Oceanography and Atmospheric Sciences and Meteorology Commons^™

Interactions Between Changing Pco2, N2 Fixation, And Fe Limitation In The Marine Unicellular Cyanobacterium Crocosphaera, Fei-Xue Fu, Margaret R. Mulholland, Nathan S. Garcia, Aaron Beck, Mark E. Warner, Sergio A. Sañudo, David A. Hutchins

OES Faculty Publications

We examined the physiological responses of steady-state iron (Fe)-replete and Fe-limited cultures of the biogeochemically critical marine unicellular diazotrophic cyanobacterium Crocosphaera at glacial (19 Pa; 190 ppm), current (39 Pa; 380 ppm), and projected year 2100 (76 Pa; 750 ppm) CO₂ levels. Rates of N₂ and CO₂ fixation and growth increased in step with increasing partial pressure of CO₂ (pCO₂), but only under Fe- replete conditions. N₂) and carbon fixation rates at 75 Pa CO₂ were 1.4-1.8-fold and 1.2-2.0-fold higher, respectively, relative to those at present day and glacial pCO_{2 …}

Food Limitation In Larval Fish: Ontogenetic Variation In Feeding Scope And Its Potential Effect On Survival, Alexander B. Bochdansky, Peter Grønkjær, Pierre Pepin, William C. Leggett

OES Faculty Publications

We used the radiated shanny Ulvaria subbifurcataas a model species to explore the relative gut fullness from hatch to metamorphosis of wild larvae, and compared these values with those of laboratory-reared larvae fed at maximum rates. Ingestion rates of most wild larvae were above starvation levels but below the maximum feeding levels of laboratory-reared larvae. Twenty-six percent of freshly-hatched wild larvae and 11% of large, pre-settlement wild larvae had insufficient food in their stomach to satisfy metabolic requirements. These results, taken on their own, are consistent with the much hypothesized increased foraging performance and survival of larger larvae relative …

Nutrient And Carbon Dynamics In The Chesapeake Bay Outflow Plume And Their Effect On The Coastal Ocean Environment, Katherine C. Filippino

OES Theses and Dissertations

Seasonally resolved nutrient and carbon fluxes from estuaries to the coastal ocean are poorly constrained. Nutrient and carbon cycling in highly productive regions like the Chesapeake Bay outflow plume and surrounding coastal environments greatly affect our global understanding of carbon cycling. The overall questions for the research described in this dissertation stem from the need to close global carbon budgets, and obtain a fundamental understanding of nutrient dynamics in a coastal region heavily influenced by seasonality and human impacts.

Within the framework of physical characteristics of the outflow plume and through the characterization of nutrient concentrations, primary productivity rates, and …

Effect Of Hydrology On The Structure And Function Of Mangrove Ecosystems In The Can Gio Mangrove Biosphere Reserve, Vietnam, Loi Tan Le

LSU Doctoral Dissertations

The influence of hydrology on the mangrove forests of Vietnam has received little scientific attention, even though hydrology is recognized as the primary forcing function in mangrove ecosystems worldwide. The purpose of this dissertation research was to determine the effects of hydrology on specific structural attributes and functional processes within the mangrove forests of Can Gio, a province in southeastern Vietnam. Khe Vinh (KV) and Mui O (MO), two locations within compartment 17 of the Can Gio Mangrove Biosphere Reserve, were chosen as study sites. This research addressed two questions: (1) What are the characteristics of the hydrological regime at …

The Effect Of An Inshore Artificial Reef On The Community Structure And Feeding Ecology Of Estuarine Fishes In Barataria Bay, Louisiana, Kirsten A. Simonsen

LSU Master's Theses

Recently we have begun to understand the importance of inshore hard-bottom substrate, including oyster reefs, to estuarine fish communities in the Gulf of Mexico, especially in the context of identifying Essential Fish Habitat (EFH). However, problems such as habitat loss, disease, overharvest, and failure to replace shell have severely decreased the amount of high-relief oyster reef habitat available to finfish. The purpose of this project was to establish an artificial high-relief mimic-oyster reef in Barataria Bay, Louisiana, and monitor its use by economically and ecologically important finfish, including spotted seatrout (Cynoscion nebulosus) and Atlantic croaker (Micropogonias undulatus). The finfish and …

Assessment Of Oxygen Sources And Sinks In The Northern Gulf Of Mexico Using Stable Oxygen Isotopes, Zoraida Jazmin Quinones-Rivera

LSU Doctoral Dissertations

Coastal hypoxia (< 2 mg O2L-1) represents a global problem that continues to worsen as nutrient fluxes to these areas increase. The second largest zone of human-induced hypoxia is located on the Louisiana continental shelf where hypoxic bottom waters commonly occur during summertime. This region is strongly impacted by the large flux of freshwater and nutrients from the Mississippi River, which influences both biological and physical processes that control oxygen dynamics. Yet, based on oxygen concentration measurements alone, it is difficult to separate the effects of biological factors from physical factors. To address this problem, I used a dual budget approach to assess the importance of oxygen sources and sinks on the Louisiana continental shelf. The dual budget was based on using stable oxygen isotopes (ä18O) in combination with conventional oxygen concentration measurements. To analyze temporal trends, surface and bottom water samples were collected monthly between July 2001 and July 2003 along an onshore-offshore transect. For better spatial resolution, shelfwide sampling was conducted extending from the Mississippi River Delta to the Louisiana-Texas border in the month of July of 2001, 2002, and 2003. Oxygen saturations values ranged between 180% at the surface and almost 0% close to the bottom with a corresponding range of ä18O values from 15‰ to 50‰. Biological parameters were important during all seasons for surface oxygen dynamics. The effects of physical factors were less apparent, except during severe physical disturbances. Bottom water oxygen dynamics showed clear seasonal signals of high oxygen depletion and larger contributions of benthic respiration during the summer, which corresponded to the strong stratification of the water column. In bottom waters, summer oxygen depletion was predominantly due to benthic respiration, accounting for about 73%, 80% and 60% of the total oxygen loss for 2001, 2002 and 2003 respectively. Model estimates of production/respiration (P/R) ratio during the July shelfwide cruises indicated that surface waters were productive with an average calculated P/R above 1. Depth stratified sampling (5 m intervals), which started in July 2002, showed that productivity in the mixed layer (5 to 10 m) was not homogeneous. Calculated P/R exceeded 1 only in the surface layer, while at 5 m P/R was approximately 1 and at a depth of 10 m, P/R was less than 1. Additionally, hypoxic conditions were only detected within 5 m of the bottom sediments. The dual budget approach yielded new estimates of productivity dynamics in surface waters and of sediment oxygen demand in bottom waters. For the first time, this study provided routine insight into productivity and respiration dynamics over large temporal and spatial scales. This could not have been accomplished using traditional methods because they commonly rely on time-consuming incubations. The study has shown that respiration dynamics in bottom waters vary seasonally with higher contribution of benthic respiration during stratified summer conditions and prevalent water column respiration during fall and winter. In contrast, seasonality in surface waters was less pronounced as productivity was more dependent on (salinity-inferred) nutrient supply than climatic forcing.

Landscape Analysis Of Vegetation Change In Coastal Louisiana Following Hurricanes Katrina And Rita, Gregory Dean Steyer

LSU Doctoral Dissertations

Investigations of hurricane disturbances on coastal vegetated communities are common, but relatively few are comprehensive across broad geographic regions. The 2005 hurricanes, Katrina and Rita, exposed Louisiana coastal landscapes to physical modifications and extensive and prolonged flooding, resulting in measurable physicochemical changes. This research used remote sensing and field investigations to regionally assess (1) porewater salinity and sulfide impacts to and recovery of coastal Louisiana vegetation communities, and (2) the importance of mineral sediment deposition on accretionary processes. Hurricane effects were most direct and prominent in eastern Louisiana from Katrina and western Louisiana from Rita, compared to central Louisiana exposed …

The Use Of Extractable Lipofuscin For Age Determination Of Crustaceans: Reply To Sheehy (2008), H. Rodger Harvey, David H. Secor, Se-Jong Ju

OES Faculty Publications

The heterogeneous mixture of metabolic by-products termed lipofuscin (LF) or age pigments has long been known to accumulate in post mitotic cells with increasing age. In crustaceans several approaches have been developed over the years to track LF accumulation and provide a proxy for chronological age. Histological approaches have been traditionally used for LF determination of crustaceans (e.g. Sheehy et al. 1994, Mar Biol 121:237-245), but over the last decade extraction approaches for neural tissues have been introduced (Ju et al. 1999, Mar Ecol Prog Ser 185:171-179) and tested (Ju et al. 2001, Mar Ecol Prog Ser 224:197-205; 2003, Fish …

Limnological Assistance For The Lake Mead National Recreation Area In Meeting The Challenge Of The Water 2025 Initiative: Quarterly Progress Report, Period Ending: December 31, 2007, Margaret N. Rees

Limnological Studies

• The limnologist position has been announced.
• Project 1: Review of the draft Boulder Basin Adaptive Management Plan is underway.
• Project 2: Development of a white paper expressing the joint needs of the entities involved in Water 2025 projects is being coordinated.
• Project 3: A bibliographic reference spreadsheet organizing literature citations related to quagga and zebra mussel research has been completed.
• Project 4: A comprehensive literature search of Lake Mead limnology is well underway; an Access database has been designed to organize reference citations; and a special collections library at UNLV is being established to house original rare documents and other …

Optical Estimation Of Auroral Ion Upflow: Theory, M. Zettergren, J. L. Semeter, P. L. Blelly, M. Diaz

Publications

This work presents a systematic analysis of optical emissions related to auroral ion upflow. Optical intensities and field‐aligned ion transport are computed for a set of monoenergetic incident electron beams using a combined fluid‐kinetic model. The kinetic portion models the energetic particle transport with a multiple stream approach and provides ionization, excitation, and heating rates to an eight‐moment fluid model of the ionosphere, which then calculates the resulting ion upflow. The analysis is used to develop a technique for estimating upward ion flux from photometric measurements at five discrete wavelengths: 427.8 nm, 557.7 nm, 630.0 nm, 732 nm, and 844.6 …

Validation Of The Aura Microwave Limb Sounder Hnomeasurements, M L. Santee, A Lambert, W G. Read, N J. Livesey, R E. Cofield, D T. Cuddy, W H. Daffer, B J. Drouin, L Froidevaux, R A. Fuller, R F. Jarnot, B W. Knosp, G L. Manney, V S. Perun, W V. Snyder, P C. Stek, R P. Thurstans, P A. Wagner, J W. Waters, G Muscari, R L. De Zafra, Jack E. Dibb, D W. Fahey, P J. Popp, T P. Marcy, K W. Jucks, G C. Toon, R A. Stachnik, P F. Bernath, C D. Boone, K A. Walker, J Urban, D Murtagh

Earth Sciences

We assess the quality of the version 2.2 (v2.2) HNO₃ measurements from the Microwave Limb Sounder (MLS) on the Earth Observing System Aura satellite. The MLS HNO₃ product has been greatly improved over that in the previous version (v1.5), with smoother profiles, much more realistic behavior at the lowest retrieval levels, and correction of a high bias caused by an error in one of the spectroscopy files used in v1.5 processing. The v2.2 HNO₃ data are scientifically useful over the range 215 to 3.2 hPa, with single-profile precision of ∼0.7 ppbv throughout. Vertical resolution is 3–4 km …

Total Depletion Of Hg° In The Upper Troposphere-Lower Stratosphere, R. Talbot, Huiting Mao, Jack E. Dibb, M A. Avery

Earth Sciences

Our current understanding of atmospheric mercury lacks fundamental details. Gas phase elemental mercury (Hg°) was measured aboard the NASA DC-8 research aircraft during the Intercontinental Chemical Transport Experiment-Phase B (INTEX-B) conducted in spring 2006 over the North Pacific. Our data confirm efficient chemical cycling of Hg° in the tropopause region and show that it is strongly anti-correlated with O₃ there, yielding a tropospheric-stratospheric mixing curve of ∼−0.20 ppqv Hg°/ppbv O₃. In addition, we found frequent total depletion of Hg° in upper tropospheric (8–12 km) air masses impacted by stratospheric influence. When O₃ mixing ratios were >300 …

Iron Sequestration In Lake Sediments From Artificial Hypolimnetic Oxygenation: Richard B. Russell Reservoir, Amanda Elrod

All Theses

The Upper Savannah River watershed has numerous impoundments, and the three largest hydroelectric reservoirs, from north to south, are Hartwell, Richard B. Russell, and J. Strom Thurmond Lakes. During the summer months, these reservoirs undergo thermal and chemical stratification, which results in the formation of cool, hypoxic/anoxic hypolimnia and warm, oxic epilimnion. To maintain fisheries habitat, the United States Army Corps of Engineers operates a hypolimnetic oxygenation system in the forebay of Richard B. Russell Lake. The purpose of this system is to improve the water quality of the releases from Richard B. Russell Dam by maintaining a dissolved oxygen …

Water Quality Dynamics Of Lake James In The Catawba River Basin Of North Carolina, Susan Stokes

All Dissertations

Lake James is the uppermost hydropower reservoir in the Catawba River drainage in North Carolina. The Lake James Assessment (LJA) was a descriptive study initiated between Clemson University and Duke Energy Corporation to explore the physical, chemical and biological dynamics of this oligotrophic reservoir from spring 1997 through fall 1999 (Schindler 1997). The goals of this study were to ascertain the primary drivers for the chemical dynamics of Lake James, to assess the quantities of constituents entering and leaving the reservoir, where these chemicals were incorporated within the reservoir basins, and to evaluate the efficacy of the LJA chemical budget …

Sfa Weather Station-December 2007, Arthur Temple College Of Forestry And Agriculture, Stephen F. Austin State University

Weather Station Data

No abstract provided.

Histopathological Assessment And Comparison Sedimentation And Phosphate Stress On The Staghorn Coral, Acropora Cervicornis, Erin Christine Hodel

HCNSO Student Theses and Dissertations

Traditional coral reef monitoring efforts lack assessment of coral health at tissue and cellular levels. This thesis investigated tissue, cellular, and gross morphological responses of the Caribbean staghorn coral, Acropora cervicornis, to elevated sedimentation and phosphate using state-of-the-art histological techniques. Branch fragments of A. cervicornis were collected offshore Broward County, FL, acclimated for 12 weeks, subjected to a 4-week experimental period, and given a 1-week recovery period in laboratory aquaria. Treatments consisted of high doses (200 mg cm^-2 day^-1) of sedimentation (S), phosphate (4 μM) (P), and a combination of these two (S + P), in …

Diagnosis Of The July 6, 2002 Ogallala, Nebraska Flash Flood, David B. Radell, Mark R. Anderson, John W. Stoppkotte, James R. Mccormick

Department of Earth and Atmospheric Sciences: Faculty Publications

During the early morning hours of 6 July 2002, a mesoscale convective system (MCS) traversed southwestern Nebraska and produced more than 40 cm of precipitation, resulting in a flash flood that closed Interstate 80 and caused one fatality near Ogallala, Nebraska. Regional climatology yields that this flash flood ranked first in precipitation amount for a 24 hour period over the past one hundred years. Synoptic and mesoscale features similar to other flash flooding events and conducive to extremely heavy precipitation were in place over the Central Plains, including a weak upper level ridge, high precipitable water values (180% of normal), …

Lsuhsc Facilities Daily Update: December 2007, Lsuhsc Property And Facilities Management

LSUHSC Facilities Daily Updates: 2007

LSUHSC Facilities Daily Updates from December 2007.

These updates describe damage and a timeline of repairs at the LSU Health Sciences Center - New Orleans campus due to Hurricane Katrina which made landfall August 29, 2005.

Lsuhsc Facilities Biweekly Update: December 2007, Lsuhsc Property And Facilities Management

LSUHSC Facilities Biweekly Updates: 2007

LSUHSC Facilities Biweekly Updates from December 7 and 21, 2006.

These updates describe damage and a timeline of repairs at the LSU Health Sciences Center - New Orleans campus due to Hurricane Katrina which made landfall August 29, 2005.

Report On Nutria Management And Research In The Pacific Northwest, Trevor Sheffels, Mark Sytsma

Center for Lakes and Reservoirs Publications and Presentations

The nutria (Myocastor coypus) is a large semi-aquatic mammal native to South America that has been introduced to numerous countries around the world, primarily for fur farming. Nutria were introduced in Oregon and Washington in the 1930s, and feral populations were documented in 1943. Populations are known to be expanding in both Oregon and Washington, and regional nutria damage and nuisance complaints have increased in recent years. Most of the extensive damage caused by nutria is a direct result of feeding and burrowing, but nutria are also capable of transporting parasites and pathogens transmittable to humans, livestock, and …

New Ways To Collect Data In The Antarctic, Walker O. Smith, Vernon Asper

Faculty Publications

Conducting Antarctic research is challenging. Not only is the environment difficult, given low temperatures, high winds, and ice cover, but also the availability of sampling platforms is limited. The U.S. National Science Foundation has only two vessels that can routinely operate in ice‐covered waters, the research vessel/icebreaker N.B. Palmer and the Antarctic research support vessel L.M. Gould. The restricted availability of vessels makes research operations difficult to schedule, especially during austral spring and summer. Traditional sampling methods (those confined to ships and moorings) have provided insights into distributions and processes in the Southern Ocean, but new research questions require new …

Persistent Near-Bottom Aggregations Of Mesopelagic Animals Along The North Carolina And Virginia Continental Slopes, John V. Gartner Jr., Kenneth J. Sulak, Steve W. Ross, Ann Marie Necaise

United States Geological Survey: Staff Publications

Submersible observations during four missions over the North Carolina and Virginia continental slopes (184–900 m) documented the occurrence of large aggregations of mesopelagic Wshes and macronektonic invertebrates near or on the bottom. Aggregated mesopelagics formed a layer up to tens of meters deep positioned from a few centimeters to 20 m, usually <10 >m, above the substrate. Aggregations were numerically dominated by microvores, notably the myctophid Wsh Ceratoscopelus maderensis and the penaeid shrimp Sergestes arcticus. Consistently present but in relatively lower numbers, were mesopelagic predators, including the paralepidids Notolepis rissoi and Lestidium atlanticum, the eel Nemichthys scolopaceus, the …

A Summer Time Series Of Particulate Carbon In The Air And Snow At Summit, Greenland, Gayle S.W. Hagler, M Bergin, Eugene A. Smith, Jack E. Dibb

Earth Sciences

Carbonaceous particulate matter is ubiquitous in the lower atmosphere, produced by natural and anthropogenic sources and transported to distant regions, including the pristine and climate-sensitive Greenland Ice Sheet. During the summer of 2006, ambient particulate carbonaceous compounds were characterized on the Greenland Ice Sheet, including the measurement of particulate organic (OC) and elemental (EC) carbon, particulate water-soluble organic carbon (WSOC), particulate absorption coefficient (σ_ap), and particle size-resolved number concentration (PM_0.1–1.0). Additionally, parallel ∼50-day time series of water-soluble organic carbon (WSOC), water-insoluble organic carbon (WIOC), and elemental carbon (EC) were quantified at time increments of 4–24 …

Sfa Weather Station-November 2007, Arthur Temple College Of Forestry And Agriculture, Stephen F. Austin State University

Weather Station Data

No abstract provided.

Encoding Ais Binary Messages In Xml Format For Providing Hydrographic-Related Information, Schwehr Kurt, Lee Alexander

Center for Coastal and Ocean Mapping

A specification is proposed to enable hydrographic and maritime safety agencies to encode AIS messages using Extensible Markup Language (XML). It specifies the order, length, and type of fields contained in ITU-R.M.1371-1. A XML schema validates the message definitions, and a XSLT style sheet produces reference documentation in 'html' format. AIS binary messages in XML are an effective means to communicate dynamic and real-time port/waterway information. For example, tidal information can be continuously broadcast to maritime users and applied to a "tide-aware" ENC. The XML format aligns with the type of data encapsulation planned for the IHO Geospatial Standard for …

Fish And Coral Reef Communities Of The Parque Nacional Sistema Arrecifal Veracruzano (Veracruz Coral Reef System National Park) Veracruz, Mexico: Preliminary Results, Marcos Alberto Rangel Avalos, Lance K. B. Jordan, Brian K. Walker, David S. Gilliam, Elvira Carvajal Hinojosa, Richard E. Spieler

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Effective resource management requires robust baseline datasets and efficient monitoring programs to identify and quantify temporal change. The Parque Nacional Sistema Arrecifal Veracruzano (Veracruz Coral Reef System National Park) encompasses a total of 52000ha including 23 coral reefs in two island groups separated by the mouth of the Jamapa River; one near the port of Veracruz, Mexico and one approximately 20km south near Punta Antón Lizardo. Both groups receive substantial fisheries pressure and other anthropogenic impacts. Using non-destructive, visual methods we surveyed fish and benthic assemblages at 18 sites, which included 10 individual coral reefs within the Park. For fishes, …

Ais Binary Messages, Domain Examples And A Case For A Xml Message Definition Language, Schwehr Kurt

Center for Coastal and Ocean Mapping

No abstract provided.

Relationship Of Marine Information Overlays (Mios) To Current/Future Iho Standards, Lee Alexander, Michael Huet

Center for Coastal and Ocean Mapping

No abstract provided.

Demersal Fishes Associated With Lophelia Pertusa Coral And Hard-Substrate Biotopes On The Continental Slope, Northern Gulf Of Mexico, Kenneth J. Sulak, R. Allen Brooks, Kirsten E. Luke, April D. Norem, Michael Randall, Andrew J. Quaid, George E. Yeargin, Jana M. Miller, William M. Harden, John H. Caruso, Steve W. Ross

United States Geological Survey: Staff Publications

The demersal fish fauna of Lophelia pertusa (Linnaeus, 1758) coral reefs and associated hard-bottom biotopes was investigated at two depth horizons in the northern Gulf of Mexico using a manned submersible and remote sampling. The Viosca Knoll fauna consisted of at least 53 demersal fish species, 37 of which were documented by submersible video. On the 325 m horizon, dominant taxa determined from frame-by-frame video analysis included Stromateidae, Serranidae, Trachichthyidae, Congridae, Scorpaenidae, and Gadiformes. On the 500 m horizon, large mobile visual macrocarnivores of families Stromateidae and Serranidae dropped out, while a zeiform microcarnivore assumed importance on reef “Thicket” biotope, …

Lsuhsc Facilities Biweekly Update: November 2007, Lsuhsc Property And Facilities Management

LSUHSC Facilities Biweekly Updates: 2007

LSUHSC Facilities Biweekly Updates from November 9 and 26, 2006.

These updates describe damage and a timeline of repairs at the LSU Health Sciences Center - New Orleans campus due to Hurricane Katrina which made landfall August 29, 2005.