Oceanography and Atmospheric Sciences and Meteorology Commons^™

Changes In Water Quality And Microbiota Over Two Years In Florida Hard Clam (Mercenaria Mercenaria) Hatcheries, Bonnie Getter

Electronic Theses and Dissertations

This thesis characterized the water quality and bacterial communities in nine hard clam hatcheries over two production years through weekly or biweekly water quality and chemistry monitoring, monthly bacterial plating in the second year of production, and select 16S microbiome sampling at select hatcheries to address production bottlenecks and support the reliable production of high-quality seed for Florida’s growing hard clam aquaculture industry. Logistic regression models showed that water source was distinguished by pH, salinity, alkalinity, and nitrite, whereas geographic location was distinguished by temperature, salinity, nitrate, and calcium; temperature, dissolved oxygen, salinity, and alkalinity distinguished seasons. Vibrio bacteria differed …

Modeling Water Quality And Cyanobacteria Blooms In St. Lucie Estuary, Florida, Mohmmad Masudur Rahman

Electronic Theses and Dissertations

The St. Lucie Estuary (SLE) on Florida’s east coast is vital for diverse aquatic life and provides essential services to local communities. However, the estuary’s health is threatened by water quality deterioration due to nutrient-driven phytoplankton blooms, particularly cyanobacteria, which have increased in frequency over recent decades. These blooms may worsen water quality by reducing dissolved oxygen, altering pH, and increasing turbidity. Moreover, some phytoplankton species, including Microcystis aeruginosa, a freshwater cyanobacteria species, produce harmful toxins, posing risks to both marine aquatic life and human health in this area. Primary nutrient sources in this estuary include watershed freshwater discharges, …

Biogeochemical Controls On Phosphorus Transport And Legacy Storage Across A Coastal Watershed, Lee Potter

LSU Doctoral Dissertations

Excess phosphorus (P) loading is a key driver of eutrophication and harmful algal blooms (HABs) in aquatic systems worldwide. This relationship is of increasing concern in coastal Louisiana, where climate variability, altered hydrology, and land-use change converge, resulting in increased hydrologic and nutrient loading into coastal systems. This dissertation examines controls on P cycling in the Lake Pontchartrain Basin through a multi-scale framework linking estuarine processes, watershed loading, climate and weather patterns, and sediment dynamics. The dissertation begins with an overview of the study region, P dynamics, and changes in hydrology and nutrient loading patterns. Chapter 2 presents a spatial …

Identifying Priorities To Guide Extension Water Quality Programming In Utah, Clare Entwistle, Sarah Erwin, Stephanie Vaughn

Outcomes and Impact Quarterly

Utah State University Extension water quality faculty conducted a statewide water quality needs assessment to identify priority contaminants and resource gaps. The results found that elevated nutrient levels and sedimentation were the top concerns where additional resources would be beneficial. In addition, insufficient funding for improvements and low public engagement were identified as key challenges in addressing water quality issues. Results revealed current unmet needs with regional variation to inform Extension resource allocation and programming.

Chesapeake Bay Water Clarity: Challenges And Successes, Jessica S. Turner, Carl T. Friedrichs, David B. Parrish, Kelsey A. Fall

OES Faculty Publications

The Chesapeake Bay is a large estuarine system spanning multiple jurisdictions and serves as a model for estuarine health worldwide. Historically, nutrient loading degraded water quality, prompting the need for regulation. Water clarity, one component of water quality, is vital for benthic communities and serves as a key indicator of overall ecosystem health. Here, physical resuspension and salinity gradients, nutrient and sediment inputs, production of organic detritus by phytoplankton, and benthic communities all interact to drive clarity patterns, with high spatial variability. Trends over the last 50 years show improvement, though with a temporary increase in organic detritus in response …

Unintended Consequences Of Estuarine Management Within The Trajectory Of Recovery: Examples From The Chesapeake Bay, Jessica S. Turner, Fei Da, Molly M. Mitchell

OES Faculty Publications

Estuaries are vital ecosystems that support biodiversity, human populations, and economic activities such as fisheries, aquaculture, and tourism. Managing estuarine systems often involves interventions to regulate sediment and nutrient inputs with the goal of improving water quality, and subsequently the economic values of the estuary. However, these management strategies can produce unintended consequences. The Chesapeake Bay is an estuary recovering from eutrophication which provides clear case studies for these patterns. In the Chesapeake Bay, decreased sediment inputs, resulting from shoreline stabilization and watershed modifications, can impair marsh resilience to sea level rise and disrupt sediment-light-algal interactions affecting water clarity. Likewise, …

A Geospatial Assessment Of Groundwater Salinization In A Multi-Aquifer System: Durango, Mexico, Juan Lopez-Sierra

Graduate Theses/Dissertations

Groundwater salinization poses a critical environmental concern for water resource sustainability in arid and semi-arid regions. This study evaluates spatial and temporal patterns of groundwater salinity across the state of Durango, Mexico, using total dissolved solids (TDS), sodium adsorption ratio (SAR), as salinity indicators and nitrate-nitrogen (NO₃–N) as an anthropogenic indicator. Groundwater quality data were obtained from (CONAGUA), a Mexican water agency. To assess salinity variations with respect to time, while minimizing interannual sampling bias, two multi-year sampling periods were selected: 2012-2013, and 2020-2021. Final datasets consisted of 122 wells for 2012–2013 and 131 wells for 2020–2021. The wells were …

Effects Of Climate Change On River And Groundwater Nutrient Inputs To The Coastal Ocean, Christina M. Richardson, Bernhard Peucker-Ehrenbrink, Shea Wyatt, Annie Bourbonnais, Vanessa Hatje, Claudia Frey, Tina Sanders, Diana E. Varela, Adina Paytan

Faculty Publications

Rivers and groundwater are major sources of nutrients to the global coastal ocean. Climate change is expected to impact nutrient fluxes from river basins and coastal aquifers through alterations to both hydrological and nutrient cycling processes. In this Review, we identify and summarize how climate change impacts, such as changes in precipitation, increased cryosphere melt, and sea level rise, will affect water discharge and nutrient concentrations in rivers and coastal groundwater, which ultimately control nutrient inputs to the coastal ocean. We also document key limitations in the current understanding of climate-related changes to nutrient fluxes, especially in coastal groundwater basins. …

Innovative Machine Learning, Isotopic, And Hydrogeochemical Techniques For Groundwater Analysis In Arid Landscapes In Egypt’S Eastern Desert, Saad Ahmed Mohallel, Hesham Morgan, Ali Elgendy, Surendra Maharjan, Shahryar Fazli, Wenzhao Li, Rejoice Thomas, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

Groundwater serves as a lifeline in Egypt’s hyper-arid Eastern Desert, particularly for agricultural and domestic uses. However, a comprehensive understanding of groundwater origin, quality, and recharge dynamics in the region remains limited due to geological complexity, data scarcity, and the high cost of isotopic analysis. This study addresses these challenges by integrating stable isotopes (δ¹⁸O and δ²H), hydrogeochemical parameters, remote sensing, and explainable artificial intelligence (AI) to investigate groundwater dynamics and support sustainable water management strategies. A total of 34 groundwater samples were collected from three key aquifers: the Quaternary alluvium, Nubian Sandstone, and fractured Basement aquifers. Hydrochemical analyses and …

Urbanization Impacts Dissolved Organic Matter Concentration And Quality In A Southeastern United States Watershed, Gwendolyn M. Hopper, Erik M. Smith, Jade Dormoy-Boulanger, Claudia R. Benitez-Nelson

Faculty Publications

Blackwater rivers are named due to their exceptionally high concentrations of chromophoric dissolved organic matter (CDOM). They are the predominant lotic ecosystem in the United States Southeastern Coastal Plain, a region experiencing some of the nation’s highest rates of development. This study assessed variability in DOM concentration and composition across forested to urbanized blackwater systems in coastal South Carolina, U.S. Dissolved organic carbon and nutrient concentrations as well as absorbance and fluorescence optical properties reveal that urban sites have lower concentrations, elemental ratios, and less complex DOM. In contrast, forested blackwater sites have concentrations an order of magnitude higher, elevated …

Tidal Flooding Contributes To Eutrophication: Constraining Nonpoint Source Inputs To An Urban Estuary Using A Data Driven Statistical Model, Alfonso Macías-Tapia, Margaret R. Mulholland, Corday R. Selden, Sophie Clayton, Peter W. Bernhardt, Thomas R. Allen

OES Faculty Publications

In coastal urban areas, tidal flooding brings water carrying nutrients and particles back from land to estuarine and coastal waters. A statistical model to predict nutrient loads during tidal flooding events can help estimate nutrient loading from previous and future flooding events and adapt nutrient reduction strategies. We measured concentrations of dissolved inorganic nitrogen and phosphorus in floodwater at seven sentinel sites during 15 tidal flooding events from January 2019 to September 2020. The study area was the Lafayette River watershed in Norfolk, VA, USA, which is prone to tidal flooding and is predicted to experience more frequent and intense …

Sandy Subterranean Estuaries Minimize Groundwater Nitrogen Pollution Impacts On Coastal Waters, Xiaogang Chen, Isaac R. Santos, Jinzhou Du, Bochao Xu, Joseph J. Tamborski, Ding He, Neven Cukrov, Christian J. Sanders, Jianan Liu, Peiyuan Zhu, Yan Zhang, Ling Li

OES Faculty Publications

Widespread anthropogenic activities pollute groundwater that eventually seeps out to the coastal ocean. Here, we resolve nutrient transformations and fluxes in 11 sandy subterranean estuaries (STEs) with contrasting nutrient sources and development trajectories. Coastal groundwater nitrogen pollution stems from sewage discharge and land use change. Anthropogenically derived groundwater nutrient fluxes with high N/P ratios (∼170) accounted for 22%–61% of riverine inputs into China's coastal waters, providing an additional source of nutrients that can fuel coastal eutrophication and algal blooms. Sandy STEs remarkably attenuated ∼84% of nitrogen pollution, minimizing the impact of submarine groundwater discharge (SGD) on coastal water quality. Hence, …

Evaluation Of Practical Methods To Determine If A Karst Creek Is Gaining Or Losing: Case Study Of Leith Creek, Elizabeth Jones

Graduate Theses/Dissertations

Karst landscapes are abundant in Missouri, with features such as caves, springs, and sinkholes that form through the dissolution of limestone. Leith Creek is a small stream in Polk County, Missouri fed by two springs and the shallow unconfined Springfield Plateau aquifer, a highly karstified aquifer which is made up of limestone and minor interbedded shale-mudstone units. To determine if Leith Creek is gaining or losing, stream flow, water chemistry and temperature sensors were monitored. Stream flow results required multiple visits to take measurements while temperature sensors required two visits, one to install the dataloggers and another to remove the …

Changes In Climate And Their Implications For Cattle Nutrition And Management, Bashiri Iddy Muzzo, R. Douglas Ramsey, Juan J. Villalba

Wildland Resources Faculty Publications

Climate change is a global challenge that impacts rangeland and pastureland landscapes by inducing shifts in temperature variability, precipitation patterns, and extreme weather events. These changes alter soil and plant conditions, reducing forage availability and chemical composition and leading to nutritional stress in cattle. This stress occurs when animals lack adequate water and feed sources or when these resources are insufficient in quantity, composition, or nutrient balance. Several strategies are essential to address these impacts. Genetic selection, epigenetic biomarkers, and exploration of epigenetic memories present promising avenues for enhancing the resilience of cattle populations and improving adaptation to environmental stresses. …

The Impacts Of Anthropogenic Activity And Climate Change On The Formation Of Harmful Algal Blooms (Habs) And Its Ecological Consequence, Zhangxi Hu, Aifeng Li, Zhun Li, Margaret R. Mulholland

OES Faculty Publications

No abstract provided.

Stream Restoration Effectiveness In Mullins Creek In Fayetteville, Arkansas, Amadeo Scott

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

Lotic waterways are vital for habitat, food, water, and flood protection, but urbanization poses a major threat to their integrity. Runoff from urban surfaces leads to pollution, flashiness, loss of biodiversity, and other symptoms, also known as Urban Stream Syndrome (USS). To combat USS, streams can be restored, but most restorations are not monitored so their long-term effectiveness is unknown. This study quantitatively evaluated a decade-old stream restoration in Fayetteville, Arkansas, to assess its effectiveness in combating USS and achieving set restoration goals, and to gain insights for future restoration projects. Restoration goals included decreasing erosion and sedimentation, increasing pool …

Causes And Effects Of Shisper Glacial Lake Outburst Flood Event In Karakoram In 2022, Sandeep Kumar Mondal, Vatsal D. Patel, Rishikesh Bharti, Ramesh P. Singh

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Karakoram Himalayas are vulnerable to glacial lake outburst floods (GLOFs), which cause catastrophic floods in the surrounding areas. The increasing natural and anthropogenic activities, especially in the Indo-Gangetic Plains at the southern flank of the towering Himalayas, could be the cause of climate change affecting the frequency of the natural hazards in the Himalayas. In the present study, a detailed analysis of the Shisper Lake breach of 7 May 2022 is carried out using satellite remote sensing. A decreasing trend in the glacial mass balance is observed between 2017 and 2021; in this period, frequent GLOF episodes occurred. A pronounced …

Effects Of Coastal Freshening On Porewater Salinity And Nitrogen Cycling In Brackish Marsh Soils: Implications For Biogeochemical Resilience In Barataria Basin, La, Robert C. Feder

LSU Master's Theses

The Mid-Barataria Sediment Diversion will divert sediments and fresh water from the Mississippi River into mid-Barataria Basin, LA for the purposes of building and sustaining coastal marshes, potentially reducing the estuarine salinity to 0 during operation. Increased freshwater inputs to the area of project influence may reduce porewater salinity and induce ammonium adsorption in brackish marsh soils of the region, potentially impacting the activity of ammonium-producing and denitrifying bacteria. However, brackish soils occur in zones of intermediate salinity and may, therefore, exhibit biogeochemical resilience to episodic changes in surface water salinity. I hypothesized that inundating brackish marsh soils with fresh …

Hydropower To The People: Implications Of A Comparative Macroinvertebrate Study On Either Side Of The Central Hidroeléctrica Topo In Tungurahua, Ecuador, Grace Mazur

Independent Study Project (ISP) Collection

This study uses macroinvertebrates as bioindicators to assess the water quality upstream and downstream of a hydroelectric project in Ecuador’s eastern cloud forest. Ecuador has increasingly turned to hydropower to supply its energy needs as pressure mounts to turn away from fossil fuels. This transition has been realized on the Río Topo, located in the province of Tungurahua. This study aims to determine how the Central Hidroeléctrica Topo (CHT), a diversion hydroelectric project (HEP) constructed on the Río Topo in the 2010s, has affected the water quality of the river. Samples were taken of benthic (bottom-dwelling) macroinvertebrates in the Río …

Constituent Loads And Trends In The Upper White River Basin: A Nonpoint Source Management Program Priority Watersheds, Erin M. Grantz, Brian E. Haggard

Arkansas Water Resources Center Technical Reports

The Arkansas Department of Agriculture – Natural Resources Division (ANRD) has identified the Upper White River Basin (UWRB; HUC 11010001) a hydrologic unit code (HUC) 8 watersheds, located in Northwest Arkansas, for prioritization by the Nonpoint Source (NPS) Management Program. UWRB includes Beaver Lake in its borders, the drinking water source for 1 in 6 Arkansans. Nonpoint source pollution concerns in these watersheds are excess nutrients from agriculture and sediment from changes in land use/land cover (LULC).

Local, state, and national groups, including the NPS Source Management Program, have invested in education, best management practices, and streambank restoration in the …

Constituent Loads And Trends In The Upper Illinois River Watershed: A Nonpoint Source Management Program Priority Watershed, Erin M. Grantz, Brian E. Haggard

Arkansas Water Resources Center Technical Reports

The Arkansas Department of Agriculture - Natural Resources Division (ANRD) has identified the Upper Illinois River Watershed (UIRW; 11110103), a hydrologic unit code (HUC) 8 watershed, located in Northwest Arkansas for prioritization by the Nonpoint Source (NPS) Management Program. URIW encompasses the Illinois River from its headwaters to the state line with Oklahoma and has been the subject of interstate disputes over water quality for decades. Nonpoint source pollution concerns in UIRW are excess nutrients from agriculture and sediment from changes in land use/land cover (LULC).

Local, state, and national groups, including the NPS Source Management Program, have invested in …

Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli

CERCOM Reports

The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 11 locations in the Great South Bay from Memorial Day – Labor Day to monitor dissolved oxygen (DO), pH, salinity, clarity and temperature. Students are trained to assist in CERCOM’s water quality data collection by research assistant Mr. Kyle Maurelli. This monitoring program has been conducted for the past 17 years. These parameters are critical in determining long term water quality conditions in Long Island estuaries

The Importance Of Winter Dinoflagellate Blooms In Chesapeake Bay— A Missing Link In Bay Productivity, Nicole C. Millette, Sophie Clayton, Margaret R. Mulholland, Leah Gibala-Smith, Michael Lane

OES Faculty Publications

It is widely assumed that phytoplankton abundance and productivity decline during temperate winters because of low irradiance and temperatures. However, winter phytoplankton blooms commonly occur in temperate estuaries, but they are often undocumented because of reduced water quality monitoring in winter. The small body of in situ work that has been done on winter blooms suggests they can be of enormous consequence to ecosystems. However, because monitoring is often reduced or stopped altogether during winter, it is unclear how widespread these blooms are or how long they can last. We analyzed an over 30-year record of monthly phytoplankton monitoring samples …

Five Years Measuring The Muck: Evaluating Interannual Variability Of Nutrient Loads From Tidal Flooding, Alfonso Macías-Tapia, Margaret R. Mulholland, Corday R. Selden, J. Derek Loftis, Peter W. Bernhardt

OES Faculty Publications

Due to sea level rise, tidal flooding is now common in low-lying coastal systems around the world. Yet, the contribution of tidal flooding to non-point source nutrient loads and their impact on the quality of adjacent waters remains poorly constrained. Here, we quantified dissolved nutrient loading and Enterococcus abundance during annual autumnal king tides (i.e., perigean spring tides), between 2017 and 2021, in a sub-watershed of the lower Chesapeake Bay. To calculate nutrient loading from tidal flooding, we used geospatial inundation depths from a street-level hydrodynamic model to estimate floodwater volumes during each of the five sampling events and the …

Defining Critical Or Hydrologic Conditions As Sampled During The Joint Study, Brian E. Haggard, Erin Grantz, J. T. Scott

Arkansas Water Resources Center Technical Reports

The “Joint Study” was conducted to fulfill the obligations of the second “Statement of Joint Principles and Actions” agreed to by the states of Arkansas and Oklahoma. The “Joint Study” affirmed the magnitude of Oklahoma’s Scenic River total phosphorus (TP) criteria (i.e., 0.037 mg/L), but it added the new caveat of applying the criteria to “critical conditions.” The primary purpose of this paper was to define “critical conditions” based on the range in base flow proportions (BFP) of total streamflow on days that were sampled in the “Joint Study,” where BFP is base flow discharge divided by total stream flow …

Influences Of Seasonality And Habitat Quality On Great Lakes Coastal Wetland Fish Community Composition And Diets, Sara N. Diller, Anna M. Harrison, Kurt P. Kowalski, Valerie J. Brady, Jan J. H. Ciborowski, Matthew J. Cooper, Joshua D. Dumke, Joseph P. Gathman, Carl R. Ruetz Iii, Donald G. Uzarski, Douglas A. Wilcox, Jeffrey S. Schaeffer

United States Geological Survey: Staff Publications

Great Lakes coastal wetlands (GLCW) have been severely degraded by anthropogenic activity over the last several decades despite their critical role in fish production. Many Great Lakes fish species use coastal wetland habitats for spawning, feeding, shelter, and nurseries throughout the year. The goal of our study was to compare GLCW fish community composition in the spring, summer, and fall months and investigate how water quality relates to fish diversity, the presence of functional groups, and juvenile fish diets. We summarized fish data collected from GLCW across the basin and used the coastal wetland monitoring program’s water quality-land use indicator …

Arkansas Bulletin Of Water Research - Issue 2021-2022, Erin Grantz, Lillie Haddock, Brian E. Haggard

Arkansas Bulletin of Water Research

The Arkansas Bulletin of Water Research (Bulletin) is a publication of the Arkansas Water Resources Center (AWRC). We publish the Bulletin to communicate the major findings of research funded by the Water Resources Research Act Section 104(b) in Arkansas. This research is relevant to Arkansas water stakeholders, and the Bulletin provides an easily searchable and aesthetically engaging access option.

This is the fourth publication of the Bulletin. This issue contains final reports from research projects that were funded by the 104(b) program in fiscal years 2019 and 2020. The articles in this issue can be cited as an AWRC publication. …

Great South Bay, Long Island, New York Summer Water Quality Monitoring Program, Cercom, Molloy University, John Tanacredi Ph.D., Kyle F. Maurelli

CERCOM Reports

The Center for Environmental Research and Coastal Oceans Monitoring (CERCOM) visits 11 locations in the Great South Bay from Memorial Day – Labor Day to monitor dissolved oxygen (DO), pH, salinity, clarity and temperature. Students are trained to assist in CERCOM’s water quality data collection by research assistant Mr. Kyle Maurelli. This monitoring program has been conducted for the past 17 years. These parameters are critical in determining long term water quality conditions in Long Island estuaries

Simulated Response Of St. Joseph Bay, Florida, Seagrass Meadows And Their Belowground Carbon To Anthropogenic And Climate Impacts, Marie Cindy Lebrasse, Blake A. Schaeffer, Richard C. Zimmerman, Victoria J. Hill, Megan M. Coffer, Peter J. Whitman, Wilson B. Salls, David D. Graybill, Christopher L. Osburn

OES Faculty Publications

Seagrass meadows are degraded globally and continue to decline in areal extent due to human pressures and climate change. This study used the bio-optical model GrassLight to explore the impact of climate change and anthropogenic stressors on seagrass extent, leaf area index (LAI) and belowground organic carbon (BGC) in St. Joseph Bay, Florida, using water quality data and remotely-sensed sea surface temperature (SST) from 2002 to 2020. Model predictions were compared with satellite-derived measurements of seagrass extent and shoot density from the Landsat images for the same period. The GrassLight-derived area of potential seagrass habitat ranged from 36.2 km2 …

Nutrient Improvements In Chesapeake Bay: Direct Effect Of Load Reductions And Implications For Coastal Management, Rebecca R. Murphy, Jennifer Keisman, Jon Harcum, Renee R. Karrh, Mike Lane, Elgin S. Perry, Qian Zhang

Biological Sciences Faculty Publications

In Chesapeake Bay in the United States, decades of management efforts have resulted in modest reductions of nutrient loads from the watershed, but the corresponding improvements in estuarine water quality have not consistently followed. Generalized additive models were used to directly link river flows and nutrient loads from the watershed to nutrient trends in the estuary on a station-by-station basis, which allowed for identification of exactly when and where responses are happening. Results show that Chesapeake Bay’s total nitrogen and total phosphorus conditions are mostly improving after accounting for variation in freshwater flow. Almost all of these improving nutrient concentrations …