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The Manuscript Works Of S. Fred Prince (1857-1951), Sarah Burke Cahalan, Jason W. Dean 2018 University of Dayton

The Manuscript Works Of S. Fred Prince (1857-1951), Sarah Burke Cahalan, Jason W. Dean

Marian Library/IMRI Faculty Publications

S. Fred Prince, a botanical illustrator and amateur scientist, is a largely unknown artist whose work on the American landscape demonstrates his eligibility to be considered in the lineage of self-taught illustrator-naturalists such as Mark Catesby and Genevieve Jones. In this article, we present a survey of extant Prince materials identified at time of writing, describing their contents and physical characteristics. Beyond this survey and description, we also provide a biographical sketch and timeline of Prince's life.


Mac3a And Mac3b, Two Core Subunits Of The Mos4-Associated Complex, Positively Influence Mirna Biogenesis, Shengjun Li, Kan Liu, Bangjun Zhou, Mu Li, Shuxin Zhang, Lirong Zeng, Chi Zhang, Bin Yu 2018 University of Nebraska-Lincoln

Mac3a And Mac3b, Two Core Subunits Of The Mos4-Associated Complex, Positively Influence Mirna Biogenesis, Shengjun Li, Kan Liu, Bangjun Zhou, Mu Li, Shuxin Zhang, Lirong Zeng, Chi Zhang, Bin Yu

Faculty Publications from the Center for Plant Science Innovation

MAC3A and MAC3B are conserved U-box containing proteins in eukaryotes. They are subunits of the MOS4-associated complex (MAC) that plays essential roles in plant immunity and development in Arabidopsis. However, their functional mechanisms remain elusive. Here we show that Arabidopsis thaliana MAC3A and MAC3B act redundantly in microRNA (miRNA) biogenesis. Lack of both MAC3A and MAC3B in the mac3b mac3b double mutant reduces the accumulation of miRNAs, causing elevated transcript levels of miRNA targets. mac3a mac3b also decreases the levels of primary miRNA transcripts (pri-miRNAs). However, MAC3A and MAC3B do not affect the promoter activity of genes encoding miRNAs (MIR ...


Overlapping Residual Herbicides For Control Of Photosystem (Ps) Ii- And 4-Hydroxyphenylpyruvate Dioxygenase (Hppd)-Inhibitor-Resistant Palmer Amaranth (Amaranthus Palmeri S. Watson) In Glyphosate-Resistant Maize, Parminder S. Chahal, Zahoor Ahmad Ganie, Amit J. Jhala 2018 University of Nebraska-Lincoln

Overlapping Residual Herbicides For Control Of Photosystem (Ps) Ii- And 4-Hydroxyphenylpyruvate Dioxygenase (Hppd)-Inhibitor-Resistant Palmer Amaranth (Amaranthus Palmeri S. Watson) In Glyphosate-Resistant Maize, Parminder S. Chahal, Zahoor Ahmad Ganie, Amit J. Jhala

Agronomy & Horticulture -- Faculty Publications

A Palmer amaranth (Amaranthus palmeri S. Watson) biotype has evolved resistance to photosystem (PS) II- (atrazine) and 4-hydroxyphenylpyruvate dioxygenase (HPPD)-inhibiting herbicides (mesotrione, tembotrione, and topramezone) in maize seed production field in Nebraska, USA. The objectives of this study were to determine the effect of soil residual pre-emergence (PRE) herbicides followed by (fb) tank-mixture of residual and foliar active post-emergence (POST) herbicides on PS-II- and HPPD-inhibitor-resistant Palmer amaranth control, maize yield, and net economic returns. Field experiments were conducted in a grower’s field infested with PS II- and HPPD-inhibitor-resistant Palmer amaranth near Shickley in Fillmore County, Nebraska, USA in ...


Identifying New Sources Of Resistance To Brown Stem Rot In Soybean, Chantal E. McCabe, Asheesh K. Singh, Leonor F. Leandro, Silvia R. Cianzio, Michelle A. Graham 2018 Iowa State University

Identifying New Sources Of Resistance To Brown Stem Rot In Soybean, Chantal E. Mccabe, Asheesh K. Singh, Leonor F. Leandro, Silvia R. Cianzio, Michelle A. Graham

Asheesh Singh

Brown stem rot (BSR), caused by the fungus Phialophora gregata f. sp. sojae (Allington & D.W. Chamberlain) W. Gams (syn. Cadophora gregata), causes yield losses up to 38%. Three dominant BSR-resistant genes have been identified: Rbs1, Rbs2, and Rbs3. Additional BSR resistance loci will complement breeding efforts by expanding the soybean [Glycine max (L.) Merr.] genetic base. The objective of this research was to determine if PI 594637, PI 594638B, PI 594650A, and PI 594858B contained novel BSR resistance genes. The accessions were crossed to three genotypes with known BSR resistance genes and populations were developed for allelism studies. A ...


Advancing Our Understanding Of Charcoal Rot In Soybeans, Martha P. Romero Luna, Daren Mueller, Alemu Mengistu, Asheesh K. Singh, Glen L. Hartman, Kiersten A. Wise 2018 Purdue University

Advancing Our Understanding Of Charcoal Rot In Soybeans, Martha P. Romero Luna, Daren Mueller, Alemu Mengistu, Asheesh K. Singh, Glen L. Hartman, Kiersten A. Wise

Asheesh Singh

Charcoal rot [Macrophomina phaseolina (Tassi) Goid] of soybean [Glycine max (L.) Merr.] is an important but commonly misidentified disease, and very few summary articles exist on this pathosystem. Research conducted over the past 10 yr has improved our understanding of the environment conducive to disease development, host resistance, and improved disease diagnosis and management. This article summarizes the currently available research with an emphasis on disease management.


Delayed Senescence In Soybean: Terminology, Research Update, And Survey Results From Growers, C. J. Harbach, T. W. Allen, C. R. Bowen, J. A. Davis, C. B. Hill, M. Leitman, B. R. Leonard, D. S. Mueller, G. B. Padgett, X. A. Phillips, R. W. Schneider, E. J. Sikora, A. K. Singh, G. L. Hartman 2018 University of Illinois at Urbana-Champaign

Delayed Senescence In Soybean: Terminology, Research Update, And Survey Results From Growers, C. J. Harbach, T. W. Allen, C. R. Bowen, J. A. Davis, C. B. Hill, M. Leitman, B. R. Leonard, D. S. Mueller, G. B. Padgett, X. A. Phillips, R. W. Schneider, E. J. Sikora, A. K. Singh, G. L. Hartman

Asheesh Singh

The terms used to describe symptoms of delayed senescence in soybean often are used inconsistently or interchangeably and do not adequately distinguish the observed symptoms in the field. Various causes have been proposed to explain the development of delayed senescence symptoms. In this article, we review published reports on delayed senescence symptoms in soybean, summarize current research findings, provide examples of terms related to specific symptoms, and present an overview of the results of a multi-state survey directed to soybean growers to understand their concerns about delayed soybean senescence. Some of these terms, such as green bean syndrome and green ...


Main And Epistatic Loci Studies In Soybean For Sclerotinia Sclerotiorum Resistance Reveal Multiple Modes Of Resistance In Multi-Environments, Tara C. Moellers, Arti Singh, Jiaoping Zhang, Jae Brungardt, Mehdi Kabbage, Daren S. Mueller, Craig R. Grau, Ashish Ranjan, Damon L. Smith, R. V. Chowdy-Reddy, Asheesh K. Singh 2018 Iowa State University

Main And Epistatic Loci Studies In Soybean For Sclerotinia Sclerotiorum Resistance Reveal Multiple Modes Of Resistance In Multi-Environments, Tara C. Moellers, Arti Singh, Jiaoping Zhang, Jae Brungardt, Mehdi Kabbage, Daren S. Mueller, Craig R. Grau, Ashish Ranjan, Damon L. Smith, R. V. Chowdy-Reddy, Asheesh K. Singh

Asheesh Singh

Genome-wide association (GWAS) and epistatic (GWES) studies along with expression studies in soybean [Glycine max (L.) Merr.] were leveraged to dissect the genetics of Sclerotinia stem rot (SSR) [caused by Sclerotinia sclerotiorum (Lib.) de Bary], a significant fungal disease causing yield and quality losses. A large association panel of 466 diverse plant introduction accessions were phenotyped in multiple field and controlled environments to: (1) discover sources of resistance, (2) identify SNPs associated with resistance, and (3) determine putative candidate genes to elucidate the mode of resistance. We report 58 significant main effect loci and 24 significant epistatic interactions associated with ...


Genetic Architecture Of Charcoal Rot (Macrophomina Phaseolina) Resistance In Soybean Revealed Using A Diverse Panel, Sara M. Coser, R. V. Chowda Reddy, Jiaoping Zhang, Daren S. Mueller, Alemu Mengistu, Kiersten A. Wise, Tom W. Allen, Arti Singh, Asheesh K. Singh 2018 Iowa State University

Genetic Architecture Of Charcoal Rot (Macrophomina Phaseolina) Resistance In Soybean Revealed Using A Diverse Panel, Sara M. Coser, R. V. Chowda Reddy, Jiaoping Zhang, Daren S. Mueller, Alemu Mengistu, Kiersten A. Wise, Tom W. Allen, Arti Singh, Asheesh K. Singh

Asheesh Singh

Charcoal rot (CR) disease caused by Macrophomina phaseolina is responsible for significant yield losses in soybean production. Among the methods available for controlling this disease, breeding for resistance is the most promising. Progress in breeding efforts has been slow due to the insufficient information available on the genetic mechanisms related to resistance. Genome-wide association studies (GWAS) enable unraveling the genetic architecture of resistance and identification of causal genes. The aims of this study were to identify new sources of resistance to CR in a collection of 459 diverse plant introductions from the USDA Soybean Germplasm Core Collection using field and ...


1999 Lilley Cornett Woods Overstory Data, Ryan W. McEwan, Julia I. Chapman, Robert N. Muller 2018 University of Dayton

1999 Lilley Cornett Woods Overstory Data, Ryan W. Mcewan, Julia I. Chapman, Robert N. Muller

Ryan McEwan

Data collected in 1999 on the overstory in the Big Everidge Hollow portion of the Lilley Cornett Woods Appalachian Ecological Research Station in southeastern Kentucky. Data key is provided in a supplemental file.

Accompanying photo by Ryan W. McEwan.

DOI: https://doi.org/10.26890/lcw.5pn95oc6d7


Virus-Induced Gene Silencing And Transient Gene Expression In Soybean (Glycine Max) Using Bean Pod Mottle Virus Infectious Clones, Steven A. Whitham, Lori M. Lincoln, R. V. Chowda-Reddy, Jaime D. Dittman, Jamie A. O'Rourke, Michelle A. Graham 2018 Iowa State University

Virus-Induced Gene Silencing And Transient Gene Expression In Soybean (Glycine Max) Using Bean Pod Mottle Virus Infectious Clones, Steven A. Whitham, Lori M. Lincoln, R. V. Chowda-Reddy, Jaime D. Dittman, Jamie A. O'Rourke, Michelle A. Graham

Steven Whitham

Virus-induced gene silencing (VIGS) is a powerful and rapid approach for determining the functions of plant genes. The basis of VIGS is that a viral genome is engineered so that it can carry fragments of plant genes, typically in the 200 to 300 base pair size range. The recombinant viruses are used to infect experimental plants, and wherever the virus invades, the target gene or genes will be silenced. VIGS is thus transient, and in the span of a few weeks, it is possible to design VIGS constructs and then generate loss-of-function phenotypes through RNA silencing of the target genes ...


The Role Of Environmental Filtering In Structuring Appalachian Tree Communities: Topographic Influences On Functional Diversity Are Mediated Through Soil Characteristics, Julia I. Chapman, Ryan W. McEwan 2018 University of Dayton

The Role Of Environmental Filtering In Structuring Appalachian Tree Communities: Topographic Influences On Functional Diversity Are Mediated Through Soil Characteristics, Julia I. Chapman, Ryan W. Mcewan

Biology Faculty Publications

Identifying the drivers of community assembly has long been a central goal in ecology, and the development of functional diversity indices has provided a new way of detecting the influence of environmental gradients on biotic communities. For an old-growth Appalachian forest, we used path analysis to understand how patterns of tree functional diversity relate to topography and soil gradients and to determine whether topographic effects are mediated through soil chemistry. All of our path models supported the idea of environmental filtering: stressful areas (high elevation, low soil moisture, low soil nutrients) were occupied by communities of low functional diversity, which ...


Provitamin A Biofortification Of Cassava Enhances Shelf Life But Reduces Dry Matter Content Of Storage Roots Due To Altered Carbon Partitioning Into Starch, Getu Beyene, Felix R. Solomon, Raj D. Chauhan, Eliana Gaitán-Solis, Narayanan Narayanan, Jackson Gehan, Dimuth Siritunga, Robin L. Stevens, John Jifon, Joyce Van Eck, Edward Linsler, Malia Gehan, Muhammad Ilyas, Martin Fregene, Richard T. Sayre, Paul Anderson, Nigel Taylor, Edgar B. Cahoon 2017 Donald Danforth Plant Science Center, St. Louis, MO

Provitamin A Biofortification Of Cassava Enhances Shelf Life But Reduces Dry Matter Content Of Storage Roots Due To Altered Carbon Partitioning Into Starch, Getu Beyene, Felix R. Solomon, Raj D. Chauhan, Eliana Gaitán-Solis, Narayanan Narayanan, Jackson Gehan, Dimuth Siritunga, Robin L. Stevens, John Jifon, Joyce Van Eck, Edward Linsler, Malia Gehan, Muhammad Ilyas, Martin Fregene, Richard T. Sayre, Paul Anderson, Nigel Taylor, Edgar B. Cahoon

Faculty Publications from the Center for Plant Science Innovation

Storage roots of cassava (Manihot esculenta Crantz), a major subsistence crop of sub-Saharan Africa, are calorie rich but deficient in essential micronutrients, including provitamin A β-carotene. In this study, β-carotene concentrations in cassava storage roots were enhanced by coexpression of transgenes for deoxy-d-xylulose-5-phosphate synthase (DXS) and bacterial phytoene synthase (crtB), mediated by the patatin-type 1 promoter. Storage roots harvested from field-grown plants accumulated carotenoids to ≤50 lg/g DW, 15- to 20-fold increases relative to roots from nontransgenic plants. Approximately 85%–90% of these carotenoids accumulated as all-trans-β-carotene, the most nutritionally efficacious carotenoid. β-Carotene-accumulating storage roots displayed delayed onset of ...


Monitoring Soft-Mast Production In Pine Woodland Restoration Areas On The Ouachita National Forest, Tamara B. Wood 2017 Stephen F Austin State University

Monitoring Soft-Mast Production In Pine Woodland Restoration Areas On The Ouachita National Forest, Tamara B. Wood

Electronic Theses and Dissertations

The use of prescribed fire is integral to the restoration of open woodland habitats in the southeast, including shortleaf pine (Pinus echinata) woodlands in the Ouachita Mountains. Mature pine habitats maintained with recurrent disturbances have an open understory with a rich floristic diversity that provides quality habitat for many wildlife species, including the endemic and endangered red-cockaded woodpecker (Picoides borealis). Fire has many potential benefits for wildlife; however, the effects of fire on several important woody soft-mast producing species are not fully understood. Soft-mast quantity and quality is a key component in determining year-round habitat quality for several wildlife species ...


A High-Throughput, Field-Based Phenotyping Technology For Tall Biomass Crops, Maria G. Salas Fernandez, Yin Bao, Lie Tang, Patrick Schnable 2017 Iowa State University

A High-Throughput, Field-Based Phenotyping Technology For Tall Biomass Crops, Maria G. Salas Fernandez, Yin Bao, Lie Tang, Patrick Schnable

Agricultural and Biosystems Engineering Publications

Recent advances in "omics" technologies have not been accompanied by equally efficient, cost-effective and accurate phenotyping methods required to dissect the genetic architecture of complex traits. Even though high-throughput phenotyping platforms have been developed for controlled environments, field-based aerial and ground technologies have only been designed and deployed for short stature crops. Therefore, we developed and tested Phenobot 1.0, an auto-steered and self-propelled field-based high-throughput phenotyping platform for tall dense canopy crops, such as sorghum (Sorghum bicolor L. Moench). Phenobot 1.0 was equipped with laterally positioned and vertically stacked stereo RGB cameras. Images collected from 307 diverse sorghum ...


The Effect Of Preflood Nitrogen And Flood Establishment Timing On Rice Development, Nitrogen Uptake And Grain Yield, Tyler Richmond 2017 University of Arkansas, Fayetteville

The Effect Of Preflood Nitrogen And Flood Establishment Timing On Rice Development, Nitrogen Uptake And Grain Yield, Tyler Richmond

Theses and Dissertations

Urea-N fertilizer is typically applied at the 5-leaf stage to rice (Oryza sativa L.) grown in a dry-seeded, delayed-flood production system. How long the preflood-N can be delayed without adverse effects on yield potential is poorly understood. The research objective was to determine the effects of preflood-N application and flood establishment timing on aboveground-N content, 50% heading, yield components, and grain yield. Trials were established on silt loam soils at the Pine Tree Research Station (PTRS) and Rice Research and Extension Center (RREC) during 2015 and 2016. Urea-N was applied at 0, 45, 90, 135, and 180 kg N ha-1 ...


Phyllotactic Regularity Requires The Paf1 Complex In Arabidopsis, Kateryna Fal, Mengying Liu, Assem Duisembekova, Yassin Refahi, Elizabeth S. Haswell, Olivier Hamant 2017 Washington University in St Louis

Phyllotactic Regularity Requires The Paf1 Complex In Arabidopsis, Kateryna Fal, Mengying Liu, Assem Duisembekova, Yassin Refahi, Elizabeth S. Haswell, Olivier Hamant

Biology Faculty Publications & Presentations

In plants, aerial organs are initiated at stereotyped intervals, both spatially (every 137° in a pattern called phyllotaxis) and temporally (at prescribed time intervals called plastochrons). To investigate the molecular basis of such regularity, mutants with altered architecture have been isolated. However, most of them only exhibit plastochron defects and/or produce a new, albeit equally reproducible, phyllotactic pattern. This leaves open the question of a molecular control of phyllotaxis regularity. Here, we show that phyllotaxis regularity depends on the function of VIP proteins, components of the RNA polymerase II-associated factor 1 complex (Paf1c). Divergence angles between successive organs along ...


Evaluating The Impact Of Two Contrasting Tillage Practices On Soil Properties In Central Kentucky, Emily Cook 2017 Murray State University

Evaluating The Impact Of Two Contrasting Tillage Practices On Soil Properties In Central Kentucky, Emily Cook

Posters-at-the-Capitol

Farming practices such as no tillage and plowing can institute change on soil physical and chemical characteristics. In this research, the effects of long-term conventional and no-tillage systems on the selected soil properties were determined in a continuous corn system on a farm with Maury silt loam soil. These samples were taken from University of Kentucky's Research Farm (Spindletop Farm). The field used was tilled in 1969 from bluegrass sod and the first time research was conduced was in 1970. Each plot is 20 ft. by 40 ft. and for many years each plot was split with winter cover ...


Spatial Mapping And Profiling Of Metabolite Distributions During Germination, Robbyn Anand, Adam D. Feenstra, Liza E. Alexander, Zhihong Song, Andrew R. Korte, Marna Yandeaue-Nelson, Basil J. Nikolau, Young-Jin Lee 2017 Iowa State University

Spatial Mapping And Profiling Of Metabolite Distributions During Germination, Robbyn Anand, Adam D. Feenstra, Liza E. Alexander, Zhihong Song, Andrew R. Korte, Marna Yandeaue-Nelson, Basil J. Nikolau, Young-Jin Lee

Chemistry Publications

Germination is a highly complex process by which seeds begin to develop and establish themselves as viable organisms. In this paper, we utilize a combination of GC-MS, LC-fluorescence, and mass spectrometry imaging (MSI) approaches to profile and visualize the metabolic distributions of germinating seeds from two different inbreds of maize seeds, B73 and Mo17. GC and LC analyses demonstrate that the two inbreds are highly differentiated in their metabolite profiles throughout the course of germination, especially with regard to amino acids, sugar alcohols, and small organic acids. Crude dissection of the seed followed by GC-MS analysis of polar metabolites also ...


A Pectin Methylesterase Zmpme3 Is Expressed In Gametophyte Factor1-S (Ga1-S) Silks And Maps To That Locus In Maize (Zea Mays L.), Adrienne N. Moran Lauter, Michael G. Muszynski, Ryan D. Huffman, M. Paul Scott 2017 U.S. Department of Agriculture

A Pectin Methylesterase Zmpme3 Is Expressed In Gametophyte Factor1-S (Ga1-S) Silks And Maps To That Locus In Maize (Zea Mays L.), Adrienne N. Moran Lauter, Michael G. Muszynski, Ryan D. Huffman, M. Paul Scott

Agronomy Publications

The ga1 locus of maize confers unilateral cross incompatibility, preventing cross pollination between females carrying the incompatible Ga1-s allele and males not carrying a corresponding compatible allele. To characterize this system at the molecular level, we carried out a transcript profiling experiment in which silks from near isogenic lines carrying the Ga1-sand ga1 alleles were compared. While several differentially expressed genes were identified, only one mapped to the known location of ga1. This gene is a pectin methylesterase (PME), which we designated as ZmPme3, and is present and expressed only in Ga1-s genotypes. While a functional ZmPME3 is ...


Phylogenetic Patterns Of Foliar Mineral Nutrient Accumulation Among Gypsophiles And Their Relatives In The Chihuahuan Desert, Rebecca E. Drenovsky, Clare Muller, Michael J. Moore, Zoe Feder, Helene Tiley 2017 John Carroll University

Phylogenetic Patterns Of Foliar Mineral Nutrient Accumulation Among Gypsophiles And Their Relatives In The Chihuahuan Desert, Rebecca E. Drenovsky, Clare Muller, Michael J. Moore, Zoe Feder, Helene Tiley

Rebecca E. Drenovsky

PREMISE OF THE STUDY: Gypsum endemism in plants (gypsophily) is common on gypsum outcrops worldwide, but little is known about the functional ecology of Chihuahuan Desert gypsophiles. We investigated whether leaf chemistry of gypsophile lineages from the northern Chihuahuan Desert are similar to leaves of related nonendemic (gypsovag) species relative to their soil chemistry. We expected widely distributed gypsophiles (hypothesized to be older lineages on gypsum) would have distinct leaf chemistry from narrowly distributed, relatively younger lineages endemic to gypsum and gypsovags, refl ecting adaptation to gypsum. METHODS: We collected leaves from 23 gypsophiles and related nonendemic taxa growing on ...


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