Organic Chemistry Commons^™

Studies In Asymmetric Synthesis: Supramolecular Catalysis, C–H Activation, And D-Cycloserine Synthesis, Nathan C. Thacker

Department of Chemistry: Dissertations, Theses, and Student Research

Rh-catalyzed asymmetric hydrogenation has emerged as a powerful tool for the manufacturing of chiral pharmaceuticals. While the mechanism is well understood, catalyst design a priori is not yet possible. Supramolecular catalysis, the use of non-covalent forces to affect a catalytic process, can afford the catalyst diversity required to uncover efficient catalysts and further our understanding. Using a modular design and self-assembly, a large scale supramolecular catalyst screening in a catalyst scaffold optimization study of rhodium-catalyzed asymmetric hydrogenation was carried out. Analyzing the data yields some new insights into the roles of each module making up the supramolecular catalyst. Perhaps most …

Cyclic Phosphonium Ionic Liquids, Sharon I. Lall-Ramnarine, Joshua A. Mukhlall, James F. Wishart, Robert R. Engel, Alicia R. Romeo, Masao Gohdo, Sharon Ramati, Marc B. Berman, Sophia N. Suarez

Publications and Research

Ionic liquids (ILs) incorporating cyclic phosphonium cations are a novel category of materials. We report here on the synthesis and characterization of four new cyclic phosphonium bis(trifluoromethylsulfonyl)amide ILs with aliphatic and aromatic pendant groups. In addition to the syntheses of these novel materials, we report on a comparison of their properties with their ammonium congeners. These exemplars are slightly less conductive and have slightly smaller self-diffusion coefficients than their cyclic ammonium congeners.

Br[O/]Nsted Acid Catalyzed Asymmetric Allylation And Propargylation Of Aldehydes, Pankaj Jain

USF Tampa Graduate Theses and Dissertations

Carbonyl allylation and propargylation reactions have been an important tool for the stereocontrolled formation of carbon-carbon bonds for synthetic chemists. The chiral homoallylic and homopropargylic alcohols obtained from these reactions serve as versatile intermediates for the synthesis of natural and pharmaceutical products. Over the past three decades and continuing on, various synthetic groups around the globe have directed their research towards the efficient synthesis of these chiral moieties. In spite extensive research, asymmetric allylation and propargylation reactions remain an enduring challenge in organic chemistry.

Chapter 1 of this thesis describes the first phosphoric acid catalyzed asymmetric allylboration of aldehydes. We …

Spectral Data For "Probing The Human Estrogen Receptor-Alpha Binding Requirements For Phenolic Mono- And Do-Hydroxyl Compounds: A Combined Synthesis, Binding And Docking Study", Christopher Mccullough, Terrence S. Neumann, Jayapal Reddy Gone, Zhengjie He, Julie Lukesh, Rajesh K. Pandey, William A. Donaldson, Daniel S. Sem

Natural Products Synthesis via Organoiron Methodology

Spectral data used in the course of researching "Probing the human estrogen receptor-alpha binding requirements for phenolic mono- and do-hydroxyl compounds: A combined synthesis, binding and docking study".

Various estrogen analogs were synthesized and tested for binding to human ERα using a fluorescence polarization displacement assay. Binding affinity and orientation were also predicted using docking calculations. Docking was able to accurately predict relative binding affinity and orientation for estradiol, but only if a tightly bound water molecule bridging Arg394/Glu353 is present. Di-hydroxyl compounds sometimes bind in two orientations, which are flipped in terms of relative positioning of their hydroxyl groups. …

A New Methodology For The Synthesis Of 2-Alkyl-5,6-Bis(Alkylthio)Benzo[D]Thiazole-4,7-Dione, Jeena Foronda

Capstone Research Projects

Cancer is a rapidly growing fatal disease and with the various thiazole compounds being scientifically generated, possible treatment options can be implemented. Proper synthesis of 2,3-dimethoxy-1,4-benzoquinone allows for a variety of compounds to be made with further treatment of alkylthio reagents. Both thioacetamide and thiobenzamide are used to react with 2,3-dimethoxy-1,4-benzoquinone in order to build a library of thiazoles. Final compounds can be tested for the ability to inhibit recombinant enzyme activity and the capability to kill tumor cells. A basic oxidation procedure along with nucleophilic attack was used to create target products.

New Carbohydrate-Based Anti-Cancer And Anti-Bacterial Vaccines, Zhifang Zhou

Wayne State University Dissertations

The unique carbohydrates expressed on the surface of cancer, bacterial, viral and fungal cells are excellent target antigens for the design of therapeutic or preventive vaccines. However, as antigens carbohydrates have problems. First, carbohydrates usually have low immunogenicity. Second, even if immunogenic, carbohydrates typically elicit T cell-independent immune responses. To overcome these problems and design useful vaccines based on carbohydrate antigens, they are usually coupled with carrier proteins to form conjugates to enhance the immunogenicity of the antigens. However, there are still some issues existing in glycoprotein vaccines, such as poor reproducibility of the conjugates, difficulties in quality control and …

Deuterium Tracer Study Of The Mechanism Of Iron Catalyzed Fischer-Tropsch Synthesis, Yunxin Liao

Online Theses and Dissertations

The Fischer-Tropsch Synthesis (FTS) was invented in 1920s, shortly after its invention, it became an important way to produce synthetic fuels. The FTS is also an important way to understand the origin of life. Even though the FTS has been used to produce liquid fuels commercially for a relatively long time, the mechanism of FTS is still unclear, a mechanism can explain all the experimental observations has not been discovered yet.

By conducting H2/D2 switching experiments we found that there was an inverse isotope effect in the Fe catalyzed FTS. The rate of hydrocarbon production was increased when syngas H2/CO …

Water Purification Through Ion Exchange, Brittany Webb

Natural Sciences Student Research Presentations

Water purification through ion exchange is the process of removing undesired contaminates from water through the exchange of ions between two electrolytes. Clinoptilolite is used as an exchange site.

Basic Features Of A Cell Electroporation Model: Illustrative Behavior For Two Very Different Pulses, Reuben S. Son, Kyle C. Smith, Thiruvallur R. Gowrishankar, P. Thomas Vernier, James C. Weaver

Bioelectrics Publications

Science increasingly involves complex modeling. Here we describe a model for cell electroporation in which membrane properties are dynamically modified by poration. Spatial scales range from cell membrane thickness (5 nm) to a typical mammalian cell radius (10 μm), and can be used with idealized and experimental pulse waveforms. The model consists of traditional passive components and additional active components representing nonequilibrium processes. Model responses include measurable quantities: transmembrane voltage, membrane electrical conductance, and solute transport rates and amounts for the representative "long" and "short" pulses. The long pulse-1.5 kV/cm, 100 μs-evolves two pore subpopulations with a valley at ~5 …

Spectroscopic Characterization Of Dissolved Organic Matter: Insights Into The Linkage Between Sources And Chemical Composition, Xiaoyan Cao

Chemistry & Biochemistry Theses & Dissertations

This dissertation investigated the chemical structure of DOM by advanced solid-state nuclear magnetic resonance (NMR) spectroscopy and Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) techniques, as well as isotopic measurements and UV-visible spectroscopy, to shed light on the linkages between DOM sources and DOM composition. Unique and extensive sets of DOM samples studied here were isolated from various aquatic systems, covering end-member environments in which DOM is considered either microbially derived or terrestrially derived, and areas in which DOM has characteristics intermediate between the two end members. Important insights into specific site-related questions were also gained such as …

Synthesis And Characterization Of Sugar Based Low Molecular Weight Gelators And The Preparation Of Chiral Sulfinamides, Hari Prasad Reddy Mangunuru

Chemistry & Biochemistry Theses & Dissertations

Low molecular weight gelators (LMWGs) have received considerable attention in the field of chemistry from last few decades. These compounds form self-assembled fibrous networks like micelles, cylindrical, sheets, fibers, layers and so on. The fibrous network entraps the solvent and forms gel, because of the self-assembly phenomenon and their demonstrated potential uses in a variety of areas, ranging from environmental to medicinal applications.

Sugars are good starting materials to synthesize the new class of LMWG's, because these are different from some expensive materials, these are natural products. We have synthesized and characterized the LMGS's based on D-glucose and D …

Advances In Functionalized Ionic Liquids As Reagents And Scavengers In Organic Synthesis, Manoj Kumar Muthyala, Kavya Velisetti, Keykavous Parang, Anil Kumar

Pharmacy Faculty Articles and Research

Functionalized ionic liquids (FILs) synthesized with specific desired chemical properties have shown promising results in various areas of organic synthesis. In supported organic synthesis, FILs have become known as a new alternative to commonly used PEG and fluorous soluble supports. This review summarizes the progress of recent development in the synthesis of functionalized ionic liquids with emphasis on their applications as reagents and scavengers in organic synthesis.

Is Your Wine Breathing Too Much?, Madison L. Cooper

Natural Sciences Student Research Presentations

This poster compares two studies on oxygen concentration in wine, one by Dr. Milena Lambri and the other by Nikolaos Kontoudakis. This is a poster for the Natural Sciences Poster Session at Parkland College

How Environmental Conditions Affect Cattle Diets, Kalynne R. Ewerks

Natural Sciences Student Research Presentations

This poster presented at the Natural Sciences Poster Session at Parkland College, outlines a study that shows that protein content in animal feed is decreased by increased temperatures and briefly identifies measures that might be taken to counteract an impact on food supply.

Murchison Chondrite, Marisol Chirinos

Natural Sciences Student Research Presentations

Murchson Chondrite is a carbonaceous meteorite that fell in a small town called Murchson in Victoria, Australia, on September 28, 1969. It is believed to be one of the most primitive meteorites to fall on earth. Amino acides found in Murchison differ in structures from amino acids found on Earth. While the carbon atom in the carboxylic acid and amion group of biological terrestrial amino acids have a hydrogen atom attached to it, the Murchison's amino acids have a methyl group instead.

Synthesis Of Peptide-Α-Phenylthioesters Using A Solid Support With A Photoreactive Nitroindoline Moiety, Andrew Pardo

Open Access Theses & Dissertations

Peptide-alpha-phenylthioesters are particularly reactive starting materials for Native Chemical Ligation. Here we present a new photochemical method for the synThesis of peptide-alpha-phenylthioesters under neutral reaction conditions with various C-terminal amino acids. The peptides were synthesized by Fmoc strategy on Sieber amide resin with a photoreactive nitroindoline linker. After cleavage of the photoreactive and fully protected peptide from the beads with dilute trifluoroacetic acid an auxiliary nucleophile such as N-hydroxybenzotriazole or N-hydroxysuccinimide is used to photochemically generate the activated peptide ester in situ. Then thiophenol is introduced in the dark. This new method enabled us to synthesize peptide-alpha-phenylthioesters up to 21 …

Ru/C: A Simple Heterogeneous Catalyst For The Amination Of Azoles Under Ligand Free Conditions, K. Harsha Vardhan Reddy, B. S.P. Anil Kumar, V. Prakash Reddy, R. Uday Kumar, Y. V.D. Nageswar

Chemistry Faculty Research & Creative Works

A ligand free Ru/C-catalyzed amination of 2-halo azoles with a broad scope of aminating reagents has been developed. A variety of 2-aminoazole derivatives were synthesized in moderate to good yields by utilizing this protocol. The methodology is operationally simple and not sensitive to air and moisture. It provides potentially useful products by using an inexpensive and recyclable catalytic system under ligand free conditions without significant loss of its catalytic activity up to four cycles. This journal is

Science Classics, Mark Masthay

Chemistry Faculty Publications

An essay on the impact of the works in the Imprints and Impressions: Milestones in Human Progress, an exhibition of rare books from the collection of Stuart Rose. Exhibition was held Sept. 29-Nov. 9, 2014, at the University of Dayton.

Electronic Effects In Oxidation Reactions Utilizing Dinuclear Copper Complexes With The Bis[3-(2-Hydroxybenzylideneamino)Phenyl] Sulfone Ligand, Armando M. Guidote Jr, Ronald L. Reyes, Riyo Kashihara, Yasuhiko Kurusu, Yoshihiro Masuyama

Chemistry Faculty Publications

Copper acetate and the ligands bis[3-(3-tert-butyl-2-hydroxy-5-methoxybenzylideneamino)phenyl] sulfone and bis[3-(3,5-di-tert-butyl-2-hydroxybenzylideneamino)phenyl] sulfone were reacted to form the complexes with 2:1 copper:ligand ratio, Cu2[B(t-Bu) (OMe)BAPS](µ-OCH3)2 (4) and with 2:2 copper:ligand ratio, Cu2[B(t-Bu)2BAPS]2 (5), respectively. Structures of 4 and 5 were determined based on IR, UV-Vis, and FAB-MS data in comparison with previously characterized related copper complexes. The two complexes 4 and 5 were utilized in the oxidation of the substrates 2,4- and 2,6-di-tertbutylphenol (dtbp) at -50C with H2O2 in CH2Cl2. The coupling products are preferred in both cases. For 2,4-dtbp, yields of 4,600% and 7,200% of 3,3’,5,5’-tetra-tert-butyl-2,2’- biphenol were achieved with the use …

Low Speed Current Bearing Anti-Force Waves, M. Hemmati, W. P. Childs, H. Shojaei, H. Morris

Journal of the Arkansas Academy of Science

For theoretical investigation of electrical breakdown of a gas, we apply a one-dimensional, steady profile, constant velocity, three-component (electrons, ions and neutral particles) fluid model. Our fluid model consists of the equations of conservation of mass, momentum and energy, coupled with the Poison’s equation. The set of equations is referred to as the electron fluid dynamical equations (EFD). This investigation involves breakdown waves with a substantial current behind the wave front, and waves for which the electric field force on electrons is in the opposite direction of the wave propagation (anti-force waves – lightning return stroke). Therefore, the set of …