Biogeochemistry Commons^™

Identifying Controls On Surface Carbon Dioxide Efflux In A Semi-Arid Ecosystem, Katrina Elsie Ladd

Boise State University Theses and Dissertations

This study focused on soil respiration, the least constrained process in the terrestrial carbon cycle, and a source of uncertainty for model predicted ecosystem response to climate change. Respiration processes that make up soil respiration respond to environmental influencing factors, temperature, and moisture. Respiration responses vary by site, time of year, and also year to year, confounding determination of individual influence of the factors, making soil respiration difficult to model. This research took advantage of the climate characteristics of a semi-arid system, in order to observe soil temperature and moisture influence on soil respiration. Field measurements of soil surface CO …

Cellulosic Ethanol: The Benifits, Obstacles, And Implications For Nebraska, Cassidee Lin Thompson

Department of Environmental Studies: Undergraduate Student Theses

Abstract Ethanol is a biofuel that has unique capabilities to mitigate global climate change by reducing greenhouse gas emissions while simultaneously supporting rural economies and decreasing the United States’ dependence on foreign oil. Currently, the state of Nebraska depends on corn ethanol, which may be unsustainable. Cellulosic ethanol is a promising alternative but it is not without its problems, including high production costs and potential environmental damage. This thesis is an attempt to understand the benefits, downfalls, and processes of corn-based and cellulosic ethanol and the potential implications to Nebraska. This research should shed some light on the current obstacles …

Ip25: A Molecular Proxy Of Sea-Ice Duration In The Bering And Chukchi Seas, Cecily J. Sharko

Masters Theses 1911 - February 2014

Seasonal sea ice is an important component of the global climate system. Sea ice influences exchange rates of heat, moisture, and gas between the ocean and atmosphere. Sea ice also plays critical roles in high latitude ecosystems and marine carbon cycling. Records of sea-ice extent and duration in the Arctic Ocean and its marginal seas through geologic time are valuable resources for better understanding the intricate relationships between sea ice and climate.

IP25, a compound biosynthesized exclusively by diatoms associated with sea ice, has been used to construct qualitative records of sea ice from sediment cores in some areas of …

The Distribution, Composition, And Formation Of Sahara Desert Microbialites From The Base Of The Meski Plateau, Outside Erfoud, Morocco, Sean Faulkner

Masters Theses 1911 - February 2014

Seven distinctly different museum-quality concretionary morphotypes of elongate, spheroidal, banded, botryoidal, columnar, rosette, and speleothem in regolith at two small sites at the base of the Meski Plateau near Erfoud, Morocco are described. Although most are isolated hand samples, the largest concretions are meter-sized blocks. Not one sample resembles any surrounding outcrop or bedrock. The barite rosettes formed first via periodic mixing of Ba2+/SO42- saturated solutions. They provided nuclei for cyclical precipitation-based concentric concretion development. The speleothem formed via precipitation from a carbonate-saturated solution in a large void within porous sandstone. The sand concretions formed when calcite precipitated around grains …

Exploring Isotopic Signatures Of Lake El'gygytgyn Sediments For Evidence Of Anoxia And Methane Cycling Over The Past 50,000 Years, Addie R. Holland

Masters Theses 1911 - February 2014

Compound specific isotope analysis of lake sediments is a powerful tool in deciphering evidence of changing climatic and paleoenvironmental conditions through time. Isotopic analysis of Lake El’gygytgyn pilot sediment cores, PG1351 and LZ1029, have contributed increased insight into paleoenvironmental interpretations regarding conditions of permanent ice cover and water column anoxia at the lake over the past 250 kyr. Bulk sediment δ15N was measured as a proxy for denitrification and a possible indicator for water column anoxia intensity. However, it appears that insufficient quantities of water column nitrate to fuel denitrification make its correlation with anoxia intensity ineffective. In pilot core …

The Rhizosphere: A Synchrotron- Based View Of Nutrient Flow In The Root Zone, Theodore K. Raab, David A. Lipson

Ted K. Raab

At two energy “endpoints” of the EM spectrum accessible to synchrotron biologists (IR radiation and soft X-rays), we have found experimental methods providing unique opportunities to observe processes and test hypotheses essential to understanding plantsoil- microbe interactions. Availability of IR synchrotron beamlines will continue to expand worldwide, and we hope that plant and microbial biologists will incorporate the type of spectral data presented in this chapter as just one of a legion of “-omics” methods. Considering the shear flux of C through belowground ecosystems annually (and how poorly constrained they are in many regions), synchrotrons must continue to demand the …

Meta-Analysis Of Fertilization Experiments Indicates Multiple Limiting Nutrients In Northeastern Deciduous Forests, Matthew A. Vadeboncoeur

Matthew A Vadeboncoeur

It is widely accepted that N limits primary production in temperate forests, although colimitation by N and P has also been suggested, and on some soils, Ca and base cations are in short supply. I conducted a meta-analysis to assess the strength of existing experimental evidence for limitation of primary production by N, P, and Ca in hardwood forests of the northeastern United States and southeastern Canada using data from 35 fertilization experiments in deciduous forests on glaciated soils across the region.

There is strong evidence for N limitation (formal meta-analysis weighted mean response ratio = 1.51, p < 0.01; simple mean = 1.42, p < 0.001). Forest productivity also tended to increase with additions of P (simple mean = 1.15, p = 0.05) and Ca (simple mean = 1.36, p < 0.001). Across all treatments, 85% of response ratios were positive. Multiple-element additions had larger effects than single elements, but factorial experiments showed little evidence of synergistic effects between nutrient additions. Production responses correlated positively with the rate of N fertilization, but this effect was reduced at high rates of ambient N deposition.

Apparent Seasonal Cycle In Isotopic Discrimination Of Carbon In The Atmosphere And Biosphere Due To Vapor Pressure Deficit, Ashley P. Ballantyne, J. B. Miller, P. P. Tans

Ecosystem and Conservation Sciences Faculty Publications

We explore seasonal variability in isotopic fractionation by analyzing observational data from the atmosphere and the biosphere, as well as simulated data from a global model. Using simulated values of atmospheric CO₂ and its carbon isotopic composition, we evaluated different methods for specifying background concentrations when calculating the isotopic signature of source CO₂ (δ_s) to the atmosphere. Based on this evaluation, we determined that free troposphere measurements should be used when available as a background reference when calculating δ_s from boundary layer observations. We then estimate the seasonal distribution of δ_s from monthly …

Copper Isotope Fractionation During Surface Adsorption And Intracellular Incorporation By Bacteria, Jesica Urbina Navarrete

Open Access Theses & Dissertations

Copper isotopes may prove to be a useful tool for investigating bacteria-metal interactions recorded in natural waters, soils, and rocks. However, experimental data that constrain Cu isotope fractionation in biologic systems are limited and unclear. In this study we utilized Cu isotopes (65Cu) as a tool to investigate Cu-bacteria interactions, including surface adsorption and intracellular incorporation. Experiments were conducted with individual Gram-positive (Bacillus subtilis) and Gram-negative (Escherichia coli) bacterial species as well as with bacterial consortia from several natural environments. Adsorption experiments were conducted with live or dead cells over the pH range 2.5 to 6. Surface adsorption of Cu …

A Seasonal Study Of Dissolved Cobalt In The Ross Sea, Antarctica: Micronutrient Behavior, Absence Of Scavenging, And Relationships With Zd, Cd, And P., M. A. Saito, T. J. Goepfert, A. E. Noble, E. M. Bertrand, Peter N. Sedwick, Giacomo R. Ditullio

OES Faculty Publications

We report the distribution of cobalt (Co) in the Ross Sea polynya during austral summer 2005-2006 and the following austral spring 2006. The vertical distribution of total dissolved Co (dCo) was similar to soluble reactive phosphate (PO(4)(3-)), with dCo and PO(4)(3-) showing a significant correlation throughout the water column (r(2) = 0.87, 164 samples). A strong seasonal signal for dCo was observed, with most spring samples having concentrations ranging from similar to ~ 45-85 pM, whereas summer dCo values were depleted below these levels by biological activity. Surface transect data from the summer cruise revealed concentrations at the low range …

Variations In Synechococcus Cell Quotas Of Phosphorus, Sulfur, Manganese, Iron, Nickel, And Zinc Within Mesoscale Eddies In The Sargasso Sea, Benjamin S. Twining, Daliangelis Nunez-Milland, Stefan Vogt, Rodney S. Johnson, Peter N. Sedwick

OES Faculty Publications

The quotas of P, S, Mn, Fe, Ni, and Zn in individual Synechococcus cells collected from the surface and deep chlorophyll maximum (DCM) layer of three mesoscale eddies in the Sargasso Sea were measured using synchrotron X-ray fluorescence microscopy. Cells in a mode-water eddy had significantly higher P (57 +/- 10 amol) and Mn (28 +/- 7 zmol) cell quotas than cells collected from a cyclone (22 +/- 2 amol and 10 +/- 1 zmol, respectively) or anticyclone (25 +/- 3 amol and 18 +/- 3 zmol, respectively). Conversely, Ni and Zn quotas were significantly higher in the cells from …

Carbon Dioxide Exchange In A Permafrost-Dominated Boreal Wetland In The Northwest Territories, Canada, Andrea J. Kenward

Theses and Dissertations (Comprehensive)

Northern boreal wetland complexes are substantial reservoirs for carbon and play a crucial role in both regional and global carbon budgets but they are showing significant signs of impact by climate change. This study examined the carbon dioxide flux of a high boreal wetland during the snowmelt and growing season of 2008 in Scotty Creek Basin, located near Fort Simpson (61°18'N, 121°18'W), Northwest Territories. This basin is not only responding to shifts in atmospheric temperatures, but it is also under additional pressure from increasing permafrost degradation. A dynamic closed-system chamber was used to monitor and quantify mid-day total respiration (R …

The Role Of Copepods And Heterotrophic Dinoflagellates In The Production Of Dissolved Organic Matter And Inorganic Nutrients, Grace Kathleen Saba

Dissertations, Theses, and Masters Projects

Zooplankton play a key role in the cycling of dissolved organic matter (DOM) and inorganic nutrients. The factors that affect these processes, however, are not fully understood. I measured the effects of various diets on DOM and inorganic nutrient production by the copepod Acartia tonsa and the heterotrophic dinoflagellate Oxyrrhis marina, and explored the mechanisms of nutrient release from copepods. Copepods feeding on a mixed diet, the preferred diet of most copepods, had significantly lower dissolved organic carbon (DOC), ammonium (NH4+), and total dissolved nitrogen (TDN) release rates compared to feeding on a carnivorous or herbivorous diet. Thus, copepod feeding …

Temporal And Spatial Variations In Freshwater 14C Reservoir Effects: Lake Mývatn, Northern Iceland, Philippa L. Ascough, G. T. Cook, M. J. Church, E. Dunbar, Á. Einarsson, Thomas H. Mcgovern, A. J. Dugmore, Sophia Perdikaris, H. Hastie, A. Friðriksson, H. Gestsdóttir

School of Global Integrative Studies: Faculty Publications

Lake Mývatn is an interior highland lake in northern Iceland that forms a unique ecosystem of international scientific importance and is surrounded by a landscape rich in archaeological and paleoenvironmental sites. A significant freshwater reservoir effect (FRE) has been identified in carbon from the lake at some Viking (about AD 870–1000) archaeological sites in the wider region (Mývatnssveit). Previous accelerator mass spectrometry (AMS) measurements indicated this FRE was about 1500–1900 ¹⁴C yr. Here, we present the results of a study using stable isotope and ¹⁴C measurements to quantify the Mývatn FRE for both the Viking and modern periods. …

On The Fractional Solubillity Of Copper In Marine Aerosols: Toxicity Of Aeolian Copper Revisited, Edward R. Sholkovitz, Peter N. Sedwick, Thomas M. Church

OES Faculty Publications

Paytan et al. (2009) argue that the atmospheric deposition of aerosols lead to copper concentrations that are potentially toxic to marine phytoplankton in a large area of tropical and subtropical North Atlantic Ocean. A key assumption in their model is that all marine aerosols (mineral dust and anthropogenic particles) have a high (40%) fractional solubility of copper. Our data show that the fractional solubility of copper for Saharan dust over the Sargasso Sea and Bermuda is significantly lower (1-7%). In contrast, anthropogenic aerosols with non-Saharan sources have significantly higher values (10-100%). Hence, the potential Cu toxicity in the tropical and …

The Widespread Occurrence Of Coupled Carbonate Dissolution/Reprecipitation In Surface Sediments On The Bahamas Bank, David J. Burdige, Xinping Hu, Richard C. Zimmerman

OES Faculty Publications

Using two complimentary approaches (pore water advection/diffusion/reaction modeling and stable isotope mass balance calculations) we show that carbonate dissolution/reprecipitation occurs on early diagenetic time scales across a broad range of sediments on the Great Bahamas Bank. The input of oxygen into the sediments, which strongly controls sediment carbonate dissolution, has two major sources belowground input by seagrasses (that is, seagrass O₂ pumping), and permeability-driven advective pore water exchange. The relative importance of these O₂ delivery mechanisms depends on both seagrass density, and on how bottom water flow interacts with the seagrass canopy and leads to this advective exchange. …

Temporal Controls On Dissolved Organic Matter And Lignin Biogeochemistry In A Pristine Tropical River, Democratic Republic Of Congo, Robert G. M. Spencer, Peter J. Hernes, Rosmarie Ruf, Andy Baker, Rachael Y. Dyda, Aron Stubbins, Johan Six

Chemistry & Biochemistry Faculty Publications

Dissolved organic carbon (DOC), lignin biomarkers, and the optical properties of dissolved organic matter (DOM) were measured in the Epulu River (northeast Democratic Republic of Congo) with the aim of investigating temporal controls on the quantity and chemical composition of DOM in a tropical rainforest river. Three different periods defined by stages of the hydrologic regime of the region, (1) post dry flushing period, (2) intermediary period, and (3) start of the dry period/post flush, were sampled. Temporal variability in DOM quantity and quality was observed with highest DOC, lignin concentration (Σ₈) and carbon‐normalized (Λ₈) values …

Trace Metal Biogeochemistry In The Western North Pacific, Peter Lynn Morton

OES Theses and Dissertations

Dissolved and suspended particulate samples collected during the Intergovernmental Oceanographic Commission 2002 Contaminant Baseline Survey were analyzed to determine the surface and vertical distributions of Cd, Co, Cu, Mn, Ni Zn and Pb across the western and central North Pacific.

Dissolved trace metal concentrations were measured using a novel isotope dilution-ICP-MS method after extraction over an 8-hydroxyquinoline resin column and validated through the use of the SAFe consensus reference materials. Filtered suspended particulate matter was digested using an HCl/HNO3/HF mixture and analyzed by HR-ICP-MS to obtain total particulate concentrations for the trace metals and other tracer elements such as Al, …

Concentrations, Distributions And Chemical Speciation Of Zinc And Cadmium In The Equatorial And South Atlantic Ocean, Gonzalo G. Carrasco

OES Theses and Dissertations

Certain trace metals are important cofactors in enzymatic systems and are thus, essential for life in the world's oceans. Two of these metals, Zn and Cd, are required by phytoplankton for enzymes that facilitate carbon uptake (Morel and Price, 2003). In seawater the total dissolved concentration of a metal (MTD) is distributed among different chemical species and this chemical speciation dictates a metal's bioavailability. Strong organic metal-binding ligands greatly affect the metal's chemical speciation in the ocean, potentially limiting phytoplankton growth by reducing the concentrations of Zn²⁺ and Cd²⁺, the bioavailable forms of these two metals to …