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Drosophila Melanogaster Selection For Survival After Infection With Bacillus Cereus Spores: Evolutionary Genetic And Phenotypic Investigations Of Respiration And Movement, Junjie Ma, Andrew K. Benson, Stephen D. Kachman, Deidra J. Jacobsen, Lawrence G. Harshman 2013 University of Nebraska-Lincoln

Drosophila Melanogaster Selection For Survival After Infection With Bacillus Cereus Spores: Evolutionary Genetic And Phenotypic Investigations Of Respiration And Movement, Junjie Ma, Andrew K. Benson, Stephen D. Kachman, Deidra J. Jacobsen, Lawrence G. Harshman

Department of Statistics: Faculty Publications

Laboratory populations of D.melanogaster have been subjected to selection for survival after live spores of B. cereus were introduced as a pathogenic agent. The present study was designed to investigate correlated traits: respiration as ametabolic trait and movement as a behavioral trait.An underlying hypothesiswas that the evolution of increased survival after B. cereus infection exerts ametabolic cost associated with elevated immunity and this would be detected by increased respiration rates. There was support for this hypothesis in the male response to selection, but not for selected-line females. Two phenotypic effects were also observed in the study. Females especially showed a …


The Change In Differing Leukocyte Populations During Vaccination To Bovine Respiratory Disease And Their Correlations With Lung Scores, Health Records, And Average Daily Gain, R. J. Leach, C. G. Chitko-McKown, G. L. Bennett, S. A. Jones, Stephen D. Kachman, J. W. Keele, K. A. Leymaster, R. M. Thallman, L. A. Kuehn 2013 ARS-USDA, U.S. Meat Animal Research Center

The Change In Differing Leukocyte Populations During Vaccination To Bovine Respiratory Disease And Their Correlations With Lung Scores, Health Records, And Average Daily Gain, R. J. Leach, C. G. Chitko-Mckown, G. L. Bennett, S. A. Jones, Stephen D. Kachman, J. W. Keele, K. A. Leymaster, R. M. Thallman, L. A. Kuehn

Department of Statistics: Faculty Publications

Bovine respiratory disease (BRD) is the most economically important disease in U.S. feedlots. Infection can result in morbidity, mortality, and reduced average daily gain. Cheap and reliable genetic methods of prediction and protection from BRD would be highly advantageous to the industry. The immune response may correlate with BRD incidence. Cattle (n = 2,182) were vaccinated against common viral and bacterial pathogens of BRD. Two blood samples were collected, one during booster vaccination and one 21d later, enabling 3 phenotypes for each trait [prebooster (pre), postbooster (post), and delta (post minus pre)]. From the blood samples innate and adaptive responses …


Prediction In M-Complete Problems With Limited Sample Size, Jennifer Lynn Clarke, Bertrand Clarke, Chi-Wai Yu 2013 University of Miami

Prediction In M-Complete Problems With Limited Sample Size, Jennifer Lynn Clarke, Bertrand Clarke, Chi-Wai Yu

Department of Statistics: Faculty Publications

We define a new Bayesian predictor called the posterior weighted median (PWM) and compare its performance to several other predictors including the Bayes model average under squared error loss, the Barbieri-Berger median model predictor, the stacking predictor, and the model average predictor based on Akaike's information criterion. We argue that PWM generally gives better performance than other predictors over a range of M-complete problems. This range is between the M-closed-M-complete boundary and the M-complete- M-open boundary. Indeed, as a problem gets closer to M-open, it seems that M-complete predictive methods begin to break down. Our comparisons rest on extensive simulations …


Comparison Of Molecular Breeding Values Based On Within- And Across-Breed Training In Beef Cattle, Stephen D. Kachman, Matthew L. Spangler, Gary L. Bennett, Kathryn J. Hanford, Larry A. Kuehn, Warren M. Snelling, Mark Thallman, Mahdi Saatchi, Dorian J. Garrick, Robert D. Schnabel, Jeremy F. Taylor, E John Pollak 2013 University of Nebraska-Lincoln

Comparison Of Molecular Breeding Values Based On Within- And Across-Breed Training In Beef Cattle, Stephen D. Kachman, Matthew L. Spangler, Gary L. Bennett, Kathryn J. Hanford, Larry A. Kuehn, Warren M. Snelling, Mark Thallman, Mahdi Saatchi, Dorian J. Garrick, Robert D. Schnabel, Jeremy F. Taylor, E John Pollak

Department of Statistics: Faculty Publications

Background: Although the efficacy of genomic predictors based on within-breed training looks promising, it is necessary to develop and evaluate across-breed predictors for the technology to be fully applied in the beef industry. The efficacies of genomic predictors trained in one breed and utilized to predict genetic merit in differing breeds based on simulation studies have been reported, as have the efficacies of predictors trained using data from multiple breeds to predict the genetic merit of purebreds. However, comparable studies using beef cattle field data have not been reported.

Methods: Molecular breeding values for weaning and yearling weight …


Correlation Coefficient Of Interval Neutrosophic Set, Said Broumi, Florentin Smarandache 2013 University of New Mexico

Correlation Coefficient Of Interval Neutrosophic Set, Said Broumi, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

In this paper we introduce for the first time the concept of correlation coefficients of interval valued neutrosophic set (INS for short). Respective numerical examples are presented.


Mapping And Decomposing Scale-Dependent Soil Moisture Variability Within An Inner Bluegrass Landscape, Carla Landrum 2013 University of Kentucky

Mapping And Decomposing Scale-Dependent Soil Moisture Variability Within An Inner Bluegrass Landscape, Carla Landrum

Theses and Dissertations--Plant and Soil Sciences

There is a shared desire among public and private sectors to make more reliable predictions, accurate mapping, and appropriate scaling of soil moisture and associated parameters across landscapes. A discrepancy often exists between the scale at which soil hydrologic properties are measured and the scale at which they are modeled for management purposes. Moreover, little is known about the relative importance of hydrologic modeling parameters as soil moisture fluctuates with time. More research is needed to establish which observation scales in space and time are optimal for managing soil moisture variation over large spatial extents and how these scales are …


Do Non-Response Follow-Ups Improve Or Reduce Data Quality?: A Review Of The Existing Literature, Kristen Olson 2013 University of Nebraska-Lincoln

Do Non-Response Follow-Ups Improve Or Reduce Data Quality?: A Review Of The Existing Literature, Kristen Olson

Department of Sociology: Faculty Publications

The paper systematically reviews existing literature on the relationship between the level of effort to recruit a sampled person and the measurement quality of survey data. Hypotheses proposed for this relationship are reviewed. Empirical findings for the relationship between level of effort as measured by paradata (the number of follow-up attempts, refusal conversion and time in the field) and question-specific item non-response rates, aggregate measures of item non-response rates, response accuracy and various measurement errors on attitudinal questions are examined through a qualitative review.


The Dirty “S” Word: Innovative Teaching Techniques For Counselor Educators Facilitating Learning In Statistics And Research, Rebecca L. Tadlock-Marlo, Megan Michalak 2012 Eastern Illinois University

The Dirty “S” Word: Innovative Teaching Techniques For Counselor Educators Facilitating Learning In Statistics And Research, Rebecca L. Tadlock-Marlo, Megan Michalak

Faculty Research & Creative Activity

Innovative pedagogy will be presented and discussed to help make research a less painful class to both teach and learn. Foci include teaching methods, potential assignments, and suggestions for activities to help facilitate a more fluid learning process for counselors. Attendees will explore aspects of helping students overcome their fear of both statistics and research.


Murine Gut Microbiota Is Defined By Host Genetics And Modulates Variation Of Metabolic Traits, Autumn M. McKnite, Maria Elisa Perez-Munoz, Lu Lu, Evan G. Williams, Simon Brewer, Penelope A. Andreux, John W. M. Bastiaansen, Xusheng Wang, Stephen D. Kachman, Johan Auwerx, Robert W. Williams, Andrew K. Benson, Daniel A. Peterson, Daniel C. Ciobanu 2012 University of Nebraska-Lincoln

Murine Gut Microbiota Is Defined By Host Genetics And Modulates Variation Of Metabolic Traits, Autumn M. Mcknite, Maria Elisa Perez-Munoz, Lu Lu, Evan G. Williams, Simon Brewer, Penelope A. Andreux, John W. M. Bastiaansen, Xusheng Wang, Stephen D. Kachman, Johan Auwerx, Robert W. Williams, Andrew K. Benson, Daniel A. Peterson, Daniel C. Ciobanu

Department of Statistics: Faculty Publications

The gastrointestinal tract harbors a complex and diverse microbiota that has an important role in host metabolism. Microbial diversity is influenced by a combination of environmental and host genetic factors and is associated with several polygenic diseases. In this study we combined next-generation sequencing, genetic mapping, and a set of physiological traits of the BXD mouse population to explore genetic factors that explain differences in gut microbiota and its impact on metabolic traits. Molecular profiling of the gut microbiota revealed important quantitative differences in microbial composition among BXD strains. These differences in gut microbial composition are influenced by host-genetics, which …


A Study Of Women Working In The Actuarial Field, Jillian Emberg 2012 Actuarial Mathematics Concentration

A Study Of Women Working In The Actuarial Field, Jillian Emberg

Honors Projects in Mathematics

The goal of this project is to examine how women fit into the actuarial career path and how cultural expectations, biological factors, and personal aspirations affect their experiences in the field. Dramatic changes in the profession have occurred since its emergence in the nineteenth century to become more welcoming to women who choose to enter the profession. However, despite the equalizing demographic shifts of the field, it is still a male-dominated profession. This paper attempts to analyze why some of the changes in the demographics of the field have occurred as well as explain what factors contribute to women’s underrepresentation …


Using The R Library Rpanel For Gui-Based Simulations In Introductory Statistics Courses, Ryan M. Allison 2012 California Polytechnic State University, San Luis Obispo

Using The R Library Rpanel For Gui-Based Simulations In Introductory Statistics Courses, Ryan M. Allison

Statistics

As a student, I noticed that the statistical package R (http://www.r-project.org) would have several benefits of its usage in the classroom. One benefit to the package is its free and open-source nature. This would be a great benefit for instructors and students alike since it would be of no cost to use, unlike other statistical packages. Due to this, students could continue using the program after their statistical courses and into their professional careers. It would be good to expose students while they are in school to a tool that professionals use in industry. R also has powerful …


Random Number Generation: Types And Techniques, David F. DiCarlo 2012 Liberty University

Random Number Generation: Types And Techniques, David F. Dicarlo

Senior Honors Theses

What does it mean to have random numbers? Without understanding where a group of numbers came from, it is impossible to know if they were randomly generated. However, common sense claims that if the process to generate these numbers is truly understood, then the numbers could not be random. Methods that are able to let their internal workings be known without sacrificing random results are what this paper sets out to describe. Beginning with a study of what it really means for something to be random, this paper dives into the topic of random number generators and summarizes the key …


Sample Size Under Inverse Negative Binomial Group Testing For Accuracy In Parameter Estimation, Osval Antonio Montesinos-López, Abelardo Montesinos-López, Jose Crossa, Kent M. Eskridge 2012 Universidad de Colima

Sample Size Under Inverse Negative Binomial Group Testing For Accuracy In Parameter Estimation, Osval Antonio Montesinos-López, Abelardo Montesinos-López, Jose Crossa, Kent M. Eskridge

Department of Statistics: Faculty Publications

Background:The group testing method has been proposed for the detection and estimation of genetically modified plants (adventitious presence of unwanted transgenic plants, AP). For binary response variables (presence or absence), group testing is efficient when the prevalence is low, so that estimation, detection, and sample size methods have been developed under the binomial model. However, when the event is rare (low prevalence

Methodology/Principal Findings: This research proposes three sample size procedures (two computational and one analytic) for estimating prevalence using group testing under inverse (negative) binomial sampling. These methods provide the required number of positive pools (rm) …


Application Of Inter-Die Rank Statistics In Defect Detection, Vivek Bakshi 2012 Portland State University

Application Of Inter-Die Rank Statistics In Defect Detection, Vivek Bakshi

Dissertations and Theses

This thesis presents a statistical method to identify the test escapes. Test often acquires parametric measurements as a function of logical state of a chip. The usual method of classifying chips as pass or fail is to compare each state measurement to a test limit. Subtle manufacturing defects are escaping the test limits due to process variations in deep sub-micron technologies which results in mixing of healthy and faulty parametric test measurements. This thesis identifies the chips with subtle defects by using rank order of the parametric measurements. A hypothesis is developed that a defect is likely to disturb the …


Muscle Organization In Individuals With And Without Pain And Joint Dysfunction, J. C. Nickel, Y. M. Gonzalez, W. D. McCall, R. Ohrbach, D. B. Marx, H. Liu, L. R. Iwasaki 2012 University of Missouri-Kansas City

Muscle Organization In Individuals With And Without Pain And Joint Dysfunction, J. C. Nickel, Y. M. Gonzalez, W. D. Mccall, R. Ohrbach, D. B. Marx, H. Liu, L. R. Iwasaki

Department of Statistics: Faculty Publications

Central nervous system organization of masticatory muscles determines the magnitude of joint and muscle forces. Validated computer-assisted models of neuromuscular organization during biting were used to determine organization in individuals with and without temporomandibular disorders (TMD). Ninety-one individuals (47 women, 44 men) were assigned to one of four diagnostic groups based on the presence (+) or absence (-) of pain (P) and bilateral temporomandibular joint disc displacement (DD). Electromyography and bite-forces were measured during right and left incisor and molar biting. Two three-dimensional models employing neuromuscular objectives of minimization of joint loads (MJL) or muscle effort (MME) simulated biting tasks. …


Drosophila Melanogaster Selection For Survival Of Bacillus Cereus Infection: Life History Trait Indirect Responses, Junjie Ma, Andrew K. Benson, Stephen D. Kachman, Zhen Hu, Lawrence G. Harshman 2012 University of Nebraska - Lincoln

Drosophila Melanogaster Selection For Survival Of Bacillus Cereus Infection: Life History Trait Indirect Responses, Junjie Ma, Andrew K. Benson, Stephen D. Kachman, Zhen Hu, Lawrence G. Harshman

Department of Statistics: Faculty Publications

To study evolved resistance/tolerance in an insect model, we carried out an experimental evolution study using D. melanogaster and the opportunistic pathogen B. cereus as the agent of selection. The selected lines evolved a 3.0- to 3.3-log increase in the concentration of spores required for 50% mortality after 18–24 generations of selection. In the absence of any treatment, selected lines evolved an increase in egg production and delayed development time. The latter response could be interpreted as a cost of evolution. Alternatively, delayed development might have been a target of selection resulting in increased adult fat body function including production …


Prediction In Several Conventional Contexts, Bertrand Clarke, Jennifer clarke 2012 University of Miami

Prediction In Several Conventional Contexts, Bertrand Clarke, Jennifer Clarke

Department of Statistics: Faculty Publications

We review predictive techniques from several traditional branches of statistics. Starting with prediction based on the normal model and on the empirical distribution function, we proceed to techniques for various forms of regression and classification. Then, we turn to time series, longitudinal data, and survival analysis. Our focus throughout is on the mechanics of prediction more than on the properties of predictors.


Comment On Article By Sancetta, Bertrand Clarke 2012 University of Miami

Comment On Article By Sancetta, Bertrand Clarke

Department of Statistics: Faculty Publications

This paper makes a landmark contribution in three senses.

First, it provides many results that are fundamentally important in their own right. I refer specifically to Theorems 3 and 8. Theorem 3 treats arbitrary loss functions by breaking the integral into two terms, one It, where a difference of losses is bounded and another, IIt, where a bound on the moments of a difference of losses must be used. (All notation here is the same as the author's unless noted otherwise.) The treatment of these two terms reveals the role of the relative entropy and how the tails of the …


The Dirty “S” Word: Innovative Teaching Techniques For Counselor Educators Facilitating Learning In Statistics And Research, Rebecca Tadlock-Marlo, Megan Michalak 2012 Eastern Illinois University

The Dirty “S” Word: Innovative Teaching Techniques For Counselor Educators Facilitating Learning In Statistics And Research, Rebecca Tadlock-Marlo, Megan Michalak

Faculty Research & Creative Activity

Innovative pedagogy will be presented and discussed to help make research a less painful class to both teach and learn. Foci include teaching methods, potential assignments, and suggestions for activities to help facilitate a more fluid learning process for counselors. Attendees will explore aspects of helping students overcome their fear of both statistics and research.


A General Family Of Dual To Ratio-Cum-Product Estimator In Sample Surveys, Florentin Smarandache, Rajesh Singh, Mukesh Kumar, Pankaj Chauhan, Nirmala Sawan 2011 University of New Mexico

A General Family Of Dual To Ratio-Cum-Product Estimator In Sample Surveys, Florentin Smarandache, Rajesh Singh, Mukesh Kumar, Pankaj Chauhan, Nirmala Sawan

Branch Mathematics and Statistics Faculty and Staff Publications

This paper presents a family of dual to ratio-cum-product estimators for the finite population mean. Under simple random sampling without replacement (SRSWOR) scheme, expressions of the bias and mean-squared error (MSE) up to the first order of approximation are derived. We show that the proposed family is more efficient than usual unbiased estimator, ratio estimator, product estimator, Singh estimator (1967), Srivenkataramana (1980) and Bandyopadhyaya estimator (1980) and Singh et al. (2005) estimator. An empirical study is carried out to illustrate the performance of the constructed estimator over others.


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