Oceanography and Atmospheric Sciences and Meteorology Commons^™

A Model Framework For Predicting Reef Fish Distributions Across The Seascape Using Gis Topographic Metrics And Benthic Habitat Associations, Brian K. Walker

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Increased topographic complexity has been linked to increased species diversity and/or abundance in many ecological communities, including coral reefs. Several topographic metrics can be measured remotely in GIS using high resolution bathymetry, including elevation, surface rugosity, and seafloor volume within specified areas. Statistical relationships between these data and organismal distributions within mapped habitats can be used to make predictions across the entire bathymetric dataset. In this study a model framework is presented which utilizes statistically significant relationships between reef fish abundance and species richness and GIS topographic complexity measurements for samples within similar benthic habitats to create GIS-based prediction maps …

Genetic Connectivity In The Branching Vase Sponge (Callyspongia Vaginalis) Across The Florida Reef Tract And Caribbean, Melissa B. Debiasse, Vincent P. Richards, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Porifera constitute a substantial fraction of the biomass on coral reefs and frequently have higher species diversity than corals and algae, making this phylum an important model for the investigation of reef connectivity. We examined genetic connectivity in the common branching vase sponge, Callyspongia vaginalis, by analyzing DNA sequence variation in 511 bp of the mitochondrial cytochrome oxidase I (COI) gene in 401 individuals sampled from 16 locations throughout the Florida reef tract and Caribbean. Populations of Callyspongia vaginalis were highly genetically structured over the study area (ΦST = 0.48, P < 0.0001), including over distances as short as tens of kilometers within the Florida reef tract, and had a significant overall pattern of isolation by distance (P = 0.0002). However, nonsignificant pairwise ΦST values were also found between a few Florida sampling sites suggesting that long distance dispersal, perhaps by means of fragmentation, may occur over continuous, shallow coastlines. Indeed, sufficient gene flow appears to occur along the Florida reef tract to obscure a signal of isolation by distance (P = 0.164), but not to homogenize haplotype frequencies over 465 km from Palm Beach to the Dry Tortugas. Statistical parsimony analysis revealed two highly divergent haplotypes from Honduras suggestive of cryptic speciation. Inferences from a nested clade analysis supported the pattern of restricted gene flow and isolation by distance in the Caribbean, and suggested a northward range extension of C. vaginalis from a hypothesized Central American …

Contrasting Patterns Of Population Structure And Dispersal For The Giant Barrel Sponge (Xestospongia Muta) Within The Florida Reef Tract And Caribbean, Vincent P. Richards, Kevin A. Feldheim, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Sponges are one of the dominant fauna on Florida and Caribbean reefs, with species diversity often exceeding that of scleractinian corals. Despite their importance as structural components and habitat providers on reefs, their dispersal dynamics are little understood. We utilized eight microsatellite markers to study the population structure and migration patterns of the giant barrel sponge (Xestospongia muta), a widespread species throughout Florida and the Caribbean. Bayesian multilocus genotype analyses clustered 157 samples from the Bahamas, Honduras, and the US Virgin Islands into three distinct groups. 159 samples from nine locations within 284 km of the Florida reef …

Coral Ultrastructural Response To Elevated Pco2 And Nutrients During Tissue Repair And Regeneration, Dorothy-Ellen A. Renegar, Patricia Blackwelder, Alison L. Moulding

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Corals and coral reefs have recently experienced widespread decline attributed to anthropogenic pressure on reef systems. Studies have demonstrated that nutrient and pCO₂ stress effect coral growth and calcification, but study of specific effects on coral tissue is lacking. The objective of this research was to examine wound healing in corals and how it is affected by exposure to elevated nutrients and pCO₂. Coral tissue repair and regeneration during wound healing in Montastraea cavernosa and Porites astreoides were assessed histologically and ultrastructurally by examining colony fragments exposed to elevated nitrate, phosphate, and pCO₂. In M. …

Stony Coral Species Diversity And Cover In The Florida Keys Using Design-Based Sampling, Leanne M. Rutten, Mark Chiappone, Dione W. Swanson, Steven Miller

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Large-scale sampling of stony coral species richness, species distribution, and cover was undertaken at 423 Florida Keys sites between Miami and SW of Key West during 2005 and 2007. A two-stage, stratified random sampling design employed belt transects to enumerate numbers of species and point-intercept surveys to quantify cover. The sampling design incorporated ten reef and hard-bottom habitats from < 1 m to 27 m depth, as well as oceanographic regions and areas inside and outside of protected management zones. These data provide insights into the spatial extent and factors influencing stony coral biodiversity. For stony corals, a pool of ~50 taxa encompassing the Orders Milleporina and Scleractinia, including species and morphotypes, was recorded. Significant differences were found in species richness and cover among cross-shelf habitats, with great values on inner shelf margin patch reefs, followed by deeper fore-reef slope habitats that extended to the 27 m depth limit sampled. In contrast, the shallow fore-reef, especially in areas historically dominated by the branching coral Acropora palmata, yielded relatively low numbers of species and cover that are presently dominated by smaller, brooding corals such as Porites astreoides and Favia fragum.

Sfa Weather Station-July 2008, Arthur Temple College Of Forestry And Agriculture, Stephen F. Austin State University

Weather Station Data

No abstract provided.

Population Structure In The Brown Tube Sponge (Agelas Conifera) In The Florida Reef Tract And Caribbean, Jennifer M. Hester, Vincent P. Richards, Kevin Feldheim, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Sponges are broadly distributed, occur in a wide range of habitats, and comprise a substantial amount of the biomass and macro-biodiversity on coral reefs. Despite their ubiquity in reef ecosystems, their dispersal dynamics are largely unknown. Here we report on gene flow and population structure for the common brown tube sponge, Agelas conifera (Demospongiae, Poecilosclerida) in the Florida reef tract and Caribbean. Over 300 samples collected from ten geographically distinct locations throughout Florida and the Caribbean are being analyzed for variation at eight microsatellite loci. Preliminary results from screening four loci in 295 individuals from eight locations indicated significant population …

Population Status Of Acropora Corals In The Florida Keys, Steven Miller, Mark Chiappone, Leanne M. Rutten, Dione W. Swanson

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Population declines of staghorn coral (Acropora cervicornis) and elkhorn coral (A. palmata) are often-cited examples of Caribbean reef change since the 1970s, due, in part, to disease and localized effects from storms and predation. Both corals were listed as threatened on the U.S. Endangered Species List based upon range-wide decline and poor recovery. A spatially intensive survey undertaken in the Florida Keys of Acropora corals quantified habitat distribution, colony abundance, size, and condition at 235 sites spanning over 200 km in 2007. A two-stage stratified sampling design using belt transects incorporated cross-shelf habitats and no-fishing management …

Population Genetic Structure Of A Coral Reef Ecosystem Apex Predator, The Gray Reef Shark (Carcharhinus Amblyrhynchos), Rebekah L. Horn, William Robbins, Douglas Mccauley, Philip Lobel, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Sharks play a major functional role as apex predators in coral reef ecosystems, raising concerns that their ongoing overexploitation will compromise the integrity and sustainability of reefs. The gray reef shark (Carcharhinus amblyrhynchos) is a strongly coral reef associated species whose populations are known to have declined substantially in some regions. There is no information on population structure in this species to aid in their management and conservation. We are assessing genetic structure in this species by using entire mitochondrial control region sequences and 15 nuclear microsatellite loci as markers. 93 gray reef shark samples were obtained from …

Ultrastructural And Histological Analysis Of Dark Spot Syndrome In Siderastrea Siderea And Agaricia Agaricites, Dorothy-Ellen A. Renegar, Patricia Blackwelder, J. D. Miller, D. J. Gochfeld, Alison L. Moulding

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Dark Spot Syndrome (DSS) typically manifests in scleractinian corals as lesions of varying color, size, shape and location that can result in skeletal changes and tissue death. A causative agent for DSS has not yet been identified. The objective of this study was histological and ultrastructural comparison of the cellular and skeletal characteristics of DSS-affected and healthy Siderastrea siderea and Agaricia agaricites. The greater resolution possible with transmission electron microscopy (TEM) revealed microbial activity and tissue changes not resolvable utilizing histology. DSS-affected tissue had less integrity, with increasing cellular degradation and vacuolization. A high concentration of electron dense inclusions, …

Recovery Of Injured Giant Barrel Sponges, Xestospongia Muta, Offshore Southeast Florida, David S. Gilliam, Brian K. Walker, S. J. Saelens, Daniel P. Fahy, Vladimir N. Kosmynin

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Giant barrel sponges, Xestospongia muta, are abundant and important components of the southeast Florida reef system, and are frequently injured from anthropogenic and natural disturbances. There is limited information on the capacity of X. muta to recover from injury and on methods to reattach X. muta fragments. In late 2002, hundreds of barrel sponges offshore southeast Florida (Broward County) were accidentally injured during an authorized dredging operation. In early 2003, two to three months post-injury, 93% of 656 assessed injured sponges appeared to be recovering. In 2006, three years post-injury, nearly 90% of 114 monitored sponges continued to show …

A Tale Of Germs, Storms, And Bombs: Geomorphology And Coral Assemblage Structure At Vieques (Puerto Rico) Compared To St. Croix (U.S. Virgin Islands), Bernhard Riegl, Ryan P. Moyer, Brian K. Walker, Kevin E. Kohler, David S. Gilliam, Richard E. Dodge

Marine & Environmental Sciences Faculty Articles

The former U.S. Navy range at Vieques Island (Puerto Rico, United States) is now the largest national wildlife refuge in the Caribbean. We investigated the geomorphology and benthic assemblage structure to understand the status of the coral reefs. Coral assemblages were quantified at 24 sites at Vieques and at 6 sites at St. Croix, U.S. Virgin Islands. These sites were chosen to represent the major zones of reef geomorphology. Sites consisted of two or three 21-m-long photo-quadrate belt transects. The results revealed surprisingly little differentiation in the coral assemblages within and between reefs of comparable geomorphological and oceanographic setting at …

Simultaneous Measurements Of Particulate And Gas-Phase Water-Soluble Organic Carbon Concentrations At Remote And Urban-Influenced Locations, C Anderson, Jack E. Dibb, Robert J. Griffin, M Bergin

Earth Sciences

The sources, sinks, and overall importance of watersoluble organic carbon (WSOC) in the atmosphere are not well understood. Although the primary historical focus has been on particulate WSOC (WSOCP), here we also present results obtained using a newly developed technique that additionally measures gas-phase water-soluble organic carbon (WSOCG). These first-of-their-kind measurements show that WSOCG can often be more than ten times larger than WSOCP at both urban and remote locations. The average fraction of WSOC residing in the gas phase (fg = WSOCG/(WSOCG + WSOCP)) at five various field sites ranged from 0.64 to 0.93, implying significant differences in WSOC …

Scleractinian Coral Recruitment To Reefs Physically Damaged By Ship Groundings, E. T. Rubin, Alison L. Moulding, Jose V. Lopez, David S. Gilliam, V. N. Kosmynin, Richard E. Dodge

Marine & Environmental Sciences Faculty Articles

The southeast Florida reef system faces a number of stress factors, among which ship groundings are one of the most physically damaging. Portions of the Florida reef tract located near Port Everglades, Broward County, Florida, USA have been damaged by ship groundings. In 2004, physical damage of more than 30,000 m² was caused by the groundings of two large cargo ships, the MV Eastwind and MV Federal Pescadores. The present study was designed to measure differences of scleractinian coral recruitment patterns (recruit diversity and richness) and rates to these injured sites in comparison to undamaged reef sites. Coral …

Comparison Of Bacterial Diversity Within The Coral Reef Sponge, Axinella Corrugata, And The Encrusting Coral Erythropodium Caribaeorum, Jose V. Lopez, L. K. Ranzer, A. Ledger, B. Schoch, A. Duckworth, P. J. Mccarthy, R. G. Kerr

Marine & Environmental Sciences Faculty Articles

We compared the Caribbean reef sponge, Axinella corrugata, with the Caribbean reef coral, Erythropodium caribaeorum for differences in their resident microbial communities. This cursory survey of bacterial diversity applied 16S rRNA gene sequences. Over 100 culture-independent sequences were generated from five different Axinella 16S rRNA libraries, and compared with 69 cultured isolates. The cultureindependent 16S rDNA clones displayed a higher diversity of Proteobacteria, including “uncultured” or “unknown” representatives from the Deltaproteobacteria. Arcobacterium, and Cyanobacteria were also found. We have also confirmed that Axinella sponges appeared to host specific microbial symbionts, similar to the previously identified clones termed “OSO” …

Droughtscape, Summer 2008, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

VegDRI Expands West

Spring Rains Ease Drought But CA Still Dry

Scholar Donates Books

NDMC Welcomes Employees Bathke, Nothwehr

Latest Workshop Info Up

State Lawmakers to Focus on Drought Planning

Decadal Variation -- Clues to Droughts and Floods?

11th International Coral Reef Symposium Proceedings, Bernhard Riegl (Editor), Richard E. Dodge (Editor)

ICRS Conference Proceedings

A defining theme of the 11^th International Coral Reef Symposium was that the news for coral reef ecosystems are far from encouraging. Climate change happens now much faster than in an ice-age transition, and coral reefs continue to suffer fever-high temperatures as well as sour ocean conditions. Corals may be falling behind, and there appears to be no special silver bullet remedy. Nevertheless, there are hopeful signs that we should not despair.

Reef ecosystems respond vigorously to protective measures and alleviation of stress. For concerned scientists, managers, conservationists, stakeholders, students, and citizens, there is a great role to play …

11th International Coral Reef Symposium Abstracts, Bernhard Riegl (Editor), Richard E. Dodge (Editor)

ICRS Conference Proceedings

No abstract provided.

Lsuhsc Facilities Daily Update: July 2008, Lsuhsc Property And Facilities Management

LSUHSC Facilities Daily Updates: 2008

LSUHSC Dailly Facilities Updates from July 2008. These updates describe damage and a timeline of repairs at the LSU Health Sciences Center - New Orleans campus due to Hurricane Katrina which made landfall August 29, 2005.

Lsuhsc Facilities Biweekly Update: July 2008, Lsuhsc Property And Facilities Management

LSUHSC Facilities Biweekly Updates: 2008

LSUHSC Facilities Biweekly Updates from July 3 and 18, 2006.

These updates describe damage and a timeline of repairs at the LSU Health Sciences Center - New Orleans campus due to Hurricane Katrina which made landfall August 29, 2005.

Very Shallow Water Bathymetry Retrieval From Hyperspectral Imagery At The Virginia Coast Reserve (Vcr'07) Multi-Sensor Campaign, Charles M. Bachmann, Marcos J. Montes, Robert A. Fusina, Christopher Parrish, Jon Sellars, Alan Weidemann, Wesley Goode, C Reid Nichols, Patrick Woodward, Kevin Mcilhany, Victoria Hill, Richard Zimmerman, Daniel Korwan, Barry Truitt, A. Schwarzschild

Center for Coastal and Ocean Mapping

A number of institutions, including the Naval Research Laboratory (NRL), have developed look up tables for remote retrieval of bathymetry and in-water optical properties from hyperspectral imagery (HSI) [6]. For bathymetry retrieval, the lower limit is the very shallow water case (here defined as < 2m), a depth zone which is not well resolved by many existing bathymetric LIDAR sensors, such as SHOALS [4]. The ability to rapidly model these shallow water depths from HSI directly has potential benefits for combined HSI/LIDAR systems such as the Compact Hydrographic Airborne Rapid Total Survey (CHARTS) [10]. In this study, we focused on the validation of a near infra-red feature, corresponding to a local minimum in absorption (and therefore a local peak in reflectance), which can be correlated directly to bathymetry with a high degree of confidence. Compared to other VNIR wavelengths, this particular near-IR feature corresponds to a peak in the correlation with depth in this very shallow water regime, and this is a spectral range where reflectance depends primarily on water depth (water absorption) and bottom type, with suspended constituents playing a secondary role.

Analysis Of Aircraft And Satellite Measurements From The Intercontinental Chemical Transport Experiment (Intex-B) To Quantify Long-Range Transport Of East Asian Sulfur To Canada, Aaron Van Donkelaar, R V. Martin, W R. Leaitch, A M. Macdonald, T W. Walker, David G. Streets, Q Zhang, E J. Dunlea, Jose L. Jimenez, Jack E. Dibb, L Gregory Huey, Rodney J. Weber, M O. Andreae

Earth Sciences

We interpret a suite of satellite, aircraft, and ground-based measurements over the North Pacific Ocean and western North America during April–May 2006 as part of the Intercontinental Chemical Transport Experiment Phase B (INTEX-B) campaign to understand the implications of long-range transport of East Asian emissions to North America. The Canadian component of INTEX-B included 33 vertical profiles from a Cessna 207 aircraft equipped with an aerosol mass spectrometer. Long-range transport of organic aerosols was insignificant, contrary to expectations. Measured sulfate plumes in the free troposphere over British Columbia exceeded 2 μg/m3. We update the global anthropogenic emission inventory in a …

Hurricane Katrina, 2005 (Sc 1669), Manuscripts & Folklife Archives

Manuscript Collection Finding Aids

Finding aid only for Manuscripts Small Collection 1669. E-mails related to the personal and governmental response to Hurricane Katrina in Louisiana.

Slides: The Big Questions, Doug Kenney

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Doug Kenney, Natural Resources Law Center, University of Colorado Law School

7 slides

Slides: The Urbanizing West: Limits To Water, Limits To Growth, Lora A. Lucero

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Lora A. Lucero, AICP, American Planning Association

18 slides

Slides: Protecting Biodiversity Through Ecosystem Services, Barton "Buzz" Thompson

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Barton “Buzz” Thompson, Perry L. McCarty Director, Woods Institute for the Environment, Stanford University Law School

14 slides

Bridging The Governance Gap: Strategies To Integrate Water And Land Use Planning, Sarah Bates Van De Wetering, University Of Montana (Missoula). Public Policy Research Institute

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

16 pages.

Includes bibliographical references

"2007"

"Collaborative Governance Report 2"

Slides: Adapting Western Water Policy For Resilience Under Climate Change, Bonnie G. Colby

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Dr. Bonnie G. Colby, Professor of Resource Economics & Hydrology, University of Arizona Department of Agriculture & Resource Economics

22 slides

Slides: Linking Growth, Land Use And Water, Jim Holway

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Jim Holway, Global Institute of Sustainability, Civil and Environmental Engineering, Arizona Water Institute, Arizona State University

29 slides

Slides: Beyond Rethinking: Redoing Western Water Law, Janet Neuman

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Professor Janet Neuman, Lewis & Clark Law School

17 slides