Oceanography Commons^™

A Statistical Fetch Model For Water Wave Glint Correction Using Worldview-3 Imagery, Amanda Jade Quintanilla

Theses and Dissertations

Sun glint in satellite imagery of the water surface contaminates the upwelling signal received by a detector. Many models exist that attempt to correct for this wave facet effect and phenomena. In this work a model for sun glint correction is created using the comparison of image transects between two nearly simultaneously collected images of the same area, although with differing sensor geometry. One image utilized in this research is almost entirely glint free while the other is contaminated by water wave facet glint. Although many models for removing sun glint exist based on various techniques, none are completely accurate, …

A Computational Profile Of Invasive Lionfish In Belize: A New Insight On A Destructive Species, Joshua E. Balan

The Journal of Purdue Undergraduate Research

Since their discovery in the region in 2009, invasive Indonesian-native lionfish have been taking over the Belize Barrier Reef. As a result, populations of local species have dwindled as they are either eaten or outcompeted by the invaders. This has led to devastating losses ecologically and economically; massive industries in the local nations, such as fisheries and tourism, have suffered greatly. Attempting to combat this, local organizations, from nonprofits to ecotourism companies, have been manually spear-hunting them on scuba dives to cull the population. One such company, Reef Conservation Institute (ReefCI), operating out of Tom Owens Caye outside of Placencia, …

Ecological Assessment Of Drainage Water Input On The Water Quality Of A Coastal Estuary, Mediterranean Coast Of Egypt, Fatma A. Zaghloul, Hoda A. E. Hemaida, Hayat M. Faragallah, Ahmed A. Radwan

Blue Economy

El Mex Bay, located west of Alexandria City, is identified as a hot spot of pollution along the Mediterranean coast of Egypt. It is a large, shallow, and turbid water body of socioeconomic importance. However, El Mex Bay receives a large amount of untreated industrial wastewater, as well as agricultural runoff from different land-based sources.

A comprehensive environmental study was carried out seasonally during 2020-2021. To evaluate the effect of this discharged wastewater on the water quality of El Mex Bay.

The physicochemical parameters were measured at both the surface and near-bottom water at nine stations.

Principal component analysis indicated …

A Comparison Of Adenosine Triphosphate With Other Metrics Of Microbial Biomass In A Gradient From The North Atlantic To The Chesapeake Bay, Alexander B. Bochdansky, Amber A. Beecher, Joshua R. Calderon, Alison N. Stouffer, Nyjaee N. Washington

OES Faculty Publications

A new, simplified protocol for determining particulate adenosine triphosphate (ATP) levels allows for the assessment of microbial biomass distribution in aquatic systems at a high temporal and spatial resolution. A comparison of ATP data with related variables, such as particulate carbon, nitrogen, chlorophyll, and turbidity in pelagic samples, yielded significant and strong correlations in a gradient from the tributaries of the Chesapeake Bay (sigma-t = 8) to the open North Atlantic (sigma-t = 29). Correlations varied between ATP and biomass depending on the microscopic method employed. Despite the much greater effort involved, biomass determined by microscopy correlated poorly with other …

Complex Dynamics Of Coral Gene Expression Responses To Low Ph Across Species, Veronica Z. Radice, Ana Martinez, Adina Paytan, Donald C. Potts, Daniel J. Barshis

Biological Sciences Faculty Publications

Coral capacity to tolerate low pH affects coral community composition and, ultimately, reef ecosystem function. Low pH submarine discharges (‘Ojo’; Yucatán, México) represent a natural laboratory to study plasticity and acclimatization to low pH in relation to ocean acidification. A previous >2‐year coral transplant experiment to ambient and low pH common garden sites revealed differential survivorship across species and sites, providing a framework to compare mechanistic responses to differential pH exposures. Here, we examined gene expression responses of transplants of three species of reef‐building corals (Porites astreoides, Porites porites and Siderastrea siderea) and their algal endosymbiont communities …

Delayed Coastal Inundations Caused By Ocean Dynamics Post-Hurricane Matthew, Kyungmin Park, Emanuele Di Lorenzo, Yinglong J. Zhang, Tal Ezer, Fei Yi

CCPO Publications

Post Hurricane Abnormal Water Level (PHAWL) poses a persistent inundation threat to coastal communities, yet unresolved knowledge gaps exist regarding its spatiotemporal impacts and causal mechanisms. Using a high-resolution coastal model with a set of observations, we find that the PHAWLs are up to 50 cm higher than the normal water levels for several weeks and cause delayed inundations around residential areas of the U.S. Southeast Coast (USSC). Numerical experiments reveal that while atmospheric forcing modulates the coastal PHAWLs, ocean dynamics primarily driven by the Gulf Stream control the mean component and duration of the shelf-scale PHAWLs. Because of the …

A Preliminary Study On Floating Flexible Otec Cold Water Pipe, Nai Kuang Liang, Hai Kuan Peng

Journal of Marine Science and Technology

Ocean Thermal Energy Conversion (OTEC) requires a large amount of cold seawater. The traditional rigid pipe, semi-rigidly fixed onto the ship bottom is not easy to install and disassemble, so the Floating Flexible Cold Water Pipe (FFCWP) flexibly connected to the ship is proposed. A small FFCWP was designed, fabricated, and successfully installed and recovered in the sea. The flexible pipe adopts commercially available fire ventilation snake pipe. The pipe wall material strength must be improved in the future. Assuming that the drag coefficient Cd value is 1.5, a numerical calculation is employed to simulate the FFCWP attitude from the …

Machine Learning With Multi-Source Data To Predict And Explain Marine Pilot Occupational Accidents, Gokhan Camliyurt, Youngsoo Park, Daewon Kim, Won Sik Kang, Sangwon Park

Journal of Marine Science and Technology

Marine pilot occupational accidents during transfer to/from ships are the primary concern of the International Marine Pilots’ Association (IMPA) and industry professionals. There are multiple transfer methods for marine pilots, with the most common being the pilot boat. To reach the mother ship bridge, the following stages must be safely completed: car transfer, walking on the pier, pier to pilot boat, pilot transfer by boat, cutter to pilot ladder, mother ship freeboard climbing, and ship deck to the bridge. Each stage has its own risk. Previous accident records and expert opinions are commonly used to conduct a risk analysis and …

Evaluation Of Operational Performance Of Wusongkou Cruise Port Through Network Data Envelopment Analysis, Qian-Feng Wang, Guo-Ya Gan, Xin-Liang Ye, Hsuan-Shih Lee

Journal of Marine Science and Technology

As major hubs for cruise berthing and passenger transfers, cruise ports in China were developing rapidly in the years before the COVID-19 pandemic because of an ever-growing regional market. Wusongkou Cruise Port is the most important port for cruise ships in China, and this study evaluated the operational performance of this port during 2011–2020. To this end, two-stage network data envelopment analysis was conducted to evaluate the port’s operation performance; subsequently, the change trajectory of the port’s operational efficiency during 2011–2020 was determined, and the potential reasons for the identified changes are discussed. Finally, suggestions for improving the operational performance …

Computational Fluid Dynamics Modeling Of Internal Wave Interactions On Conch Reef, Florida Keys, Megan Miller

All HCAS Student Capstones, Theses, and Dissertations

Internal waves breaking on continental shelves play a significant role in mixing and nutrient delivery to coral reef ecosystems. As internal solitary waves, or solitons, propagate shoreward onto continental slopes, they can become unstable and break into turbulent bores that bring cool, nutrient-rich sub-thermocline water shoreward onto coral reefs. The propagation of turbulent bores generated by internal waves interacting with a complex surface creates high-frequency variabilities in the thermal and nutrient environment of Conch Reef in the Florida Keys, which has been studied previously. Here, I have created a three-dimensional model using ANSYS Fluent Computational Fluid Dynamics (CFD) software to …

Biophysical Factors Affecting Habitat Suitability For Crassostrea Virginica, Jason D. Tilley

Dissertations

Oyster reefs provide a variety of important ecosystem services. However, the mortality rate of eastern oyster, Crassostrea virginica, the dominant species that produces oyster reefs in the northern Gulf of Mexico, is increasing at an alarming rate due to a variety of abiotic and biological factors. I examined how biophysical factors, including the less-studied fatty acid profiles of the suspended particulate matter on which oysters feed, influenced morphometric condition of C. virginica.

I sampled suspended particulate matter (SPM) and oysters in-situ in the western Mississippi Sound, which historically supported the majority of oyster production in Mississippi waters. Sampling …

Investigating The Effects Of A Southward Flow In The Southeastern Florida Shelf Using Robotic Instruments, Alfredo Quezada

All HCAS Student Capstones, Theses, and Dissertations

We deployed a Slocum G3 glider fitted with an acoustic Doppler current profiler (ADCP), a Conductivity-Temperature-Depth sensor (CTD), optics sensor channels, and a propeller on the Southeastern Florida shelf. The ADCP and CTD provide continuous measurements of Northern and Eastern current velocity components, salinity, temperature, and density, throughout the water column in a high-current environment. The optics sensor channels are able to provide measurements of chlorophyll concentrations, colored dissolved organic matter (CDOM), and backscatter particle counts. Additionally, for one of the glider deployments, we deployed a Wirewalker wave-powered profiling platform system also fitted with an ADCP and a CTD in …

Prevalence, Faunal Composition, And Vertical Distribution Of Bioluminescence In The Pelagic Gulf Of Mexico: Fishes, Crustaceans, Cephalopods And Gelatinous Megaplankton, Devynne M. Brown

All HCAS Student Capstones, Theses, and Dissertations

Bioluminescence is the phenomenon of light emission by living organisms. It occurs through a chemical reaction within an organism and serves various purposes. The diversity of bioluminescent capabilities and occurrence in unrelated taxa suggest that bioluminescence has evolved independently numerous times amongst taxa thriving in certain environments. One such environment is the deep ocean, where little to no sunlight penetrates the water column, specifically in the mesopelagic (200-1000 m depth) and bathypelagic (> 1000 m) zones. The mesopelagic and bathypelagic zones have been extensively sampled and well documented in the Gulf of Mexico (GoM), one of the few places globally …

Interactions Between Sediment Mechanical Structure And Infaunal Community Structure Following Physical Disturbance, William Cyrus Roger Clemo

Theses and Dissertations

Shallow, river-influenced coastal sediments are important for global carbon storage and nutrient cycling and provide a habitat for diverse communities of invertebrates (infauna). Elevated bed shear stress from extreme storms can resuspend, transport, and deposit sediments, disrupting the cohesive structure of muds, and sorting and depositing sand eroded from beaches. These physical disruptions can also resuspend or smother infauna, decreasing abundances and changing community structure. Infaunal activities such as burrowing, tube construction, and feeding can impact sediment structure and stability. However, little is known about how physical disturbance impacts short and long-term sediment habitat suitability and whether disturbance-tolerant infauna influence …

State Of The Fisheries: Status Reports And Aquatic Resources Of Western Australia 2022/23, S.J. Newman, K.G. Santoro, D.J. Gaughan

Status reports of the fisheries and aquatic resources

Aquatic resources within Western Australia (WA) are in good condition, and this has positioned WA as a global leader in sustainable fisheries management. The sustainable fisheries of WA continue to support our strong economy and regional communities. Nonetheless, the lack of a consistent approach to build in the knowledge of Traditional Owners remains a gap in our longer term fisheries science in Western Australia.

Climate change and climate variability continues to impact fish stocks, challenging our ability to effectively monitor, assess, and manage fish stocks. We are continually working with our stakeholders, and the broader community to be adaptive, responsive, …

Wavelet Compression As An Observational Operator In Data Assimilation Systems For Sea Surface Temperature, Bradley J. Sciacca

University of New Orleans Theses and Dissertations

The ocean remains severely under-observed, in part due to its sheer size. Containing nearly billion of water with most of the subsurface being invisible because water is extremely difficult to penetrate using electromagnetic radiation, as is typically used by satellite measuring instruments. For this reason, most observations of the ocean have very low spatial-temporal coverage to get a broad capture of the ocean’s features. However, recent “dense but patchy” data have increased the availability of high-resolution – low spatial coverage observations. These novel data sets have motivated research into multi-scale data assimilation methods. Here, we demonstrate a new assimilation approach …

Measuring The Lengths Of Sperm Whales Of The Northern Gulf Of Mexico By Wavelet Analysis Of Their Usual Clicks, George Drouant

University of New Orleans Theses and Dissertations

Abstract

Acoustic recordings of underwater sounds produced by marine mammals present an attractive alternative to costly and logistically complex ship based visual surveys for collecting population data for various species.

The first reported use of underwater acoustic recordings in the long-term monitoring of sperm whale populations was by Ackleh et al. (Ackleh et al., 2012). The paper describes counting sperm whale clicks at different locations to track population changes over time.

Analysis of sperm whale clicks offers additional insight into sperm whale populations. The echo location clicks (usual clicks) of sperm whales can be used to give an estimate of …

The Surprising Oceanography Of The Gulf Of Maine, Nicholas R. Record, Benjamin Tupper, Johnathan Evanilla, Kyle Oliveira, Camille Ross, Logan Ngai, Karen Stamieszkin

Maine Policy Review

The oceanography of the Gulf of Maine has changed in ways that have not been seen previously but that are likely to be more common in the future–changes like extreme rapid warming and declines in primary productivity. The changing oceanography has underpinned surprising losses in commercial stocks and endangered species. Because of the rapid rate of change, some have viewed the Gulf of Maine as a window into the ocean’s future, with the idea that lessons learned can be applied in places that have yet to experience similar rapid changes. We can examine the dynamics, origin, and implications of surprising …

The Changing Tides Of Action To Address Ocean Acidification In Maine, Ivy L. Frignoca, Heather R. Kenyon

Maine Policy Review

As carbon dioxide emissions continue to rise worldwide, ocean acidification has become a consequence that threatens both human and natural processes. On a global scale, ocean acidification is relatively well understood. However, the complex ecosystem of the nearshore environment presents challenges for monitoring and addressing ocean acidification. In a state such as Maine, whose communities heavily depend on the health of the coastal environment, understanding this threat becomes critically important.

In 2014, Maine’s legislature established a six month study commission to investigate this problem and produce recommendations. The commission proposed a coast-wide monitoring network that could identify and use a …

The Relationship Between Biofouling Adhesion And Frequency Of Mechanical Cleaning To Control The Recruitment To Clear Coatings, Dylan Thomas Eggers

Theses and Dissertations

There is a need to control biofouling on sensors and transparent windows in the marine environment. Clear silicone coatings offer a method to reduce the adhesion strength of marine organisms to the surface, however, these also require mechanical cleaning to maintain the surfaces free of fouling. This research evaluated the performance of eighty seven formulations and took the top two candidates to investigate a) the frequencies of wiping required by a brush to maintain two coatings and uncoated glass surfaces free of fouling and b) the effects of clear silicone coatings fouling release properties on required frequencies. The panels were …