Biotechnology Commons^™

Dna Uptake By Type Iv Filaments, Kurt H. Piepenbrink

Department of Biochemistry: Faculty Publications

Bacterial uptake of DNA through type IV filaments is an essential component of natural competence in numerous gram-positive and gram-negative species. Recent advances in the field have broadened our understanding of the structures used to take up extracellular DNA. Here, we review seminal experiments in the literature describing DNA binding by type IV pili, competence pili and the flp pili of Micrococcus luteus; collectively referred to here as type IV filaments. We compare the current state of the field on mechanisms of DNA uptake for these three appendage systems and describe the current mechanistic understanding of both DNA-binding and …

Student Understanding Of Dna Structure–Function Relationships Improves From Using 3d Learning Modules With Dynamic 3d Printed Models, Michelle E. Howell, Christine S. Booth, Sharmin M. Sikich, Tomáš Helikar, Rebecca Roston, Brain A. Couch, Karin Van Dijk

Department of Biochemistry: Faculty Publications

Understanding the relationship between molecular structure and function represents an important goal of undergraduate life sciences. Although evidence suggests that handling physical models supports gains in student understanding of structure–function relationships, such models have not been widely implemented in biochemistry classrooms. Three-dimensional (3D) printing represents an emerging cost-effective means of producing molecular models to help students investigate structure–function concepts. We developed three interactive learning modules with dynamic 3D printed models to help biochemistry students visualize biomolecular structures and address particular misconceptions. These modules targeted specific learning objectives related to DNA and RNA structure, transcription factor-DNA interactions, and DNA supercoiling dynamics. …

Winter Hardiness Of Miscanthus (Iii): Genome‐Wide Association And Genomic Prediction For Overwintering Ability In Miscanthus Sinensis, Hongxu Dong, Lindsay V. Clark, Alexander E. Lipka, Joe E. Brummer, Katarzyna Glowacka, Megan C. Hall, Kweon Heo, Xiaoli Jin, Junhua Peng, Toshihiko Yamada, Bimal Kumar Ghimire, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, Erik J. Sacks

Department of Biochemistry: Faculty Publications

Overwintering ability is an important selection criterion for Miscanthus breeding in temperate regions. Insufficient overwintering ability of the currently leading Miscanthus biomass cultivar, M. ×giganteus (M×g) ‘1993–1780’, in regions where average annual minimum temperatures are −26.1°C (USDA hardiness zone 5) or lower poses a pressing need to develop new cultivars with superior cold tolerance. To facilitate breeding of Miscanthus, this study characterized phenotypic and genetic variation of overwintering ability in an M. sinensis germplasm panel consisting of 564 accessions, evaluated in field trials at three locations in North America and two in Asia. Genome‐wide association (GWA) and genomic …

Chronic Alcohol Exposure Alters Circulating Insulin And Ghrelin Levels: Role Of Ghrelin In Hepatic Steatosis, Karuna Rasineni, Paul G. Thomes, Jacy L. Kubik, Edward N. Harris, Kusum K. Kharbanda, Carol A. Casey

Department of Biochemistry: Faculty Publications

Fatty liver is the earliest response of the liver to excessive ethanol consumption. Central in the development of alcoholic steatosis is increased mobilization of nonesterified free fatty acids (NEFAs) to the liver from the adipose tissue. In this study, we hypothesized that ethanol-induced increase in ghrelin by impairing insulin secretion, could be responsible for the altered lipid metabolism observed in adipose and liver tissue. Male Wistar rats were fed for 5–8 wk with control or ethanol Lieber-DeCarli diet, followed by biochemical analyses in serum and liver tissues. In addition, in vitro studies were conducted on pancreatic islets isolated from experimental …

The Mitochondrial Nad+ Transporter (Ndt1) Plays Important Roles In Cellular Nad+ Homeostasis In Arabidopsis Thaliana, Izabel De Souza Chaves, Elias Feitosa-Araujo, Alexandra Florian, David B. Medeiros, Paula Da Fonseca-Pereira, Lennart Charton, Elmien Heyneke, Jorge A. C. Apfata, Marcel V. Pires, Tabea Mettler-Altmann, Wagner L. Arajuo, H. Ekkehard Neuhaus, Ferdinando Palmieri, Toshihiro Obata, Andreas P. M. Weber, Nicole Linka, Alisdair R. Femie, Adriano Nunes-Nesi

Department of Biochemistry: Faculty Publications

Nicotinamide adenine dinucleotide (NAD⁺) is an essential coenzyme required for all living organisms. In eukaryotic cells, the final step of NAD⁺ biosynthesis is exclusively cytosolic. Hence, NAD⁺ must be imported into organelles to support their metabolic functions. Three NAD⁺ transporters belonging to the mitochondrial carrier family (MCF) have been biochemically characterized in plants. AtNDT1 (At2g47490), focus of the current study, AtNDT2 (At1g25380), targeted to the inner mitochondrial membrane, and AtPXN (At2g39970), located in the peroxisomal membrane. Although AtNDT1 was presumed to reside in the chloroplast …

Acyltransferases And Methods Of Using, Edgar Cahoon, Umidjon Iskandarov, Hae Jin Kim, Jillian Collins-Silva

Department of Biochemistry: Faculty Publications

Provided herein are novel acyltransferases and methods of using such novel acyltransferases in making medium - chain fatty acids.

Charting A New Frontier Of Science By Integrating Mathematical Modeling To Understand And Predict Complex Biological Systems, Katharine White, Kira Mcentire, Nicole R. Buan, Kingshuk Ghosh, Lecia Robinson, Elisar Barbar

Department of Biochemistry: Faculty Publications

Biological systems are staggeringly complex. To untangle this complexity and make predictions about biological systems is a continuous goal of biological research. One approach to achieve these goals is to emphasize the use of quantitative measures of biological processes. Advances in quantitative biology data collection and analysis across scales (molecular, cellular, organismal, ecological) has transformed how we understand, categorize, and predict complex biological systems. Simultaneously, thanks to increased computational power, mathematicians, engineers and physical scientists -- collectively termed theoreticians -- have developed sophisticated models of biological systems at different scales. But there is still a disconnect between the two fields. …

Fatty Acid Transporter 2 Reprograms Neutrophils In Cancer, Filippo Veglia, Vladimir A. Tyurin, Maria Blasi, Alessandra De Leo, Andrew Kossenkov, Laxminarasimha Donthireddy, To Tsun Ki Jerrick, Zach Schug, Subhasree Basu, Fang Wang, Emanuela Ricciotti, Concetta C. Dirusso, Maureen E. Murphy, Robert H. Vonderheide, Paul M. Lieberman, Charles Mulligan, Brian Nam, Neil Hockstein, Gregory Masters, Michael Guarino, Cindy Lin, Yulia Nefedova, Paul N. Black, Valerian E, Kagan, Dmitry Gabrilovich

Department of Biochemistry: Faculty Publications

Polymorphonuclear myeloid derived suppressor cells (PMN-MDSC) are pathologically activated neutrophils that are critically important for the regulation of immune responses in cancer. They contribute to the failure of cancer therapies and are associated with poor clinical outcomes. Despite the recent advances in understanding of the PMN-MDSC biology, the mechanisms responsible for pathological activation of neutrophils are not well defined, which limits selective targeting of these cells. Here, we report that mouse and human PMN-MDSC exclusively up-regulate fatty acid transporter protein 2 (FATP2). Over-expression of FATP2 in PMN-MDSC was controlled by GM-CSF, through the activation of STAT5 transcription factor. Deletion of …

Arsenite Exposure Suppresses Adipogenesis, Mitochondrial Biogenesis And Thermogenesis Via Autophagy Inhibition In Brown Adipose Tissue, Jiyoung Bae, Yura Jang, Heejeong Kim, Kalika Mahato, Cameron Schaecher, Issac M. Kim, Eunju Kim, Seung-Hyun Ro

Department of Biochemistry: Faculty Publications

Arsenite, a trivalent form of arsenic, is an element that occurs naturally in the environment. Humans are exposed to high dose of arsenite through consuming arsenite-contaminated drinking water and food, and the arsenite can accumulate in the human tissues. Arsenite induces oxidative stress, which is linked to metabolic disorders such as obesity and diabetes. Brown adipocytes dissipating energy as heat have emerging roles for obesity treatment and prevention. therefore, understanding the pathophysiological role of brown adipocytes can provide effective strategies delineating the link between arsenite exposure and metabolic disorders. Our study revealed that arsenite significantly reduced differentiation of murine brown …

The Structure Of Pila From Acinetobacter Baumannii Ab5075 Suggests A Mechanism For Functional Specialization In Acinetobacter Type Iv Pili, Leslie A. Ronish, Erik Lillehoj, James K. Fields, Eric J. Sundberg, Kurt Piepenbrink

Department of Biochemistry: Faculty Publications

Type IV pili (T4P) are bacterial appendages composed of protein subunits, called pilins, noncovalently assembled into helical fibers. T4P are essential, in many bacterial species, for processes as diverse as twitching motility, natural competence, biofilm or microcolony formation, and host cell adhesion. The genes encoding type IV pili are found universally in the Gram-negative, aerobic, nonflagellated, and pathogenic coccobacillus Acinetobacter baumannii, but there is considerable variation in PilA, the major protein subunit, both in amino acid sequence and in glycosylation patterns. Here we report the X-ray crystal structure of PilA from AB5075, a recently characterized, highly virulent isolate, at …

The Small Rna Teg41 Regulates Expression Of The Alpha Phenol-Soluble Modulins And Is Required For Virulence In Staphylococcus Aureus, Rachel L. Zapf, Richard E. Wiemels, Rebecca A. Keogh, Donald L. Holzschu, Kayla M. Howell, Emily Trzeciak, Andrew R. Caillet, Kellie A. King, Samantha A. Selhorst, Michael J. Naldrett, Jeffrey L. Bose, Ronan K. Carroll

Nebraska Center for Biotechnology: Faculty and Staff Publications

Small RNAs (sRNAs) remain an understudied class of regulatory molecules in bacteria in general and in Gram-positive bacteria in particular. In the major human pathogen Staphylococcus aureus, hundreds of sRNAs have been identified; however, only a few have been characterized in detail. In this study, we investigate the role of the sRNA Teg41 in S. aureus virulence. We demonstrate that Teg41, an sRNA divergently transcribed from the locus that encodes the cytolytic alpha phenolsoluble modulin (αPSM) peptides, plays a critical role in αPSM production. Overproduction of Teg41 leads to an increase in αPSM levels and a corresponding increase in …

Delineating The Role Of Fanca In Glucose-Stimulated Insulin Secretion In Β Cells Through Its Protein Interactome, Dragana Lagundzin, Wen-Feng Hu, Henry C. H. Law, Kimiko L. Krieger, Fangfang Qiao, Emalie J. Clement, Andjela T. Drincic, Olgica Nedic, Michael J. Naldrett, Sophie Alvarez, Nicholas T. Woods

Nebraska Center for Biotechnology: Faculty and Staff Publications

Hyperinsulinemia affects 72% of Fanconi anemia (FA) patients and an additional 25% experience lowered glucose tolerance or frank diabetes. The underlying molecular mechanisms contributing to the dysfunction of FA pancreas β cells is unknown. Therefore, we sought to evaluate the functional role of FANCA, the most commonly mutated gene in FA, in glucosestimulated insulin secretion (GSIS). This study reveals that FANCA or FANCB knockdown impairs GSIS in human pancreas β cell line EndoC-βH3. To identify potential pathways by which FANCA might regulate GSIS, we employed a proteomics approach to identify FANCA protein interactions in EndoC-βH3 differentially regulated in response to …

Field Evaluation Of Tobacco Engineered For High Leaf-Oil Accumulation, James Perry

Theses and Dissertations--Plant and Soil Sciences

The biofuel market is dominated by ethanol and biodiesel derived from cellulosic and lipid-based biomass crops. This is largely due to the relatively low costs and reliability of production. At present, production of non-food plant-derived oils for biofuel production in the U.S. is minimal. A research team from the Commonwealth Scientific and Industrial Research Organization (CSIRO), an independent Australian federal government research institution, has developed an efficient transgenic system to engineer oil production in tobacco leaves. This novel system is comprised of multiple transgenes that direct the endogenous metabolic flux of oil precursors towards triacylglycerol (TAG) production. Additional genes were …

Nanomaterials For Double-Stranded Rna Delivery, Stuart Lichtenberg

Theses and Dissertations--Plant and Soil Sciences

RNA interference has enormous potential as a potent, specific, and environmentally friendly alternative to small molecule pesticides for crop protection. The use of exogenous double-stranded RNA offers flexibility in targeting and use in crops in which transgenic manipulation is not an option. The combination of RNAi with nanotechnology offers further advantages that are not available with dsRNA alone. In this work, I have evaluated several different combinations of nanomaterials and polymers for use in RNAi-based pest control systems. First, I have characterized the use of chitosan/dsRNA polyplex nanoparticles for gene knockdown using the model nematode Caenorhabditis elegans. Though chitosan/dsRNA …

Mechanisms Of Microglia Mediated Apolipoprotien E Neurotoxicity, Pardeep Singh

Dissertations and Theses

No abstract provided.

Detection Of Sickle Cell Disease-Associated Single Nucleotide Polymorphism Using A Graphene Field Effect Transistor, Kandace Fung

CMC Senior Theses

Sickle Cell Disease (SCD) is a hereditary monogenic disorder that affects millions of people worldwide and is associated with symptoms such as stroke, lethargy, chronic anemia, and increased mortality. SCD can be quickly detected and diagnosed using a simple blood test as an infant, but as of now, there is currently limited treatment to cure an individual of sickle cell disease. Recently, there have been several promising developments in CRISPR-Cas-associated gene-editing therapeutics; however, there have been limitations in gene-editing efficiency monitoring, which if improved, could be beneficial to advancing CRISPR-based therapy, especially in SCD. The CRISPR-Chip, a three-terminal graphene-based field …

Determining Differential Effects Of Interleukin-2 On Innate And Adaptive Immune Cells In Lymphoid Organs And The Gastrointestinal Tract, Ayushi Singh

Electronic Theses and Dissertations

Interleukin-2 (IL-2) is a pleiotropic cytokine demonstrated to be effective in treating cancer. However, the clinical use of IL-2 can be associated with severe side effects including gastrointestinal toxicity (GT). Similar GT symptoms are observed in inflammatory diseases such as CD (CD). Interestingly mounting evidence indicates a role for IL-2 in CD, but the underlying mechanisms are unknown. Indeed, studies on the in-vivo activities of IL-2 have mostly focused on secondary lymphoid organs and immune cells associated with them. Very few studies have addressed how IL-2 signals impact populations of immune cells in the gut. Here, we aim to identify …

Atp Induced Molecular Disassembly Of Cytolethal Distending Toxin's B/C Heterodimer, George Huhn

Electronic Theses and Dissertations

Cytolethal distending toxin (CDT) is a virulence factor produced by many Gram-negative bacteria, including Haemophilus ducreyi. This fastidious pathogen is the causative agent of genital cancroid. CDT is a heterotrimeric toxin with an AB2 structure consisting of a cell-binding "B" domain (CdtA + CdtC) and a catalytic "A" domain (CdtB) that has DNase activity. This toxin assembles in the bacterial periplasm that lacks ATP and is secreted into the extracellular environment. After cell binding, CDT is internalized by endocytosis and travels through the endosomes and Golgi before arriving in the endoplasmic reticulum (ER). CdtA is lost from the holotoxin before …

Biochemical Characterization Of Rv2633c From Mycobacterium Tuberculosis And The Effects Of Mutagenesis On Iron Binding, Kyle Strickland

Electronic Theses and Dissertations

Mycobacterium tuberculosis (Mtb) is a pathogenic bacterium that is the causative agent of the disease Tuberculosis (TB). TB kills an estimated 1.8 million people annually and roughly one third of the world's population carries Mtb in a dormant state. Drug resistant Mtb strains are on the rise, thus a new method of combating this disease is paramount. Mtb survival inside of macrophages requires overcoming various stressors such as; iron restriction, reactive oxygen species, and hypoxic conditions. Mtb employs the use of catalases, nitric oxide reductase, superoxide dismutase, and siderophores to aid in survival. These functions have also been found in …

Phenogeneranker: A Tool For Gene Prioritization Using Complete Multiplex Heterogeneous Networks, Cagatay Dursun, Naoki Shimoyama, Mary Shimoyama, Michael Schläppi, Serdar Bozdag

Computer Science Faculty Research and Publications

Uncovering genotype-phenotype relationships is a fundamental challenge in genomics. Gene prioritization is an important step for this endeavor to make a short manageable list from a list of thousands of genes coming from high-throughput studies. Network propagation methods are promising and state of the art methods for gene prioritization based on the premise that functionally-related genes tend to be close to each other in the biological networks.

In this study, we present PhenoGeneRanker, an improved version of a recently developed network propagation method called Random Walk with Restart on Multiplex Heterogeneous Networks (RWR-MH). PhenoGeneRanker allows multi-layer gene and disease networks. …

Antioxidant And Antibacterial Agents From Parmotrema Dilatatum (Vainio) Hale, Knema Angustifolia (Roxb.) Warb. And Persicaria Odorata Lour, Asshaima Paramita Devi

Chulalongkorn University Theses and Dissertations (Chula ETD)

In the search of antioxidant and antibacterial agents, the extracts and isolated compounds from lichen Parmotrema dilatatum, Knema angustifolia full name, Persicaria odorata and Mansonia gagei. were examined. Nine compounds were isolated from lichen P. dilatatum including (E)-2,4-dihydroxy-6-methyl-3-(3-oxobut-1-en-1-yl)benzoate (PD.1), hopane-16ß,22-diol (PD.2), methyl orsellinate (PD.3), methyl haemmatomate (PD.4), methyl ß-orcinolcarboxylate (PD.5), 2-hydroxy-4-methoxy-3,6-dimethylbenzoic acid (PD.6), atranol (PD.7), atranorin (PD.8) and lecanorin (PD.9). The dichloromethane and acetone fractions, and atranol (PD.7) gave excellent activities as antioxidants. While in tyrosinase activity the dichloromethane fraction and atranorin (PD.8) showed the highest inhibition. For α-glucosidase inhibition activity, the methanol fraction and methyl haemmatommate (PD.4) revealed the …

Enhancement Of Biofuel Production In Microalgae By Genetic And Physiological Modification, Napisa Pattharaprachayakul

Chulalongkorn University Theses and Dissertations (Chula ETD)

Microalgae are photosynthetic microorganisms, which could be used as potential microbial cell factories by directly converting CO2 into valuable bioproducts and biofuels. This study aims to improve the target biofuel feedstocks from the isolated green alga Chlorella sp. and the engineered cyanobacterium Synechococcus elongatus PCC 7942 in terms of the improvement on lipids (as precursors of FAMEs) and terpene (α-farnesene), respectively. The first part is concerned with the enhancement of lipids and the determination of FAMEs and biodiesel properties in Chlorella sp. under the phosphorus (P) limitation (0-50%) alone or in combination with heavy metals (Fe, Co, Pb) supplementation. The …

Binding Kinetics Of Monoclonal Antibodies And Fluoroquinolone Derivatives, Patamalai Boonserm

Chulalongkorn University Theses and Dissertations (Chula ETD)

Fluoroquinolones (FQs) are a group of antibiotics which have been extensively used against both Gram-negative and Gram-positive bacteria. Some of FQs antibiotics commonly used in livestock and fishery include norfloxacin, enrofloxacin, ciprofloxacin, and ofloxacin. However, misuse of these antibiotics may cause drug residues in food products. Therefore, to prevent consumers from getting residual antibiotics in food and the drug resistance of pathogens in humans. As a result, surveillance detection program of these drug residues must be in practice to ensure safety of the consumers in many countries. In general, detections based on immunological method include enzyme-linked immunosorbent assay (ELISA) has …

Screening And Identification Of Probiotic Lactic Acid Bacteria From Plant Samplesd, Ratthanatda Nuhwa

Chulalongkorn University Theses and Dissertations (Chula ETD)

Seventy lactic acid bacteria (LAB) were isolated from flowers (17 strains), 3 tree barks (7 strains), one fruit (2 strains), ten fermented tea leaves (31 strains) and two silage (13 strains). They were identified as Lactobacillus pentosus (12 strains), L. plantarum subsp. plantarum (9 strains), L. paracasei subsp. tolerans (5 strains), L. brevis (1 strain), L. silagincola (1 strain), L. kunkeei (1 strain), and L. formosensis (1 strain), Enterococcus durans (3 strains), E. lactis (2 strains), E. faecalis (1 strain), E. faecium (1 strain), E. gallinarum (1 strain) and E. gilvus (1 strain), Pediococcus acidilactici (1 strain) and P. pentosaceus …

Development Of Oxidase Enzyme And Non-Enzyme Based Biosensors For Lactate And Creatinine Detection, Siraprapa Boobphahom

Chulalongkorn University Theses and Dissertations (Chula ETD)

This dissertation focused on the development of electrochemical sensors based on metal oxides and graphene modified electrodes for clinical applications, which is divided into two parts. The first part is development of a biosensor based on lactate oxidase (LOx) immobilized on titanium dioxide sol (TiO2 sol)/graphene nanocomposite modified nickel (Ni) foam electrode for enzymatic electrochemical detection of lactate via hydrogen peroxide (H2O2) detection. A TiO2/graphene nanocomposite was simply synthesized by hydrolysis and coated on Ni foam electrode to develop a novel electrode in biosensor. The results showed that the well intercalation of TiO2 sol within graphene film covered on the …

Role Of Enzymes In Glyoxylate Cycle In Transgenic 'Kdml 105' Rice Oryza Sativa L. Overexpressing Oscam1-1 Under Salt Stress, Tanaporn Ausaha

Chulalongkorn University Theses and Dissertations (Chula ETD)

The previous study reported that the transcriptome profiling of the KDML 105 rice overexpressing OsCam1-1 widely affected the expression of genes involved in several cellular processes including the genes associated with the glyoxylate cycle, which exhibited up-regulation in KDML 105 overexpressing OsCam1-1 under salt stress. In this study, we focused on the role of the glyoxylate cycle in transgenic KDML 105 rice under salt stress. The phenotypes as follows: fresh weight and dry weight of shoot & root, SPAD value, activities of isocitrate lyase, and malate synthase; sugar, and starch contents, and total lipid content were investigated at 0, 2, …

การตรวจสอบเอนไซม์ลิงค์อิมมูโนซอร์เบนต์แอสเสย์สำหรับการตรวจวัดสารตกค้างกลุ่มแรคโตพามีนและการประยุกต์, พลอยขวัญ พรหมพิทยายุทธ

Chulalongkorn University Theses and Dissertations (Chula ETD)

แรคโตพามีน (Ractopamine) เป็นสารในกลุ่มเบต้าอะโกนิสต์ (Beta-Agonist) ที่ถูกห้ามใช้ในประเทศไทย ดังนั้นงานวิจัยนี้จึงต้องการที่จะพัฒนาและทดสอบความใช้ได้ของวิธี Enzyme linked immunosorbent assay (ELISA) สำหรับตรวจวัดแรคโตพามีนตกค้างในเนื้อสัตว์ เครื่องในสัตว์และอาหารสัตว์ โดยได้เริ่มจากการพัฒนา ELISA 2 รูปแบบคือ indirect competitive ELISA และ direct competitive ELISA จากการทดสอบได้เลือก ELISA รูปแบบ direct competitive ELISA เนื่องจากมีค่าความไวที่สูงกว่าอีกรูปแบบ ค่า IC50 LOQ และ LOD เท่ากับ 0.57, 0.06 และ 0.02 นาโนกรัมต่อมิลลิลิตรตามลำดับ ทำการทดสอบความใช้ได้ของ direct competitive ELISA สำหรับนำไปตรวจวัดปริมาณแรคโตพามีนตกค้างในตัวอย่างกลุ่มเนื้อสัตว์ (เนื้อหมูและเนื้อโค) กลุ่มเครื่องในสัตว์ (ตับหมู ตับโคและไตหมู) และกลุ่มอาหารสัตว์ (อาหารหมูและอาหารโค) ทดสอบความไวของวิธี ELISA ในสารสกัดตัวอย่างต่างๆ พบว่า LOQ ของตัวอย่างอยู่ในช่วง 0.56-1.90 นาโนกรัมต่อกรัม และค่า LOD ของตัวอย่างอยู่ในช่วง 0.32-0.97 นาโนกรัมต่อกรัม ช่วงของการการตรวจวัดแรคโตพามีนในเนื้อหมูและไตหมูอยู่ที่ 0.4-6.25 นาโนกรัมต่อกรัม ในขณะที่ตัวอย่างอื่น ๆ มีช่วงของการตรวจวัดอยู่ที่ 0.8-12.5 นาโนกรัมต่อกรัม นอกจากนี้ได้ทดสอบการเกิดปฏิกิริยาข้ามพบว่าไม่เกิดปฏิกิริยาข้ามกับสารในกลุ่มเบต้าอะโกนิสต์ ความถูกต้อง (% recovery) และความแม่นยำ (%CV) มีค่าอยู่ในช่วง 64.06-109.80 % และ 6.26-28.87 % ตามลำดับ ค่าความสามารถในการตรวจวัด (CCβ) มีค่าอยู่ที่ 2 นาโนกรัมต่อกรัมสำหรับเนื้อหมูและไตหมู และ 3 นาโนกรัมต่อกรัมในตัวอย่างอื่นๆ โดยมีค่าความผิดพลาดผิดพลาดจากการตรวจวัดน้อยกว่าหรือเท่ากับ 5 % จากผลการทดสอบดังกล่าวพบว่าวิธี direct …

Cyclophilin A As A Molecular Switch Regulating Prolactin Receptor Mediated Signaling, Mammary Tumorigenesis And Metastasis, Shawn Hakim

Theses and Dissertations

Prolactin (PRL) and its receptor (PRLr) have been implicated in the development and progression of human breast cancer. PRL activates its receptor and induces activation of proximal Janus kinase 2 (Jak2) for signal transduction. Here, we sought to determine the role of PRLr-associated peptidyl-prolyl isomerase, cyclophilin A (CypA), in modulating structure/function relationships of the PRLr. It was demonstrated that CypA mediated PRL-induced conformational change of the CFP- and -YFP tagged forms of the PRLr cytoplasmic-tail, whereas CypA inhibition by NIM811 (N-methyl-4-isoleucine cyclosporin) or knockdown blocked the conformational change of the PRLr assessed by Fluorescence Resonance Energy Transfer (FRET) signal or …

Preconditioning Of The Tumor Microenvironment By Means Of Low Dose Chemotherapies For An Effective Immunotherapy Of Breast Cancer, Hussein F. Aqbi

Theses and Dissertations

Breast cancer mortality is mainly due to distant recurrence of the disease arising from dormant tumor cells established by cancer therapies. Patients who initially respond to cancer therapies often succumb to distant recurrence of the disease. It is not clear why people with the same type of breast cancer respond to treatments differently; some escape from dormancy and relapse earlier than others. In addition, some tumor clones respond to immunotherapy while others do not. We investigated how autophagy plays a role in accelerating or delaying recurrence of neu overexpressing mouse mammary carcinoma (MMC) following adriamycin (ADR) treatment, and in affecting …

Looking For Maize Genes Involved In Cold Response: Producing Knockouts For Arabidopsis Homologs Of Maize Candidate Genes Using A Crispr/Cas9 Approach, Katie Hillmann

Departmental Honors Projects

Most of today’s maize is cultivated outside its original climate zone, where yields are constrained by the changes in climate. Maize is especially vulnerable to high temperatures and drought stress, both of which negatively affect corn yields. An important strategy to combat this is early sowing, which avoids the effects of summer droughts and high temperatures in many places around the globe. However, maize is a cold sensitive species (Sanghera et al., 2011), making improvement to cold stress crucial for its adaption. The relatively new system CRISPR (Clustered regularly-interspaced short palindromic repeats)/Cas9 offers the potential to study cold-stress related …