarina E.P. Herho, Iwan P. Anwar, Rusmawan Suwarman

Northeast Journal of Complex Systems (NEJCS)

The Indonesian Throughflow (ITF) represents the sole tropical pathway connecting Pacific and Indian Oceans, yet quantitative understanding of climate mode influences on its variability remains incomplete. We applied information-theoretic and topological frameworks to analyze 34 years (1984-2017) of observational ITF transport data alongside ENSO and IOD indices. Bootstrap analysis revealed pronounced ITF seasonality with 13.28 Sv amplitude peaking in September, contrasting with negligible climate index annual cycles, indicating scale separation in forcing mechanisms. Multi-method extrema detection identified 36-41 extreme events per variable, with 23.1% coincidence between ENSO and IOD high extrema confirming known co-occurrence patterns. Ensemble information-theoretic metrics demonstrated ENSO …

Ocean And Coastal Acidification Monitoring Priorities For The Northeast Us And Eastern Canada, Christopher Hunt, Austin Pugh, Jake Kritzer, Samantha Siedlecki, Kumiko Azetsu-Scott, Parker Gassett, Diane Lavoie, Adam Pimenta, Amy Trice, Elizabeth Turner

Faculty Publications

The Interagency Working Group on Ocean Acidification Monitoring Prioritization Plan 2024 calls for Coastal Acidification Networks to identify the ocean and coastal acidification (OCA) monitoring needs most important for their regions. The Northeast Coastal Acidification Network (NECAN) organized a webinar series to study regional needs, which culminated with a workshop in November 2023. This workshop led to the identification of six priority new Monitoring Needs in addition to the maintenance of current monitoring efforts:

• Improve spatial and temporal scale of monitoring co-located OCA variables and biological measurements to better resolve variability of acidification dynamics in concert with biological processes …

The Effects Of Varying Temperatures And Food Availability On The Reproductive Output Of The Acorn Barnacle: Chthamalus Fissus, Karina L. Rog

McNair Summer Research Program

Climate change is predicted to intensify ocean warming and the reduction in phytoplankton abundance, potentially disrupting reproductive processes in filter-feeding intertidal invertebrates. This study investigated the combined effects of water temperature increases and food availability on the reproductive output on Chthamalus fissus, a dominant intertidal barnacle species found along the Southern California coastline. Using a controlled laboratory experiment, adult barnacles collected from the nearshore rocky intertidal habitat in La Jolla, California, were exposed to two temperature regimes (ambient water temperature ~ 18°C and elevated water temperature ~ 20-21°C) and two food concentration treatments (low and high phytoplankton and rotifer …

A 12,800-Year-Old Layer With Cometary Dust, Microspherules, And Platinum Anomaly Recorded In Multiple Cores From Baffin Bay, Christopher R. Moore, Vladimir A. Tselmovich, Malcolm A. Lecompte, Allen West, Stephen J. Culver, David J. Mallinson, Mohammed Baalousha M.Sc, Ph.D., James P. Kennett, William M. Napier, Michael Bizimis, Victor Adedeji, Seth R. Sutton, Gunther Kleteschka, Kurt A. Langworthy, Jesus P. Perez, Timothy Witwer, Marc D. Young, Jordan Jeffreys, Richard C. Greenwood, James A. Malley

Faculty Publications

The Younger Dryas Impact Hypothesis (YDIH) posits that ~12,800 years ago Earth encountered the debris stream of a disintegrating comet, triggering hemisphere-wide airbursts, atmospheric dust loading, and the deposition of a distinctive suite of extraterrestrial (ET) impact proxies at the Younger Dryas Boundary (YDB). Until now, evidence supporting this hypothesis has come only from terrestrial sediment and ice-core records. Here we report the first discovery of similar impact-related proxies in ocean sediments from four marine cores in Baffin Bay that span the YDB layer at water depths of 0.5–2.4 km, minimizing the potential for modern contamination. Using scanning electron microscopy …

Expanded Genetic And Functional Diversity Of Oceanic Fungi, Xuefeng Peng, David L. Valentine

Faculty Publications

Background

Fungi are known members of marine microbiomes that can act as saprotrophs, parasites, and pathogens. Although a few studies utilizing cultivation-based methods and metabarcoding have been conducted, the diversity, ecological roles, and functional activities of fungi in the open ocean remain vastly underexplored. This gap in knowledge is particularly notable in oxygen minimum zones (OMZ) of the ocean, which have expanded over the past 50 years, affecting marine ecosystems and biogeochemical cycles. The eastern tropical North Pacific Ocean (ETNP) is the largest oxygen minimum zone where fungi have been implicated in the production of the potent greenhouse gas nitrous …

Improving Coastal Hydrodynamic Model Performance Through Parameter Sensitivity Analysis And Optimization, Sunni Siqueira Allen

LSU New Orleans Theses and Dissertations

This thesis presents a framework for parameter sensitivity analysis and optimization of coastal hydrodynamic models. The research uses the Generalized Likelihood Uncertainty Estimation (GLUE) method to quantify parameter sensitivity and identify optimal values for currents, wave height, and water level. A variance-based technique guides parameter selection when GLUE yields competing values or when observations are unavailable.

The framework is demonstrated through two case studies: Hurricane Michael (2018) and the ExCaliBur field study (2022) near Oceanside, CA. Results from Hurricane Michael show higher optimal hydrodynamic model bottom friction values near the hurricane's landfall location. The Oceanside study identifies the hydrodynamic model's …