Agricultural Science Commons^™

Protocol For Indicator Scoring In The Soil Management Assessment Framework (Smaf), Brian J. Wienhold, D.L. Karlen, S.S. Andrews, D.E. Stott

Douglas L Karlen

Assessment tools are needed to evaluate agronomic management effects on critical soil functions such as carbon sequestration, nutrient cycling and water partitioning. These tools need to be flexible in terms of selection of soil functions to be assessed and indicators to be measured to ensure that assessments are appropriate for the management goals. The soil management assessment framework (SMAF) is being developed to meet this need. The SMAF uses soil physical, chemical and biological indicator data to assess management effects on soil function using a three-step process for (1) indicator selection, (2) indicator interpretation and (3) integration into an index. …

Review And Interpretation: Nitrogen Management Strategies To Reduce Nitrate Leaching In Tile-Drained Midwestern Soils, Dana L. Dinnes, Douglas L. Karlen, Dan B. Jaynes, Thomas C. Kaspar, Jerry L. Hatfield, Thomas S. Colvin, Cynthia A. Cambardella

Douglas L Karlen

Balancing the amount of N needed for optimum plant growth while minimizing the NO3 that is transported to ground and surface waters remains a major challenge for everyone attempting to understand and improve agricultural nutrient use efficiency. Our objectives for this review are to examine how changes in agricultural management practices during the past century have affected N in Midwestern soils and to identify the types of research and management practices needed to reduce the potential for nonpoint NO3 leakage into water resources. Inherent soil characteristics and management practices contributing to nonpoint NO3 loss from Midwestern soils, the impact of …

Fluid Fertilizer’S Role In Sustaining Soils Used For Bio-Fuels Production, John L. Kovar, Douglas Karlen

Douglas L Karlen

The short- and long-term effects on soil nutrient cycling, physical properties, and biological activity of striving for higher grain yields and removing crop residues for bio-fuels production must be understood to provide more quantitative crop and soil management guidelines. This study focuses on potassium (K) and sulfur (S) requirements of corn (Zea mays L.) grown for bioenergy feedstock production. Our objectives for 2008 were to: i) evaluate the performance of several S fertilizers, including liquid ammonium thiosulfate (12-0-0-26S), as S sources for corn grown in Iowa, and ii) establish a comprehensive tillage, nutrient management, crop residue removal, and cover crop …

Protocol For Enrichment Of The Membrane Proteome Of Mature Tomato Pollen, Puneet Paul, Palak Chaturvedi, Anida Mesihovic, Arindam Ghatak, Wolfram Weckwerth, Enrico Schleiff

Department of Agronomy and Horticulture: Faculty Publications

We established and elaborated on a method to enrich the membrane proteome of mature pollen from economically relevant crop using the example of Solanum lycopersicum (tomato). To isolate the pollen protein fraction enriched in membrane proteins, a high salt concentration (750 mM of sodium chloride) was used. The membrane protein-enriched fraction was then subjected to shotgun proteomics for identification of proteins, followed by in silico analysis to annotate and classify the detected proteins.

Hanford Ffa Ornamental Horticulture Unit Master Plan, Savanah Diane Rhine, Russell Alan Zimmerman

Agricultural Education and Communication

This project is intended to develop a more functional plan for the Ornamental Horticulture (OH) Unit at the Hanford Agriculture Program. The ag program combines all three high schools in Hanford resulting in over 1,000 students; however, a majority of these students are not in the OH Career Pathway due to a lack of a constant, fully functional unit. As a comprehensive agriculture program, it is crucial that it incorporates all aspects of agriculture, not just animal science and agricultural mechanics.

This project will provide the Hanford agriculture program with a plan to be implemented so that they may have …

Planning For The Proposed Peel Food Zone, Ghd

Natural resources commissioned reports

Transform Peel is a $49m Royalties for Regions funded program. This program is broadly regarded as transformational for the Peel region in terms of job creation, sustainable growth and economic development. The Peel Development Commission and its partners, intend to implement this program over 35 years where projections estimate that 35 000 jobs will be created generating an approximate $16.2b per annum economic output by 2050. Located in the Shires of Murray and Serpentine Jarrahdale, the program comprises three integrated, strategic elements: Peel Food Zone; Peel Business Park; Peel Integrated Water Initiative.

The Department of Agriculture and Food, Western Australia …

Transcriptomic Resources For The Medicinal Legume Mucuna Pruriens: De Novo Transcriptome Assembly, Annotation, Identification And Validation Of Est-Ssr Markers, N. Sathyanarayana, Ranjith Kumar Pittala, Pankaj Kumar Tripathi, Ratan Chopra, Heikham Russiachand Singh, Vikas Belamkar, Pardeep Kumar Bhardwaj, Jeff J. Doyle, Ashley N. Egan

Department of Agronomy and Horticulture: Faculty Publications

Background:

The medicinal legume Mucuna pruriens (L.) DC. has attracted attention worldwide as a source of the anti-Parkinson’s drug L-Dopa. It is also a popular green manure cover crop that offers many agronomic benefits including high protein content, nitrogen fixation and soil nutrients. The plant currently lacks genomic resources and there is limited knowledge on gene expression, metabolic pathways, and genetics of secondary metabolite production. Here, we present transcriptomic resources for M. pruriens, including a de novo transcriptome assembly and annotation, as well as differential transcript expression analyses between root, leaf, and pod tissues. We also develop microsatellite markers …

A Comprehensive Analysis Of Alternative Splicing In Paleopolyploid Maize, Wenbin Mei, Sanzhen Liu, James C. Schnable, Cheng-Ting Yeh, Nathan M. Springer, Patrick S. Schnable, William Brad Barbazuk

Department of Agronomy and Horticulture: Faculty Publications

Identifying and characterizing alternative splicing (AS) enables our understanding of the biological role of transcript isoform diversity. This study describes the use of publicly available RNA-Seq data to identify and characterize the global diversity of AS isoforms in maize using the inbred lines B73 and Mo17, and a related species, sorghum. Identification and characterization of AS within maize tissues revealed that genes expressed in seed exhibit the largest differential AS relative to other tissues examined. Additionally, differences in AS between the two genotypes B73 and Mo17 are greatest within genes expressed in seed. We demonstrate that changes in the level …

The Effect Of Cattle Management On Soil Carbon: Implications For Climate Change, Kelly M. Livernoche

Masters Theses, 2010-2019

In naturally occurring ecosystems, forests function as substantial carbon sinks, storing carbon in soil and in biomass that would otherwise exist in the atmosphere as carbon dioxide. The conversion of forested land to cattle pastures and their associated operational processes are noteworthy contributors to recent increases in global carbon emissions and subsequent climate change. However, appropriately managed cattle pastures have potential to be reservoirs for carbon. Rotational cattle pastures, where cattle are moved between enclosed sections of pasture, may improve soil carbon content compared to conventional practices. In rotational cattle pastures, a more even distribution of manure increases plant biomass, …

Evaluation Of The Correlation Between The Oxidation Reduction Potential And Free Chlorine Residual For Different Chlorine Sources Used In Poultry Drinking Water Sanitation, Samantha Renee Cox

Graduate Theses and Dissertations

A critical component in commercial poultry production is to ensure birds are provided clean, quality water. Multiple disinfectants can be utilized to optimize a good water quality program. The goal of these water disinfectants is to greatly reduce or eliminate the presence of all bacteria. In recent years, the oxidation-reduction potential (ORP) meter has been a tool utilized by the poultry industry to monitor chlorine efficacy in drinking water. An ORP reading of 650-750 millivolts (mV) has become the industry standard for assuring an acceptable sanitizing residual of free chlorine is present for controlling microbial contamination regardless of the actual …

Precision Drought Stress In Orchards: Rootstock Evaluation, Trunk Hydration And Canopy Temperature, Lance V. Stott

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Tree fruit crops are of high value, but use a lot of water. Precision irrigation has the potential to save water while simultaneously improving crop quality. The timing and method of precision water stress in various tree fruit crops has been widely studied. However, in order to successfully employ precision irrigation methods in orchards, an accurate measurement of tree water status is required. Currently, stem water potential is the preferred indicator. However, this measurement is tedious and cannot be automated. Because measurements must be taken near solar noon (approximately 1:30 PM MDT in the summer in northern Utah), the number …

Temporal Evaluation Of Corn Respiration Rates Using Pressure Sensors, Gagandeep Singh Ubhi

Graduate Theses and Dissertations

High respiration rate of a grain indicates faster degradation of its dry matter. Proper grain management requires chronological and precise measurements of carbon dioxide evolved from grain respiration during the postharvest storage duration. Therefore the main goal of this research was to develop a new technique that evaluates temporal corn respiration rate using pressure sensors. It was based on measuring pressure drop associated with the grain respiration in a closed container and using it to calculate the grain respiration rates.

Dry corn (Zea Mays L.) was procured from a local farmer and stored at 4ºC. Corn rewetting technique was applied …

Phenotypic Variation And Genetic Purity Of The Original 'Prime-Jim®' X 'Arapaho' Population, Loren M. Luther

Horticulture Undergraduate Honors Theses

In 2013, Castro et al., produced the first linkage map for primocane-fruiting blackberries using the cross ‘Prime-Jim®’ x ‘Arapaho.’ This mapping population has been maintained since the original experiment with the hopes of conducting future studies. Further research was determined to be needed on the population to better characterize additional phenotypic traits, and since nine years had passed since the seedlings were established, there was a need to assess the continued genetic purity of the population using molecular methods. Phenotypic data was collected to analyze the variation of the population including soluble solids content, titratable acidity, average weight, shape, and …

Characterization Of Candidate Compound For Control Of Barnyardgrass And Other Troublesome Weeds In Rice, Michael Ryan Miller

Graduate Theses and Dissertations

Barnyardgrass remains one of the most difficult weeds to manage in rice. As herbicide resistance in this species, as well as others, continues to increase new control options are needed. Dow AgroSciences recently discovered and is developing a new herbicide for rice which is the primary focus of this research. Experiments were conducted to characterize this new herbicide for its use and effectiveness in midsouthern U.S. rice systems. The research conducted herein covers various aspects of herbicide characterization including: barnyardgrass dose response, accession testing, spectrum of control and tank-mix capability, application optimization, soil carryover and plant back determination, drift onto …

Protein, Methionine, And Cysteine Upregulation In Phaseolus Vulgaris ‘Black Turtle Bean’ Seeds Through Sulfur Fertilization At V2 And R2 Stages Of Growth, Hannah Paige Barry

Masters Theses

The purpose of this research was to increase protein, methionine, and cysteine content in Phaseolus vulgaris L., common bean in relation to the inhibitory compound tannin. Previous research has shown that sulfur fertilization increases total protein, methionine and cysteine content in various crops, but always in tandem with inhibitory compound increases. If successful, the resulting bean seed will have a better nutrient profile for malnourished populations around the world.

Granular gypsum was applied at 0 kg S ha^-1 [kilograms of sulfur per hectare], 10 kg S ha^-1, 20 kg S ha^-1, 40 kg S ha …

Nutrient Loading Reduction In A Tile Drained Agricultural Watershed Through Watershed-Scale Cover Cropping: A High Resolution Analysis, Benjamin Gerald Bruening

Theses and Dissertations

Nutrient pollution originating from agricultural regions in the Midwest is a serious issue, leading to pollution of drinking water sources as well as large hypoxic zones in the Gulf of Mexico. The source of much of this contamination has been shown to be runoff from agricultural fields in the Upper Mississippi River Basin. One method that has been shown to reduce this pollution from the Upper Mississippi River Basin is the planting of winter cover crops. Winter cover crops such as rye and tillage radish have been shown to significantly reduce nitrate exported from agricultural fields, even in tile-drained watersheds …

Mechanical Harvesting Effectively Controls Young Typha Spp. Invasion And Unmanned Aerial Vehicle Data Enhances Post-Treatment Monitoring, Shane C. Lishawa, Brendan D. Carson, Jodi S. Brandt, Jason M. Tallant, Nicholas Reo, Dennis Albert, Andrew Monks, Joseph Lautenbach, Eric Clark

Dartmouth Scholarship

The ecological impacts of invasive plants increase dramatically with time since invasion. Targeting young populations for treatment is therefore an economically and ecologically effective management approach, especially when linked to post-treatment monitoring to evaluate the efficacy of management. However, collecting detailed field-based post-treatment data is prohibitively expensive, typically resulting in inadequate documentation of the ecological effects of invasive plant management.

Alternative approaches, such as remote detection with unmanned aerial vehicles (UAV), provide an opportunity to advance the science and practice of restoration ecology. In this study, we sought to determine the plant community response to different mechanical removal treatments to …

Determining The Effects Of Sulfur Fertility Levels On Edamame Soybean [ Glycine Max ( L. ) Merrill ] Protein Components, Theoneste Nzaranyimana

Theses and Dissertations

Edamame [Glycine max (L.) Merr.] a vegetable type soybean is harvested and consumed before reaching its maturity stage (R6). Its health properties drew attention to U.S. consumers because of its high protein content. Proteins are the major structural component of all cells in the living organisms. They are made of essential and non-essential amino acids which play a big role in growth and development and are source of energy. Proteins act as enzymes, antibodies, and hormones and blood protein. Sulfur (S) is a component of the amino acids cysteine (Cys) and methionine (Met) which are the building blocks for proteins. …

Winter Rye Cover Crop Biomass Production, Degradation, And N Recycling, J. L. Pantoja, J. E. Sawyer, D. W. Barker

John E. Sawyer

Winter rye (Secale cereale L.) as a cover crop can take up residual inorganic N between annual row crops and therefore be used to help reduce NO3 -–N loss from fields and movement to water systems. However, does the rye N uptake affect N recycling to soil and add to plant available N? The rye carbon:nitrogen (C:N) ratio could also influence N recycling. The objectives of this study were to evaluate rye biomass degradation and N recycling after spring rye termination in a no-till corn (Zea mays L.) - soybean [Glycine max. (L.) Merr.] rotation. A two year experiment (2010-2011) …

In-Season Nitrogen Fertilization Of Soybean, J. E. Sawyer, D. W. Barker

John E. Sawyer

Nitrogen (N) fertilization is not a traditional nutrient management practice for soybean production in Iowa. Soybean is a legume plant and is assumed to adequately obtain needed N through symbiotic fixation. However, there has been interest over the years in using N fertilization to increase yield and grain protein due to the recognition of the large N requirement associated with high yields. Depending on the soil residual inorganic N level and soil N mineralization characteristics, approximately 40 to 75% of the N in a mature soybean plant is derived from the soil (Shibles, 1998). Also, soybean seems to require this …