Digital Commons Network^™

Colonization-Persistence Trade-Offs In The Human Microbiome, Liam F. Nokes

Environmental Studies Senior Theses

Understanding how diverse microbial taxa coexist in the human body without competitively excluding one another remains a key challenge in microbiome ecology. One proposed explanation is the colonization-persistence trade-off, where species with high colonization ability are poor persisters, and vice versa. We test for this trade-off across human associated microbial communities among many individuals and in multiple body sites using a large-scale participant-level meta-analysis of longitudinal microbiome datasets curated from the MGnify database. We applied island biogeography-based models to calculate effective colonization and persistence rates for microbial families and genera across 606 individuals over twenty-six studies. Regression of the log-transformed …

Reflections On Co-Ordinating Peer-Assisted Learning In A University Mathematics Department, Subhrajyoti Saha

Irish Journal of Academic Practice

This reflective paper explores the experience of the author while co-ordinating a relaunch of Peer-Assisted Learning (PAL) within the Department of Mathematical Sciences at a UK university. PAL involves senior students supporting first-year students through regular collaborative learning sessions, fostering both academic engagement and peer mentoring. The paper discusses the practical challenges encountered during implementation, such as student participation, scheduling, and training of PAL leaders, alongside the strategies that proved effective. Drawing on these experiences, the author will suggest potential improvements to enhance the impact of PAL in future iterations. The insights shared may be of value to other academics …

Policy Paper Assessing The Risk Of Obstructive Sleep Apnea In The College Football Player, Joseph C. Archer

Doctor of Nursing Practice Projects

Sleep is a vital yet often overlooked component of athletic performance, particularly in collision sports such as football. Despite growing evidence connecting obstructive sleep apnea (OSA) with cognitive impairment, cardiovascular risk, and injury, standardized screening is rarely implemented in collegiate athletics. This project aimed to assess the risk of obstructive sleep apnea (OSA) in college football players aged 18–25 using the STOP-BANG screening tool and to evaluate the impact of an educational intervention on the knowledge of athletic trainers. The purpose was to identify at-risk athletes early, promote timely intervention, and improve athletic trainers' understanding of OSA. The project addressed …

Accessibility Challenges Encountered By People With Disabilities And Older Residents Of Rural Areas, Sidney Ackerman, Ariana Aghevli, Jenna Aguilar, Nicholas Alfano, Yousef Altayeb, Michael Bennett, Alexander Bergendorf, Margaux Bouret, Maria Canazart, Samantha Campbell, Jonah Carter, Michelle Chen, Morgan Coghlan, Chloee Copper, Fiona Crenshaw, Gabi Durkin, Defne Ekici, Ryan Ficarra, Mckinzie Hammond, Lauren Hedges, Aidan Jones, Shreya Krishnan, Roey Kuo, Allison Lisota, Mary Maffei, Gianna Marzen, Matthew Mauermann, Ayron Milgrom, Rohit Mukherjee, Amanda Munsell, Sunita Nhemafuki, Matthew Ottenweller, Joe Pierzakowski, Tejasi Raghuprasad, Urja Raipancholia, Neha Rajeev, Allie Ranaldi, Sarah Sammon, Maria Sequeria, Nicole A. Stepp, Bekah Spors, Justine Talbert, Sveni Thalor, Erin Thomas, Pablo Torres, Matthew Williams, Bradley S. Duerstock, Yilun Li

Undergraduate Coursework

No abstract provided.

Implementing Exercise Is Medicine At Byu, Destiny Rose H. Romero

Undergraduate Honors Theses

Exercise has been proven for millennia to have significant health benefits, both preventative and curative. Many modern diseases and ailments can be prevented, alleviated, or even cured with increased physical activity. Unfortunately, the United States health system has yet to effectively integrate exercise into mainstream medical models. The American College of Sports Medicine (ACSM) is working to solve this disconnect through their global health initiative Exercise is Medicine (EIM). Most relevant to BYU is their EIM-On Campus program, which incorporates principles of exercise medicine into colleges and universities. This thesis first explores the dynamics of the health system that inhibit …

Untying The Knot: All Of Us Strangers And The Transgressive Encounter, Luka Romney

Undergraduate Honors Theses

Trauma is a perennial human problem that has only recently received sustained attention from the academic community. Within the interdisciplinary field of memory studies, there has been a significant push to not only identify and theorize trauma but also map out and propose ways to move through and beyond the constraints of trauma. This article will use Andrew Haigh’s 2023 film All of Us Strangers to theorize an experience that forms a redemptive foil to trauma that I term encounter. These redemptive encounters are sticky and unwieldy, and they require a variety of critical frames to draw out their ultimate …

Strivers, Ambivalence, And The Implications Of Wholeheartedness, Kaia K. Hathaway

Undergraduate Honors Theses

In this thesis, I examine Harry Frankfurt’s account of the will and its implications for ambivalence, particularly in the context of moral striving. I begin by outlining Frankfurt’s hierarchical model of desires and his view that ambivalence represents a failure of agency. I then explore his proposed solution—wholeheartedness—which aims to resolve inner conflict by rejecting incompatible desires. Drawing on David Velleman and Justin Coates, I argue that Frankfurt’s view faces both agential and ethical challenges, especially for individuals engaged in upward mobility, or “strivers.” I suggest that the experiences of strivers—those who must navigate competing ethical commitments—pose a unique challenge …

Female Religiosity In The United Farm Workers Movement, Keylla Ortega

Undergraduate Honors Theses

This thesis examines female religiosity in the United Farm Workers movement. Using primarily a collection of essays written by UFW volunteers, this thesis highlights key moments in UFW history when women added to the religious direction of the UFW through innovative ideas and their personal faith. This thesis adds to recent scholarship dedicated to highlighting the stories of rank-and-file members of the UFW. It also adds to the Chicana scholarship that has recognized the consistent leadership of women in the UFW by demonstrating women’s religious and spiritual leadership in the UFW.

Sisyphus Smiles: Essays On Living Well In The Face Of Absurdity, Brooke N. Smith

Undergraduate Honors Theses

In this thesis, I explore questions regarding the nature of meaningfulness and living well in the face of absurdity. Socrates famously stated, “The unexamined life is not worth living,” therefore, in the following essays I delve into these fundamental questions by reflecting on my own life and analyzing it in light of various philosophical notions. The two essays center around an analysis of Albert Camus’s “The Myth of Sisyphus,” ultimately highlighting the distinction between Sisyphus’s situation and our own as human beings. The first essay largely examines Maurice Merleau-Ponty’s theory of embodiment, how his conception of embodiment plays out in …

Best Practices For Creating An Addiction Curriculum Within Family Medicine Residency Programs: A Qualitative Analysis Of Expert Opinion, Gregory A. Jaffe, Barisue Brodsky, Jacob Buckley, Brooke Mauriello, Corey Pasakarnis, Paul Rizzo, Madison Smith, Randi Sokol

Department of Family & Community Medicine Faculty Papers

Background and Objectives: Primary care physicians are well-positioned to be at the forefront of screening for and treating substance use disorders (SUDs). In addition, the Accreditation Council for Graduate Medical Education has deemed addiction training a common program requirement for all residency programs. With less than one-third of family medicine residency programs providing addiction training, understanding best practices for addiction training is important.

Methods: We interviewed 12 faculty at family medicine residency programs across the country who have a strong reputation for addiction training. We analyzed interview transcripts thematically to identify best practices for creating and providing addiction curricula.

Results: …

The Captive Audience Doctrine Today, R. George Wright

Duke Journal of Constitutional Law & Public Policy

No abstract provided.

An International Perspective On Geography Curricula: Paving A Way Forward For Geographical Thinking, Tomáš Bendl, Hilde Storrøsæter, Lene Møller Madsen, David Trokšiar, Raphaële De La Martinière, Shanshan Liu, Sizakele Serame, Jerry T. Mitchell, Péter Bagoly-Simó, Yushan Duan, Gillian Kidman

Faculty Publications

Geographical thinking is a cornerstone of modern geography education. Despite its universal value, no large-scale international study has systematically examined its integration into diverse curricular documents. This study investigates how geographical thinking is embedded in the curricula of nine countries, focusing on content and procedural dimensions. Using a structured analytical framework, the research reveals significant patterns and gaps, particularly the underrepresentation of place as a central concept, the lack of explicit focus on geographical thinking, and the limited emphasis on its procedural dimension. The findings emphasise the need for stronger interconnections between these dimensions to promote a more comprehensive approach …

Peer-Assisted Learning Strategies: An Agentic Instructional Approach To Mathematical Self-Efficacy And Achievement In Special Education Settings At High-Poverty Schools, Erin Lm Roman

Education Dissertations

In many high-poverty schools, students with disabilities continue to face significant barriers and challenges when compared to their typically developing peers. A lack of tangible or positive experiences often leads to low self-efficacy and hindered achievement. This study explored Peer-Assisted Learning Strategies (PALS) as an instructional approach rooted in student agency. A convergent mixed-methods quasi-experimental design investigated how agentic PALS impacted mathematical self-efficacy and achievement. PALS leveraged neuroscience principles to support agency through skill-aligned peer pairings as dyads that eliminated power differentials. Four structured activities reinforced the model-and-memory sequence, enhancing both conceptual understanding at the neurobiological level and visible …

A Multi-National Questionnaire-Based Analysis Of Dental Students’ Knowledge Of The Management Of Deep Caries And The Exposed Pulp, Venkateshbabu Nagendrababu, Arindam Dutta, Ana Arias, Aleksandar Jakovljevic, Ahmed Hieawy, Frank C. Setzer, Jugoslav Ilic, Milos Beloica, Meric Karapinar Kazandag, Nandini Suresh, Paul V. Abbott, Raghavendra M. Shetty, Srinivasan Narasimhan, Victoria Sh Yu, Vellore Kannan Gopinath, Ya Shen, Henry F. Duncan

School of Dentistry Faculty Publications

Introduction and aims: To evaluate knowledge regarding the management of deep carious lesions and exposed pulps among undergraduate and postgraduate endodontic students from ten dental institutions across ten countries, and the impact of operator (material, antibiotic prescription) and patient-related (age, symptoms) factors on their treatment protocols. Methods: An online questionnaire was distributed to evaluate student knowledge of the management of deep caries and exposed pulp related to four clinical scenarios. Simple descriptive statistics were used to describe the data and McNemar tests were employed to identify significant differences between the scenarios. The P-value was set at 5%. Results: A total …

Between Word And World: Textual Space In Modern Sephardic Literature, Inci Cetin

Comparative Literature M.A. Essays

In the context of modern Sephardic literature, this paper defines “textual space” as the narrative’s self-conscious arrangement of its own textual elements such as time, space, and language to negotiate a position vis-à-vis the nation-state that is neither fully subsumed within nor completely outside of it. Textual spaces neither conform to the nation state’s borders even though they write from it, nor to nationalist temporalities as they continue a narrative thread that reaches back to 15th-century Spain. Through Myriam Moscona’s Tela de sevoya (2012) and Mario Levi’s Istanbul Was a Fairytale (1999), this paper investigates how textual spaces are deliberately …

Fluorescence-Guided Ureteral Identification In Robotic Surgery For Advanced Endometriosis: A Comparison Of Junior Versus Senior Surgeons, Linda A Alpuing Radilla, Qiannan Yang, Daniel Y Lovell, Tamisa Koythong, Brooke Thigpen, Luis E Delgadillo Chabolla, Qianqing Wang, Xiaoming Guan

Faculty, Staff and Students Publications

Identifying the ureters in patients with advanced endometriosis and severe pelvic adhesive disease can be challenging. Adhesiolysis along the deformed pelvic sidewall may increase the risk of prolonged operative time and incidental ureteral injury. This study aimed to evaluate the safety and surgical outcomes of using Indocyanine Green (ICG) under near-infrared fluorescence for intraoperative ureteral localization and preservation during robot-assisted laparoscopic surgery (RALS) for advanced endometriosis, comparing procedures performed by two junior surgeons to those performed by one senior surgeon. This was a retrospective observational case series conducted by three minimally invasive gynecologic surgeons (X.G., T.K., B.T.) at a single …

Self-Collection For Cervical Cancer Screening In A Safety-Net Setting: The Prestis Randomized Clinical Trial, Jane R Montealegre, Susan G Hilsenbeck, Shaun Bulsara, Susan L Parker, Trisha L Amboree, Matthew L Anderson, Maria Daheri, Maria L Jibaja-Weiss, Kathleen M Schmeler, Ashish A Deshmukh, Elizabeth Y Chiao, Michael E Scheurer

Center for Medical Ethics and Health Policy Staff Publications

Importance: There are limited data on the effectiveness of mailed self-collection to increase cervical cancer screening (CCS) participation in underresourced health care settings.

Objective: To compare the effectiveness of mailed self-collection kits, with and without patient navigation, to telephone reminders to increase CCS in a safety-net health system.

Design, setting, and participants: This pragmatic, parallel, single-blinded, randomized clinical trial within a publicly funded safety-net health system in Houston, Texas, compared (1) telephone reminder (TR) for clinic-based screening, (2) TR with mailed self-collection (SC), and (3) TR with mailed SC and patient navigation among a random sample of CCS-eligible patients not …

Preliminary Evidence For Lensing-Induced Alignments Of High-Redshift Galaxies In Jwst-Ceers, Viraj Pandya, Abraham Loeb, Elizabeth J. Mcgrath, Guillermo Barro, Steven L. Finkelstein, Henry C. Ferguson, Norman A. Grogin, Jeyhan S. Kartaltepe, Anton M. Koekemoer, Casey Papovich, Nor Pirzkal, L.Y. Aaron Yung

Pacific Faculty Work

The majority of low-mass ( log 10 M * / M ⊙ = 9 - 10 ) galaxies at high redshift (z > 1) appear elongated in projection. We use JWST-CEERS observations to explore the role of gravitational lensing in this puzzle. The typical galaxy-galaxy lensing shear γ ∼ 1% is too low to explain the predominance of elongated early galaxies with an ellipticity e ≈ 0.6. However, nonparametric quantile regression with Bayesian Additive Regression Trees (or BART) reveals hints of an excess of tangentially aligned source-lens pairs with γ > 10%. On larger scales, we also find evidence for weak-lensing shear. …

Exploring Muslim American Attitudes Toward Genetic Testing: Perceptions, Barriers, And Ethical Considerations, Hannah Mahmoud

University Honors Theses

This thesis explores perceptions and attitudes toward genetic testing within the Muslim American community, a group often underrepresented in genomic research and public health discourse. Using a community-distributed digital survey, data was collected from 50 self-identified Muslim Americans on their familiarity with genetic testing, reproductive and ethical considerations, and the influence of religious factors. While only 18% had undergone genetic testing themselves, many were familiar through family or friends, and most expressed cautious interest—especially when results could influence future family planning. Education level, age, and religious values shaped both comfort and understanding.

A key theme was the desire for culturally …

If You Give A Website A Cookie: Educating Children About Online Privacy, Tina Mccomiskey

University Honors Theses

Internet usage increases every year, and internet-connected apps and websites make up a large portion of this growth, so it becomes more important to understand how the information we share on the internet can impact our daily lives. From companies using personal data for targeted advertising to hackers exploiting accounts by using public information to answer security questions, poor internet practices can cause a great deal of harm. These forms of exploitation show the need for more education on internet privacy. My Privacy Awareness Learning Games (myPAL Games) was designed to address this gap in education for children …

From Prohibition To Prescription: Exploring Injustice, Bias, And Science-Based Solutions, Alexander Campos

University Honors Theses

This thesis critiques the war on drugs for disproportionately targeting minority communities and prioritizing systemic exploitation over public health. It examines the flawed, politically influenced DEA drug scheduling process, which neglects evidence of the medical benefits of substances like cannabis, psilocybin, LSD, DMT, and MDMA. This thesis gives a brief history of the evolution of US drug policy, which contributed to mass incarceration, reinforced racial disparities, and failed to reduce overdose deaths. It also highlights the potential mental health benefits of decriminalizing and regulating psychedelics to treat conditions like PTSD, depression, and substance abuse disorder. This thesis concludes by promoting …

Death To Comphet: A Chapina Southern Lesbian Story, Doraly Oneida Perez-Valdez

University Honors Theses

This paper is a counterstory that fights narratives that have been placed upon Latina Lesbians by everyone but us. The main topic is compulsory heteronormativity also known as "comphet". This autoethnography explains how "comphet" may affect different identities but specifically a Latina Lesbian from the South. There are nine chapters that explain how each topic affects a different aspect of identity but centers lesbianism. Societal reasons, cultural reasons, "date to marry" culture, Southern upbringing, sex education received, racial and gender stereotypes, and capitalism are all of the topics being explored through the lens of a Southern Latina Lesbian. These topics …

From Lockdown To Learning: Understanding Motivation Shifts In High School Students Due To The Covid-19 Pandemic, Kelly Lindberg

University Honors Theses

The COVID-19 pandemic induced profound disruptions to the educational landscape, significantly impacting high school students' motivation to learn. This thesis explores how these disruptions affected students' intrinsic and extrinsic motivations through the lenses of three motivational theories: Self-Determination Theory, Maslow’s Hierarchy of Needs, and Expectancy-Value Theory. By examining changes in the learning environment, social connections, and mental health before, during, and after the pandemic, this study identifies key factors that shaped changes in students' academic engagement. The shift to online learning during the pandemic, combined with social isolation and increased mental health challenges, diminished students' intrinsic motivation and weakened their …

Forecasting Influenza Rates Using Machine Learning: A Study Of Chatgpt's Predictive Accuracy, Sara Saleh

University Honors Theses

This study evaluates ChatGPT's ability to forecast influenza rates, such as the number of flu cases, hospitalizations, and death during peak season periods using CDC data, and comparing forecasts against actual results to calculate statistical accuracy and consistency. Influenza forecasting is essential for public health planning, but traditional methods may not always provide timely or accurate predictions. In this research study, ChatGPT was utilized to predict the influenza rates for the following week based on the previous week's data obtained from the FluView surveillance system. The predicted rates were compared to the actual influenza rates to assess the model's overall …

Codifying Capital: Legal Power, Racial Hierarchy, And The Gendered Dynamics Of Law, Tavia Andrew

University Honors Theses

This paper analyzes how law operates as a structuring force within racial capitalism by applying Austin Turk's "law as power" framework. It explores how legal institutions not only reflect but actively reproduce racial and gender hierarchies through their functions. Drawing from foundational work by Cedric Robinson, W.E.B. Du Bois, Angela Harris, Kimberlé Crenshaw, and others, this paper defines racial capitalism as a system in which economic exploitation is inseparable from racial and gender domination. The first section contextualizes the emergence of racial capitalism and its intersection with gender, emphasizing how bodies are commodified and governed through legal regimes. The core …

Inhibitory Control: A Mediator Between Sensory Responsivity And Externalizing Behaviors In Children On The Autism Spectrum, Kaitlyn M. Drafton

Clinical Psychology Dissertations

Sensory differences are among the most commonly reported symptoms in children on the autism spectrum and have been linked to both externalizing behaviors and executive functioning challenges. However, few studies have explored the potential mechanisms that underlie these relationships. The present study examined whether inhibitory control mediates the relationship between sensory responsivity and externalizing behaviors in young autistic children, each rated via caregiver-report measures. Participants included 107 caregivers of autistic children between the ages of 5-10 years old. It was hypothesized that higher levels of sensory responsivity would predict greater difficulty with inhibition, which in turn would be associated with …

A Mixed-Methods Investigation Of Lesson Field Tests And Subsequent Learning Outcomes Amongst Fourth Grade Public-School Students In Los Angeles County, Amber Lynwood

International Christian Community of Teacher Educators Journal

This mixed methods study sought to field test a series of four lessons designed for fourth graders in order to expand historical understandings concerning Black Americans. The primary goal of the study was to determine the effectiveness of the lessons, measured by statistically significant positive changes in knowledge on pre and post-tests. Given the limited empirical work on Black history teaching, this study sought to address this gap in the literature.

Secure Your Hardware With Randomization And Redundancy, Dennis Cao, Joseph Khamisy, Sumeet Upadhya

Computer Science and Engineering Senior Theses

Differential Fault Analysis (DFA) is a potent hardware attack that threatens cryptographic security by injecting faults into a cipher implementation to reveal secret keys. This project aims to mitigate DFA attacks on the Advanced Encryption Standard (AES) by implementing targeted countermeasures in an embedded AES-128 encryption core. Two key techniques are explored: Randomization and Triple Modular Redundancy (TMR). The randomization approach introduces unpredictability into the encryption process, which involves inserting dummy rounds, artificial noise, and random delays, to disrupt an attacker’s timing and analysis, while TMR provides redundancy by replicating critical rounds of computation and using majority voting to correct …

Revit Walasee: An Auto-Generated In-Wall Revit Model, Ally Delgado, Andrew Kimball, Calianna Collins, Yi Qian Goh

Computer Science and Engineering Senior Theses

The Revit WalaSee is a software-hardware integration tool designed to make building renovations smarter and more sustainable. In the construction industry, rework and demolition make up a large part of global construction waste and carbon emissions, largely due to the lack of internal wall documentation in older buildings. Our project addresses this issue by developing the pipeline between the Walabot wall scanner, a handheld device that detects hidden elements behind drywall, and Autodesk Revit, a widely used platform for Building Information Modeling (BIM).With the Revit WalaSee, someone without extensive technical training could scan any wall and produce accurate 3D modelling …

The Bone Is Not Alone: Skeletal Muscle Is A Novel Source Of Fibroblast Growth Factor 23, Kylie Heitman

All ETDs from UAB

Chronic kidney disease (CKD) is a major public health issue often accompanied by various pathologies. Hyperphosphatemia contributes to a range of complications, including vascular calcification, systemic inflammation, anemia, left ventricular hypertrophy, and skeletal muscle atrophy. Phosphate homeostasis is tightly regulated through a combination of renal excretion and its storage in bones, with fibroblast growth factor (FGF) 23 playing a central role in this regulation. Produced primarily by osteocytes in response to elevated serum phosphate, FGF23 helps maintain phosphate balance by promoting renal phosphate excretion and inhibiting the synthesis of vitamin D and parathyroid hormone. Dysregulation of FGF23 is associated both …