Geology Commons^™

Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols

United States Geological Survey: Staff Publications

Metapopulation ecology is a field that is richer in theory than in empirical results. Many existing empirical studies use an incidence function approach based on spatial patterns and key assumptions about extinction and colonization rates. Here we recast these assumptions as hypotheses to be tested using 18 years of historic detection survey data combined with four years of data from a new monitoring program for the Lower Keys marsh rabbit. We developed a new model to estimate probabilities of local extinction and colonization in the presence of nondetection, while accounting for estimated occupancy levels of neighboring patches. We used model …

Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification, Brett T. Mcclinktock, Larissa L. Bailey, Brian P. Dreher, William A. Link

United States Geological Survey: Staff Publications

As noninvasive sampling techniques for animal populations have become more popular, there has been increasing interest in the development of capture-recapture models that can accommodate both imperfect detection and misidentification of individuals (e.g., due to genotyping error). However, current methods do not allow for individual variation in parameters, such as detection or survival probability. Here we develop misidentification models for capture-recapture data that can simultaneously account for temporal variation, behavioral effects and individual heterogeneity in parameters. To facilitate Bayesian inference using our approach, we extend standard probit regression techniques to latent multinomial models where the dimension and zeros of the …

Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols

United States Geological Survey: Staff Publications

Metapopulation ecology is a field that is richer in theory than in empirical results. Many existing empirical studies use an incidence function approach based on spatial patterns and key assumptions about extinction and colonization rates. Here we recast these assumptions as hypotheses to be tested using 18 years of historic detection survey data combined with four years of data from a new monitoring program for the Lower Keys marsh rabbit. We developed a new model to estimate probabilities of local extinction and colonization in the presence of nondetection, while accounting for estimated occupancy levels of neighboring patches. We used model …

Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification1, Brett T. Mcclintock, Larissa L. Bailey, Brian P. Dreher, William A. Link

United States Geological Survey: Staff Publications

As noninvasive sampling techniques for animal populations have become more popular, there has been increasing interest in the development of capture-recapture models that can accommodate both imperfect detection and misidentification of individuals (e.g., due to genotyping error). However, current methods do not allow for individual variation in parameters, such as detection or survival probability. Here we develop misidentification models for capture-recapture data that can simultaneously account for temporal variation, behavioral effects and individual heterogeneity in parameters. To facilitate Bayesian inference using our approach, we extended standard probit regression techniques to latent multinomial models where the dimension and zeros of the …

Analysis Of Vesicular Porosity In Soils Using High-Resolution X-Ray Computed Tomograpy, Judith K. Turk, Robert C. Graham

Conservation and Survey Division: Faculty and Staff Publications

Vesicular horizons are common at the surface of arid and semiarid soils and play a critical role in regulating infiltration. Most methods for examining pore morphology in the vesicular horizon involve physical sectioning of the sample and individual measurement of pores, which is time-consuming and provides an incomplete view of the pores. The objectives of this study were to (i) develop methods for the classification and characterization of pores in the vesicular horizon using high resolution X-ray computed tomography (HRXCT) and (ii) use these methods to examine the distribution of pores within vesic-ular peds. Three intact peds were scanned by …

The Groundwater Atlas Of Lancaster County, Dana Divine

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Dune Formation On Late Holocene Sandy Bay Barriers Along Lake Michigan’S Door Peninsula: The Importance Of Increased Sediment Supply Following The Nipissing And Algoma High Lake-Level Phases, J. Elmo Rawling Iii, Paul R. Hanson

Department of Earth and Atmospheric Sciences: Faculty Publications

This study focuses on the geomorphology and geochronology of dunes formed on three sandy barrier systems at Clark, Europe and Kangaroo Lakes in Wisconsin’s Door Peninsula. The Lake Michigan shoreline in the peninsula contains abundant evidence for fluctuations in lake level with paleo-shoreline features that lie up to ~7 m above the present shoreline. Dunes are not very common along the Lake Michigan shoreline in Wisconsin, but the three bay barriers studied contain beach ridges that were buried by varying depths of eolian sand in the form of low relief sandsheets as well as parabolic and transverse dunes that have …

Upper Pleistocene And Holocene Palaeoenvironmental Records In Cueva Mayor Karst (Atapuerca, Spain) From Different Proxies: Speleothem Crystal Fabrics, Palynology And Archaeology., Virginia Martínez-Pillado, Arantza Aranburu, Juan Luis Arsuaga, Blanca Ruiz-Zapata, Maria José Gil-García, Heather Stoll, Iñaki Yusta, Eneko Iriarte, José Miguel Carretero, R. Lawrence Edwards, Hai Cheng

International Journal of Speleology

The Cueva Mayor karst system of Atapuerca, in Northern Spain, hosts a highly significant record of human occupation from the Pleistocene. The climatic context of the human activities during the Pleistocene-Holocene for this inland site has not been well constrained, since existing records of the palaeoclimatic evolution of the Northern Iberian Peninsula are from more distal coastal and high-elevation sites. In this study, we interpret the palaeoenvironmental information recorded on the petrography of a stalagmite and the pollen spectra of the Sierra de Atapuerca karst system during the last 20 kyr. The integration of both types of records has allowed …

Study Of Filled Dolines By Using 3d Stereo Image Processing And Electrical Resistivity Imaging, Mateja Breg Valjavec

International Journal of Speleology

This article deals with doline degradation due to uncontrolled waste dumping in the past in the Logatec Polje in Slovenia. It introduces a concept for determining 3D geometric characteristics (shape, depth, radius, area, and volume) of formerly concave landforms (i.e., recently filled dolines) by using a combination of two methods: (1) photogrammetric stereo processing of archival aerial photographs and (2) electrical resistivity imaging (ERI). To represent, visualize, and study the characteristics of the former surface morphology (i.e., the dolines before they were filled), a digital terrain model (DTM) for 1972 (DTM1972) was made using digital photogrammetry processing of five sequential …

Development Of Structural Basins And Domes On The Sinn El-Kaddab Plateau, Egypt: Insights From In Situ Data And Application Of Moderate Resolution Orbital Imagery Of The Seiyal Fault, Thomas J. Jerris

Masters Theses

"The Seiyal Fault, one of many east-west trending faults located in the Western Desert of Egypt, and associated structural basins and domes are investigated using remote sensing imagery and field studies. Analysis of Shuttle Reconnaissance Topography Mission data, multi-spectral data from the Landsat Thematic Mapper (LM), Landsat 7 Enhanced Thematic Mapper Plus (ETM+), the Advanced Spaceborne Thermal Emission and Reflectometer (ASTER) data, and imagery from Google Earth. Band combinations 3-2-1 and 7-4-2 in ETM+ and 3N-2-1 and 7-3-1 in ASTER, and Google Earth provided the most useful images for geologic mapping. The Seiyal Fault is best characterized as a zone …

The Effects That Liquid And Solid Cattle Manure Have On The Water Quality Of Drainage Ditches In Putnam County, Ohio, Janelle Horstman

Honors Projects

Lake Erie has experienced harmful algal blooms with increased frequency since the mid-1990s due to excess nutrients from Rivers, such as the Maumee River, and largely agricultural watersheds. Nonpoint source pollution from agriculture contributes to eutrophication, algal blooms, and the degradation of water quality. This creates stress on aquatic fauna, reduced aesthetic quality, odor, and limits of the water for usage of drinking, recreation, and industry. This research paper asks what the contributions of having access to manure application records, soil records, and information about antibiotics have on what is known about manure management and antibiotic resistance, which has been …

Seismic Anisotropy And Mantle Flow Beneath Africa And Arabia, Ahmed Abdalla Elsheikh

Doctoral Dissertations

"In spite of numerous studies, the mechanisms for the rifting, uplifting, and volcanism on the African plate remain enigmatic. The most popular hypotheses proposed for explaining these tectonic phenomena involve edge-driven small-scale mantle convection and the thermal or dynamic effects of one or more mantle plumes. In this study we use continental scale shear-wave splitting (SWS) measurements to provide additional constraints on the various models of rifting, uplifting, and volcanism of the Cameroon Volcanic Line (CVL) and the Arabian plate. The splitting of P-to-S converted phases at the core-mantle boundary on the receiver side (XKS including PKS, SKKS, and SKS) …

Crustal Thickness And Vp/Vs Beneath The Western United States: Constraints From Stacking Of Receiver Functions, Uranbaigal Purevsuren

Doctoral Dissertations

"This study investigates crustal characteristics beneath the western United States. Crustal parameters, including crustal thickness (H), mean Vp/Vs, and the sharpness of the Moho as quantified by the amplitude of the P-to-S converted phases from the Moho, are measured at a total of 1000 permanent and portable broadband seismic stations using over 150,000 receiver functions recorded between 1988 and 2012. The study area is composed of a diverse set of tectonic provinces formed by a series of tectonic events, and is thus ideal for investigating crustal formation and modification by different tectonic processes. The resulting crustal thickness varies from …

Calcite Dissolution Under Turbulent Flow Conditions: A Remaining Conundrum, Matthew D. Covington

Geosciences Faculty Publications and Presentations

A significant body of experimental and theoretical work has examined the dissolution rates of calcite, and other carbonate minerals, under varying chemical and hydrodynamic conditions (see Morse & Arvidson (2002) for a comprehensive review). The relationships derived from this work have been applied extensively to the development of mechanistic models of speleogenesis (e.g. Dreybrodt 1996; Dreybrodt et al. 2005; Birk et al. 2005; Rehrl et al. 2008; Kaufmann 2009; Szymczak & Ladd 2011). However, the primary focus of these models has been on the early stages of cave formation, with less attention toward the later stages of cave evolution and …

A Receiver Function Study Of Crust Thickness And Composition Beneath The Southwestern United States, Si Wu

Masters Theses

"Over the past decades, the seismic structure of the crust and upper mantle of the southwestern United States was examined using an array of different methods. The structure and composition of crust received special attentions, most due to the hydrocarbon reserves in this area. Here new constraints on crustal evolution and structure models are provide by systematically analyzing 37,402 receiver functions recorded at 234 seismic stations on the southwestern United States. The results reveal that the Transitional Crust is characterized by a thin (29.0±1.0 km) crust, a low Vp/Vs ratio of 1.76±0.016 and a high amplitude (R) of P-to-S converted …

A Remote Sensing Investigation Of Elevated Sub-Horizontal Topographic Surfaces In The Wichita Mountains, Oklahoma, Liang Xue

Masters Theses

"Multiple elevated horizontal to sub-horizontal topographic surfaces are present in the Wichita Mountains, Oklahoma. Elevated topographic surfaces, developed primarily on granite bedrock with gentle slopes of 0.5 to 7⁰,were investigated using 1) Digital Elevation Models (DEMs) extracted from NAD 27 UTM coordinates, 2) Google Earth imagery, and 3) USGS topographic maps. In the western Wichita Mountains prominent topographic surfaces at elevations of 720 ± 5 m, 685 ± 5 m, and 660 ± 5 m are well preserved on at least four different mountains (e.g., Solder's Peak, King Mt.) and can be correlated with similar surfaces on at least seven …

Pn Anisotropy Tomography Of The Colorado Plateau And Adjacent Areas, Shengyao Cheng

Masters Theses

"The Pn tomography method utilizes seismic waves that refract along the Moho interface to perform inversion in order to investigate velocity anomalies and seismic anisotropy in the uppermost mantle. Results from Pn tomography can provide important information about the composition, temperature, and tectonic processes beneath the study area. Over the past decades, numerous seismic and geologic studies have been conducted in the Colorado Plateau and its adjacent areas to reveal crustal and mantle structures and processes responsible for the diverse surface geological features and tectonic events that have occurred in this area. To investigate lateral variations in the uppermost mantle …

Shear-Wave Splitting And Mantle Deformation Beneath The Western Tibetan Plateau, Melissa Ann Ray

Masters Theses

"The Tibetan Plateau has been an enigma to the scientific community since scientists first began to focus their attention on the area. Numerous studies over the decades were conducted to address how the plateau formed, mostly in the central and eastern portions of the Tibetan Plateau. Many questions still remain regarding the western Tibetan Plateau, and this study will add constraints to the mechanisms which regulated the formation of the plateau.

Data was acquired from over 13,000 measurements from 172 stations covering the western region of the plateau encompassing the Qiangtang Terrane, the Lhasa Terrane, and the Himalayan Orogenic Zone. …

An Investigation Of Contaminant Metal Distribution And Mineral Speciation In The Soil Near The Buick Recycling Division Smelter, Iron County, Missouri, Krista Nicole Rybacki

Masters Theses

"Trace metal contamination studies were conducted near the Buick Resource Recycling Division. This study used sequential extraction, total digestion, X-Ray Diffraction (XRD), and Scanning Electron Microscopy-Energy Dispersive Spectroscopy (SEM-EDS) to study trace metals in two soil cores. Sequential extraction analysis of the soil cores revealed that lead was associated with either iron or manganese oxides. Zinc and copper were bound to soil components, extracted mainly from organics, sulfides, and clays. Total digestion results compared favorably to the sum of the sequential extraction results for lead, thus validating the sequential extraction methodology. The highest concentration observed for lead was 4,743 parts …

Eclogites And Eclogites: Oxygen Isotope Evidence Of A Shared Subduction Origin For Franciscan Eclogites And Moses Rock Eclogite Xenoliths, William F. Hoover

Honors Papers

Eclogites can be found in two distinct tectonic settings in the western USA: in the Franciscan Complex as tectonic blocks in a fossil accretionary wedge, and in the Navajo Volcanic Field as xenoliths in diatremes. Intra-crystal oxygen isotope analyses of garnets from these two settings provide important information on the source, composition and timing of fluid interactions in both eclogite settings. Because of the well-documented relationship between Franciscan subduction and the volcanism in the Navajo Volcanic Field, the samples in this study can be directly compared to determine if they share a common origin. The Navajo eclogites in this study …