Biomedical Engineering and Bioengineering Commons^™

Biological Effective Dose (Bed) Distribution Matching For Obtaining Brachytherapy Prescription Doses & Dosimetric Optimization For Hybrid Seed Brachytherapy, Jakub Pritz

USF Tampa Graduate Theses and Dissertations

Radioactive seed implant brachytherapy is a common radiotherapy treatment method for prostate cancer. In current clinical practice, a seed consists of a single isotope, such as ¹²⁵I or ¹⁰³Pd. A seed containing a mixture of two isotopes has been proposed for prostate cancer treatment. This study investigates a method for defining a prescription dose for new seed compositions based on matching the biological equivalent dose (BED) of a reference plan.

Ten prostate cancer cases previously treated using single isotope seeds (5 using ¹²⁵I seeds and 5 using ¹⁰³Pd seeds) were selected for this study. Verification of …

A Microfluidic Device For Impedance Spectroscopy, Ahmet Can Sabuncu

Mechanical & Aerospace Engineering Theses & Dissertations

Recently, microfluidics has become a versatile tool to investigate cellular biology and to build novel biomedical devices. Dielectric spectroscopy, on the other hand, allows non-invasive probing of biological cells. Information on the cell membrane, cytoplasm, and nucleus can be obtained by dielectric spectroscopy provided that appropriate tools are used in specific frequency ranges. This dissertation includes fabrication, characterization, and testing of a simple microfluidic device to measure cell dielectric properties. The dielectric measurements are performed on human T-cell leukemia (Jurkat), mouse melanoma (B16), mouse hepatoma (Hepa), and human costal chondrocyte cells. Dielectric measurements consist of measuring the complex impedance of …

Multimodality Imaging Of Abnormal Vascular Perfusion And Morphology In Preclinical 9l Gliosarcoma Model, Moses M. Darpolor, Robert C. Molthen, Kathleen M. Schmainda

Biomedical Engineering Faculty Research and Publications

This study demonstrates that a dynamic susceptibility contrast-magnetic resonance imaging (DSC-MRI) perfusion parameter may indicate vascular abnormality in a brain tumor model and reflects an effect of dexamethasone treatment. In addition, X-ray computed tomography (CT) measurements of vascular tortuosity and tissue markers of vascular morphology were performed to investigate the underpinnings of tumor response to dexamethasone.

Reorganization Of Finger Coordination Patterns During Adaptation To Rotation And Scaling Of A Newly Learned Sensorimotor Transformation, Xiaolin Liu, Kristine M. Mosier, Ferdinando A. Mussa-Ivaldi, Maura Casadio, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

We examined how people organize redundant kinematic control variables (finger joint configurations) while learning to make goal-directed movements of a virtual object (a cursor) within a low-dimensional task space (a computer screen). Subjects participated in three experiments performed on separate days. Learning progressed rapidly on day 1, resulting in reduced target capture error and increased cursor trajectory linearity. On days 2 and 3, one group of subjects adapted to a rotation of the nominal map, imposed either stepwise or randomly over trials. Another group experienced a scaling distortion. We report two findings. First, adaptation rates and memory-dependent motor command updating …

A Quantitative And Standardized Robotic Method For The Evaluation Of Arm Proprioception After Stroke, Lucia Simo, Claude Ghez, Lior Botzer, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

Stroke often results in both motor and sensory deficits, which may interact in the manifested functional impairment. Proprioception is known to play important roles in the planning and control of limb posture and movement; however, the impact of proprioceptive deficits on motor function has been difficult to elucidate due in part to the qualitative nature of available clinical tests. We present a quantitative and standardized method for evaluating proprioception in tasks directly relevant to those used to assess motor function. Using a robotic manipulandum that exerted controlled displacements of the hand, stroke participants were evaluated, and compared with a control …

Biophysical Properties Of The Aorta In Patients With Marfan Syndrome And Related Connective Tissue Disorders: Evaluation With Mri And Computational Fluid Dynamics Modeling, Joseph A. Camarda, Michael G. Earing, Ronak Jashwant Dholakia, Hongfeng Wang, Sung Kwon, John F. Ladisa Jr., Margaret M. Samyn

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Energy Deposition In The Breast During Ct Scanning: Quantification And Implications For Dose Reduction, Franco Rupcich, Iacovos Kyprianou, Andreu Badal, Taly Gilat Schmidt

Biomedical Engineering Faculty Research and Publications

Studies suggest that dose to the breast leads to a higher lifetime attributable cancer incidence risk from a chest CT scan for women compared to men. Numerous methods have been proposed for reducing dose to the breast during CT scanning, including bismuth shielding, tube current modulation, partial-angular scanning, and reduced kVp. These methods differ in how they alter the spectrum and fluence across projection angle. This study used Monte Carlo CT simulations of a voxelized female phantom to investigate the energy (dose) deposition in the breast as a function of both photon energy and projection angle. The resulting dose deposition …

Effects Of Wrist Tendon Vibration On Targeted Upper-Arm Movements In Poststroke Hemiparesis, Megan O. Conrad, Robert A. Scheidt, Brian D. Schmit

Biomedical Engineering Faculty Research and Publications

Background. Impaired motor control of the upper extremity after stroke may be related to lost sensory, motor, and integrative functions of the brain. Artificial activation of sensory afferents might improve control of movement by adding excitatory drive to sensorimotor control structures. The authors evaluated the effect of wrist tendon vibration (TV) on paretic upper-arm stability during point-to-point planar movements. Methods. TV (70 Hz) was applied to the forearm wrist musculature of 10 hemiparetic stroke patients as they made center-out planar arm movements. End-point stability, muscle activity, and grip pressure were compared as patients stabilized at the target position …

Development Of A Rigid Body Computational Model For Investigation Of Wrist Biomechanics, Benjamin Majors

Theses and Dissertations

The wrist is one of the most complex joints in the human body. As such, the wrist joint is difficult to model due to the number of bones involved and its intricate soft tissue interactions. Many studies have attempted modeling the wrist previously; however, the majority of these studies simplify the joint into two-dimensions or idealized mechanical joints to reduce the complexity of the simulation. While these approaches still yield valuable information, the omission of a third-dimension or geometry defined movements limits the models’ usefulness in predicting joint function under non-idealized conditions. Therefore, the goal of this study was to …

Modeling Of Aortic Valve Anatomic Geometry From Clinical Multi Detector-Row Computed Tomography Images, Gregory A. Book

Master's Theses

Transcatheter aortic valve implantation (TAVI) is an emerging and viable alternative to surgical valve replacement. A TAVI procedure involves insertion of a catheter into the heart through an artery or transapically, and expanding valve stent in place. This procedure dramatically reduces the recovery time by eliminating the need for open heart surgery. Understanding the biomechanics of the stent-valve interaction is crucial for proper device deployment and function. In this study, we examine the extraction of valve geometries and creation of valve models from multi-detector row computed tomography (MDCT) images that may eventually be used to model stent expansion on a …

Incorporating Feedback From Multiple Sensory Modalities Enhances Brain–Machine Interface Control, Aaron J. Suminski, Dennis C. Tkach, Andrew H. Fagg, Nicholas G. Hatsopoulos

Biomedical Engineering Faculty Research and Publications

The brain typically uses a rich supply of feedback from multiple sensory modalities to control movement in healthy individuals. In many individuals, these afferent pathways, as well as their efferent counterparts, are compromised by disease or injury resulting in significant impairments and reduced quality of life. Brain–machine interfaces (BMIs) offer the promise of recovered functionality to these individuals by allowing them to control a device using their thoughts. Most current BMI implementations use visual feedback for closed-loop control; however, it has been suggested that the inclusion of additional feedback modalities may lead to improvements in control. We demonstrate for the …

Modeling Heat Transfer During Cooling Of Ready-To-Eat Meat And Poultry Products Using Three-Dimensional Finite Element Analysis And Web-Based Simulation, Jihan F. Cepeda Jimenez

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

The meat industry is required to comply with processing performance standards for preventing the growth of foodborne pathogens in products. These performance standards, established by the United States Department of Agriculture - Food Safety and Inspection Service (USDA-FSIS) require a reduction of Salmonella spp (lethality standard) and limit the growth of sporeforming bacteria (stabilization standard) in certain processed meat products. In general, strategies used to comply with these standards are associated with thermal processing. Meat processors have difficulties complying with these performance standards. Moreover, thermal processing deviations are an issue in the meat industry that generate uncertainty regarding the safety …

4-D Modeling Of Displacement Vector Fields For Improved Radiation Therapy, Elizabeth Zachariah

Theses and Dissertations

In radiation therapy, it is imperative to deliver high doses of radiation to the tumor while reducing radiation to the healthy tissue. Respiratory motion is the most significant source of errors during treatment. Therefore, it is essential to accurately model respiratory motion for precise and effective radiation delivery. Many approaches exist to account for respiratory motion, such as controlled breath hold and respiratory gating, and they have been relatively successful. They still present many drawbacks. Thus, research has been expanded to tumor tracking. This paper presents a spatio-temporal model for four dimensional CT reconstruction. The method begins with a set …

Synthesis And Characterization Of Electrospun Gelatin/Dendrimer Scaffold Encapsulated With A Silver As A Potential Antimicrobial Wound Dressing, Alpana Dongargaonkar

Theses and Dissertations

A novel nanofiber scaffold was fabricated and characterized as a potential antimicrobial wound dressing. Half generation polyamidoamine (PAMAM) dendrimer G3.5 was covalently conjugated to gelatin. Gelatin alone or with gelatin-dendrimer conjugates was electrospun into nanofiber scaffolds. Gelatin is a derivative of natural collagen, and it is biocompatible, non-toxic and inexpensive, making it a desirable component in a wound dressing. Dendrimers are synthetic polymers comprising of a central core, internal branches and reactive surface groups. They provide a structurally controlled architecture for drug release. Silver was incorporated into the scaffold in situ due to its broad spectrum of antimicrobial properties. The …

Development Of Electroencephalography Based Brain Controlled Switch And Nerve Conduction Study Simulator Software, Kai Qian

Theses and Dissertations

This thesis investigated the development of an EEG-based brain controlled switch and the design of a software for nerve conduction study. For EEG-based brain controlled switch, we proposed a novel paradigm for an online brain-controlled switch based on Event-Related Synchronizations (ERDs) following external sync signals. Furthermore, the ERD feature was enhanced by 3 event-related moving averages and the performance was tested online. Subjects were instructed to perform an intended motor task following an external sync signal in order to turn on a virtual switch. Meanwhile, the beta-band (16-20Hz) relative ERD power (ERD in reverse value order) of a single EEG …

Development Of An Integrated Soil Properties Mapping System, Rajveer S. Dhillon

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

One of the main goals of precision agriculture (PA) is to define spatial variability in soil properties within an agricultural field to make decisions that can maximize profitability and reduce negative environmental impact. Various soil sensor systems have been developed over the years to map soil properties on-the-go. In this study, an Integrated Soil Mapping System (ISMS) was developed to predict soil water content, soil organic matter, and soil mechanical resistance on-the-go using a capacitance moisture sensor, an optical sensor, and a load cell sensor respectively. These sensors were mounted on the ISMS for acquiring three different data layers at …

A Microfluidic Device To Establish Concentration Gradients Using Reagent Density Differences, Qingjun Kong, Richard A. Able, Jr., Veronica Dudu, Maribel Vazquez

Publications and Research

Microfabrication has become widely utilized to generate controlled microenvironments that establish chemical concentration gradients for a variety of engineering and life science applications. To establish microfluidic flow, the majority of existing devices rely upon additional facilities, equipment, and excessive reagent supplies, which together limit device portability as well as constrain device usage to individuals trained in technological disciplines. The current work presents our laboratory-developed bridged microLane system, which is a stand-alone device that runs via conventional pipette loading and can operate for several days without need of external machinery or additional reagent volumes. The bridged microLane is a two-layer polydimethylsiloxane …

Influence Of Topography Of Endovascular Stent Material On Smooth Muscle Cell Response, Vipul Taneja

All Theses

Although implantation of endovascular stents for the treatment of coronary and peripheral artery diseases has been one of the most rapidly used medical interventions, significant limitations in terms of a restenosis rate of 10-30% still persists. Neointimal hyperplasia characterized by a phenotypic shift of smooth muscle cells from contractile to synthetic type, has been deemed to be the predominant cause of restenosis. A number of stent surface parameters, including topography, have been attributed to play an important role in stent performance. Although endothelial cell and thrombotic response to surface roughness have been well evaluated, the effect of topography of the …

Neomycin-Enhanced Carbodiimide Cross-Linking For Glycosaminoglycan Stability In Bioprosthetic Heart Valves, Joshua Leong

All Theses

Valvular heart diseases lead to over 290,000 heart valve replacements worldwide each year, and approximately half of these involve replacement with a bioprosthetic heart valve (BHV) [1]. BHVs exhibit excellent hemocompatibility, but suffer from inadequate long-term durability with most adult implanted valves failing within 12 to 15 years after implantation [2]. Although this may be adequate for some individuals, BHV implantation may be contraindicated in younger individuals to avoid reoperation. Even in elder recipients, valve dysfunction can still cause death or reoperation that could be avoided with increased BHV durability. Therefore, investigation into methods of increasing BHV durability can not …

Characterization Of Anti-Proteolytic And Anti-Proliferative Activities Of Pentagalloylglucose; Its Potential Application As A Therapeutic Agent In Vascular Diseases, Chaitra Cheluvaraju

All Dissertations

Cardiovascular diseases are the leading causes of mortality in the United States and will cost around $500 billion this year alone. Elevated proteolytic activity, increased proliferation and migration of vascular smooth muscle cells are hallmarks of atherosclerosis, stenosis and aortic aneurysms. These diseases often manifest the transdifferentiation of vascular smooth muscle cells into osteoblast-like cells followed by deposition of hydroxyapatite–like mineral in the arterial walls.
Currently, there are no standard treatments available for vascular calcification or aneurysms. Atherosclerosis treatment options are limited to statins while balloon angioplasty and stenting – surgical procedures for stenosis, often end in restenosis. Therefore, we …