Data Science Commons^™

Individualized Bayesian Inference Identifies Novel Genetic Variants For Parkinson's Disease, Jin Ren, Yasaman J. Soofi, Md Asad Rahman, Qing Lu, Jinling Liu

Engineering Management and Systems Engineering Faculty Research & Creative Works

Parkinson's disease (PD) is a complex neurodegenerative disorder with a significant genetic component. While genome-wide association studies (GWAS) have been instrumental in identifying genetic variants associated with PD, the reliance on large sample sizes and population-level analyses may overlook variants with lower minor allele frequencies or individual-specific relevance. Individualized Bayesian Inference (IBI) offers a promising method to complement GWAS by identifying and prioritizing candidate genetic markers at both the individual and patients-like-me subgroup levels. This study evaluates the application of IBI to PD genetics, using GWAS as a baseline for comparison. We analyzed genetic data from the Fox Insight online …

The Self-Aware Room: A Framework For Operational Self-Awareness In Evolvable Blended Environments, David B. Smith

Publications and Research

The Self-Aware Room (SAR) is a room-scale research environment developed within the larger Balanced Blended Space and Blended Reality Performance System research trajectory. Rather than treating the room as a conventional “smart” environment composed of fixed automation technologies, SAR approaches it as an evolvable blended environment made from physical, virtual, conceptual, sensory, computational, and performative relationships. Its defining feature is not any particular sensor, model, or output device, but the set of transformations through which physical activity becomes structured observation, bounded representation, interpreted state, governed decision, and mediated response.

This paper develops the conceptual and methodological foundations of SAR as …

Learning Casual Structures From Aviation Accident Narratives Using Natural Language Processing And Graph-Based Knowledge Representation, Stephanie Ramsey, Katherine Hoffsetz, Madeline Gorman, Logan Lambeth

Discovery Day - Daytona Beach

Understanding the complex causal relationships underlying aviation accidents is critical for improving safety and preventing future incidents. However, much of this information exists in unstructured narrative reports, making large-scale analysis difficult. This project aims to automatically extract and model causal chains from National Transportation Safety Board (NTSB) accident narratives using a combination of traditional natural language processing (NLP) techniques, transformer-based architectures, and graph-based knowledge representation. Traditional NLP methods, including named entity recognition, dependency parsing, and rule-based pattern matching, will be used to identify structured cause–effect relationships. These approaches will be compared with transformer-based models, including a lightweight encoder for classification …

Sequential Causal Architecture For Multimodal Aviation Accident Prediction, Kaitlyn Cavanaugh, Isaac Morrison

Discovery Day - Daytona Beach

Aviation accidents are rarely the result of a single failure but rather from a complex causal chain of latent failures. While traditional data mining models often predict incident occurrence, they frequently overlook the sequential mechanics defined by known accident causation theoretical frameworks like the Swiss Cheese Model and the FAA's HFACS. This project addresses the need for interpretable, reliable, multi-stage forecasting by proposing a Sequential Causal Architecture that transforms theoretical causation models into a structured Directed Acyclic Graph (DAG) for multimodal accident causation chain prediction. Data from the NTSB and DOT is used and connected together in a meaningful way …

Modeling Aircraft Collision Risk Using Machine Learning And Traffic Density Data Ac, Jadia Renee Ewing, Alexander Van Baelan, Conrad Prisby, Rafal P. Smietana

Discovery Day - Daytona Beach

Air traffic congestion is an increasingly important factor in aviation safety as global flight activity continues to grow. This project investigates whether higher traffic density is associated with an increased risk of aviation incidents and identifies key contributing factors. Using publicly available flight (ADS-B) and incident (NTSB) data, we apply several machine learning models to analyze traffic patterns and predict risk. We begin with logistic regression to evaluate the relationship between density and incident probability, followed by decision trees to extract interpretable rules describing high-risk conditions. K-nearest neighbors (KNN) is used to examine similarity in traffic patterns among incident flights, …

Low-Complexity Polynomial Ring Learning For Quantum Space Assets, Lola Torres

Discovery Day - Daytona Beach

Secure communication for space-based systems requires cryptographic methods that remain both reliable and efficient under strict computational constraints. This work investigates a low-complexity polynomial ring learning algorithm designed for quantum space assets, including satellite–ground communication systems. The project focuses on post-quantum cryptographic principles, where encryption and decryption rely heavily on repeated polynomial operations; this can be computationally expensive with constrained platforms. This is addressed with reformulating polynomial multiplication as a structured linear transformation on coefficient vectors. By representing these operations as matrices with a cyclic structure, the structure allows the use of the discrete Fourier transform (DFT); this will simplify …

Small Uas Detection: Threat Intelligence & Risk Management Project, Tyler Johnson

Discovery Day - Daytona Beach

The TRANSPORTATION SECURITY ADMINISTRATION / FEDERAL AIR MARSHAL SUAS DETECTION: THREAT INTELLIGENCE & RISK MANAGEMENT PROJECT addresses the emerging safety and security challenges posed by the rapid growth of small Unmanned Aircraft Systems (sUAS) in complex airspace environments. This study analyzed 92 days of sensor-captured Remote Identification (RID) data collected near Fort Lauderdale-Hollywood International Airport (FLL) to assess operational behaviors, aviation risk, and ground risk associated with drone activity. The primary objective of this research is to identify patterns of unauthorized or hazardous sUAS operations to enhance situational awareness and inform actionable risk-mitigation strategies. The analysis identified 335 flights from …

Ai-Driven Scheduling Algorithms For Private Aviation, Tayan Benson, Jessica Buskey, Gabriel Camacho, Caitlyn A. Gabrinowitz

Discovery Day - Daytona Beach

Private aviation scheduling is complex and dynamic, requiring frequent aircraft repositioning based on demand and operational constraints, unlike fixed commercial airline schedules. As fleets grow beyond 300 aircraft, traditional deterministic methods become too slow, leading to the use of approaches such as genetic algorithms, but neural network-based methods have not seen in-depth exploration. This project models aircraft scheduling as a network, where airports and flights form a graph. It explores advanced AI methods, including graph neural networks and spatio-temporal graph neural networks (STGNNs), to capture both network structure and time constraints. The goal is to generate efficient daily schedules from …

Machine Learning For Predictive Energy And Emissions Modeling Of Vehicles And Power Grids In The United States, S M Tanvir Faysal Alam Chowdhoury

Dissertations

The environmental benefits of electric vehicle (EV) adoption depend on more than replacing internal combustion engine vehicles with electric powertrains. EV adoption reshapes electricity demand, interacts with regional generation mixes, and influences travel behavior and congestion, creating a coupled transportation-energy system in which vehicle and power-plant emissions must be evaluated together. This dissertation develops machine-learning frameworks for predicting energy consumption and emissions from vehicles and power grids under rising EV adoption. The first component forecasts grid emissions from EV charging. Using simulation data from NREL's Cambium database, a Prophet-based time-series framework predicts carbon dioxide, nitrous oxide, and methane emission rates …

Predicting Student Belonging In Computing Education: A Multimodal Machine Learning Approach Using Eeg And Survey Data, Hannah Moshtaghi

Master's Theses

Measuring students’ sense of belonging, characterized by feelings of acceptance, inclusion, and encouragement from teachers, remains a significant challenge in computing education. Prior research has associated this multidimensional construct with positive academic outcomes and has identified instructors’ growth- and fixed-mindset messaging as a potential influence. However, belonging is a complex and deeply personal experience that is difficult to capture through direct observation alone. Current measurement methods rely on self-report surveys, which may not capture every aspect of an experience that can also involve emotional and cognitive responses.

This thesis investigates whether combining EEG data recorded during a belonging questionnaire with …

Evaluating Machine Learning Models On Classification Of Novel Cyber Attacks In The Healthcare Domain, Promise Ehimen

Dissertations, Theses, and Projects

The increasing adoption of the Internet of Medical Things (IoMT) has improved healthcare delivery through connected medical devices while simultaneously expanding the cybersecurity risks facing healthcare organizations. Although machine learning based intrusion detection systems have demonstrated high detection accuracy, their ability to respond reliably to previously unseen cyberattacks remains uncertain. This study investigated how a Neural Network model and a Logistic Regression model classified novel cyberattacks within the IoMT environment. The Neural Network and Logistic Regression models were both trained and tested using a subset of the CICIoMT2024 benchmark dataset. The Neural Network achieved 99.82% test accuracy and a 0.94 …

Chi Meta-Project Ecosystem Overview - Spring 2026, David B. Smith

Publications and Research

This paper offers a high-level account of the Center for Holistic Integration’s (CHI) meta-project ecosystem as visualized in the included system map. CHI provides an organizational structure framed around persistent meta-projects that support and extend individual initiatives across curriculum, scholarly and applied research, infrastructure, artistic production, AI development, cultural inquiry, and external partnerships. Rather than presenting the map as a static inventory of projects, the paper examines how its core domains function as living systems through which knowledge, tools, documentation, participants, and collaborations can accumulate over time. It also considers how CHI-mediated connectivity, institutional integration, and external funding allow the …

Fairlinked: Data Fairification Tools For Materials Data Science, Van D. Tran, Brandon Lee, Ritika Lamba, Henry Dirks, Quynh D. Tran, Balashanmuga Priyan Rajamohan, Ozan Dernek, Laura S. Bruckman, Yinghui Wu, Erika I. Barcelos, Roger H. French

Student Scholarship

FAIRLinked is a software package created to support the FAIRification of materials science data, ensuring proper alignment with FAIR principles: Findable, Accessible, Interoperable, and Reusable. It is built to be compatible with MDS-Onto, an ontology designed to capture the semantics of various types of materials data, enabling integration and sharing across different research workflows. The package is subdivided into three subpackages: InterfaceMDS, RDFTableConversion, and QBWorkflow. The first subpackage, InterfaceMDS allows users to search for terms using either string search or various filters, explore different domains and subdomains, and add terms to MDS-Onto. RDFTableConversion is used for serialization and deserialization of …

Can Generative Ai Make Farming Decisions? Current Status And Future Pathways: A Case Study In Row Crop Production With Chatgpt, Nipuna Chamara, Yufeng Ge, Joe Luck, Yu Pan, Saleh Taghvaeian, Cory Walters, Christopher Proctor, Daran Rudnick, Daren Redfearn

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The agricultural decision-making process is experience-based, knowledge-dependent, time-sensitive, complex, and driven by historical data. Planting, fertilization, irrigation, and chemigation are key categories in farm decision-making, and currently there is no one-shot decision-support tool that covers all these activities. Generative Artificial Intelligence (AI) models are more advanced than traditional machine learning and deep learning models. These models have been trained on vast amounts of data from the internet, allowing them to accept unstructured data in various forms and generate human-like text, solutions to problems, and scenario predictions. Given this capability, we became interested in exploring the potential of generative AI in …

A Generative Ai-Driven Computational Framework For Industry-Scale Discovery Of Novel Battery Materials, Joy Datta

Dissertations

The growing demand for sustainable, high-energy-density electrochemical storage has motivated the exploration of multivalent-ion batteries based on earth-abundant elements such as aluminum, calcium, magnesium, and zinc. While multivalent charge carriers offer higher theoretical energy density than lithium, their practical deployment is hindered by sluggish ion transport, strong ion-host interactions, and structural degradation of electrode materials. Identifying host materials that can reversibly accommodate multivalent ions while maintaining structural integrity remains a fundamental challenge. The dissertation develops a scalable, end-to-end computational framework that integrates density functional theory (DFT), machine learning (ML), and generative artificial intelligence (GenAI) to accelerate the discovery of next-generation …

Toward Learning-Based Reconstruction And Part Decomposition Of Man-Made 3d Geometry: Neural Implicit Representations And Scalable Supervision, Shen Fan

Dissertations

Digital three-dimensional (3D) models are central to engineering design, analysis, and manufacturing, but learning pipelines for man-made geometry often operate on sampled carriers that do not preserve all of the structure present in exact CAD representations. This dissertation studies learning-based reconstruction and part decomposition for structured man-made 3D geometry, from general object benchmarks to CAD-derived datasets, with a focus on neural implicit representations trained from signed-distance samples, point clouds, and tessellated meshes. The goal is to make these models more accurate, more part-aware, and more consistently supervised.

First, signed distance function (SDF) reconstruction with implicit neural representations is improved through …

Evaluating Soil Health And Crop Yield In Louisiana Agricultural Systems: Impacts Of Best Management Practices And Prediction Models, Hector J. Mendoza Lagos

LSU Doctoral Dissertations

The adoption of conservation management practices is critical for improving soil health, enhancing nutrient use efficiency, and sustaining crop productivity in row crop systems in Louisiana. This study evaluated the role of conservation agronomic practices, soil biochemical indicators, and machine learning predictive models to improve soil nutrient dynamics, soil health indicators, microbial communities (MC), and crop productivity on a corn (Zea mays L.) research plot scale and in a commercial forty-hectare cotton (Gassypium hirsutum L.)-corn-soybean (Glycine max L.) rotation system in northeast Louisiana. The objectives of the study were to evaluate soil nutrient dynamics and MCs under …

Measuring Stock Market Inefficiency Using A Multilayer Composite Efficiency Index: A Case Of The Egyptian Exchange, Patrick K. Owido, Hiroki Sayama

Northeast Journal of Complex Systems (NEJCS)

Financial markets play a critical role in resource allocation. Their performance depends on the decisions of millions of independent investors constantly reacting to one another. Their informational efficiency remains a subject of debate across economic systems. When informational efficiency is present at the weak form, historical price information should not consistently predict future returns. Several empirical tests of this hypothesis often focus on the behavior of aggregate market indices, and use individual efficiency proxies such as autocorrelation, GARCH-type volatility, or entropy-based measures to measure efficiency. This has often yielded mixed results, particularly in emerging markets. Here we show that testing …

Material Costs, Karima Weinman

Masters Theses

This thesis investigates how migration fatality and disappearance data can be reinterpreted through material craft to create a more reflective encounter with information. Working with the Missing Migrants Project's dataset, this project asks how design can communicate dimensions of human loss that conventional data visualization cannot reach.

The work situates contemporary border violence within a longer colonial history, arguing that the logics of surveillance and quantification that structured European imperial expansion persist in the databases that govern mobility in the Mediterranean today.

Terrazzo is a 15th-century Venetian flooring technique built from discarded fragments bound together into a unified surface. This …

An Analytical Framework For Quantifying Urban And Community Resilience To Natural Hazards From Cell-Phone Gps-Location And Traffic-Flow Data, Georgios Chatzikyriakidis

Civil and Environmental Engineering Theses and Dissertations

Urban areas are increasingly exposed to natural hazards while accommodating a growing share of the global population, yet a consistent science-based framework for quantifying urban and community resilience remains lacking. This dissertation develops a physics-based analytical framework grounded in statistical mechanics and the quantitative theory of Brownian motion. A city is conceptualized as a complex medium in which citizens move analogously to Brownian particles within a viscoelastic environment, influenced by socioeconomic interactions and infrastructure functionality.

A central premise is that urban resilience, interpreted as engineering resilience (an outcome), can be quantified through a single metric: the mean-square displacement MSD=⟨r²(t)⟩, of …

Meeting The Moment With Ai-Employer Informed Education, Brent Terwilliger, John Faraca

Publications

As artificial intelligence transforms aviation, aerospace, and autonomy-related sectors, higher education must adapt to meet evolving workforce demands. This session shares emerging findings from a nationwide study led by Embry-Riddle Aeronautical University, focused on employer perceptions of AI adoption, responsible use, and workforce preparedness in domains including uncrewed systems, space systems, robotics, and advanced air mobility. Based on a structured survey and follow-up interviews, the presentation explores how organizations are using AI tools, from generative platforms to enterprise systems, and defining effective and inappropriate use in operational contexts. Participants will gain insight into critical concerns (e.g., data privacy, compliance, security, …

Improving Semantic Precision In Text-To-Image Diffusion Models Via Latent-Space Optimization And Semantically-Parsed Evaluation, Mohammad Rouie Miab

McKelvey School of Engineering Graduate Student Theses & Dissertations

Text-to-image diffusion models can produce visually impressive images from natural-language prompts, but they often fail to satisfy the detailed semantic constraints expressed in compositional prompts. Typical failure modes include omitted objects, merged entities, incorrect quantities, incorrect attribute binding, and leakage of one entity's attributes onto another. This thesis studies the problem of semantic precision in text-to-image generation: how faithfully a generated image satisfies the structured meaning of its prompt.   The thesis makes two linked contributions. First, it presents a training-free inference-time refinement method for diffusion-based image generation. The method operates directly in latent space during denoising and uses noun-phrase-aware cross-attention …

A Forecasting Framework For Distribution Center Capacity Utilization: An Applied Industry Study, Jordan J. Shortt

Data Science Undergraduate Honors Theses

This project develops and evaluates a predictive modeling framework for forecasting distribution center capacity utilization at Company Y, with monthly forecast horizons up to one year. Motivated by the operational challenges of seasonal demand volatility, promotional cycles, and the absence of a formally defined capacity metric, the study first constructs a historical capacity utilization measure from raw warehouse management system data — reconciling item volumes, location dimensions, and utilization factors across all DCs — which serves as the target variable for all modeling work. Four models are developed and evaluated against a naïve seasonal baseline: SARIMA, LightGBM, LSTM, and a …

A New Approach To Generate Combinatorial Patterns In Logical Analysis Of Data And Its Application To Predict College Retention, Salihah Ahmed E. Jaafari

Theses and Dissertations

Student retention and degree completion remain central challenges for higher-education institutions, with significant implications for student success, institutional effectiveness, and public accountability. While advances in predictive analytics have enabled earlier identification of students at risk of withdrawal, many commonly used machine learning approaches suffer from limited interpretability, constraining their practical usefulness for advising, intervention, and policy decision making. This dissertation addresses the problem of predicting student persistence by developing and evaluating optimization based, interpretable classification models within the Logical Analysis of Data (LAD) framework. Building on existing LAD formulations, this research introduces two novel pattern generation models, the Best Term …

Analyzing The Writing Style Of Generative Ai When Prompted With Writing Samples, Samuel Mcdowell

Senior Honors Theses

Authorship attribution is an important topic in today’s world of Large Language Models (LLMs). It is the technology that helps to verify the author of a written work. This study explores whether LLMs can successfully mimic an individual’s writing style if they are given a text sample. A dataset of human-written texts was collected and used to prompt several LLMs to generate new texts that attempt to replicate the original author’s stylistic characteristics. The generated texts were then tested with modern authorship attribution models to determine whether they would be identified as being written by the original author. The results …

The Digital Neuron: Neural Cellular Automata For Neural–Symbolic Translation, Nicole Assenza

SMU Data Science Review

A neural cellular automata (NCA) architecture, referred to as Pluto’s NCA, was developed to characterize bilateral communication and semantic reciprocity between symbolic representations and a spatially distributed update field. The architecture employs an encoder–automata–decoder pipeline that maps symbolic inputs into a multichannel state field and reconstructs them through agreement-driven attractor convergence within a stable semantic attractor landscape. System behavior was evaluated under controlled perturbations, including rhythmic desynchronization, graded ablations, correlated and independent noise, and percolation-based structural degradation. Quantities such as Agreement(t), internal coherence Aᵢ(t), the recovery time constant τ, and the critical percolation threshold pc were measured to assess stability, …

Complex Systems Mapping Of Fiscal Growth Dynamics At Strategic Maritime Chokepoints Using Time-Series Slopes, Rahul Balamurugan, Preethi Nanjundan, Avichal Sharma

Northeast Journal of Complex Systems (NEJCS)

This study examines how maritime and trading states allocate public resources between defence, health, and economic growth around three strategic chokepoints the Strait of Malacca, the Strait of Hormuz, and the Suez Canal. The analysis extends the classic “guns versus butter” framing by treating defence and health spending as co-evolving components of an interconnected fiscal-growth system. Using World Development Indicators data (1999-2024), trend slopes are estimated for military spending (% of GDP), healthcare spending (% of GDP), and GDP growth (annual %). Two derived indicators are computed, a defence-to-health slope ratio (military slope/health slope) and a fiscal-balance proxy (health slope …

Regional Drought Modulation By Enso And Iod As Indicated By The Standardized Precipitation Index, Arpit Tiwari, Preethi Nanjundan, Tanu Sharma, Ravi Ranjan Kumar, Satyaban Bishoyi Ratna

Northeast Journal of Complex Systems (NEJCS)

Understanding the modulation of drought by large-scale ocean–atmosphere teleconnections is crucial for strengthening drought prediction and resilience in India. This study investigates the influence of the El Niño–Southern Oscillation (ENSO) and the Indian Ocean Dipole (IOD) on meteorological drought characteristics across India from 1950 to 2024 using the Standardized Precipitation Index (SPI) at a 12-month timescale. Drought events were quantified in terms of frequency, duration, severity, and intensity and linked to ENSO–IOD variability through composite, correlation, and mediation analyses. Results reveal that El Niño events consistently correspond to widespread and severe droughts, particularly over central and southern India, with drought …

The Waldo Dataset, Mary E. Koone, Rosie Kallie, Vassilis Athisos, Laurel S. Stvan

Computer Science and Engineering Datasets - Archive

Distinct from the task of predicting the author of a document (authorship attribution), we focus on addressing the issue of how to estimate the similarity between the written language styles of authors. To do so, we present a dataset of metadata derived by asking human annotators, who were presented with three documents, to identify which two were written by the same author and which was written by a different author. The dataset has over 400 such annotations, creating a companion to the Amazon Web Services (AWS) customer review dataset, laying the groundwork for crowdsourcing applications to other natural language processing …

Availability Model To Evaluate Ai Data Centers’ Role In Grid Stability, Troy Mcsimov, Trevor S. Kunz, Jeffrey Billo

SMU Data Science Review

The United States has made it clear; it is imperative that the US wins the global AI race. This paper focuses on one of the most challenging puzzle pieces surfaced at the POWER Data Center conference (San Antonio, Sept. 30.); for Electric Reliability Council of Texas (ERCOT) the limiting factor is not generation alone but the need to balance generation and load to preserve grid reliability.

The regulatory landscape fundamentally changed with the passage of Texas Senate Bill 6 in June 2025, which mandates new large loads must "contribute to the recovery of the interconnecting electric utility’s costs" (Texas Legislature, …