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Elucidating The Action Of A Regulatory Lipid Ligand Via Molecular Simulation: Cholesterol Swarms And The Inwardly Rectifying Potassium Channel, Belinda Akpa, Nicolas Barbera, Irena Levitan 2018 North Carolina State University

Elucidating The Action Of A Regulatory Lipid Ligand Via Molecular Simulation: Cholesterol Swarms And The Inwardly Rectifying Potassium Channel, Belinda Akpa, Nicolas Barbera, Irena Levitan

Biology and Medicine Through Mathematics Conference

No abstract provided.


Modeling Pharmaceutical Inhibition Of Glucose-Stimulated Renin-Angiotensin System In Kidneys, Ashlee N. Ford Versypt, Minu R. Pilvankar, Hui Ling Yong 2018 Oklahoma State University - Main Campus

Modeling Pharmaceutical Inhibition Of Glucose-Stimulated Renin-Angiotensin System In Kidneys, Ashlee N. Ford Versypt, Minu R. Pilvankar, Hui Ling Yong

Biology and Medicine Through Mathematics Conference

No abstract provided.


Learning In Bio-Molecular Computing Systems, Lauren Braun 2018 Portland State University

Learning In Bio-Molecular Computing Systems, Lauren Braun

Maseeh Summer Undergraduate Research Experience

Many potential applications of biochemical computers involve the detection of highly adaptable and dynamic chemical systems, such as emerging pathogens. Current technology is expensive to develop and unique to each application, thus causing limitations in accessibility. In order to make this type of computing a realistic solution to problems in the medical field, a biochemical computer would need to be adaptable to work in a variety of applications. Banda et al. (2014) previously proposed a first dynamic biochemical system that was capable of autonomous learning. For this project we studied a framework similar to Banda’s but in two separate pieces, …


Predicting The Dynamic Binding Capacities For Adsorbents Using Bsa As A Model Protein, Gaoshan Li 2018 Rose-Hulman Institute of Technology

Predicting The Dynamic Binding Capacities For Adsorbents Using Bsa As A Model Protein, Gaoshan Li

Rose-Hulman Undergraduate Research Publications

Membrane adsorbers are one alternative to traditional bead-based chromatography that receive attention in the bioseparation process because of their ability to process material with lower residence times. However some properties of membranes make membrane adsorbers unrealistic for some applications. For example, some membrane adsorbers exhibit lower binding capacities compared with the traditional bead-based chromatography counterparts. The dynamic binding capacity (DBC) in this study is defined as the amount of protein bound in the column when the outlet reaches a certain concentration, which is 10% [2], and the equilibrium binding capacity (EBC) is the binding capacity under the equilibrium conditions, when …


Radical Social Ecology As Deep Pragmatism: A Call To The Abolition Of Systemic Dissonance And The Minimization Of Entropic Chaos, Arielle Brender 2018 Fordham University

Radical Social Ecology As Deep Pragmatism: A Call To The Abolition Of Systemic Dissonance And The Minimization Of Entropic Chaos, Arielle Brender

Student Theses 2015-Present

This paper aims to shed light on the dissonance caused by the superimposition of Dominant Human Systems on Natural Systems. I highlight the synthetic nature of Dominant Human Systems as egoic and linguistic phenomenon manufactured by a mere portion of the human population, which renders them inherently oppressive unto peoples and landscapes whose wisdom were barred from the design process. In pursuing a radical pragmatic approach to mending the simultaneous oppression and destruction of the human being and the earth, I highlight the necessity of minimizing entropic chaos caused by excess energy expenditure, an essential feature of systems that aim …


Wafer Enhanced Electrodeionization For Conversion Of Co2 Into Bicarbonate Feed For Algae Cultured Photobioreactors, Kayvan Afrasiabi 2018 University of Arkansas, Fayetteville

Wafer Enhanced Electrodeionization For Conversion Of Co2 Into Bicarbonate Feed For Algae Cultured Photobioreactors, Kayvan Afrasiabi

Chemical Engineering Undergraduate Honors Theses

The world has acknowledged climate change as a global crisis that demands considerable attention, with one of the largest culprit being carbon emissions from industrial processing and power generation. While reduction in carbon emissions is the principal action towards mitigating the effects of climate change, scientists and engineers have given increased attention to alternative sources of energy as well as methods of carbon sequestration to coax traditional manufactory and industry into environmentally friendly and sustainable practices. One technology of this nature is the use of wafer-enhanced electrodeionization (WE-EDI) membranes to convert gaseous carbon dioxide (CO2) from industrial flue …


Development Of An In Vitro Platform For The Exploration Of Skeletal Muscle Cell Mechanobiology, Sydney Spradlin 2018 University of Arkansas, Fayetteville

Development Of An In Vitro Platform For The Exploration Of Skeletal Muscle Cell Mechanobiology, Sydney Spradlin

Biomedical Engineering Undergraduate Honors Theses

Muscles have the natural ability to regenerate when damaged. This works to keep the body functioning, unless this ability is overwhelmed. Volumetric muscle loss (VML) occurs when a substantial amount of a muscles mass is lost. This leads to the development of scar tissue, and often a loss of function. In order to find a solution for this condition, in vitro models are needed to explore the mechanobiology of skeletal muscle cells. Two platforms were developed in this study, to explore 3 factors: orientation, strain, and supporting structure. One platform used fibronectin stamped lanes on PDMS to encourage cell growth …


Removal Of Carbamazepine From Drinking Water, Paola Marrero-Rivera, Adam Johnson, Jordan Alex Gadberry, Juan Rodriguez, Thomas Krumpolc, Zach Wiese 2018 University of Arkansas, Fayetteville

Removal Of Carbamazepine From Drinking Water, Paola Marrero-Rivera, Adam Johnson, Jordan Alex Gadberry, Juan Rodriguez, Thomas Krumpolc, Zach Wiese

Chemical Engineering Undergraduate Honors Theses

Due to the increasing prevalence of prescription medication over the past few decades, pharmaceuticals have accumulated in various water sources. This has become a public health concern because many pharmaceuticals have limited research on the effects of chronic low-level exposure.One pharmaceutical of interest that has been detected in water sources is carbamazepine. Carbamazepine (CBZ) is a common pharmaceutical prescribed for the treatment of seizure disorders, neuropathic pain, and various psychological disorders. It’s mechanism of action is “sodium channel blocking,” which is the impairment of conduction of sodium ions in sodium channels. This, in effect, reduces nervous-system conductivity in key areas …


Cross-Linking Amyloid Forming Proteins For Improved Understanding Of Early Aggregation, Gram Booth 2018 University of Arkansas, Fayetteville

Cross-Linking Amyloid Forming Proteins For Improved Understanding Of Early Aggregation, Gram Booth

Chemical Engineering Undergraduate Honors Theses

Alzheimer’s disease is the only disease in the ten leading causes of death in the United states that cannot be slowed, prevented, or cured. Alzheimer’s dementia and type II diabetes are the top two diseases caused by improper protein folding, aggregation, and deposition of fibrillar plaques in tissues. These plaques, originally thought to be the cause of these diseases, have been discovered to be mostly benign and representative of the later stages of the disease. The smaller, more soluble oligomeric aggregates are responsible for the death of pancreatic and neural cells. Many oligomeric species are unstable and exist only for …


Comparing Stenotic Blood Flow In Three- And Two-Dimensional Arterial Renderings Using Computational Fluid Dynamics And Multiphase Mean Age Theory., Jacob S. Garza 2018 University of Louisville

Comparing Stenotic Blood Flow In Three- And Two-Dimensional Arterial Renderings Using Computational Fluid Dynamics And Multiphase Mean Age Theory., Jacob S. Garza

Electronic Theses and Dissertations

Over one million invasive coronary angiography procedures are performed annually in patients who experience chest pain or are known to have coronary artery disease. The procedure is carried out to ascertain the degree of arterial blockage (stenosis) that hinders blood flow to the heart. A cardiologist performing the procedure determines the physiological degree of a stenosis by either visual estimation, which is routine practice, or by invasively measuring fractional flow reserve (FFR), which is the current gold standard that has been demonstrated to improve patient outcomes and temper the cost of healthcare. Nevertheless, FFR is performed in only 10–20% of …


Development Of A Novel Bioactive Glass Suitable For Osteosarcoma-Related Bone Grafts, Alireza Rahimnejad Yazdi, Lawrence Torkan, Stephen D. Waldman, Mark R. Towler 2018 Missouri University of Science and Technology

Development Of A Novel Bioactive Glass Suitable For Osteosarcoma-Related Bone Grafts, Alireza Rahimnejad Yazdi, Lawrence Torkan, Stephen D. Waldman, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

In this study, zinc borate-based glasses with increasing gallium content (0, 2.5, 5, 10, and 15 wt % Ga) were synthesized and their effect on the viability and proliferation of preosteoblasts and osteosarcoma cancer cells were investigated. Methyl thiazolyl tetrazolium (MTT) cell viability assays using glass degradation extracts revealed that the extracts from glasses with lower Ga contents could enhance the viability of preosteoblasts, while extracts from the glass composition with 15 wt % Ga caused statistically significant reduction of their viability. MTT cell viability assays using the extracts and osteosarcoma cells showed that only extracts from the glass composition …


The Effect Of Incorporating Different Concentrations Of Chlorhexidine Digluconate On The Degree Of Conversion Of An Experimental Adhesive Resin, Lamiaa Mahmoud Moharam, Haidy Nabil Salem, Hanaa Mahmoud Elgamily 2018 Missouri University of Science and Technology

The Effect Of Incorporating Different Concentrations Of Chlorhexidine Digluconate On The Degree Of Conversion Of An Experimental Adhesive Resin, Lamiaa Mahmoud Moharam, Haidy Nabil Salem, Hanaa Mahmoud Elgamily

Chemical and Biochemical Engineering Faculty Research & Creative Works

Background: The aim of this study was to evaluate the effect of chlorhexidine digluconate incorporation on the degree of conversion of an experimental adhesive resin. Material and methods: The experimental resin was prepared from 70 wt.% bisphenol A glycerolate dimethacrylate, 30 wt.% hydroxyethyl methacrylate, silanized SiO2 nanofillers, 0.5% of camphorquinone and ethyl 4-dimethylaminebenzoate (binary photo-initiator system). Five chlorhexidine digluconate concentrations (0, 0.5, 1, 2 and 4 wt%) were then incorporated into the experimental resin. Thirty Potassium Bromide pellets were prepared then divided into six groups (n=5/group), representing the tested adhesive resins (Single Bond 2, 0, 0.5, 1, 2 and …


Injectable Glass Polyalkenoate Cements: Evaluation Of Their Rheological And Mechanical Properties With And Without The Incorporation Of Lidocaine Hydrochloride, P. Niranjan, A. Alhalawani, S. Phull, I. Beniluz, B. Krishnan, P. Zalzal, Mark R. Towler 2018 Missouri University of Science and Technology

Injectable Glass Polyalkenoate Cements: Evaluation Of Their Rheological And Mechanical Properties With And Without The Incorporation Of Lidocaine Hydrochloride, P. Niranjan, A. Alhalawani, S. Phull, I. Beniluz, B. Krishnan, P. Zalzal, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Lidocaine hydrochloride is used as an anesthetic in many clinical applications. This short communication investigates the effect of complete substitution of lidocaine hydrochloride for deionized (DI) water on the physico-chemical properties of two novel glass polyalkenoate cements. Substituting DI water with lidocaine hydrochloride resulted in cements with shorter working times but comparable setting times and mechanical properties. Fourier transform infrared spectroscopy confirmed that the setting reaction in cements containing DI water and lidocaine hydrochloride was completed within 24 h, post cement preparation and maturation. Further, it was explained that lidocaine hydrochloride binds to poly(acrylic) acid (PAA) due to electrostatic forces …


The Effect Of Mg²⁺ Incorporation Into The Glass Phase Of Zinc-Based Glass Polyalkenoate Cements, Basel A. Khader, Omar Rodriguez, Mark R. Towler 2018 Missouri University of Science and Technology

The Effect Of Mg²⁺ Incorporation Into The Glass Phase Of Zinc-Based Glass Polyalkenoate Cements, Basel A. Khader, Omar Rodriguez, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

The suitability of glass polyalkenoate cements (GPCs) as injectable adhesives in orthopedics have been compromised by the presence of aluminum (Al), a component in the glass phase of all commercial GPCs. There has been considerable work on the development of Al-free GPCs which can be formulated based on calcium (Ca) zinc (Zn) silicate (Si) glasses. These materials, in terms of biocompatibility and mechanical properties, have potential for orthopedics. However, many of these experimental Al-free GPCs have setting times shorter than 60 s, restricting clinical applications. Here, the authors incorporate Magnesium (Mg) into the glass phase of Al-free GPCs in an …


A Continuum Model Of Mucosa With Glycan-Ion Pairing, James D. Sterling, Shenda M. Baker 2018 Missouri University of Science and Technology

A Continuum Model Of Mucosa With Glycan-Ion Pairing, James D. Sterling, Shenda M. Baker

Business and Information Technology Faculty Research & Creative Works

Advances in the study of glycosoaminoglycan biohydrogels, label-free electrokinetic analysis of soft-diffuse layers in contact with saline solutions, and elucidation of ion-specific behavior in many biochemical systems offer the opportunity to marry these principal features in a new mathematical model of the mucosal glycocalyx. The model is based on the electroquasistatic subset of Maxwell's equations in the form of the steady-state continuum Poisson–Boltzmann equation for electrostatics with explicit incorporation of pairwise binding of ions to fixed charged-groups in the hydrogel. The pairwise association is modeled using reversible bimolecular reactions via stoichiometric dissociation constants that represent the rule of matching water …


Raman Spectroscopy Predicts The Link Between Claw Keratin And Bone Collagen Structure In A Rodent Model Of Oestrogen Deficiency, M. Clare Caraher, Antonia Sophocleous, J. Renwick Beattie, Olive O'Driscoll, Niamh M. Cummins, Orlaith Brennan, Fergal J. O'Brien, Stuart H. Ralston, Steven E.J. Bell, Mark R. Towler, Aymen I. Idris 2018 Missouri University of Science and Technology

Raman Spectroscopy Predicts The Link Between Claw Keratin And Bone Collagen Structure In A Rodent Model Of Oestrogen Deficiency, M. Clare Caraher, Antonia Sophocleous, J. Renwick Beattie, Olive O'Driscoll, Niamh M. Cummins, Orlaith Brennan, Fergal J. O'Brien, Stuart H. Ralston, Steven E.J. Bell, Mark R. Towler, Aymen I. Idris

Chemical and Biochemical Engineering Faculty Research & Creative Works

Osteoporosis is a common disease characterized by reduced bone mass and an increased risk of fragility fractures. Low bone mineral density is known to significantly increase the risk of osteoporotic fractures; however, the majority of non-traumatic fractures occur in individuals with a bone mineral density too high to be classified as osteoporotic. Therefore, there is an urgent need to investigate aspects of bone health, other than bone mass, that can predict the risk of fracture. Here, we successfully predicted association between bone collagen and nail keratin in relation to bone loss due to oestrogen deficiency using Raman spectroscopy. Raman signal …


Catalytic Fast Pyrolysis Of Kraft Lignin Over Hierarchical Hzsm-5 And Hβ Zeolites, Yadong Bi, Xiaojuan Lei, Guihua Xu, Hui Chen, Jianli Hu 2018 Tianjin University of Technology

Catalytic Fast Pyrolysis Of Kraft Lignin Over Hierarchical Hzsm-5 And Hβ Zeolites, Yadong Bi, Xiaojuan Lei, Guihua Xu, Hui Chen, Jianli Hu

Faculty & Staff Scholarship

The hierarchical HZSM-5 and Hβ zeolites were prepared by alkaline post-treatment methods adopting Na2CO3, TMAOH/NaOH mixture, and NaOH as desilication sources, respectively. More mesopores are produced over two kinds of zeolites, while the micropores portion is well preserved. The mesopores formed in hierarchical Hβ zeolites were directly related to the basicity of the alkaline solution, indicating that Hβ zeolite is more sensitive to the alkaline post-treatment. The hierarchical HZSM-5 and Hβ zeolites are more active than the parent one for catalytic fast pyrolysis (CFP) of Kraft lignin. Hierarchical zeolites retained the function of acid catalysis, while additionally creating larger mesopores …


A Preliminary Evaluation Of The Ability Of Keratotic Tissue To Act As A Prognostic Indicator Of Hip Fracture Risk, J. Renwick Beattie, Diane Feskanich, M. Clare Caraher, Mark R. Towler 2018 Missouri University of Science and Technology

A Preliminary Evaluation Of The Ability Of Keratotic Tissue To Act As A Prognostic Indicator Of Hip Fracture Risk, J. Renwick Beattie, Diane Feskanich, M. Clare Caraher, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Studies have shown that Raman spectroscopic analysis of fingernail clippings can help differentiate between post-menopausal women who have and who have not suffered a fracture. However, all studies to date have been retrospective in nature, comparing the proteins in nails sourced from women, post-fracture. The objective of this study was to investigate the potential of a prospective test for hip fracture based on spectroscopic analysis of nail tissue. Archived toenail samples from post-menopausal women aged 50 to 63 years in the Nurses' Health Study were obtained and analysed by Raman spectroscopy. Nails were matched case-controls sourced from 161 women; 82 …


The Impact Of Gallium Content On Degradation, Bioactivity, And Antibacterial Potency Of Zinc Borate Bioactive Glass, Alireza Rahimnejad Yazdi, Lawrence Torkan, Wendy Stone, Mark R. Towler 2018 Missouri University of Science and Technology

The Impact Of Gallium Content On Degradation, Bioactivity, And Antibacterial Potency Of Zinc Borate Bioactive Glass, Alireza Rahimnejad Yazdi, Lawrence Torkan, Wendy Stone, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Zinc borate glasses with increasing gallium content (0, 2.5, 5, 10, and 15 Wt % Ga) were synthesized and their degradation, bioactivity in simulated body fluid (SBF), and antibacterial properties were investigated. ICP measurements showed that increased gallium content in the glass resulted in increased gallium ion release and decreased release of other ions. Degradability declined with the addition of gallium, indicating the formation of more symmetric BO3 units with three bridging oxygens and asymmetric BO3 units with two bridging oxygens in the glass network as the gallium content in the series increased. The formation of amorphous Ca-P …


Miscible Gases Based Eor In Unconventional Liquids Rich Reservoirs: What We Can Learn, Dheiaa Alfarge, Mortadha Alsaba, Mingzhen Wei, Baojun Bai 2018 Missouri University of Science and Technology

Miscible Gases Based Eor In Unconventional Liquids Rich Reservoirs: What We Can Learn, Dheiaa Alfarge, Mortadha Alsaba, Mingzhen Wei, Baojun Bai

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

Over the last decade, Unconventional Liquids Rich Reservoirs (ULR) have become the main target for oil and gas investors as conventional formations started to deplete and diminish in numbers. These unconventional plays have a huge oil reserve; however, the primary oil recovery factor is predicted to be less than 10%. Unconventional Improved Oil Recovery (UIOR) techniques are still a new concept in the oil industry since there is no commercial project reported for any IOR technique yet. Miscible gas based EOR technique might be the most potential strategy to improve oil recovery in such complex plays. In this study, a …


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