Biomedical Engineering and Bioengineering Commons^™

Studying The Efficacy Of An Injectable 3-Dimensional Fibrin Extracellular Matrix To Characterize The Effects Of Antitumor Agents On Sw620 Cells In A Microfluidic Device, Thèo Anastos

Master's Theses

Colorectal cancer is the third most common cancer in the United States and there is currently a lot of research going into new antitumor agents to kill the cancer. One method for replicating the tumor response to a drug in vivo is by creating an in vitro drug testing model to replicate the in vivo condition. This research project was conducted to determine the efficacy of testing tumor cultures in a microfluidic device as a way to provide accurate drug responses in vitro instead of using in vivo subjects in clinical trials. A total of four experiments were conducted with …

Electro-Muscle-To-Muscle Transfer, Hailey Quinn Casino, Jake Keola Javier, Samuel Joseph Borda, Charlotte Amalie Anderson

Biomedical Engineering

The Electro Muscle to Muscle Transfer (EMMT) system will entail designing, manufacturing, and providing a wearable device that stimulates paralyzed muscles in the hand by sampling and amplifying muscles from the forearm. With further development, the system may be capable of using different muscle inputs other than the forearm muscles along with different stimulated muscle outputs other than the hand. The system functions as a rehabilitative device for spinal cord injuries, irreparable nerve loss and/or damage, and improper neuromuscular function. It is not for total treatment nor for curing of the disabilities listed above but to alleviate the side effects …

Development Of A Robust Methodology To Obtain And Assess Myogenic Precursor Cells For Their Use In Regenerative Therapies, Ricardo Lasa

Master's Theses

Peripheral arterial occlusive disease (PAOD) is characterized by buildup of atherosclerotic plaque in peripheral arteries that leads to an occlusion that can interrupt the supply of blood to the peripheral tissue, causing downstream tissue ischemia/hypoxia. PAOD is estimated to affect over 200 million patients worldwide. Current surgical revascularization treatments can be effective in about half of the patient population, leading to a significant number of patients with no treatment options beyond pharmacological intervention and lifestyle modification. The decrease in blood flow downstream of the occlusion leads to increased blood pressure gradient in the microvasculature, specifically in vessels that connect arterial …

Adaptive Laboratory Evolution Of Scenedesmus Obliquus For Increased Carbohydrate Content And Biomass Productivity, Nahel Ali

Master's Theses

The economics of microalgal bioproduct commercialization would benefit from increased accumulation of energy storage compounds, such as carbohydrates and lipids, and increased biomass productivity. This thesis explores two adaptive laboratory evolution strategies for improving Scenedesmus obliquus: single UV-mutagenesis and low light cultivation at a high dilution rate to produce cultigens with greater carbohydrate content and iterative UV-mutagenesis and selection under outdoor conditions in a raceway pond at a high dilution rate to increase biomass productivity.

Two cultigens were generated with the goal of increased carbohydrate content: K5 and K7. Both were mutagenized for 5 seconds and cultivated in 50-mL …

The Effect Of Focused Ultrasound On Altering The Diameter Class Of Nerve Fibers Contributing To A Compound Evoked Potential, Analyzed Using A Perturbative Decomposition Technique., Megan Wurden

Master's Theses

Peripheral neuropathies are disorders that involve the damage of peripheral nerve fibers, affecting the ability of different parts of the body to communicate. A differentiating factor in diagnosis between various clinical conditions can be which size class of nerve fibers are affected. A nerve conduction velocity test can be used to assess the viability of the nerve but is a single-parameter test and gives no information about the population characteristics of the remaining active fibers. A method developed and previously reported by Szlavik (2016) utilizes a mathematical perturbed decomposition to determine the normalized frequency of each size class of fiber …

Gyroscopic Human Balance Device, Randy Lam Hau, Spencer Ross, Yael Farkash

Biomedical Engineering

This project’s sponsor, Charlie Guitierrez, has decades of experience building assistive walking devices for the wheelchair bound population. During his work, he noticed that many of his clients retained some ability to balance themselves and so theorized that they would be able to walk independently if given some form of assistance. This assistance could potentially be in the form of a wearable gyroscope. Gyroscopes are commonly used to stabilize objects subjected to instability, such as bicycles, motorcycles, and ships. Thus, a wearable gyroscope would assist its user in maintaining overall stability by imparting reactive torques and forces if the user …

Hypoxic Incubation Chamber, Makenzie Jones, Andrea Skattenborg, Henry Elsner

Biomedical Engineering

In developing a model to test anti-tumor drugs, Dr. Christopher Heylman’s lab requires the ability to culture cells in a hypoxic environment. The purpose of this project was to make this possible. Funding for this project comes from the Biomedical Engineering Department, the Hannah-Forbes Fund, and Dr. Heylman’s lab. The chamber must be able to reach a user-defined oxygen concentration and hold that concentration for 48 hours while creating an environment conducive to cell culture. Importantly, the chamber must also be sterilizable and cleanable for repeated use. While several products exist to create hypoxic environments for cell culture, they are …

Conventional Immunomarkers Stain A Fraction Of Astrocytes In Vitro: A Comparison Of Rat Cortical And Spinal Cord Astrocytes In Naïve And Stimulated Cultures, Bailey Balouch, Jessica L. Funnell, Alexis M. Ziemba, Devan L. Puhl, Kathy Lin, Manoj K. Gottipati, Ryan J. Gilbert

Chemical and Biochemical Engineering Faculty Research & Creative Works

Astrocytes are responsible for a wide variety of essential functions throughout the central nervous system. The protein markers glial fibrillary acidic protein (GFAP), glutamate aspartate transporter (GLAST), glutamate transporter-1 (GLT-1), glutamine synthetase (GS), 10-formyltetrahydrofolate dehydrogenase (ALDH1L1), and the transcription factor SOX9 are routinely used to label astrocytes in primary rodent cultures. However, GLAST, GLT-1, GS, and SOX9 are also produced by microglia and oligodendrocytes and GFAP, GLAST, GLT-1, and GS production levels are affected by astrocyte phenotypic changes associated with reactive astrogliosis. No group has performed a comprehensive immunocytochemical evaluation to quantify the percentage of cells labeled by these markers …

Biomechanical Analysis Of Distal Stent-Graft-Induced New Entry (Sine) Formation In Aortic Dissection Patients, Tan Wei Ting

Student Works (2020-2029)

Distal stent graft-induced new entry (dSINE) is a post-treatment complication with a mortality rate of 26.1-28.6% in patients with aortic dissection (AD). dSINE creates a new path for blood flow, leading to the formation of false lumen, aneurysmal expansion, and aortic rupture. These complications necessitate re-intervention in 30-60% patients. In this study, computational approach was used to investigate potential risk factors for dSINE in aortic dissection patients. Patient-specific simulations were performed based on post thoracic endovascular aortic repair (TEVAR) computed tomography images acquired from six patients (3 dSINE and 3 non-dSINE) to analyse the correlation between anatomical characteristics and stress/strain …

Biomechanical Determinants Of Shuttlecock Speed In The Forehand Jumping Smash By Elite Male Malaysian Badminton Players, Yuvaraj Ramasamy

Student Works (2020-2029)

Badminton is the fastest racket sport in the world with smash speeds reaching over 111 m/s (400 kph). This study examined the forehand jump smash in badminton using synchronised force plates and full-body motion capture to quantify contributions to shuttlecock speed through correlations. Nineteen elite male Malaysian badminton players were recorded performing forehand jump smashes with the fastest, most accurate jump smash from each player analysed. The fastest smash by each participant was on average 97 m/s with a peak of 105 m/s. A correlational analysis revealed that a faster smash speed was characterised by a more internally rotated shoulder, …

Oxidation Chemistry Of Catechol Utilized In Designing Stimuli-Responsive Adhesives And Antipathogenic Biomaterials, Rattapol Pinnataip, Bruce Lee

Michigan Tech Publications, Part 1

Mussel foot proteins (Mfps) contain a large amount of the catecholic amino acid, DOPA, allowing the marine organism to anchor themselves onto various surfaces in a turbulent and wet environment. Modification of polymers with catechol imparts these materials with a strong, wet adhesive property. The oxidation chemistry and oxidation state of catechol are critical to the design of synthetic adhesives and biomaterials. In this Mini-Review, the effect of catechol oxidation state on adhesion, oxidation-mediated catechol cross-linking, and the generation of reactive oxygen species (ROS) during catechol oxidation are reviewed. Finally, the tuning of catechol oxidation state in designing stimuli-responsive adhesives …

An Investigation Of Cross-Links On Crystallization And Degradation In A Novel, Photocross-Linkable Poly (Lactic Acid) System, Nicholas Baksh

USF Tampa Graduate Theses and Dissertations

Polymeric molecular structure consists of repeating units bonded together. Mechanicalproperties can be altered without affecting chemical makeup by altering the number of these units. Small molecules can be introduced and/or polymers can be modified to form bonds between molecular chains. Cross-linking, as this is called, also introduces mechanical variation with minimal effects on chemical composition. Lastly, polymer chains reorient themselves in response to intermolecular forces. This temperature dependent response is known as crystallization. Although chemistry is unaltered, mechanical properties can depend highly on the percent of the sample that is crystallized.

Cross-linking is known to enhance the mechanical properties of …

A Bisphosphonate With A Low Hydroxyapatite Binding Affinity Prevents Bone Loss In Mice After Ovariectomy And Reverses Rapidly With Treatment Cessation, Abigail A. Coffman, Jelena Basta-Pljakic, Rosa M. Guerra, Frank H. Ebetino, Mark W. Lundy, Robert J. Majeska, Mitchell B. Schaffler

Publications and Research

Bisphosphonates (BPs) are a mainstay of osteoporosis treatment; however, concerns about bone health based on oversuppression of remodeling remain. Long-term bone remodeling suppression adversely affects bone material properties with microdamage accumulation and reduced fracture toughness in animals and increases in matrix mineralization and atypical femur fractures in patients. Although a “drug holiday” from BPs to restore remodeling and improve bone quality seems reasonable, clinical BPs have long functional half-lives because of their high hydroxyapatite (HAP) binding affinities. This places a practical limit on the reversibility and effectiveness of a drug holiday. BPs with low HAP affinity and strong osteoclast inhibition …

Establishing A Mechanistic Link Between Disturbed Flow And Aneurysm Formation In A 3d Cerebral Bifurcation Model, Nesrine Bouhrira

Theses and Dissertations

The effect of disturbed flow profiles on the endothelium have been studied extensively in systemic vasculature, but less is known about the response of the blood-brain barrier (BBB) to these flow regimes. Here we investigate the effect of steady and pulsatile disturbed flow on the integrity of the BBB using a three-dimensional, perfusable bifurcation model consisting of a co-culture of endothelial cells with mural and glial cells. Experimental flow patterns predicted by computational fluid dynamics mimic in vivo flow regimes, specifically the presence of a recirculation zone immediately downstream of the bifurcation reveal periodic changes in the instantaneous shear stress …

Deep Learning-Based Breast Cancer Detection And Classification Using Histopathology Images, Ghulam Murtaza

Student Works (2020-2029)

Cancer disease is drastically increasing worldwide over the past few years. Among all types of cancers in women, breast cancer (BrC) is the main cause of abnormal deaths. For a confident diagnosis of BrC, histopathology (Hp) images are usually suggested by the doctors. BrC detection is a diagnostic test for benign (non-cancerous) and malignant (cancerous) breast tumors (BrT). Once the BrT is diagnosed, then it needs to be classified for subtypes of benign and malignant to start specific treatment. Several studies developed BrC detection and classification models using Hp images. However, the existing models required high computational resources, long training …

Managing Vibration Training Safety By Using Knee Flexion Angle And Rating Perceived Exertion, Long-Ren Chuang, Wen-Wen Yang, Po-Ling Chang, Vincent Chiun-Fan Chen, Chiang Liu, Tzyy-Yuang Shiang

Engineering Science Faculty Publications

Whole-body vibration (WBV) is commonly applied in exercise and rehabilitation and its safety issues have been a major concern. Vibration measured using accelerometers can be used to further analyze the vibration transmissibility. Optimal bending angles and rating of perceived exertion (RPE) evaluations have not been sufficiently explored to mitigate the adverse effect. Therefore, the aims of this study were to investigate the effect of various knee flexion angles on the transmissibility to the head and knee, the RPE during WBV exposure, and the link between the transmissibility to the head and the RPE. Sixteen participants randomly performed static squats with …

Cyclic Damage Accumulation In The Femoral Constructs Made With Cephalomedullary Nails, Farah Hamandi, Alyssa Whitney, Mark H. Stouffer, Michael J. Prayson, Jorn Rittweger, Tarun Goswami

Biomedical, Industrial & Human Factors Engineering Faculty Publications

Background: The purpose of this study was to evaluate the risk of peri-prosthetic fracture of constructs made with cephalomedullary (CM) long and short nails. The nails were made with titanium alloy (Ti-6Al-4V) and stainless steel (SS 316L). Methods: Biomechanical evaluation of CM nail constructs was carried out with regard to post-primary healing to determine the risk of peri-implant/peri-prosthetic fractures. Therefore, this research comprised of, non-fractured, twenty-eight pairs of cadaveric femora that were randomized and implanted with four types of fixation CM nails resulting in four groups. These constructs were cyclically tested in bi-axial mode for up to 30,000 cycles. All …

Preparation Of Nanoemulsion Using Lipase-Synthesized Glucose Monooleate Through Low Energy Technique, Muhammad Fakhrurazi Ahmad Fadzil

Student Works (2020-2029)

In this study, glucose monooleate (GluO) was synthesized and compared to its counterpart i.e. Tween-80 (Tw-80) and Span-80 (Sp-80) to investigate the influence of the different hydrophilic head structure of the surfactants on emulsification property. Utilizing sugar molecules like glucose as the hydrophilic head group of surfactants is of interest as it has a high potential to be used as a targeted delivery agent. The main objective of this study is to investigate the capability of lipase synthesized GluO in the formation of O/W nanoemulsion in four different types of vegetable oils that are sunflower oil, olive oil, palm oil, …

Deciphering And Engineering An Unprecedented Fungal Biosynthetic Pathway For Expanded Chemical Diversity In Flavonoids, Jixun Zhan

Funded Research Records

No abstract provided.

Principles For Determining The Motion Of Blood Through Arteries, Sylvio R. Bistafa

Euleriana

Translation of Principia pro motu sanguinis per arterias determinando (E855). This work of 1775 by L. Euler is considered to be the first mathematical treatment of circulatory physiology and hemodynamics.