Polygenic Risk Score Development And Validation For Early Detection And Risk Stratification Of Rheumatoid Arthritis And Osteoarthritis In Postmenopausal Women,
2023
University of Nevada, Las Vegas
Polygenic Risk Score Development And Validation For Early Detection And Risk Stratification Of Rheumatoid Arthritis And Osteoarthritis In Postmenopausal Women, Yingke Xu
UNLV Theses, Dissertations, Professional Papers, and Capstones
Introduction: Around one in four adults worldwide suffer from arthritis. There are more than one hundred different forms of arthritis; the two most common forms of arthritis are rheumatoid arthritis (RA) and osteoarthritis (OA). RA is an autoimmune disease that can cause joint inflammation. Around 1.3 million adults in the US suffer from RA, representing 0.6%–1% of the population. The RA diagnosis in its early stages is difficult since its signs and symptoms are similar to other arthritis. OA is the most common form of arthritis. In the US, around 30.8 million people are affected by this disease. However, OA …
Development Of A Metapgs For Accurate Prediction Of Osteoporotic Fracture,
2023
University of Nevada, Las Vegas
Development Of A Metapgs For Accurate Prediction Of Osteoporotic Fracture, Xiangxue Xiao
UNLV Theses, Dissertations, Professional Papers, and Capstones
Introduction: Early identification of individuals at high-risk for osteoporotic fractures who may benefit from preventive intervention is essential. However, the predictive accuracy of the currently used fracture risk assessment tool remains suboptimal. The first aim of this research is to construct genome-wide polygenic scores for the femoral neck (PGS_FNBMDidpred) and total body BMD (PGS_TBBMDidpred) and to estimate their potential in identifying individuals with a high risk of osteoporotic fractures. The second aim is to validate the predictive performance of two previously established PGSs (PGS_FNBMDidpred and PGS_TBBMDidpred) in an external cohort …
A Framework For Statistical Modeling Of Wind Speed And Wind Direction,
2023
Clemson University
A Framework For Statistical Modeling Of Wind Speed And Wind Direction, Eva Murphy
All Dissertations
Atmospheric near surface wind speed and wind direction play an important role in many applications, ranging from air quality modeling, building design, wind turbine placement to climate change research. It is therefore crucial to accurately estimate the joint probability distribution of wind speed and direction. This dissertation aims to provide a modeling framework for studying the variation of wind speed and wind direction. To this end, three projects are conducted to address some of the key issues for modeling wind vectors.\\
First, a conditional decomposition approach is developed to model the joint distribution of wind speed and direction. Specifically, the …
Cannabidiol Tweet Miner: A Framework For Identifying Misinformation In Cbd Tweets.,
2023
University of Louisville
Cannabidiol Tweet Miner: A Framework For Identifying Misinformation In Cbd Tweets., Jason Turner
Electronic Theses and Dissertations
As regulations surrounding cannabis continue to develop, the demand for cannabis-based products is on the rise. Despite not producing the psychoactive effects commonly associated with THC, products containing cannabidiol (CBD) have gained immense popularity in recent years as a potential treatment option for a range of conditions, particularly those associated with pain or sleep disorders. However, due to current federal policies, these products have yet to undergo comprehensive safety and efficacy testing. Fortunately, utilizing advanced natural language processing (NLP) techniques, data harvested from social networks have been employed to investigate various social trends within healthcare, such as disease tracking and …
Copula Based Models For Bivariate Zero-Inflated Count Time Series Data,
2023
Old Dominion University
Copula Based Models For Bivariate Zero-Inflated Count Time Series Data, Dimuthu Fernando
Mathematics & Statistics Theses & Dissertations
Count time series data have multiple applications. The applications can be found in areas of finance, climate, public health and crime data analyses. In most scenarios, time is an important part of the data. Time series counts then come as multivariate vectors that exhibit not only serial dependence within each time series but also with cross-correlation among the series. When considering these observed counts, and when a value, say zero, occurs more often than usual, analysis presents crucial challenges. There is presence of zeroinflation in the data. The literature on bivariate or multivariate count time series, as well as zero-inflated …
Weighted Mean Difference Statistics For Paired Data In The Presence Of Missing Values,
2023
University of Kentucky
Weighted Mean Difference Statistics For Paired Data In The Presence Of Missing Values, Yuntong Li, Brent J. Shelton, William St Clair, Heidi L. Weiss, John L. Villano, Arnold Stromberg, Chi Wang, Li Chen
Markey Cancer Center Faculty Publications
Missing data is a common issue in many biomedical studies. Under a paired design, some subjects may have missing values in either one or both of the conditions due to loss of follow-up, insufficient biological samples, etc. Such partially paired data complicate statistical comparison of the distribution of the variable of interest between the two conditions. In this article, we propose a general class of test statistics based on the difference in weighted sample means without imposing any distributional or model assumption. An optimal weight is derived from this class of tests. Simulation studies show that our proposed test with …
Statistical Modeling Approaches For The Inference Of Cancer Mechanisms,
2023
The University of Texas MD Anderson Cancer Center UTHealth Graduate School of Biomedical Sciences
Statistical Modeling Approaches For The Inference Of Cancer Mechanisms, Licai Huang
Dissertations and Theses (Open Access)
The aim of this study was to explore the potential of integrating multi-platform genomic datasets to improve our understanding of the biological mechanisms behind cancer. By merging clinical outcomes with the data obtained from multi-platform genomic studies, we can gain insight into the biological mechanisms behind a patient’s response to treatment. Additionally, the evaluation of the correlations between genetic variations and gene expression provides a better understanding of the functional significance of these variations. Such knowledge has the potential to revolutionize cancer diagnosis and treatment. This thesis describes methods developed to address two related aims. Aim 1: We have developed …
Statistical Approaches To Estimate Bidirectional And Time-Varying Causal Effects Using Mendelian Randomization,
2023
The University of Texas MD Anderson Cancer Center UTHealth Houston Graduate School of Biomedical Sciences
Statistical Approaches To Estimate Bidirectional And Time-Varying Causal Effects Using Mendelian Randomization, Jinhao Zou
Dissertations and Theses (Open Access)
Mendelian Randomization (MR) is an epidemiological framework using genetic variants as instrumental variables (IVs) to examine the causal effect of an exposure on an outcome. It is widely used to detect causal factors of diseases and provide insight into the biological pathway of diseases. Current methods under the MR framework are built to estimate the unidirectional causal effects of exposures on outcomes and neglect the potential bidirectional causal effects. However, a bidirectional causal effect creates a feedback loop that biases the casual inference in MR studies. Furthermore, current MR methods estimate the causal effect as a single value using cross-sectional …
Single-Index Multinomial Model For Analyzing Crime Data,
2023
University of Texas at El Paso
Single-Index Multinomial Model For Analyzing Crime Data, Kwabena Gyamfi Duodu
Open Access Theses & Dissertations
We develop a flexible single-index multinomial model for analyzing crime data. In additionto the number of crimes reported, the data also includes covariates such as location, time of day, weather, and other demographic factors. We provide an estimation algorithm and develop R code for the single-index multinomial model. Using simulations, we evaluate the performance of the proposed estimation algorithm. When applied to crime data, the single-index multinomial model provides important insights into crime trends and risk variables, assisting in the development of tailored crime prevention programs. Policymakers and law enforcement organizations can use the model's projections to more efficiently allocate …
Comparative Study Of Supervised Classification Techniques With A Modified Knn Algorithm,
2023
University of Texas at El Paso
Comparative Study Of Supervised Classification Techniques With A Modified Knn Algorithm, Noah Owusu
Open Access Theses & Dissertations
The goal of classification is to develop a model that can be used to accurately assign new observations to labeled classes based on the patterns learned from the training data. K-nearest Neighbors algorithm (KNN) is a popular and widely used algorithm for classification, however, its performance can be adversely affected by the presence of outliers in a dataset. In this study we have modified this existing KNN algorithm that can alleviate the effect of outliers in a dataset, thereby improving the performance of the KNN algorithm. We compared the performances of the Modified KNN method and the Existing KNN algorithm …
A Data-Driven Multi-Regime Approach For Predicting Real-Time Energy Consumption Of Industrial Machines.,
2023
University of Louisville
A Data-Driven Multi-Regime Approach For Predicting Real-Time Energy Consumption Of Industrial Machines., Abdulgani Kahraman
Electronic Theses and Dissertations
This thesis focuses on methods for improving energy consumption prediction performance in complex industrial machines. Working with real-world industrial machines brings several challenges, including data access, algorithmic bias, data privacy, and the interpretation of machine learning algorithms. To effectively manage energy consumption in the industrial sector, it is essential to develop a framework that enhances prediction performance, reduces energy costs, and mitigates air pollution in heavy industrial machine operations. This study aims to assist managers in making informed decisions and driving the transition towards green manufacturing. The energy consumption of industrial machinery is substantial, and the recent increase in CO2 …
Penalized Bayesian Exponential Random Graph Models.,
2023
University of Louisville
Penalized Bayesian Exponential Random Graph Models., Vicki Modisette
Electronic Theses and Dissertations
Networks have the critical ability to represent the complex interconnectedness of social relationships, biological processes, and the spread of diseases and information. Exponential random graph models (ERGM) are one of the popular statistical methods for analyzing network data. ERGM, however, struggle with computational challenges and degeneracy issues, further exacerbated by their inability to handle high-dimensional network data. Bayesian techniques provide a promising avenue to overcome these two problems. This paper considers penalized Bayesian exponential random graph models with adaptive lasso and adaptive ridge penalties to perform variable selection and reduce multicollinearity on a variety of networks. The experimental results demonstrate …
Comparing Predictive Performance Of Garch And Stochastic Volatility Models,
2023
University of Arkansas, Fayetteville
Comparing Predictive Performance Of Garch And Stochastic Volatility Models, Swapnaneel Nath
Graduate Theses and Dissertations
This paper compares the predictive performance of two commonly used financial models, the Generalized Auto-Regressive Conditional Heteroskedasticity (GARCH) model, and the Stochastic Volatility model. Both techniques are used in the finance literature to model returns on an asset; the main difference between the two is that the former holds volatility as deterministic, whereas the latter treats it as a stochastic component. Three 10-year periods (2006-15, 2008-17, and 2010-19) of returns of the S&P-500 Index are used to train the two models. The parameter estimation is done using Hamiltonian Monte Carlo. Then, using Sequential Monte Carlo updates, returns for 2016, 2018, …
Stressor: An R Package For Benchmarking Machine Learning Models,
2023
Utah State University
Stressor: An R Package For Benchmarking Machine Learning Models, Samuel A. Haycock
All Graduate Theses and Dissertations, Spring 1920 to Summer 2023
Many discipline specific researchers need a way to quickly compare the accuracy of their predictive models to other alternatives. However, many of these researchers are not experienced with multiple programming languages. Python has recently been the leader in machine learning functionality, which includes the PyCaret library that allows users to develop high-performing machine learning models with only a few lines of code. The goal of the stressor package is to help users of the R programming language access the advantages of PyCaret without having to learn Python. This allows the user to leverage R’s powerful data analysis workflows, while simultaneously …
An Interval-Valued Random Forests,
2023
Utah State University
An Interval-Valued Random Forests, Paul Gaona Partida
All Graduate Theses and Dissertations, Spring 1920 to Summer 2023
There is a growing demand for the development of new statistical models and the refinement of established methods to accommodate different data structures. This need arises from the recognition that traditional statistics often assume the value of each observation to be precise, which may not hold true in many real-world scenarios. Factors such as the collection process and technological advancements can introduce imprecision and uncertainty into the data.
For example, consider data collected over a long period of time, where newer measurement tools may offer greater accuracy and provide more information than previous methods. In such cases, it becomes crucial …
Probabilistic Modeling Of Social Media Networks, Distinguishing Phylogenetic Networks From Trees, And Fairness In Service Queues,
2023
University of New Mexico
Probabilistic Modeling Of Social Media Networks, Distinguishing Phylogenetic Networks From Trees, And Fairness In Service Queues, Md Rashidul Hasan
Mathematics & Statistics ETDs
In this dissertation, three primary issues are explored. The first subject exposes who-saw-from-whom pathways in post-specific dissemination networks in social media platforms. We describe a network-based approach for temporal, textual, and post-diffusion network inference. The conditional point process method discovers the most probable diffusion network. The tool is capable of meaningful analysis of hundreds of post shares. Inferred diffusion networks demonstrate disparities in information distribution between user groups (confirmed versus unverified, conservative versus liberal) and local communities (political, entrepreneurial, etc.). A promising approach for quantifying post-impact, we observe discrepancies in inferred networks that indicate the disproportionate amount of automated bots. …
Robust Penalized Density Power Divergence Regression With Scad Penalty For High Dimensional Data Analysis,
2023
University of Texas at El Paso
Robust Penalized Density Power Divergence Regression With Scad Penalty For High Dimensional Data Analysis, Maxwell Kwesi Mac-Ocloo
Open Access Theses & Dissertations
Amidst the exponential surge in big data, managing high-dimensional datasets across diverse fields and industries has emerged as a significant challenge. Conventional statistical methods struggle to handle their complexity, making analysis intricate. In response, we've formulated a robust estimator tailored to counter outliers and heavy-tailed errors. Our approach integrates the SCAD penalty into the Density Power Divergence method, effectively reducing insignificant coefficients to zero. This enhances analysis precision and result reliability.We benchmark our robust and penalized model against existing techniques like Huber, Tukey, LASSO, LAD, and LAD-LASSO. Employing both simulated and UCI machine learning repository datasets, we assess method performance …
Robust Mahalanobis K-Means Algorithm In Comparison With Other Existing Clustering Methods.,
2023
University of Texas at El Paso
Robust Mahalanobis K-Means Algorithm In Comparison With Other Existing Clustering Methods., Eleazer Tabi Serebour
Open Access Theses & Dissertations
This study enhances K-means Mahalanobis clustering using Density Power Divergence (DPD) for outlier handling and detection. Through the utilization of simulations and the analysis of real-world data, our approach consistently outperforms standard K-means, Mahalanobis K-means, Fuzzy C-means, and others in clustering datasets with outliers. While our method performs similarly to others on spherical datasets, it ranks second to DBSCAN for arbitrary shapes. We showcase its superiority on real-life datasets (Iris flower and wheat seed), demonstrating resilient outlier identification. By navigating various structures and cluster characteristics, our Modified Mahalanobis K-means method proves adaptable and robust, offering insights into diverse clustering scenarios. …
Geometric Morphometric Analysis Of Modern Viperid Vertebrae Facilitates Identification Of Fossil Specimens,
2023
East Tennessee State University
Geometric Morphometric Analysis Of Modern Viperid Vertebrae Facilitates Identification Of Fossil Specimens, Lance D. Jessee
Electronic Theses and Dissertations
Snake vertebrae are common in the fossil record, whereas cranial remains are generally fragile and rare. Consequently, vertebrae are the most commonly studied fossil element of snakes. However, identification of snake vertebrae can be problematic due to extensive variation. This study utilizes 2-D geometric morphometrics and canonical variates analysis to 1) reveal variation between genera and species and 2) classify vertebrae of modern and fossil eastern North American Agkistrodon and Crotalus. The results show that vertebrae of Agkistrodon and Crotalus can reliably be classified to genus and species using these methods. Based on the statistical analyses, four of the …
Editorial,
2023
Department of Environmental Health Faculty of Public Health Universitas Indonesia
