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The Contribution Of Local And Transport Processes To Phytoplankton Biomass Variability Over Different Timescales In The Upper James River, Virginia, Qubin Qin, Jian Shen 2018 Virginia Institute of Marine Science

The Contribution Of Local And Transport Processes To Phytoplankton Biomass Variability Over Different Timescales In The Upper James River, Virginia, Qubin Qin, Jian Shen

Articles

Although both local processes (photosynthesis, respiration, grazing, and settling), and transport processes (advective transport and diffusive transport) significantly affect local phytoplankton dynamics, it is difficult to separate their contributions and to investigate the relative importance of each process to the local variability of phytoplankton biomass over different timescales. A method of using the transport rate is introduced to quantify the contribution of transport processes. By combining the time-varying transport rate and high-frequency observed chlorophyll a data, we can explicitly examine the impact of local and transport processes on phytoplankton biomass over a range of timescales from hourly to annually. For ...


The Manuscript Works Of S. Fred Prince (1857-1951), Sarah Burke Cahalan, Jason W. Dean 2018 University of Dayton

The Manuscript Works Of S. Fred Prince (1857-1951), Sarah Burke Cahalan, Jason W. Dean

Marian Library/IMRI Faculty Publications

S. Fred Prince, a botanical illustrator and amateur scientist, is a largely unknown artist whose work on the American landscape demonstrates his eligibility to be considered in the lineage of self-taught illustrator-naturalists such as Mark Catesby and Genevieve Jones. In this article, we present a survey of extant Prince materials identified at time of writing, describing their contents and physical characteristics. Beyond this survey and description, we also provide a biographical sketch and timeline of Prince's life.


Altering Oligomerization Of Epha2 Via Mutations In The Intracellular Domain, Ryan W. Lingerak 2018 The University of Akron

Altering Oligomerization Of Epha2 Via Mutations In The Intracellular Domain, Ryan W. Lingerak

Honors Research Projects

Eph receptor tyrosine kinases (RTKs) are activated by membrane-bound ligands called ephrins. Eph RTKs are divided into two subclasses, each activated by a specific classes of the ligand ephrin. The overexpression of Eph receptors is correlated to cancer cell metastasis in several different types of cancers. Studies with the EphA2 extracellular domain (ECD) and ephrinA1 ligand have shown that upon binding of ephrin to the receptor, EphA2 undergoes increased oligomerization and activation. This indicates that oligomerization is intimately connected to kinase activity. High resolution crystal structures of the EphA2 ECD have revealed some details of these ligand bound oligomers, as ...


Potential For Climate Induced Methane Hydrate Dissociation, Graham MacWilliams 2018 Pomona College

Potential For Climate Induced Methane Hydrate Dissociation, Graham Macwilliams

Pomona Senior Theses

Methane hydrates are frozen deposits of methane and water found in high pressure or low temperature sediments. When these deposits destabilize, large quantities of methane can be emitted into the atmosphere. This is significant to climate change because methane has 25 times more greenhouse gas potential than Carbon Dioxide. Worldwide, it is estimated there are between 2500 and 10000 gigatons of methane stored in hydrate deposits. This represents more carbon than all fossil fuels on Earth. It is estimated that between 200 and 2000 gigatons of methane are stored in hydrates in Arctic waters acutely vulnerable to greenhouse warming. Over ...


Economic Growth And Changes In Forested Areas In Southeast Asia: Is Environmental Kuznets Curve Still Relevant?, Lan Thi Ngoc Nguyen 2018 Hollins University

Economic Growth And Changes In Forested Areas In Southeast Asia: Is Environmental Kuznets Curve Still Relevant?, Lan Thi Ngoc Nguyen

Undergraduate Honors Theses

The environmental history of the twentieth century in Southeast Asia reveals tremendous loss of forested areas as a consequence of unprecedented economic transformations and unrestrained globalization. Featuring some of the world’s fastest-growing economies, Southeast Asia has been experiencing fundamental changes in its economic structure, sociopolitical institutions, and the rate of natural resources extraction and depletion, including deforestation. This study reexamines evidence of the (EKC) hypothesis in light of the deforestation the above region experienced over the period 1990-2013. We use the change in forest cover as an indicator for environmental degradation. A panel co-integration approach is invoked to investigate ...


Seasonal Variation Of Macrolide Resistance Gene Abundances In The South Fork Iowa River Watershed, Elizabeth Luby Rieki, Thomas B. Moorman, Elizabeth L. Douglass, Michelle L. Soupir 2018 Iowa State University

Seasonal Variation Of Macrolide Resistance Gene Abundances In The South Fork Iowa River Watershed, Elizabeth Luby Rieki, Thomas B. Moorman, Elizabeth L. Douglass, Michelle L. Soupir

Agricultural and Biosystems Engineering Publications

The Midwestern United States is dominated by agricultural production with high concentrations of swine, leading to application of swine manure onto lands with artificial subsurface drainage. Previous reports have indicated elevated levels of antibiotic resistance genes (ARGs) in surface water and groundwater around confined animal feeding operations which administer antimicrobials. While previous studies have examined the occurrence of ARGs around confined swine feeding operations, little information is known how their transport from tile-drained fields receiving swine manure application impacts downstream environments. To further our knowledge in this area, water samples were collected from five locations in the agriculturally dominated South ...


The Effects Of Continuous Insulin Pump Therapy On Glycemic Control In Pregnant Type 1 Diabetics, Kimberly Kelsey 2017 Dominican University of California

The Effects Of Continuous Insulin Pump Therapy On Glycemic Control In Pregnant Type 1 Diabetics, Kimberly Kelsey

Senior Theses and Capstone Projects

Type 1 Diabetics have various ways of managing their diabetes that have been studied for their effectiveness. Pregnancy in the Type 1 Diabetic has been understudied. It is known that Diabetics in general have poorer pregnancy outcomes because of poor glycemic control. This coupled with the fact that the body needs 3-4 times more insulin as pregnancy comes to an end makes managing blood glucose levels challenging for diabetics (Lowdermilk, 2016, p. 689). For the Type 1 Diabetic, there are two main ways to control diabetes: multiple daily injections using at least two type of insulin and continuous subcutaneous insulin ...


Tea Induction Of Cyp6a8 Promoter In Drosophila Melanogaster, Fiona Retzer 2017 University of Tennessee, Knoxville

Tea Induction Of Cyp6a8 Promoter In Drosophila Melanogaster, Fiona Retzer

University of Tennessee Honors Thesis Projects

No abstract provided.


Shallow Aggregate Ebb-And-Flow System For Greenhouse Lettuce Production, Joseph Chidiac 2017 University of Arkansas, Fayetteville

Shallow Aggregate Ebb-And-Flow System For Greenhouse Lettuce Production, Joseph Chidiac

Theses and Dissertations

A novel soilless technique for the production of lettuce was developed and evaluated for its viability for ornamental greenhouse growers adapting their ebb-and-flood irrigation benching systems to diversify into growing lettuce, without having to purchase the conventional nutrient film technique (NFT) or deep flow technique (DFT) hydroponic systems. The experimental design was a three by four factorial, with three treatments for aggregate depth (19, 38, and 57 mm) and four treatments for irrigation frequency (once every 1, 2, 4, or 8 hours), for a total of twelve treatment combinations. Each treatment was replicated three times in a randomized complete block ...


The Effect Of Preflood Nitrogen And Flood Establishment Timing On Rice Development, Nitrogen Uptake And Grain Yield, Tyler Richmond 2017 University of Arkansas, Fayetteville

The Effect Of Preflood Nitrogen And Flood Establishment Timing On Rice Development, Nitrogen Uptake And Grain Yield, Tyler Richmond

Theses and Dissertations

Urea-N fertilizer is typically applied at the 5-leaf stage to rice (Oryza sativa L.) grown in a dry-seeded, delayed-flood production system. How long the preflood-N can be delayed without adverse effects on yield potential is poorly understood. The research objective was to determine the effects of preflood-N application and flood establishment timing on aboveground-N content, 50% heading, yield components, and grain yield. Trials were established on silt loam soils at the Pine Tree Research Station (PTRS) and Rice Research and Extension Center (RREC) during 2015 and 2016. Urea-N was applied at 0, 45, 90, 135, and 180 kg N ha-1 ...


Importance Of Scale, Land Cover, And Weather On The Abundance Of Bird Species In A Managed Forest, Alexis R. Grinde, Gerald J. Niemi, Brian R. Sturtevant, Hannah Panci, Wayne Thogmartin, Peter Wolter 2017 University of Minnesota - Duluth

Importance Of Scale, Land Cover, And Weather On The Abundance Of Bird Species In A Managed Forest, Alexis R. Grinde, Gerald J. Niemi, Brian R. Sturtevant, Hannah Panci, Wayne Thogmartin, Peter Wolter

Natural Resource Ecology and Management Publications

Climate change and habitat loss are projected to be the two greatest drivers of biodiversity loss over the coming century. While public lands have the potential to increase regional resilience of bird populations to these threats, long-term data are necessary to document species responses to changes in climate and habitat to better understand population vulnerabilities. We used generalized linear mixed models to determine the importance of stand-level characteristics, multi-scale land cover, and annual weather factors to the abundance of 61 bird species over a 20-year time frame in Chippewa National Forest, Minnesota, USA. Of the 61 species modeled, we were ...


Plasma Fibroblast Growth Factor-21 Levels In Patients With Inborn Errors Of Metabolism, Brian Kirmse, Juan Cabrera-Luque, Omar Ayyub, Kristina Cusmano-Ozog, Kimberly A. Chapman, Marshall L. Summar 2017 George Washington University

Plasma Fibroblast Growth Factor-21 Levels In Patients With Inborn Errors Of Metabolism, Brian Kirmse, Juan Cabrera-Luque, Omar Ayyub, Kristina Cusmano-Ozog, Kimberly A. Chapman, Marshall L. Summar

Pediatrics Faculty Publications

Fibroblast growth factor-21 (FGF21) levels are elevated in patients with primary mitochondrial disorders but have not been studied in patients with inborn errors of metabolism (IEM) known to have secondary mitochondrial dysfunction. We measured plasma FGF21 by ELISA in patients with and without IEM. FGF21 levels were higher in patients with IEM compared to without IEM (370 pg/dL vs. 0–65 pg/dL). Further study of FGF21 as a biomarker in IEM is warranted.


Superresolution Imaging Identifies That Conventional Trafficking Pathways Are Not Essential For Endoplasmic Reticulum To Outer Mitochondrial Membrane Protein Transport., Kyle Salka, Shivaprasad Bhuvanendran, Kassandra Wilson, Petros Bozidis, Mansi Mehta, Kristin Rainey, Hiromi Sesaki, George H Patterson, Jyoti K. Jaiswal, Anamaris M. Colberg-Poley 2017 George Washington University

Superresolution Imaging Identifies That Conventional Trafficking Pathways Are Not Essential For Endoplasmic Reticulum To Outer Mitochondrial Membrane Protein Transport., Kyle Salka, Shivaprasad Bhuvanendran, Kassandra Wilson, Petros Bozidis, Mansi Mehta, Kristin Rainey, Hiromi Sesaki, George H Patterson, Jyoti K. Jaiswal, Anamaris M. Colberg-Poley

Genomics and Precision Medicine Faculty Publications

Most nuclear-encoded mitochondrial proteins traffic from the cytosol to mitochondria. Some of these proteins localize at mitochondria-associated membranes (MAM), where mitochondria are closely apposed with the endoplasmic reticulum (ER). We have previously shown that the human cytomegalovirus signal-anchored protein known as viral mitochondria-localized inhibitor of apoptosis (vMIA) traffics from the ER to mitochondria and clusters at the outer mitochondrial membrane (OMM). Here, we have examined the host pathways by which vMIA traffics from the ER to mitochondria and clusters at the OMM. By disruption of phosphofurin acidic cluster sorting protein 2 (PACS-2), mitofusins (Mfn1/2), and dynamin related protein 1 ...


Vocal Individuality And Species Divergence In The Contact Calls Of Banded Penguins, Livio Favaro, Claudia Gili, Cristiano Da Rugna, Guido Gnone, Chiara Fissore, Daniel Sanchez, Alan G. McElligott, Marco Gamba, Daniela Pessani 2017 University of Turin

Vocal Individuality And Species Divergence In The Contact Calls Of Banded Penguins, Livio Favaro, Claudia Gili, Cristiano Da Rugna, Guido Gnone, Chiara Fissore, Daniel Sanchez, Alan G. Mcelligott, Marco Gamba, Daniela Pessani

Alan G. McElligott, Ph.D.

Penguins produce contact calls to maintain social relationships and group cohesion. Such vocalisations have recently been demonstrated to encode individual identity information in the African penguin. Using a source-filter theory approach, we investigated whether acoustic cues of individuality can also be found in other Spheniscus penguins and the acoustic features of contact calls have diverged within this genus. We recorded vocalisations from two ex-situ colonies of Humboldt penguin and Magellanic penguin (sympatric and potentially interbreeding in the wild) and one ex-situ group of African penguins (allopatric although capable of interbreeding with the other two species in captivity). We measured 14 ...


Goats Display Audience-Dependent Human-Directed Gazing Behaviour In A Problem-Solving Task, Christian Nawroth, Jemma M. Brett, Alan G. McElligott 2017 Queen Mary University of London

Goats Display Audience-Dependent Human-Directed Gazing Behaviour In A Problem-Solving Task, Christian Nawroth, Jemma M. Brett, Alan G. Mcelligott

Alan G. McElligott, Ph.D.

Domestication is an important factor driving changes in animal cognition and behaviour. In particular, the capacity of dogs to communicate in a referential and intentional way with humans is considered a key outcome of how domestication as a companion animal shaped the canid brain. However, the lack of comparison with other domestic animals makes general conclusions about how domestication has affected these important cognitive features difficult. We investigated human-directed behaviour in an ‘unsolvable problem’ task in a domestic, but non-companion species: goats. During the test, goats experienced a forward-facing or an away-facing person. They gazed towards the forward-facing person earlier ...


, Bonnie Becker, Michael Behrens 2017 University of Washington Tacom

, Bonnie Becker, Michael Behrens

Bonnie Becker

Native Olympia oysters have been the subject of widespread restoration efforts across the west coast, including in the Salish Sea. The ultimate goal of restoration is to establish populations that are self-sustaining or even exporting new offspring to other appropriate habitats. It is difficult to study the early life history of marine invertebrates, which have a microscopic and planktonic larval form and often episodic settlement pulses. However, being able to predict larval behaviors and settlement preferences can allow practitioners to design habitats, choose sites, and distribute restoration networks more effectively. The purpose of this study, a collaboration among academic and ...


Productivity And Resistance To Weed Invasion In Four Prairie Biomass Feedstocks With Different Diversity, Jessica E. Abernathy, Dustin R. J. Graham, Mark E. Sherrard, Daryl D. Smith 2017 University of Northern Iowa

Productivity And Resistance To Weed Invasion In Four Prairie Biomass Feedstocks With Different Diversity, Jessica E. Abernathy, Dustin R. J. Graham, Mark E. Sherrard, Daryl D. Smith

Daryl Smith

High-diversity mixtures of native tallgrass prairie vegetation should be effective biomass feedstocks because of their high productivity and low input requirements. These diverse mixtures should also enhance several of the ecosystem services provided by the traditional monoculture feedstocks used for bioenergy. In this study, we compared biomass production, year-to-year variation in biomass production, and resistance to weed invasion in four prairie biomass feedstocks with different diversity: one species – a switchgrass monoculture; five species – a mix of C4 grasses; 16 species – a mix of grasses, forbs, and legumes; and 32 species – a mix of grasses, forbs, legumes, and sedges. Each diversity ...


Iowa Prairie: Original Extent And Loss, Preservation And Recovery Attempts, Daryl D. Smith 2017 University of Northern Iowa

Iowa Prairie: Original Extent And Loss, Preservation And Recovery Attempts, Daryl D. Smith

Daryl Smith

Iowa's prairie has to be assessed in the context of the pre- and post-agriculturally dominated ecosystem in which it now exists. This requires an understanding of prairies and of society's perspective of prairies. Therefore, the attitudes of people through time have to be considered; (1) those who were involved in the demise of the prairie, (2) those who helped saved the pieces of the prairie and (3) those who may be called upon to recover the prairie ecosystem.


Living Mulch For Sustainable Maize Stover Biomass Harvest, Cynthia A. Bartel, Chumki Banik, Andrew W. Lenssen, Kenneth J. Moore, David A. Laird, Sotirios V. Archontoulis, Kendall R. Lamkey 2017 Iowa State University

Living Mulch For Sustainable Maize Stover Biomass Harvest, Cynthia A. Bartel, Chumki Banik, Andrew W. Lenssen, Kenneth J. Moore, David A. Laird, Sotirios V. Archontoulis, Kendall R. Lamkey

Kendall R Lamkey

The Renewable Fuels Standard mandate provides enhanced opportunity for maize (Zea mays L.) stover use as a bioenergy feedstock. Living mulch (LM) offers a possible solution for the natural resources constraints associated with maize stover biomass harvest. A two site-year study was conducted near Boone and Kanawha, IA, in both maize following maize (MM) and maize following soybean [Glycine max (L.) Merr.] (SM) sequences to evaluate the impact of established and chemically suppressed Kentucky bluegrass (Poa pratensis L.) (KB) ‘Ridgeline’, ‘Wild Horse’, ‘Oasis’, and ‘Mallard’ blend and creeping red fescue (Festuca rubra L.) (CF) ‘Boreal’ as LM on three maize ...


Book Review Of Serendipity: An Ecologist’S Quest To Understand Nature, E. E. Ball, D. M. Adams, J. N. Dupuie Jr., M. M. Jones, P. G. McGovern, R. M. Ruden, S. R. Schmidt, G. J. Vaziri, J. S. Eeling, B. D. Kirk, A. L. McCombs, A. B. Rabinowitz, K. M. Thompson, Z. J. Hudson, Robert W. Klaver 2017 Iowa State University

Book Review Of Serendipity: An Ecologist’S Quest To Understand Nature, E. E. Ball, D. M. Adams, J. N. Dupuie Jr., M. M. Jones, P. G. Mcgovern, R. M. Ruden, S. R. Schmidt, G. J. Vaziri, J. S. Eeling, B. D. Kirk, A. L. Mccombs, A. B. Rabinowitz, K. M. Thompson, Z. J. Hudson, Robert W. Klaver

Robert Klaver

A common thought among graduate students is: “how do established scientists get where they are today?” In Serendipity: An Ecologist’s Quest to Understand Nature, James Estes offers a personal reflection on research experiences spanning his 50-year career, beginning as a Ph.D. student in 1970 and concluding with recognition as a member of the National Academy of Sciences in 2014. Estes chronologically outlines the foundational trophic cascade ecology research that he and colleagues conducted in the Aleutian Islands, examining key relationships among kelp forests, sea otters, sea urchins, and killer whales through anecdotal stories of achievement and challenge. Estes ...


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