Digital Commons Network^™

Mrna Vaccine Mitigates Sars-Cov-2 Infections And Covid-19, Christina M. Kackos, Sherri L. Surman, Bart G. Jones, Robert E. Sealy, Trushar Jeevan, Christopher J H Davitt, Sergei Pustylnikov, Tamarand L. Darling, Adrianus C M Boon, Julia L. Hurwitz, Marcelo M. Samsa, Richard J. Webby

2020-Current year OA Pubs

The novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), was identified in December of 2019 and is responsible for millions of infections and deaths across the globe. Vaccination against SARS-CoV-2 has proven effective to contain the spread of the virus and reduce disease. The production and distribution of these vaccines occurred at a remarkable pace, largely through the employment of the novel mRNA platform. However, interruptions in supply chain and high demand for clinical grade reagents have impeded the manufacture and distribution of mRNA vaccines at a time when accelerated vaccine deployment is crucial. Furthermore, the emergence of SARS-CoV-2 …

Brain Aerobic Glycolysis And Resilience In Alzheimer Disease, Manu S Goyal, Tyler Blazey, Nicholas V Metcalf, Mark P Mcavoy, Jeremy F Strain, Maryam Rahmani, Tony J Durbin, Chengjie Xiong, Tammie L-S Benzinger, John C Morris, Marcus E Raichle, Andrei G Vlassenko

2020-Current year OA Pubs

The distribution of brain aerobic glycolysis (AG) in normal young adults correlates spatially with amyloid-beta (Aβ) deposition in individuals with symptomatic and preclinical Alzheimer disease (AD). Brain AG decreases with age, but the functional significance of this decrease with regard to the development of AD symptomatology is poorly understood. Using PET measurements of regional blood flow, oxygen consumption, and glucose utilization-from which we derive AG-we find that cognitive impairment is strongly associated with loss of the typical youthful pattern of AG. In contrast, amyloid positivity without cognitive impairment was associated with preservation of youthful brain AG, which was even higher …

Apolipoprotein E4 Has Extensive Conformational Heterogeneity In Lipid-Free And Lipid-Bound Forms, Melissa D Stuchell-Brereton, Maxwell I Zimmerman, Justin J Miller, Upasana L Mallimadugula, J Jeremías Incicco, Debjit Roy, Louis G Smith, Jasmine Cubuk, Berevan Baban, Gregory T Dekoster, Carl Frieden, Gregory R Bowman, Andrea Soranno

2020-Current year OA Pubs

The ε4-allele variant of apolipoprotein E (ApoE4) is the strongest genetic risk factor for Alzheimer's disease, although it only differs from its neutral counterpart ApoE3 by a single amino acid substitution. While ApoE4 influences the formation of plaques and neurofibrillary tangles, the structural determinants of pathogenicity remain undetermined due to limited structural information. Previous studies have led to conflicting models of the C-terminal region positioning with respect to the N-terminal domain across isoforms largely because the data are potentially confounded by the presence of heterogeneous oligomers. Here, we apply a combination of single-molecule spectroscopy and molecular dynamics simulations to construct …

Respiratory Quinone Switches From Menaquinone To Polyketide Quinone During The Development Cycle In Streptomyces Sp. Strain Mnu77, Kritee Mehdiratta, Sonam Nain, Meenakshi Sharma, Shubham Singh, Sonali Srivastava, Bhushan Dilip Dhamale, Debasisa Mohanty, Siddhesh S Kamat, Vivek T Natarajan, Rakesh Sharma, Rajesh S Gokhale

Duncan NRI Faculty and Staff Publications

Type III polyketide synthases (PKSs) found across Streptomyces species are primarily known for synthesis of a vast repertoire of clinically and industrially relevant secondary metabolites. However, our understanding of the functional relevance of these bioactive metabolites in Streptomyces physiology is still limited. Recently, a role of type III PKS harboring gene cluster in producing alternate electron carrier, polyketide quinone (PkQ) was established in a related member of the Actinobacteria, Mycobacteria, highlighting the critical role these secondary metabolites play in primary cellular metabolism of the producer organism. Here, we report the developmental stage-specific transcriptional regulation of homologous type III …

Ambient Oxygen Levels Regulate Intestinal Dysbiosis And Gvhd Severity After Allogeneic Stem Cell Transplantation, Keisuke Seike, Anders Kiledal, Hideaki Fujiwara, Israel Henig, Marina Burgos Da Silva, Marcel R M Van Den Brink, Robert Hein, Matthew Hoostal, Chen Liu, Katherine Oravecz-Wilson, Emma Lauder, Lu Li, Yaping Sun, Thomas M Schmidt, Yatrik M Shah, Robert R Jenq, Gregory Dick, Pavan Reddy

Faculty, Staff and Student Publications

The severity of T cell-mediated gastrointestinal (GI) diseases such as graft-versus-host disease (GVHD) and inflammatory bowel diseases correlates with a decrease in the diversity of the host gut microbiome composition characterized by loss of obligate anaerobic commensals. The mechanisms underpinning these changes in the microbial structure remain unknown. Here, we show in multiple specific pathogen-free (SPF), gnotobiotic, and germ-free murine models of GI GVHD that the initiation of the intestinal damage by the pathogenic T cells altered ambient oxygen levels in the GI tract and caused dysbiosis. The change in oxygen levels contributed to the severity of intestinal pathology in …

Final Butte Priority Soils Operable Unit (Bpsou) 2021 Unreclaimed Sites Sampling – Ur-39 Site Evaluation Summary Report (Dated January 4, 2023), Nikia Greene

Silver Bow Creek/Butte Area Superfund Site

No abstract provided.

Barriers To Using Legally Authorized Representatives In Clinical Research With Older Adults, Jessica Mozersky, Erin D Solomon, Kari Baldwin, Matthew Wroblewski, Meredith Parsons, Melody Goodman, James M Dubois

2020-Current year OA Pubs

BACKGROUND: Older adults are at increased risk of cognitive impairments including Alzheimer's disease dementia. Legally authorized representatives (LARs) can provide informed consent when a participant is no longer able to, but little is known about barriers to incorporating them in research.

OBJECTIVE: Explore reasons for not asking and documenting participant decisions to appoint LARs among researchers conducting clinical intervention trials studying older adults or individuals with cognitive impairments.

METHODS: Mixed method design consisting of a survey (

RESULTS: 37% (

CONCLUSION: Resources and education to increase awareness and knowledge of LARs are needed. Researchers studying older adults should, at minimum, …

Estimated Impact Of Low Isolate Numbers On The Reliability Of Cumulative Antibiogram Data, Christian Tran, John Hargy, Bryan Hess, Matthew Pettengill

Department of Pathology, Anatomy, and Cell Biology Faculty Papers

Antibiograms are cumulative reports of antimicrobial susceptibility results that are used to guide the selection of empirical antibiotic therapy. Although Clinical and Laboratory Standards Institute (CLSI) guidelines recommend including only organisms that have at least 30 isolates in an antibiogram, previous studies demonstrated that adherence to this recommendation is highly variable. This paper aims to model the impact of small sample sizes on expected levels of error in cumulative antibiograms by comparing percent susceptibility results for random samples to those of the larger, entire data set. The results demonstrate relatively high error rates when utilizing low numbers of isolates in …

Self-Renewing Macrophages In Dorsal Root Ganglia Contribute To Promote Nerve Regeneration, Rui Feng, Vishnu Muraleedharan Saraswathy, Mayssa H Mokalled, Valeria Cavalli

2020-Current year OA Pubs

Sensory neurons located in dorsal root ganglia (DRG) convey sensory information from peripheral tissue to the brain. After peripheral nerve injury, sensory neurons switch to a regenerative state to enable axon regeneration and functional recovery. This process is not cell autonomous and requires glial and immune cells. Macrophages in the DRG (DRGMacs) accumulate in response to nerve injury, but their origin and function remain unclear. Here, we mapped the fate and response of DRGMacs to nerve injury using macrophage depletion, fate-mapping, and single-cell transcriptomics. We identified three subtypes of DRGMacs after nerve injury in addition to a small population of …

Big Picture Immunology: Body Size Shapes Immune Strategies, Cynthia Downs

Sustainability Seminar Series

Why are some species susceptible to and capable of transmitting disease-causing pathogens while others are not? Do some species inherently have less effective immune defenses than others? In this presentation, Dr. Downs will explain new research that links the body mass of a species with its capacity to defend against pathogens. Evidence suggests that large and small species experience different disease pressures and physiological constraints leading to the evolution of different immune strategies. This work has implications for understanding disease emergences and dynamics.

Perennial Ryegrass Variety Differences In Nutritive Value Characteristics, T. J. Gilliland, R. E. Agnew, A. M. Fearson, F. E. A. Wilson

IGC Proceedings (1977-2023)

Animal grazing performance at grass is predominately determined by herbage intake rates, with high yielding dairy cows requiring up to 20 kg/d DM within a limited grazing time (Gibb, 1998). Grass nutritional factors such as seasonal patterns in digestibility and water-soluble carbohydrate levels have been linked to animal productivity (Davies et al., 1991), while sward surface height, herbage mass, bulk density and green leaf mass have been shown to promote high grazing intake (Barrett et al., 2001). Furthermore, fatty acid profiles have been shown to improve the unsaturated fatty acid composition of milk, with potential human health benefits …

Management Of Pasture Quality For Sheep On New Zealand Hill Country, D. I. Gray, J. I. Reid, P. D. Kemp, I. M. Brookes, D. Horne, P. R. Kenyon, C. Matthew, S. T. Morris, I. Valentine

IGC Proceedings (1977-2023)

The control of pasture quality over spring is central to the achievement of high levels of sheep performance on hill country. Despite this, with the exception of the work of Lambert et al. (2000), little is known about how farmers actually manage pasture quality. The purpose of this research was to describe how a high performing hill country farmer manages pasture quality on their sheep area over spring and from this develop a framework that will assist other farmers improve their pasture management.

Production And Plant Density Of Sulla Grazed By Sheep At Three Growth Stages, H. Krishna, P. D. Kemp

IGC Proceedings (1977-2023)

Sulla is one of the few temperate forage legumes that contain enough condensed tannins to improve the efficiency with which livestock use protein (Marshall et al., 1979). However, it usually is productive only for approximately 14 months in New Zealand, and little is known of its response to grazing. This paper reports on the production and persistence of Sulla cv. Necton, when using growth stage as the criterion for time of grazing by sheep in a maritime, temperate environment.

Spring Calving Suckler Beef Systems: Influence Of Grassland Management System On Herbage Availability, Utilisation, Quality And Cow And Calf Performance To Weaning, M. J. Drennan, M. Mcgee, S. Kyne, B. O'Neill

IGC Proceedings (1977-2023)

Suckler beef systems in Ireland are primarily based on grass. Suckler systems vary in intensity but many operate low input systems and participate in REPS (Rural Environmental Protection Scheme). As there is a considerable cost associated with second-cut silage this research compared a two-cut system with a simplified low input one-cut system.

The Importance Of Patch Size In Estimating Steady-State Bite Rate In Grazing Cattle, E. D. Ungar, N. Ravid, T. Zada, E. Ben-Moshe, R. Yonatan, S. Brenner, H. Baram, A. Genizi

IGC Proceedings (1977-2023)

Since the pioneering work of Black and Kenney (1984), various intake studies have been conducted at the spatial scale of a single feeding station ("patch") to elucidate the processes that determine instantaneous intake rate (e.g. Laca et al., 1994). While these are well-suited for patch depletion studies, it is less clear how well they represent non-patchy and relatively homogeneous environments (Ungar & Griffiths, 2002). Clearly, grazing should be restricted to the upper grazing horizon (i.e. layer of bites), but sample duration may be insufficient to characterize steady-state behaviour, especially when grazing commences on an empty mouth. We examined the …

Performance Of Meat Goats Grazing Winter Annual Grasses In The Piedmont Of The Southeastern Usa, J-M. Luginbuhl, J. P. Mueller

IGC Proceedings (1977-2023)

In the Southeastern United States, meat goats (Capra hircus hircus) are becoming increasingly important contributors to the income of many small producers. Meat goats perform well in grazing situations if grazing management practices match their grazing behavior. Nevertheless, little research data are available from the region specifically directed toward forage feeding programs for goats reared for meat production. Hart et al. (1993) reported that growing Alpine, Angora and Nubian kids grazed on high quality Triticum aestivum forage gained 50 g/d, whereas Kiesling et al. (1994) reported gains ranging from 65 to 141 g/d in growing Angora …

The Effect Of Early And Delayed Spring Grazing On The Milk Production, Grazing Management And Grass Intake Of Dairy Cows, E. Kennedy, M. O'Donovan, J. P. Murphy, L. Delaby, F. P. O'Mara

IGC Proceedings (1977-2023)

Earlier access to pasture can increase the overall proportion of grazed grass in the diet of the spring calving dairy cow. Further benefits can also be achieved from early turnout, including improved animal production, increased sward utilisation and enhanced sward quality (O’Donovan et al., 2004). The objective of this study was to compare the effect of initial spring grazing date and stocking rate on the performance of spring calving dairy cows.

Intake Characteristics Of Diploid And Tetraploid Perennial Ryegrass Varieties When Grazed By Simmental X Holstein Yearling Heifers Under Rotational Stocking Management, R. J. Orr, J. E. Cook, K. L. Young, R. A. Champion, A. J. Rook

IGC Proceedings (1977-2023)

Orr et al. (2003) measured large differences in dry matter (DM) intake rate between 15 intermediate-heading perennial ryegrass varieties when they were continuously stocked with sheep and subsequently explored the extent to which, for 5 of these varieties, these differences could be explained by chemical and morphological traits (Orr et al., 2004a) which could be targeted in grass breeding programmes. Here, four of the 15 varieties, which within ploidy had low or high intake characteristics when grazed by sheep, were rotationally stocked with cattle and intake and sward factors were measured.

Optimising Financial Return From Grazing In Temperate Pastures, P. Dillon, J. R. Roche, L. Shalloo, B. Horan

IGC Proceedings (1977-2023)

Key Points

1. The increased interest in pasture-based systems of milk production in recent years has been largely generated through lower product prices and rising costs of production.

2. Pasture based systems of milk production decrease unit production costs, through lower feed and labour expenses, and reduced capital investment.

3. Systems utilising grazed pasture will be optimised in regions where pasture production potential is high, variability in seasonal pasture supply and quality is low, manufacturing milk accounts for a large proportion of total production, and where large areas of land are available at relatively low cost.

4. Pasture based systems may allow greater global …

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Challenges And Opportunities For Animal Production From Temperate Pastures, D. A. Clark

IGC Proceedings (1977-2023)

Key points

1. Temperate pastures offer a major opportunity to reduce the feed costs associated with ruminant production.

2. Pastures offer unique opportunities for producing high value components in feedstuffs that are beneficial to human health.

3. The increased use of pasture will not automatically lead to improved environmental outcomes – difficult challenges exist in reducing nitrogen and greenhouse gas pollution.

4. Grazed pasture systems offer advantages in animal welfare, provided management avoids the problems associated with climatic extremes, and the toxins associated with some pastures.

5. To remain competitive with total mixed ration systems, and environmentally acceptable, pastures with higher intake characteristics that allow …

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Decision Support For Temperate Grasslands: Challenges And Pitfalls, J. R. Donnelly, L. Salmon, R. D. H. Cohen, Zl. Liu, Xp. Xin

IGC Proceedings (1977-2023)

Key points

1. Successful adoption of decision support tools (DS tools) to address grassland management issues requires careful attention in design to ensure ease-of-use, accuracy in prediction and the flexibility to simulate actual practices.

2. DS tools must handle spatial variability and where possible include facilities for automatic sourcing of essential information for initialisation.

3. Advances in the development of DS tools will depend on resolution of scientific issues in grassland biology including investment in dedicated experiments to determine parameter values for model equations.

4. The use of mechanistic models, the integration of remote sensing technology and cooperation between research groups to develop modular …

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Modelling Of Herbage Intake And Milk Production By Grazing Dairy Cows, Rémy Delagarde, M. O'Donovan

IGC Proceedings (1977-2023)

Key-points

1. Models predicting intake and performance of grazing ruminants from animal, sward, grazing and supplements characteristics are rare, but they are now included in several decision support systems (DSS).

2. An evaluation of the performance and accuracy of published models are rarely undertaken by their authors, but this is proposed in this paper.

3. There is still a need for experimental research but also for the development of generic and dynamic models to predict intake and performance over a wide range of grazing conditions.

Grass Growth Modelling: To Increase Understanding And Aid Decision Making On-Farm, P. D. Barrett, A. S. Laidlaw

IGC Proceedings (1977-2023)

Key points

1. Crop and grass growth models have been developed over the last 50 years, or so, but general appreciation of their benefits and potential has been recognised only relatively recently. The most popular application of grass growth models has traditionally been for knowledge understanding.

2. There is growing awareness of the potential of models in decision support systems (DSS) applications to aid pasture management and grassland budgeting on dairy farms.

3. Although some models have been developed for DSS, their widespread uptake in industry has been slow; challenges still exist which need to be addressed in order to improve their precision …

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Genetic Characteristics Required In Dairy And Beef Cattle For Temperate Grazing Systems, F. Buckley, C. Holmes, M. G. Keane

IGC Proceedings (1977-2023)

Key points

1. Only about 10% of the world’s milk is produced from grazing systems. Consequently the majority of dairy cattle have not been selected under grazing, nor on seasonal systems. This is not true for beef cattle, for which the majority, especially the dams, are managed under seasonal grazing systems.

2. In grazing systems daily feed intake is limited to lower levels than are achievable on concentrate plus conserved forage rations. Consequently, cows most suited to grazing environments are likely to have a lower genetic potential for milk production than cows selected in high concentrate systems, to minimise their relative energy …

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A 180 On Section 230: State Efforts To Erode Social Media Immunity, Leslie Y. Garfield Tenzer, Hayley Margulis

Pepperdine Law Review

The turmoil of the 2020 presidential election renewed controversy surrounding 47 U.S.C § 230. The law, adopted as part of the 1996 Communications Decency Act (CDA), shields Interactive Computer Services (ICS) from civil liability for third-party material posted on their Platforms—no matter how heinous and regardless of whether the material enjoys constitutional protection. Consequently, any ICS, which is broadly defined to include Internet service providers (ISPs) and social media platforms (Platforms), can police its own postings but remains free from government intervention or retribution. In 2022, members of the Texas and Florida legislatures passed laws aiming to limit the scope …

National Apology Day, Kimberley Stolen Generation

Nulungu Community Events

No abstract provided.

New Insights Into The Nutritional Value Of Grass, D. H. Rearte

IGC Proceedings (1977-2023)

Key points

1. The rumen environment in cattle grazing high quality forage is different to that reported for cattle fed indoors with diets based on processed feedstuffs.
2. Temperate pasture is an excellent source of nutrients for ruminants but a high energy:protein imbalance can occur when it is offered at the stage of optimal digestion.
3. Beef and milk produced on grass in temperate regions have a composition with nutritional advantages over beef or milk produced in indoor systems based on concentrate.
4. Increasing water soluble carbohydrate content of grasses would diminish environmental contamination by reducing the excretion of urea through the urine.
5. Increasing …

Plant And Sward Characteristics To Achieve High Intake In Ruminants, W. J. Wales, C. R. Stockdale, P. T. Doyle

IGC Proceedings (1977-2023)

Key points

1. Intake is affected by complex interactions between signals from the digestive tract, intermediary metabolism and energy supply, and behavioural signals associated with learned behaviours or sensory signals.
2. The ideal sward needs to have characteristics that are similar to total mixed rations to achieve high intake and animal performance.
3. Genetic manipulation of plants may offer an accelerated rate of plant improvement, but benefits need to be demonstrated in a systems context.

Overview Of Animal Production From Pastures In Ireland, M. J. Drennan, A. F. Carson, S. Crosse

IGC Proceedings (1977-2023)

Key points

The importance of grassland to agriculture in Ireland is indicated by the fact that:

1. Sixty percent of agricultural output is from grassland as cattle, milk and sheep products.
2. Over 90% of the total farmed area is in grass.
3. Livestock are almost entirely dependent on grazed grass for 200 to 235 days of the year.
4. Grass conserved as silage is the main source of fodder in winter.
5. To improve competitiveness changes are continuously taking place, which include:

• increased suckler herd size and a movement to late maturing continental cattle breeds;
• movement in the dairy herd towards Holstein with increased …

Paternal Ages And Genetic Diseases And Congenital Anomalies, Neda Hamood

The Pegasus Review: UCF Undergraduate Research Journal

he purpose of this research is to investigate the link between Advanced Paternal Ages (APA) (i.e., APA ≥ 35 years and APA ≥ 50 years) and genetic diseases and congenital anomalies. Currently, the relationship between both APA and genetic diseases and congenital anomalies remains unclear. There is room for improvement, however, to investigate systematically the relationship between specific congenital anomalies in newborns and APA. More recently, the link between APA (as opposed to existing studies analyzing Advanced Maternal Age alone) and genetic diseases has been recognized by researchers, epidemiologists, and various health experts. Thus, this study serves to examine the …