Data Science Commons^™

Network Analysis Of Virginia’S Mineralogical Systems, Cadence M. Boucher, Ahmed M. Eleish, Robert M. Hazen, Shaunna M. Morrison

Virginia Journal of Science

The principal objective of this study was to use network analysis to identify spatial, geomorphic, physical, and chemical patterns in Virginia’s mineralogical systems. Mineralogical and locality data from mindat.org were visualized as a bipartite force- directed network of the minerals and the counties of Virginia in which they occur. Mineral nodes were sized to represent the number of counties the minerals are found in (i.e., frequency of occurrence) and county nodes were sized to represent the number of minerals found in that county (i.e., mineral diversity). Furthermore, the nodes were colored to display selected attributes of the mineral-county data. County …

Optimizing Medical School Enrollment, Justin Koida, Nicholas Quattrocchi

College of Engineering Summer Undergraduate Research Program

The increasing physician shortage, coupled with an aging population, presents significant challenges for healthcare systems. With higher education facing a projected enrollment cliff, and a decline in youth math and reading scores, identifying the most qualified medical school applicants is imperative. With thousands of applications received annually for only 300 spots at Western University of Health Sciences (WesternU), it is crucial to streamline the selection process while minimizing applicant attrition and melt.

In our research project, we develop a predictive model to identify candidates for interviews based on success data from students at WesternU. We utilized a dataset provided by …

Leveraging Tradespace-Exploration For A Senior Project Team Formation Application, Miguel Saenz

College of Engineering Summer Undergraduate Research Program

This project revolves around the development of an app in MATLAB that leverages the VASSAR rule-based system and a genetic algorithm to form groups of teams for the Mechanical Engineering Senior Design project class. We leveraged the iterative design process to eventually attain a functional app with a reasonable runtime that works provided correctly formatted rulesheets describing student project preference and member preference.

Exploring Machine Learning, Feature Engineering, And Explainability To Constrain Spica’S Apsidal Constant Through Mesa Simulations, Hannah C. Woodruff

Doctoral Dissertations and Master's Theses

Spica (α-Virginis) is a notable binary star system located in the constellation of Virgo and offers valuable insights into stellar interiors and dynamics. Within binary systems, gravitational forces between the two stars cause minor distortions that alter their orbital motion. The steady rate of this alteration is known as the apsidal constant, which provides key information about a star’s internal structure and its evolutionary state. Traditionally, stellar environments like Spica are studied using simulations, such as MESA (Modules for Experiments in Stellar Astrophysics). These simulations allow researchers to explore various aspects of stellar behavior through the entire evolution of the …

Making Plans Findable, Accessible, Interoperable, And Reusable With Data Infrastructure: A Search Engine For Constructing, Analyzing, And Visualizing Planning Documents, Lindsay Poirier, Dexter Antonio, Makenna Dettmann, Tiffany Eng, Jennifer Ganata, Sujoy Ghosh, Mirthala Lopez, Ranesh Karma, Asiya Natekal, Catherine Brinkley

Statistical and Data Sciences: Faculty Publications

Local land-use plans help guide future development, but it is often difficult to compare content across jurisdictions, making regional coordination and plan evaluation challenging. This research reviews federal, state, and local data infrastructure guidance for land-use plans and compares such guidance to compliance with a California use-case. Findings indicate a number of obstacles to fostering data sharing and comparative analysis of plans: there is currently no central repository of land-use plans; plans are not uniform in format and are often out of date; many plans are not machine-readable thereby inhibiting text extraction, and planning language varies so greatly that there …

Challenges Of Using More Precise Temporal And Spatial Resolution Of Remote Sensing Data For Surface Water Quality Monitoring, Ivan Rykin

Dartmouth College Master’s Theses

Monitoring river suspended sediment concentration (SSC) is critical for environmental challenges such as understanding the fate of thawed permafrost sediment and its impact on global carbon cycling. However, traditional SSC monitoring using Landsat imagery is limited by spatial and temporal constraints, particularly for narrow rivers in cloudy and/or snowy regions.

This study investigates the use of higher spatial (3 m) and temporal (daily) resolution satellite imagery from the PlanetScope constellation to estimate SSC in remote rivers such as those in the Arctic. I compare the performance of PlanetScope’s spectral resolution (4 and 8 bands) with Landsat 7. Merging data from …

Meta-Analysis Of Censored Adverse Events, Xinyue Qi, Shouhao Zhou, Christine B Peterson, Yucai Wang, Xinying Fang, Michael L Wang, Chan Shen

Faculty, Staff and Student Publications

Meta-analysis is a powerful tool for assessing drug safety by combining treatment-related toxicological findings across multiple studies, as clinical trials are typically underpowered for detecting adverse drug effects. However, incomplete reporting of adverse events (AEs) in published clinical studies is frequently encountered, especially if the observed number of AEs is below a pre-specified study-dependent threshold. Ignoring the censored AE information, often found in lower frequency, can significantly bias the estimated incidence rate of AEs. Despite its importance, this prevalent issue in meta-analysis has received little statistical or analytic attention in the literature. To address this challenge, we propose a Bayesian …

A Framework For Human Evaluation Of Large Language Models In Healthcare Derived From Literature Review, Thomas Yu Chow Tam, Sonish Sivarajkumar, Sumit Kapoor, Alisa V Stolyar, Katelyn Polanska, Karleigh R Mccarthy, Hunter Osterhoudt, Xizhi Wu, Shyam Visweswaran, Sunyang Fu, Piyush Mathur, Giovanni E Cacciamani, Cong Sun, Yifan Peng, Yanshan Wang

Faculty, Staff and Student Publications

With generative artificial intelligence (GenAI), particularly large language models (LLMs), continuing to make inroads in healthcare, assessing LLMs with human evaluations is essential to assuring safety and effectiveness. This study reviews existing literature on human evaluation methodologies for LLMs in healthcare across various medical specialties and addresses factors such as evaluation dimensions, sample types and sizes, selection, and recruitment of evaluators, frameworks and metrics, evaluation process, and statistical analysis type. Our literature review of 142 studies shows gaps in reliability, generalizability, and applicability of current human evaluation practices. To overcome such significant obstacles to healthcare LLM developments and deployments, we …

Exploring How Uncertain Labels From Non-Consensus Panels Affect Machine Learning, Amal Almansour

College of Computing and Digital Media Dissertations

A dataset becomes meaningful for analysis when it contains more representative features. Machine and deep learning models rely on annotated instances for training. The annotation process is usually done either by humans (experts or crowdsourcing) or by models. In many cases, the variability between humans (the inter-observer variability) in evaluation leads to uncertainty in the learning process. Due to the lack of reliable labels in large datasets, the inter-observer variability can be quantified with different methods to estimate the ground truth label (i.e., referenced standard label) for model learning.

In health care, with the rise of artificial intelligence in clinical …

The Aimag Project: Using Machine Learning To Predict Crustal Magnetic Anomaly Values, Xavier Gobble, Marlie Mollett, Dr. Dawn King, Dr. Cory Reed, Erin Knese

Undergraduate Research Symposium

A detailed model of the Earth’s total magnetic field is important for acquiring the means for GPS-alternative, magnetic anomaly-based navigation. The Earth’s total magnetic field is an amalgam of 5 mechanisms: the geodynamo generated by the rotation of the Earth’s molten iron core, the fields induced by the flows of electric current in the atmosphere and oceans, the disturbance of the ionosphere by solar wind, and local anomalies attributable to ferromagnetic minerals present in the crust; the lattermost compose the crustal magnetic field. The EMAG2v3 dataset comprises a compilation of satellite, shipborne, and airborne magnetic measurements differenced from the Comprehensive …

Trends From 20 Years Of Artificial Intelligence In Financial Services In Africa, Nthabiseng Moela, Lerato Matlala, Jackie Ma, Dipuo Maphutha, Hossana Twinomurinzi

African Conference on Information Systems and Technology

The need for financial inclusion in Africa, particularly for marginalised groups like women and small businesses, highlights the importance of leveraging Artificial Intelligence (AI). This study provides a bibliometric analysis of AI's integration into African financial services from 2003 to 2023. The key results show a significant increase in AI use, particularly in fraud detection, credit risk prediction, and stock market volatility forecasting, with 49% of the research coming from South Africa, Nigeria, and Tunisia. However, areas like financial development management, inflation control, and gender disparities in loan access remain underexplored. The emphasis has been on the technical implementation of …

Review Of Data Bias In Healthcare Applications, Atharva Prakash Parate, Aditya Ajay Iyer, Kanav Gupta, Harsh Porwal, P. C. Kishoreraja, R. Sivakumar, Rahul Soangra

Physical Therapy Faculty Articles and Research

In the area of medical artificial intelligence (AI), data bias is a major difficulty that affects several phases of data collection, processing, and model building. The many forms of data bias that are common in AI in healthcare are thoroughly examined in this review study, encompassing biases related to socioeconomic status, race, and ethnicity as well as biases in machine learning models and datasets. We examine how data bias affects the provision of healthcare, emphasizing how it might worsen health inequalities and jeopardize the accuracy of AI-driven clinical tools. We address methods for reducing data bias in AI and focus …

Institutional Data Repositories Are Vital, Jen Darragh, Mikala R. Narlock, Halle Burns, Peter A. Cerda, Wind Cowles, Leslie M. Delserone, Seth Erickson, Joel Herndon, Heidi Imker, Lisa R. Johnston, Sherry Lake, Michael Lenard, Alicia Hofelich Mohr, Jennifer Moore, Jonathan Petters, Brandie Pullen, Shawna Taylor, Briana Wham

University of Nebraska-Lincoln Libraries: Faculty Publications

As funding agencies and publishers reiterate research data sharing expectations (1), many higher-education institutions have demonstrated their commitment to the long-term stewardship of research data by connecting researchers to local infrastructure, with dedicated staffing, that eases the burden of data sharing. Institutional repositories are an example of this investment (2). They provide support for researchers in sharing data that might otherwise be lost: data without a disciplinary repository, data from projects with limited funding, or data that are too large to sustainably store elsewhere. The staffing and technical infrastructure provided by institutional repositories ensures responsible access to information while considering …

20 Years Of Repo Interest Rate Determination Using Ai: Global Trends And Africa, Takalani Rasalanavho, Henry Hondo, Kevin Julius, Marius Alembong, Sikelela Madonsela, Hossana Twinomurinzi

African Conference on Information Systems and Technology

This study investigated the application of artificial intelligence (AI) in determining repo interest rates, which play a vital role in guiding monetary policy, controlling inflation, and ensuring economic stability. Through a bibliometric review of research from 2004 to 2024, the findings highlight AI's transformative impact, particularly in forecasting, optimising repo rate decisions, and improving risk assessment for more effective monetary policy. However, the study also identifies a significant gap in AI usage for repo rate determination in African countries, with contributions largely limited to Ghana, Nigeria, Egypt, and South Africa. This underrepresentation poses a risk of Africa falling behind in …

Revolutionizing Medical Education: Harnessing Ai To Cultivate Critical Thinking Skills, Alex Zuo, Anthony L. Alanis

Research Colloquium

Our study intends to integrate AI-enabled tools in medical education, including but not limited to adaptive learning systems, virtual patients, and AI-enhanced assessment methods, to develop and foster critical thinking and problem-solving skills with the engagement of medical students. It is expected that this provides for a good environment for both teachers and students through workshops, online resources, and collaborative academic projects. We also consider AI-generated images and open educational resources that could augment curricula and personalize the experience for learners. Medical educators use storytelling, including AI for data storytelling, to package complex clinical data in approachable yet revealing ways …

Data-Driven Mathematical Modeling And Simulation Of Migration Dynamics During The Russian-Ukrainian War, Danielle Sitalo, Alonso Ogueda-Oliva, Padmanabhan Seshaiyer

Spora: A Journal of Biomathematics

In this work, we employ a governing system of ordinary differential equations (ODEs) to create a mathematical model for getting insights into the dynamics of migration of Ukrainians evacuating due to war. A suitable assumption on coefficients of this model results in the well-known logistic growth. Additionally, stability analyses of equilibrium solutions for these ODEs are performed, and we employ parameter estimation techniques to identify coefficients using online datasets via both a least-squares approach as well as a physics informed neural network approach. Our findings indicate that over time, the daily influx of Ukrainian refugees to Poland stabilizes at a …

Big Geospatiotemporal Data Approaches To Monitoring And Mitigating Environmental Impacts In Agriculture, Olatunde D. Akanbi, Vibha S. Mandayam, Erika I. Barcelos, Arafath Nihar, Yinghui Wu, Jeffrey Yarus, Roger H. French

Student Scholarship

This research explores the application of geospatial techniques for global agricultural monitoring, integrating satellite imagery and soil data to assess crop health and soil conditions. Our approach provides actionable insights to improve agricultural productivity and sustainability, addressing food security challenges through advanced machine learning models.

Supplementary Files For "Impact Of Snow Accumulation On Structural Integrity: Present And Future Perspectives", Kenneth Pomeyie, Brennan Bean

Browse all Datasets

Evaluating the impact of weight exerted by settled snow (i.e., snow load) on structures poses numerous statistical challenges, including missing data, biased distribution parameters, and the influence of climate change. This dissertation aims to address challenges related to the use both direct and indirect measurements of snow load (or equivalently, snow water equivalent), as well as the anticipated impact of climate change on future extreme snow loads. The first paper within this dissertation investigates short-term snow loads by comparing various techniques for estimating extreme values of short-term snow accumulations. Additionally, the first paper includes a comparative analysis of short-term and …

Design And Implementation Of An Opioid Scorecard For Hospital System-Wide Peer Comparison Of Opioid Prescribing Habits: Observational Study, Benjamin Slovis, Soonyip Huang, Melanie Mcarthur, Cara Martino, Tasia Beers, Meghan Labella, Jeffrey Riggio, Edmund Pribitkin

Jefferson Hospital Staff Papers and Presentations

BACKGROUND: Reductions in opioid prescribing by health care providers can lead to a decreased risk of opioid dependence in patients. Peer comparison has been demonstrated to impact providers' prescribing habits, though its effect on opioid prescribing has predominantly been studied in the emergency department setting.

OBJECTIVE: The purpose of this study is to describe the development of an enterprise-wide opioid scorecard, the architecture of its implementation, and plans for future research on its effects.

METHODS: Using data generated by the author's enterprise vendor-based electronic health record, the enterprise analytics software, and expertise from a dedicated group of informaticists, physicians, and …

A Case Demonstration Of The Open Health Natural Language Processing Toolkit From The National Covid-19 Cohort Collaborative And The Researching Covid To Enhance Recovery Programs For A Natural Language Processing System For Covid-19 Or Postacute Sequelae Of Sars Cov-2 Infection: Algorithm Development And Validation, Andrew Wen, Liwei Wang, Huan He, Sunyang Fu, Sijia Liu, David A Hanauer, Daniel R Harris, Ramakanth Kavuluru, Rui Zhang, Karthik Natarajan, Nishanth P Pavinkurve, Janos Hajagos, Sritha Rajupet, Veena Lingam, Mary Saltz, Corey Elowsky, Richard A Moffitt, Farrukh M Koraishy, Matvey B Palchuk, Jordan Donovan, Lora Lingrey, Garo Stone-Derhagopian, Robert T Miller, Andrew E Williams, Peter J Leese, Paul I Kovach, Emily R Pfaff, Mikhail Zemmel, Robert D Pates, Nick Guthe, Melissa A Haendel, Christopher G Chute, Hongfang Liu, National Covid Cohort Collaborative, Recover Initiative

Faculty, Staff and Student Publications

BACKGROUND: A wealth of clinically relevant information is only obtainable within unstructured clinical narratives, leading to great interest in clinical natural language processing (NLP). While a multitude of approaches to NLP exist, current algorithm development approaches have limitations that can slow the development process. These limitations are exacerbated when the task is emergent, as is the case currently for NLP extraction of signs and symptoms of COVID-19 and postacute sequelae of SARS-CoV-2 infection (PASC).

OBJECTIVE: This study aims to highlight the current limitations of existing NLP algorithm development approaches that are exacerbated by NLP tasks surrounding emergent clinical concepts and …

Data Analysis On Predicting The Top 12 Fantasy Football Players By Position, Alan Abadzic, Jacquelyn Cheun, Milan Patel

SMU Data Science Review

Fantasy football enthusiasts rely on rankings populated by their platform of choice to draft winning teams and make strategic roster decisions. This study presents a comprehensive analysis of player performance data to forecast the top 12 fantasy points performers per position for the upcoming season. Leveraging machine learning techniques and historical data, our model identifies key performance indicators and trends to inform player evaluations. Insights gleaned from positional trends, breakout candidates, risk assessment, and matchup analysis offer a competitive edge. By addressing limitations, ethical considerations, and avenues for future research, this study contributes to the advancement of fantasy sports analysis …

Enhancing Imputation Accuracy: A Multi-Faceted Approach For Missing Data In Chicago Arrest Records, Steve Bramhall, Jae Chung, Nicholas Mueller

SMU Data Science Review

This paper introduces a novel approach to enhance the imputation process for missing data, utilizing crime records from Chicago with arrests as the target feature. Robust imputation techniques are crucial in the era of burgeoning datasets for generating reliable insights. Our core objective is to present an innovative method that improves imputation techniques, augmenting model performance and bolstering the reliability of analytical outcomes. Leveraging numeric crime data, we establish a Gradient Boosting (GBM) baseline model, then introduce ensemble methods including Random Forest and Decision Trees for further refinement. By systematically exploring multiple imputation processes, we establish a baseline for comparative …

Geospatial Temporal Crime Prediction Using Convolution And Lstm Neural Networks: Enhancing The Las Vegas Cardiff Model, Corey D. Holmes, Christian Orji, Chris Papesh

SMU Data Science Review

According to the Department of Justice, more than half of violent crimes go unreported to law enforcement in the United States (Kollar et al., 2018). This data gap reduces the opportunity to implement proven solutions in the areas with the greatest need. In 1996, Dr. Shepherd developed the Cardiff Model with the aim of bringing together hospitals, law enforcement, and community leaders through the sharing of data. We partnered with ongoing efforts to implement the Cardiff Model in Las Vegas, Nevada. Our goal was to provide a geospatial temporal model that can predict the next 30 days of crime. By …

Rethinking Retrieval Augmented Fine-Tuning In An Evolving Llm Landscape, Nicholas Sager, Timothy Cabaza, Matthew Cusack, Ryan Bass, Joaquin Dominguez

SMU Data Science Review

This study explores the utilization of Retrieval Augmented Fine-Tuning (RAFT) to enhance the performance of Large Language Models (LLMs) in domain-specific Retrieval Augmented Generation (RAG) tasks. By integrating domain-specific information during the retrieval process, RAG aims to reduce hallucination and improve the accuracy of LLM outputs. We investigate the use of RAFT, an approach that enhances LLMs by incorporating domain-specific knowledge and effectively handling distractor documents. This paper validates previous work, which found that RAFT can considerably improve the performance of Llama2-7B in specific domains. We also expand upon previous work into new state-of-the-art open-source models and other datasets with …

Enhancing Shap With Multi-Core Parallelization And Distributed Computation, Matthew David, William Jones, Hayley Horn

SMU Data Science Review

In recent years, the adoption of complex machine learning algorithms, often perceived as “black box” models, has grown exponentially across various disciplines. However, the lack of understanding regarding how these models come to their predictions often fosters skepticism and mistrust. In response to the demand for transparency and interpretability, Explainable AI techniques, such as SHapley Additive exPlanations (SHAP), have emerged as powerful tools for comprehending and trusting these algorithms. However, SHAP has an exponential computational demand O( x2 ), where x is the number of features. This becomes increasingly problematic with the larger datasets standard in most industries. Many frameworks …

Improving Large Language Models For Clinical Named Entity Recognition Via Prompt Engineering, Yan Hu, Qingyu Chen, Jingcheng Du, Xueqing Peng, Vipina Kuttichi Keloth, Xu Zuo, Yujia Zhou, Zehan Li, Xiaoqian Jiang, Zhiyong Lu, Kirk Roberts, Hua Xu

Faculty, Staff and Student Publications

IMPORTANCE: The study highlights the potential of large language models, specifically GPT-3.5 and GPT-4, in processing complex clinical data and extracting meaningful information with minimal training data. By developing and refining prompt-based strategies, we can significantly enhance the models' performance, making them viable tools for clinical NER tasks and possibly reducing the reliance on extensive annotated datasets.

OBJECTIVES: This study quantifies the capabilities of GPT-3.5 and GPT-4 for clinical named entity recognition (NER) tasks and proposes task-specific prompts to improve their performance.

MATERIALS AND METHODS: We evaluated these models on 2 clinical NER tasks: (1) to extract medical problems, treatments, …

Ensemble Pretrained Language Models To Extract Biomedical Knowledge From Literature, Zhao Li, Qiang Wei, Liang-Chin Huang, Jianfu Li, Yan Hu, Yao-Shun Chuang, Jianping He, Avisha Das, Vipina Kuttichi Keloth, Yuntao Yang, Chiamaka S Diala, Kirk E Roberts, Cui Tao, Xiaoqian Jiang, W Jim Zheng, Hua Xu

Faculty, Staff and Student Publications

OBJECTIVES: The rapid expansion of biomedical literature necessitates automated techniques to discern relationships between biomedical concepts from extensive free text. Such techniques facilitate the development of detailed knowledge bases and highlight research deficiencies. The LitCoin Natural Language Processing (NLP) challenge, organized by the National Center for Advancing Translational Science, aims to evaluate such potential and provides a manually annotated corpus for methodology development and benchmarking.

MATERIALS AND METHODS: For the named entity recognition (NER) task, we utilized ensemble learning to merge predictions from three domain-specific models, namely BioBERT, PubMedBERT, and BioM-ELECTRA, devised a rule-driven detection method for cell line and …

Advanced Predictive Analytics On Financial Donations To Nonprofit Organizations, Fhamida Keya

Dissertations, Theses, and Capstone Projects

Non-profit organizations rely on donation contributions to carry out their social driven agenda. In the context of fundraising and donor management, it is crucial to uncover complex insights about donor behavior for optimizing strategies and enhancing donor engagement. This project employed advanced analytical techniques on the dataset Donations Received by City Agencies sourced from NYC Open Data by implementing predictive modeling, clustering segmentation, and time series analysis and forecasting. The project will attempt to uncover patterns in donation behavior, identify factors that influence donation amounts, and segment out donor profiles all of which can be leveraged to optimize strategy decisions, …

Who Are You Rooting For? T20 Cricket World Cup 2024, Usa & Wi, Purvesh Desai

Dissertations, Theses, and Capstone Projects

The T20 Cricket World Cup '24 played in USA & WI will bring immense excitement to the cricket lovers around the world and have a question to themselves “Who shall I Root for?” How do people or fans support their favorite teams and on what criteria do they pick these teams will discuss in here.

Patriotism, tradition, and favorite individual players, are the main reasons for the fans to choose their and support the team. Nation is the biggest pride of an individual and many people choose their pride over everything. People celebrate when the home team plays on the …

A Machine Learning Approach To Discovering Physical Models Of Galaxy Formation, Festa Bucinca

Dissertations, Theses, and Capstone Projects

Galaxies are the breathtakingly beautiful starry islands of the Universe. The process of galaxy formation involves the transformation from simple initial conditions in the early Universe to the complex galaxy structures we observe today. Spanning an immense spatial range and tremendous time scales - from the vastness of the Universe to the scale of individual stars - the physics of galaxy formation is both complex and crucial for understanding the Universe we live in. However, despite significant advancements, our theoretical understanding of galaxy formation remains incomplete.

In the era of big data available from hydrodynamical simulations and observations, Machine Learning …