Biomedical Engineering and Bioengineering Commons^™

Effect Of Lowest Instrumented Vertebra On Trunk Mobility In Patients With Adolescent Idiopathic Scoliosis Undergoing A Posterior Spinal Fusion, Ubong I. Udoekwere, Joseph Krzak, Adam Graf, Sahar Hassani, Sergey Tarima, Mary Riordan, Peter F. Sturm, Kim W. Hammerberg, Purnendu Gupta, Alireza K. Anissipour, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

Study Design

Prospective.

Objectives

The goal of this study was to evaluate the effect of posterior spinal fusion surgery terminating at different lowest instrumented vertebrae (LIV) on trunk mobility in individuals with adolescent idiopathic scoliosis (AIS).

Summary of Background Data

Posterior spinal fusion with instrumentation is the standard surgical technique employed in AIS for correcting spine deformities with Cobb angles exceeding 50°. Surgical correction of curve deformity reduces trunk mobility and range of motion. However, conflicting findings from previous studies investigating the impact of different LIV levels on the reduction in trunk mobility after surgery have been reported.

Methods

The …

Preliminary Test Of A Real-Time, Interactive Silent Speech Interface Based On Electromagnetic Articulograph, Jun Wang, Ashok Samal, Jordan R. Green

School of Computing: Conference and Workshop Papers

A silent speech interface (SSI) maps articulatory movement data to speech output. Although still in experimental stages, silent speech interfaces hold significant potential for facilitating oral communication in persons after laryngectomy or with other severe voice impairments. Despite the recent efforts on silent speech recognition algorithm development using offline data analysis, online test of SSIs have rarely been conducted. In this paper, we present a preliminary, online test of a real-time, interactive SSI based on electromagnetic motion tracking. The SSI played back synthesized speech sounds in response to the user’s tongue and lip movements. Three English talkers participated in this …

Biomaterial Testing Methodology For Long-Term In Vivo Applications: Silicon Carbide Corrosion Resistance, Biocompatibility And Hemocompatibility, Maysam Nezafati

USF Tampa Graduate Theses and Dissertations

Biomedical devices that function in-vivo offer a tremendous promise to improve the quality of life for many who suffer from disease and trauma. The most important consideration for these devices is that they interact with the physiological environment as designed without initiating a deleterious inflammatory response. ISO 10993 outlines the current international guideline for investigating the biocompatibility of such devices. Numerous groups report the use of ISO 10993 as the basis for their experimental evaluation of candidate materials for neuroprosthetics, as well as other biomedical devices, however most of these reports fail to completely comply with the standard. This leads …

Mathematically Modeling Fetal Electrocardiograms, Samuel Estes, Kiersten Utsey, Erick Kalobwe

Pursuit - The Journal of Undergraduate Research at The University of Tennessee

Abstract

Some of the most common and fatal birth defects are those related to the heart. In adults, possible heart conditions are often identified through the use of an electrocardiogram (ECG). However, due to the presence of other signals and noise in the recording, fetal electrocardiography has not yet proven effective in diagnosing these defects. This paper develops a mathematical model of three-dimensional heart vector trajectories, which was used to generate synthetic maternal and fetal ECG signals. The dipole model is a useful simplification in which the electrical activity of the heart is viewed as a single time-varying vector originating …

Noninvasive Assessment Of Cardiac Abnormalities In Experimental Autoimmune Myocarditis By Magnetic Resonance Microscopy Imaging In The Mouse., Chandirasegaran Massilamany, Vahid Khalilzad-Sharghi, Arunakumar Gangaplara, David Steffen, Shadi F. Othman, Jay Reddy

All Faculty Articles - School of Engineering and Computer Science

Myocarditis is an inflammation of the myocardium, but only -10% of those affected show clinical manifestations of the disease. To study the immune events of myocardial injuries, various mouse models of myocarditis have been widely used. This study involved experimental autoimmune myocarditis (EAM) induced with cardiac myosin heavy chain (Myhc)-α 334-352 in A/J mice; the affected animals develop lymphocytic myocarditis but with no apparent clinical signs. In this model, the utility of magnetic resonance microscopy (MRM) as a non-invasive modality to determine the cardiac structural and functional changes in animals immunized with Myhc-α 334-352 is shown. EAM and healthy mice …

Looking For Your Next Disruptive Technology? Try Student Competitions, Jay R. Goldberg, Phil Weilerstein

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Uncertainty Quantification Driven Predictive Multi-Scale Model For Synthesis Of Mycotoxins, Sourav Banerjee, Gabriel A. Terejanu, Anindya Chanda

Faculty Publications

Many toxic molds synthesize and release an array of poisons, termed mycotoxins that have an enormous impact on human health, agriculture and economy [1]. These molds contaminate our buildings, indoor air and crops, cause life threatening human and animal diseases and reduce agricultural output [2]. In order to design appropriate approaches to minimize the detrimental effects of these fungi, it is essential to develop diagnostic methodologies that can rapidly and accurately determine based on fungal strains and their growth patterns, the extent of mycotoxin mediated damage caused to the environment.Here we developed a novel multi-scale predictive mathematical model that could …

Engineering An In Vitro Metastasis Platform, Justus Carlisle, Mark-Phillip Pebworth

Bioengineering Senior Theses

Although metastasis is the primary cause of cancer deaths and results in 90% of all cancer fatalities currently, all attempts to discover anti-metastatic drugs have failed. Many of the traditional methods of studying cell migration, using two-dimensional (2D) platforms, only study two-dimensional migration, which is fundamentally different and more multifaceted than the three-dimensional migration that occurs in vivo. To more accurately capture this in vivo variation, we developed a two-and-a-half-dimensional (2.5D) cell culture platform to better study three-dimensional (3D) migration. This platform consists of a layer of alginate on top of a monolayer of cells grown on tissue culture polystyrene …

Talens: Genome Surgery, Carson Harms, Serena Lerkantitham

Bioengineering Senior Theses

Genetic engineering has always held great opportunity for the field of gene therapy. If the cause of a genetic disease can be determined, correction of this gene would allow for an efficient and permanent cure. However, current technologies utilizing engineered retroviruses have serious drawbacks that significantly limit their practical applications for gene therapy. In this project we investigate a novel genetic editing technology called TALENs. By utilizing a modular protein isolated from a plant pathogen that can be quickly and efficiently redesigned to recognize and bind to any desired sequence of DNA combined with a nuclease, we can target a …

Mobile Audiometry Application, Kevin Nguyen, Shweta Panditrao

Interdisciplinary Design Senior Theses

The Mobile Audiometry Application hopes to utilize the ubiquity of the mobile device by providing a means of healthcare focused on audiometry. This application enables a mobile device to perform audiometric testing to detect a user's hearing range, and notify the user whether he or she is suffering from hearing loss. This project seeks to fulfill a social need for increased access to hearing testing by providing a portable, affordable, and reliable screening tool that is accurate. The result was sleek application that provided a calibration method, executed an audiometry test using accurate and calibrated files, displayed the results graphically, …

Genome Editing Of Human Ipscs Using The Cas9 System, Cade Ellis Ito, Nick Wolfe

Bioengineering Senior Theses

Recent research advancements in induced pluripotent stem cells (iPSCs) have broadened their capacity for research in specific disease models3 need for effective and robust techniques to detect cell differentiation. Two techniques currently exist to determine cell type; morphology and immunostaining. Although they have been used by researchers for many years, these methods can be unreliable, time-consuming, and very uneconomical. We seek to create a technology that will be more accurate and efficient in detecting differentiation of iPSCs. This will allow researchers greater speed in screening for specific differentiation products, further increasing the utility of iPSCs in medical research. We will …

Reverse Protein Engineering Of Firefly Luciferase, Kahler Bugtong, Skyler Herczeg, Abraham Munoz, Alexandra Obata

Bioengineering Senior Theses

Firefly luciferase is a bioluminescent protein commonly used as a bioluminescent tag in biological studies and applications. However, because the protein is fairly large in size, it is sometimes larger than the molecules it is intended to measure and is therefore not a sufficient tag in smaller applications. The active site of firely luciferase is also not well understood, making it difficult to engineer the protein without affecting its bioluminescent activity. In this paper, we discuss the experimental methods of Reverse Protein Engineering: a bioengineering technology that reduces the size of a protein while retaining its original function. This involves …

Molecular And Device Engineering Towards The Study Of Potential Anti-Mrsa Agents, Powell Fansler, Karla Geisse, Ryan Marshall

Bioengineering Senior Theses

At the intersection of bio-device engineering and bio-pharmaceutical studies, our project involved the design of a hydraulic manifold to be used in isothermal titration calorimetry (ITC), with the ultimate goal of using ITC to study the thermodynamic binding parameters of potential anti-Methicillin Resistant Staphylococcus aureus (MRSA) agents to our drug target, Sortase A. The hydraulic manifold redesign included the analysis of materials such as high density polyethylene (HDPE), polytetrafluorethylene (PTFE, ‘Teflon’), and polycarbonate as well as the implementation of a new construct of the manifold itself. Sortase A is a transpeptidase found in Gram-positive bacteria and catalyses the attachment of …

Commodification Of The Female Egg: Stem Cell Technology And The Future, Rachel Ostander

North Carolina Central University Science & Intellectual Property Law Review

No abstract provided.

Electrochemical Detection Of Arsenic Using A Microfluidic Sensing Platform, Ben Demaree, Allie Sibole, Jessica Vandergiessen

Bioengineering Senior Theses

Arsenic contamination of groundwater is a global health problem affecting millions of people. Long-term exposure to arsenic has been linked to a variety of cancerous and non-cancerous health effects. Current diagnostic technologies for arsenic quantification are limited to either inaccurate colorimetric methods or expensive, off-site lab assays, which are unsuitable for resource-limited settings. To address this need for an affordable and rapid means of sensitive arsenic detection, our design project focuses on the design and fabrication of the first point-of-use microfluidic device capable of electrochemical detection and quantification of arsenic levels in groundwater sources. We fabricate our device rapidly and …

Design Of A Methane-To-Methanol Conversion Device, Pankti Doshi, Jessica Garcia

Bioengineering Senior Theses

The purpose of this project was to develop a device that will make natural gas, primarily methane, an efficient and economical fuel alternative as the world’s petroleum supply is diminished. Presently, methane gas is too costly and dangerous to convert to methanol. The direct oxidation of methane can reduce the processing and transportation costs creating a competitive alternative to petroleum. This device will be marketable to companies interested in alternative fuel sources competitive with petroleum. Entrepreneurs are then expected step in and develop a global market. With the development of our prototypes and running methane and oxygen (or atmospheric oxygen) …

Protein Engineering Of Luciferase To Enhance Bioluminescent Properties, Charles Schwab, Peter Wittig

Bioengineering Senior Theses

Bioluminescence is the ability of naturally occurring organisms to emit light. Many instances of bioluminescence have been identified ranging from fireflies to bacteria. The protein responsible for bioluminescence in all of these organisms is luciferase. The exact function and structure of this protein are still unknown to this day. This project aims at better understanding luciferase as well as enhancing its bioluminescent properties. In order to work with luciferase, we had to isolate all of the genes necessary for bioluminescence. The six genes necessary for bioluminescence are Lux A,B,C,D,E,G. We isolated each of these genes from original bacterial DNA. We …

Designing A Biomimetic Primary Cell-Based 3d Culture System For Neurotoxicity Screening, Teresa Cauvel, Jessca Kosit, Nicolo Mendoza

Bioengineering Senior Theses

Culturing neurons in vitro is a challenging task because they are a highly specialized cell type that reside in a complex and unique environment in the body. The aim of the research presented in the following thesis was to design a biomimetic, three-dimensional scaffold capable of (1) promoting primary neuron maturation and axonal outgrowth and (2) serving as a system for toxicology screening. In the system presented here, neurons were cultured in three-dimensional hydrogels, simulating the physiological environment that these cells experience within the body. In doing so, a biologically relevant response was elicited upon their exposure to acrylamide, a …

Microchip Capillary Electrophoresis, Scott Hardy, Daniel Schull, Mark Vinopal

Bioengineering Senior Theses

For the study of neuromodulation in Cancer borealis we have designed a microfluidic device to separate and detect bioamine concentrations with a high temporal resolution. Our goal is to use this device to measure the concentration of continuous bioamine microdialysis samples directly from the pericardial cavity (the area surrounding the heart) of Cancer borealis. The microfluidic device that we designed is made from polydimethylsiloxane (PDMS) and exhibits an off-channel configuration of capillary electrophoresis (CE) by incorporating micellar electrokinetic chromatography (MEKC). CE is used to separate bioamines based on charge and size due to the applied electrical potential. In the off-channel …

Developent Of A Phospholipid Encapsulation Process For Quantum Dots To Be Used In Biologic Applications, Logan Grimes

Master's Theses

The American Cancer Society predicts that 1,665,540 people will be diagnosed with cancer, and 585,720 people will die from cancer in 2014. One of the most common types of cancer in the United States is skin cancer. Melanoma alone is predicted to account for 10,000 of the cancer related deaths in 2014. As a highly mobile and aggressive form of cancer, melanoma is difficult to fight once it has metastasized through the body. Early detection in such varieties of cancer is critical in improving survival rates in afflicted patients. Present methods of detection rely on visual examination of suspicious regions …