Oceanography Commons^™

Deglacial Variability Of Antarctic Intermediate Water Penetration Into The North Atlantic From Authigenic Neodymium Isotope Ratios, Ruifang C. Xie, Franco Marcantonio, Matthew W. Schmidt

OES Faculty Publications

Understanding intermediate water circulation across the last deglacial is critical in assessing the role of oceanic heat transport associated with Atlantic Meridional Overturning Circulation variability across abrupt climate events. However, the links between intermediate water circulation and abrupt climate events such as the Younger Dryas (YD) and Heinrich Event 1 (H1) are still poorly constrained. Here, we reconstruct changes in Antarctic Intermediate Water (AAIW) circulation in the subtropical North Atlantic over the past 25 kyr by measuring authigenic neodymium isotope ratios in sediments from two sites in the Florida Straits. Our authigenic Nd isotope records suggest that there was little …

Solar Forcing Of Florida Straits Surface Salinity During The Early Holocene, Matthew W. Schmidt, William A. Weinlein, Franco Marcantonio, Jean Lynch-Stieglitz

OES Faculty Publications

Previous studies showed that sea surface salinity (SSS) in the Florida Straits as well as Florida Current transport covaried with changes in North Atlantic climate over the past two millennia. However, little is known about earlier Holocene hydrographic variability in the Florida Straits. Here, we combine Mg/Ca-paleothermometry and stable oxygen isotope measurements on the planktonic foraminifera Globigerinoides ruber (white variety) from Florida Straits sediment core KNR166-2 JPC 51 (24° 24.70' N, 83° 13.14' W, 198 m deep) to reconstruct a high-resolution (~25 yr/sample) early to mid Holocene record of sea surface temperature and δ¹⁸O_SW)(a …

Fall 2012, Nsu Oceanographic Center

Currents

No abstract provided.

Improving Sea Level Reconstructions Using Non-Sea Level Measurements, B. D. Hamlington, R. R. Leben, K.-Y. Kim

CCPO Publications

We present a new method for reconstructing sea level involving cyclostationary empirical orthogonal functions (CSEOFs). While we show results from a CSEOF reconstruction using basis functions computed from satellite altimetry and subsequently fit to tide gauge data, our focus is on how other ocean observations such as sea surface temperature can be leveraged to create an improved reconstructed sea level data set spanning the time period from 1900 to present. Basis functions are computed using satellite measurements of sea surface temperature, and using a simple regression technique, these basis functions are transformed to represent a similar temporal evolution to corresponding …

Analysis Of Relative Sea Level Variations And Trends In The Chesapeake Bay: Is There Evidence For Acceleration In Sea Level Rise?, Tal Ezer, William B. Corlett

CCPO Publications

Over the past few decades the pace of relative sea level rise (SLR) in the Chesapeake Bay (CB) has been 2-3 times faster than that of the globally mean absolute sea level. Our study is part of ongoing research that tries to determine if this SLR trend is continuing at the same pace, slowing down (SLR deceleration) or speeding up (SLR acceleration). We introduce a new analysis method for sea level data that is based on Empirical Mode Decomposition (EMD) and Hilbert-Huang Transform (HHT); the analysis separates the SLR trend from other oscillating modes of different scales. Bootstrap calculations using …

Circulation And Water Properties And Their Relationship To The Oyster Disease Msx In Delaware Bay, Zhiren Wang, Dale B. Haidvogel, David Bushek, Susan E. Ford, Eileen E. Hofmann, Eric N. Powell, John Wilkin

CCPO Publications

We apply a high-resolution hydro-dynamical model to investigate the role of physical factors influencing infection prevalence of Haplosporidium nelsoni, causative agent of MSX disease in the eastern oyster (Crassostrea virginica), in Delaware Bay, USA. Validation studies conducted for the years 2000 and 2010-2011 confirm that the model, based upon the Regional Ocean Modeling System, has significant skill in the recovery of observed water level, temperature, salinity, and velocity. Multi-year simulations are performed for periods representing temporal and spatial variations in H. nelsoni infection prevalence (1974-76, 1979-81, 1984-86, 1990-92, and 2006-09) to assess the degree to which the …

The Rise And Fall Of Crassostrea Virginica Oyster Reefs: The Role Of Disease And Fishing In Their Demise And A Vignette On Their Management, Eric N. Powell, John M. Klinck, Kathryn Ashton-Alcox, Eileen E. Hofmann, Jason Morson

CCPO Publications

We describe a model designed to simulate the shell carbonate budget of an oyster reef.We identify five parameters descriptive of basic characteristics of the shell carbonate budget of a reef that limit simulation accuracy. Two describe the TAZ (taphonomically-active zone) and the distribution of shell carbonate within it. One is the taphonomic rate in the TAZ. Two determine the volume contribution of shell carbonate and the taphonomic loss rate within the reef framework. For Mid-Atlantic estuaries, model simulations suggest that reef accretion only occurs if oyster abundance is near carrying capacity. Simulations further suggest that reef accretion is infeasible for …

Circulation And Behavior Controls On Dispersal Of Eastern Oyster (Crassostrea Virginica) Larvae In Delaware Bay, Diego A. Narvaez, John M. Klinck, Eric N. Powell, Eileen E. Hofmann, John Wilkin, Dale B. Haidvogel

CCPO Publications

The degree of genetic connectivity among populations in a metapopulation has direct consequences for species evolution, development of disease resistance, and capacity of a metapopulation to adapt to climate change. This study used a metapopulation model that integrates population dynamics, dispersal, and genetics within an individual-based model framework to examine the mechanisms and dynamics of genetic connectivity within a metapopulation. The model was parameterized to simulate four populations of oysters (Crassostrea virginica) from Delaware Bay on the mid-Atlantic coast of the United States. Differences among the four populations include a strong spatial gradient in mortality, a spatial gradient …

Modeling The Dispersal Of Eastern Oyster (Crassostrea Virginica) Larvae In Delaware Bay, Diego A. Narvaez, John M. Klinck, Eric N. Powell, Eileen E. Hofmann, John Wilkin, Dale B. Haidvogel

CCPO Publications

The interactions of circulation and growth processes in determining the horizontal distribution of eastern oyster (Crassostrea virginica) larvae in the Delaware Bay estuary were investigated with a coupled circulation-individual-based larvae model that used environmental conditions from the spawning seasons (mid-June to mid-September) of 1984, 1985, 1986, 2000, and 2001. Particles, representing oyster larvae, were released at five-day intervals from areas in Delaware Bay that correspond to natural oyster reefs. The simulated larval development time was used to estimate potential larval success, determined by the percent of larvae that successfully reached settlement size (330 µm) within the planktonic larval …

Can Oysters Crassostrea Virginica Develop Resistance To Dermo Disease In The Field: The Impediment Posed By Climate Cycles, Eric N. Powell, John M. Klinck, Ximing Guo, Eileen E. Hofmann, Susan E. Ford, David Bushek

CCPO Publications

Populations of eastern oysters, Crassostrea virginica, are commonly limited by mortality from dermo disease. Little development of resistance to Perkinsus marinus, the dermo pathogen, has occurred, despite the high mortality rates and frequency of epizootics. Can the tendency of the parasite to exhibit cyclic epizootics limit the oyster's response to the disease despite the presence of alleles apparently conferring disease resistance? We utilize a gene-based population dynamics model to simulate the development of disease resistance in Crassostrea virginica populations exposed to cyclic mortality encompassing periodicities expected of dermo disease over the geographic range at which epizootics have been …

Does Large-Scale Ocean Circulation Structure Life History Connectivity In Antarctic Toothfish (Dissostichus Mawsoni)?, Julian Ashford, Michael S. Dinniman, Cassandra Brooks, Allen H. Andrews, Eileen E. Hofmann, Gregor Cailliet, Christopher Jones, Nakul Ramanna

CCPO Publications

A multidisciplinary approach incorporating otolith chemistry, age data, and numerical Lagrangian particle simulations indicated a single, self-recruiting population of Antarctic toothfish (Dissostichus mawsoni) in the Southeast Pacific Basin (SPB) and Ross Sea, with a life history structured by the large-scale circulation. Chemistry deposited prior to capture along otolith edges demonstrated strong environmental heterogeneity, yet the chemistry in otolith nuclei, deposited during early life, showed no differences. Age data showed only adult fish in catches on the Pacific-Antarctic Ridge in the SPB and structuring of life stages consistent with transport pathways from the northern Ross Sea. Lagrangian particle simulations …

Could Satellite Altimetry Have Improved Early Detection And Warning Of The 2011 Tohoku Tsunami?, B. D. Hamlington, R. R. Leben, O. A. Godin, E. Gica, V. V. Titov, B. J. Haines, S. D. Desai

CCPO Publications

The 2011 Tohoku tsunami devastated Japan and affected coastal populations all around the Pacific Ocean. Accurate early warning of an impending tsunami requires the detection of the tsunami in the open ocean. While the lead-time was not sufficient for use in warning coastal populations in Japan, satellite altimetry observations of the tsunami could have been used to improve predictions and warnings for other affected areas. By comparing to both model results and historical satellite altimeter data, we use near-real-time satellite altimeter measurements to demonstrate the potential for detecting the 2011 Tohoku tsunami within a few hours of the tsunami being …

A Conceptual Model Of An Arctic Sea, P. St-Laurent, F. Straneo, D. G. Barber

CCPO Publications

We propose a conceptual model for an Arctic sea that is driven by river runoff, atmospheric fluxes, sea ice melt/growth, and winds. The model domain is divided into two areas, the interior and boundary regions, that are coupled through Ekman and eddy fluxes of buoyancy. The model is applied to Hudson and James Bays (HJB, a large inland basin in northeastern Canada) for the period 1979-2007. Several yearlong records from instruments moored within HJB show that the model results are consistent with the real system. The model notably reproduces the seasonal migration of the halocline, the baroclinic boundary current, spatial …

Wet, Wild & Convivial? Investigating Australia’S Ocean Pools, Marie-Louise Mcdermott

ECU Research Week

No abstract provided.

Isotopic Characterization Of Aerosol Organic Carbon Components Over The Eastern United States, Andrew S. Wozniak, James E. Bauer, Rebecca M. Dickhut, Xu Li, Ann P. Mcnichol

Chemistry & Biochemistry Faculty Publications

Carbon isotopic signatures (δ¹³C, Δ¹⁴C) of aerosol particulate matter total organic carbon (TOC) and operationally defined organic carbon (OC) components were measured in samples from two background sites in the eastern U.S. TOC and water-soluble OC (WSOC)δ¹³C values (−27 to −24‰) indicated predominantly terrestrial C₃ plant and fossil derived sources. Total solvent extracts (TSE) and their aliphatic, aromatic, and polar OC components were depleted in δ¹³C (−30 to −26‰) relative to TOC and WSOC. Δ¹⁴C signatures of aerosol TOC and TSE (−476 to +25‰) suggest variable fossil contributions (∼5–50%) …

Patterns Of Extinction Risk And Threat For Marine Vertebrates And Habitat-Forming Species In The Tropical Eastern Pacific, Beth A. Polidoro, T. Brooks, Kent E. Carpenter, G. J. Edgar, S Henderson, J. Sanciangco, D. R. Robertson

Biological Sciences Faculty Publications

Marine conservation activities around the globe are largely undertaken in the absence of comprehensive species-specific information. To address this gap, complete regional species assemblages of major marine taxa are being progressively assessed against the Categories and Criteria of the International Union for the Conservation of Nature (IUCN) Red List of Threatened Species. The present study is the first analysis of entire major components of the biota of a large marine biogeographic region conducted in the Tropical Eastern Pacific (TEP). It is based on recently completed IUCN Red List assessments for all known species of bony and cartilaginous shorefishes, corals, mangroves, …

Antarctic Surface Melting Dynamics: Enhanced Perspectives From Radar Scatterometer Data, L. D. Trusel, K. E. Frey, S. B. Das

Geography

Antarctic ice sheet surface melting can regionally influence ice shelf stability, mass balance, and glacier dynamics, in addition to modulating near-surface physical and chemical properties over wide areas. Here, we investigate variability in surface melting from 1999 to 2009 using radar backscatter time series from the SeaWinds scatterometer aboard the QuikSCAT satellite. These daily, continent-wide observations are explored in concert with in situ meteorological records to validate a threshold-based melt detection method. Radar backscatter decreases during melting are significantly correlated with in situ positive degree-days as well as meltwater production determined from energy balance modeling at Neumayer Station, East Antarctica. …

On The Spatial And Temporal Variability Of Upwelling In The Southern Caribbean Sea And Its Influence On The Ecology Of Phytoplankton And Of The Spanish Sardine (Sardinella Aurita), Digna Tibisay Rueda-Roa

USF Tampa Graduate Theses and Dissertations

The Southern Caribbean Sea experiences a strong upwelling process along the coast from about 61°W to 75.5°W and 10-13°N. In this dissertation three aspects of this upwelling system are examined: (A) A mid-year secondary upwelling that was previously observed in the southeastern Caribbean Sea between June-July, when land based stations show a decrease in wind speed. The presence and effects of this upwelling along the whole southern Caribbean upwelling system were evaluated, as well as the relative forcing contribution of alongshore winds (Ekman Transport, ET) and wind-curl (Ekman Pumping, EP). (B) Stronger upwelling occurs in two particular regions, namely the …

Sea Surface Height: A Versatile Climate Variable For Investigations Of Decadal Change, Philip Robert Thompson

USF Tampa Graduate Theses and Dissertations

Decadal variations in climate are important, because the magnitude of sustained decadal change is often much larger than the often discussed background trends. Climate variability at interannual and longer periods is most often discussed in the context of climate modes defined by sea level pressure (SLP) and sea surface temperature (SST) patterns. However, SLP and SST are not capable descriptors of ocean dynamics. The approximately two decades of global sea surface height (SSH) measurements from satellite altimetry reveal substantial low-frequency redistributions of heat and salt in the ocean, which may or may not be related to defined climate modes. In …

Optical Detection And Classification Of Phytoplankton Taxa Through Spectral Analysis, Daniel Tyler Sensi

USF Tampa Graduate Theses and Dissertations

Phytoplankton serve as the bottom of the marine food web and therefore play an essential role in marine ecosystems. On the other hand, coastal phytoplankton communities can adversely affect the marine ecosystem and humans. A variety of techniques have been developed to measure and study phytoplankton, including in situ methods (e.g., flow cytometry) and laboratory methods (e.g., microscopic taxonomy). These provide accurate measurements of phytoplankton taxa and concentrations, yet they are limited in space and time, and synoptic information is difficult to obtain with these techniques.

Optical remote sensing may provide complementary information for its synoptic nature, as demonstrated by …

Testing The Limits Of Hyperspectral Airborne Remote Sensing By Mapping Eelgrass In Elkhorn Slough, Kelley J. Bostrom

Master's Theses

Seagrass ecosystems are a valuable resource, but vulnerable to changing conditions in the coastal ocean. Quantification of seagrass density and distribution from aerial imagery can be applied as a tool in resource management and ecosystem health and stability monitoring. This study investigates analytical methods for mapping eelgrass beds in an optically complex shallow, turbid estuary. Hyperspectral imagery (HSI) of Elkhorn Slough, CA was collected by the Spectroscopic Aerial Mapper with Onboard Navigation (SAMSON) instrument. In-situ data of water column and benthic optical properties and Hydrolight Radiative Transfer model were used to create a spectral library describing the reflectance of Elkhorn …

Lesson Not Learned: Deepwater Horizon Research And Media Coverage Exposes Gaps In Knowledge And Risky Protocol Within The Oil Industry, Lauren Haller

Honors Theses

An insatiable thirst for oil has led poorly coordinated, risk-prone megasystems deeper into the ocean in search of new oil reserves. Profit-driven agendas at the corporate level have a top-down effect within these megasystems. Cost-cutting and risk-downplaying leaves the field employees unprepared to handle emergencies. A series of costly mistakes led to the 2010 BP Deepwater Horizon oil spill, which caused extensive damage to an already fragile ecosystem in the Gulf of Mexico. The wealth and political influence of the oil industry overpowers lax regulatory agencies and legislation-even though media and research has exposed frustrating parallels between the Deepwater Horizon …

Detection Of Diffuse Sea Floor Venting Using Structured Light Imaging, Gabrielle Inglis, Clara Smart, Christopher Roman, Steven Carey

Graduate School of Oceanography Faculty Publications

Efficiently identifying and localizing diffuse sea floor venting at hydrothermal and cold seep sites is often difficult. Actively venting fluids are usually identified by a temperature induced optical shimmering seen during direct visual inspections or in video data collected by vehicles working close to the sea floor. Relying on such direct methods complicates establishing spatial relations between areas within a survey covering a broad area. Our recent work with a structured light laser system has shown that venting can also be detected in the image data in an automated fashion. A structured light laser system consists of a camera and …

Remote Analysis Of Grain Size Characteristic In Submarine Pyroclastic Deposits From Kolumbo Volcano, Greece, Clara Smart, D. P. Whitesell, Christopher N. Roman, Steven Carey

Graduate School of Oceanography Faculty Publications

Grain size characteristics of pyroclastic deposits provide valuable information about source eruption energetics and depositional processes. Maximum size and sorting are often used to discriminate between fallout and sediment gravity flow processes during explosive eruptions. In the submarine environment the collection of such data in thick pyroclastic sequences is extremely challenging and potentially time consuming. A method has been developed to extract grain size information from stereo images collected by a remotely operated vehicle (ROV). In the summer of 2010 the ROV Hercules collected a suite of stereo images from a thick pumice sequence in the caldera walls of Kolumbo …

Environmental Influences On Juvenile Fish Abundances In A River-Dominated Coastal System, Laure Carassou, Brian Dzwonkowski, Frank J. Hernandez, Jr., Sean P. Powers, William M. Graham, Kyeong Park, John Mareska

University Faculty and Staff Publications

We investigated the influence of climatic and environmental factors on variations in juvenile abundances of marine fishes in a river-dominated coastal system of the north-central Gulf of Mexico, where an elevated primary productivity sustains fisheries of high economic importance. Fish were collected monthly with an otter trawl at three stations near Mobile Bay from 1982 to 2007. Fish sizes were used to isolate juvenile stages within the data set, and monthly patterns in juvenile fish abundance and size were then used to identify seasonal peaks for each species. The average numbers of juvenile fish collected during these seasonal peaks in …

Production And Fate Of Transparent Exopolymer Particles In The Ocean, Oliver Wurl, Lisa Miller, Svein Vagle

OES Faculty Publications

The production and fate of transparent exopolymer particles (TEP) have been investigated in various oceanic regions (tropical, temperate, and polar), from the sea surface microlayer (SML) to the deep ocean. Accumulation of TEP within the mixed layer was observed even in the absence of phytoplankton blooms, indicating abiotic processes are important in TEP production. The abiotic TEP aggregation rates measured in the tropical and temperate North Pacific and the Arctic Ocean averaged between 8 and 12 μmol C L^-1 d-¹. Depth profiles from under sea ice in the Arctic revealed the highest TEP concentrations, potentially released by …

Concept Tests For A New Wire Flying Vehicle Designed To Achieve High Horizontal Resolution Profiling In Deep Water, Chris Roman, Dave Hebert

Graduate School of Oceanography Faculty Publications

Efficiently profiling the water column to achieve both high vertical and horizontal resolution from a moving vessel in deep water is difficult. Current solutions, such as CTD tow-yos, moving vessel profilers, and undulating tow bodies, are limited by ship speed or water depth. As a consequence, it is difficult to obtain oceanographic sections with sufficient resolution to identify many relevant scales over the deeper sections of the water column. This paper presents a new concept for a profiling vehicle that slides up and down a towed wire in a controlled manner using the lift created by wing foils. The wings …

Estimating Oil Concentration And Flow Rate With Calibrated Vessel-Mounted Acoustic Echo Sounders, Thomas C. Weber, Alex De Robertis, Shep Smith, Samuel F. Greenaway, Larry A. Mayer, Glen Rice

Center for Coastal and Ocean Mapping

As part of a larger program aimed at evaluating acoustic techniques for mapping the distribution of subsurface oil and gas associated with the Deepwater Horizon-Macondo oil spill, observations were made on June 24 and 25, 2010 using vessel-mounted calibrated single-beam echo sounders on the National Oceanic and Atmospheric Administration ship Thomas Jefferson. Coincident with visual observations of oil at the sea surface, the 200-kHz echo sounder showed anomalously high-volume scattering strength in the upper 200 m on the western side of the wellhead, more than 100 times higher than the surrounding waters at 1,800-m distance from the wellhead, …

Circulation Of The Western Antarctic Peninsula: Implications For Biological Production, Maria Andrea Piñones Valenzuela

OES Theses and Dissertations

The western Antarctic Peninsula (wAP) continental shelf is characterized by large persistent populations of Antarctic krill ( Enphausia superba) and by regions of enhanced concentrations of marine mammals and other predators (hot spots). This study focused on understanding the role of ocean circulation in providing retention/connectivity of wAP Antarctic krill populations and in maintaining biological hot spot regions. Numerical Lagrangian particle tracking simulations obtained from the Regional Ocean Modeling System (ROMS) configured for the wAP region provided quantitative estimates of retention, immigration and emigration from the wAP continental shelf. Additional simulations with a one-dimensional temperature-dependent growth model for krill …

Quantification Of Nitrate Sources And Sinks Using A Water Quality Network In Morro Bay Estuary, California, Johanna Nadia Jean Weston

Master's Theses

Using an instrumented water quality network in Morro Bay Estuary, California from 2007 to 2010 (15 min sampling frequency), this study addressed the two objectives of constructing a nitrate budget and assessing the influence of sampling frequency on water quality parameters. These two objectives led to the submission of an original report of research (Appendix A) and a note (Appendix B) to peer-reviewed journals.

The first objective was to characterize the high spatial and temporal variation in physical parameters and nitrate concentrations and to construct a nitrate budget quantifying sources and sinks of nitrate from the ocean, streams, and groundwater, …