Oceanography and Atmospheric Sciences and Meteorology Commons^™

Lsuhsc Facilities Biweekly Updates: January 2012, Lsuhsc Property And Facilities Management

LSUHSC Facilities Biweekly Updates: 2012

LSUHSC Facilities Biweekly Update from January 13, 2012.

This update describes damage and a timeline of repairs at the LSU Health Sciences Center - New Orleans campus due to Hurricane Katrina which made landfall August 29, 2005.

Lsuhsc Facilities Daily Update: January 2012, Lsuhsc Property And Facilities Management

LSUHSC Facilities Daily Updates: 2012

LSUHSC Facilities Daily Updates from January 2012.

These updates describe damage and a timeline of repairs at the LSU Health Sciences Center - New Orleans campus due to Hurricane Katrina which made landfall August 29, 2005.

Variability And Trends Of Aerosol Properties Over Kanpur, Northern India Using Aeronet Data (2001–10), Dimitris G. Kaskaoutis, Ramesh P. Singh, Ritesh Gautam, Manish Sharma, P. G. Kosmopoulos, S. N. Tripathi

Mathematics, Physics, and Computer Science Faculty Articles and Research

Natural and anthropogenic aerosols over northern India play an important role in influencing the regional radiation budget, causing climate implications to the overall hydrological cycle of South Asia. In the context of regional climate change and air quality, we discuss aerosol loading variability and trends at Kanpur AERONET station located in the central part of the Indo-Gangetic plains (IGP), during the last decade (2001-10). Ground-based radiometric measurements show an overall increase in column-integrated aerosol optical depth (AOD) on a yearly basis. This upward trend is mainly due to a sustained increase in the seasonal/monthly averaged AOD during the winter (Dec-Feb) …

Acoustic Sensing Of Gas Seeps In The Deep Ocean With Split-Beam Echosounders, Thomas C. Weber, Kevin W. Jerram, Larry A. Mayer

Center for Coastal and Ocean Mapping

When in the form of free gas in the water column, methane seeps emanating from the seabed are strong acoustic targets that are often detectable from surface vessels using echo sounders.In addition to detecting that a seep is present at some location, it is also desirable to characterize the nature of the seep in terms of its morphology and flux rates. Here, we examine how much we can learn about seeps in the deep (> 1000 m) northern Gulf of Mexico using narrow-band split-beam echo sounders operating at fixed frequencies (18 kHz and 38 kHz).Methane seeps in this region are …

Occurrence, Toxicity, And Diversity Of Pseudo-Nitzschia In Florida Coastal Waters, Sheila O'Dea

USF Tampa Graduate Theses and Dissertations

Domoic acid (DA), a potent neurotoxin that has the potential to cause amnesic shellfish poisoning (ASP), is produced by members of the marine diatom genus Pseudo-nitzschia. Outbreaks of ASP in humans and of DA poisoning in birds and marine mammals have been reported across the United States and Canada since the late 1980's. Pseudo-nitzschia species can be extremely abundant in Florida waters, with densities often exceeding 10⁶ cells/L, and sometimes exceeding 10⁷ cells/L. Based on preliminary data, it is evident that at least nine species of Pseudo-nitzschia are found in Florida coastal waters. At least six of …

Mangroves, Mudbanks And Seawalls: Political Ecology Of Adaptation To Sea Level Rise In Suriname, Ravic Nijbroek

USF Tampa Graduate Theses and Dissertations

This study seeks to understand how global discourses of sea level rise (SLR) and mangrove ecology influence national climate change adaptation policy to reduce coastal vulnerability in Suriname. A majority of the Surinamese population lives along the low elevation coastal zone and is highly exposed to projected SLR. Failure by the international community to reach agreement on climate change mitigation means that vulnerable coastal communities must adapt. The Suriname coast is predominantly shaped by mudbanks and mangroves which together provide protection against coastal erosion and trap sediments resulting in coastal accretion. Knowledge claims of mangrove ecology and utility in SLR …

Micronekton And Macrozooplankton Of The Western Antarctic Peninsula And The Eastern Ross Sea: Contrast Between Two Different Thermal Regimes, Melanie Leigh Parker

USF Tampa Graduate Theses and Dissertations

ABSTRACT

Micronekton and macrozooplankton were sampled from the Western Antarctic Peninsula (WAP) and eastern Ross Sea regions. Samples were collected over the course of six research cruises to the Southern Ocean. Four of those cruises were conducted in the Marguerite Bay region of the WAP during the austral fall and winter of 2001 and 2002. A fifth cruise sampled faunal assemblages at nine sites, ranging from Joinville Island at the northern tip of the WAP to Charcot Island near the southern extent of the WAP, during austral fall 2010. A sixth cruise was conducted in the pack ice within the …

On The Spatial And Temporal Variability Of Upwelling In The Southern Caribbean Sea And Its Influence On The Ecology Of Phytoplankton And Of The Spanish Sardine (Sardinella Aurita), Digna Tibisay Rueda-Roa

USF Tampa Graduate Theses and Dissertations

The Southern Caribbean Sea experiences a strong upwelling process along the coast from about 61°W to 75.5°W and 10-13°N. In this dissertation three aspects of this upwelling system are examined: (A) A mid-year secondary upwelling that was previously observed in the southeastern Caribbean Sea between June-July, when land based stations show a decrease in wind speed. The presence and effects of this upwelling along the whole southern Caribbean upwelling system were evaluated, as well as the relative forcing contribution of alongshore winds (Ekman Transport, ET) and wind-curl (Ekman Pumping, EP). (B) Stronger upwelling occurs in two particular regions, namely the …

Shelf-Scale Mapping Of Fish Distribution Using Active And Passive Acoustics, Carrie Christy Wall

USF Tampa Graduate Theses and Dissertations

Fish sound production has been associated with courtship and spawning behavior. Acoustic recordings of fish sounds can be used to identify distribution and behavior. Passive acoustic monitoring (PAM) can record large amounts of acoustic data in a specific area for days to years. These data can be collected in remote locations under potentially unsafe seas throughout a 24-hour period providing datasets unattainable using observer-based methods. However, the instruments must withstand the caustic ocean environment and be retrieved to obtain the recorded data. This can prove difficult due to the risk of PAMs being lost, stolen or damaged, especially in highly …

Sea Surface Height: A Versatile Climate Variable For Investigations Of Decadal Change, Philip Robert Thompson

USF Tampa Graduate Theses and Dissertations

Decadal variations in climate are important, because the magnitude of sustained decadal change is often much larger than the often discussed background trends. Climate variability at interannual and longer periods is most often discussed in the context of climate modes defined by sea level pressure (SLP) and sea surface temperature (SST) patterns. However, SLP and SST are not capable descriptors of ocean dynamics. The approximately two decades of global sea surface height (SSH) measurements from satellite altimetry reveal substantial low-frequency redistributions of heat and salt in the ocean, which may or may not be related to defined climate modes. In …

Thermal Determinants Of Nest Site Selection In Loggerhead Sea Turtles, Caretta Caretta, At Casey Key, Florida, Lindsey Nicole Flynn

USF Tampa Graduate Theses and Dissertations

Many environmental cues are thought to influence nest site selection by loggerhead sea turtles, Caretta caretta, and much debate exists over the possible influence of sand temperature. This study had two primary objectives: (1) to measure thermal differences across transects of a major nesting beach of Casey Key (28.7 N, 82.3 W), Florida and (2) to evaluate thermal pattern variation that influenced nesting patterns of adult female loggerhead sea turtles. A secondary objective of this study was to determine the efficacy of infrared thermometers to collect sand surface temperatures in the field.

Temperature data were collected from 145 nest …

Spatial And Temporal Variability Of Remotely Sensed Ocean Color Parameters In Coral Reef Regions, Daniel Brooks Otis

USF Tampa Graduate Theses and Dissertations

The variability of water-column absorption due to colored dissolved organic matter (CDOM) and phytoplankton in coral reef regions is the focus of this study. Hydrographic and CDOM absorption measurements made on the Bahamas Banks and in Exuma Sound during the spring of 1999 and 2000 showed that values of salinity and CDOM absorption at 440nm were higher on the banks (37.18 psu, 0.06 m^-1), compared to Exuma Sound (37.04 psu, 0.03 m^-1). Spatial patterns of CDOM absorption in Exuma Sound revealed that plumes of CDOM-rich water flow into Exuma Sound from the surrounding banks. To examine absorption variability in reef …

Responses To Chemical Exposure By Foraminifera: Distinguishing Dormancy From Mortality, Benjamin James Ross

USF Tampa Graduate Theses and Dissertations

The Deepwater Horizon blowout in 2010 released an estimated 4.9 million barrels of crude oil into the Gulf of Mexico in the 83 days between the initial explosion and the capping of the well. Response included extensive use of Corexit© oil dispersant. Although South Florida was spared exposure by currents, this event highlights the need for effective bioassay organisms for coral reefs. Amphistegina spp. are benthic foraminifers that host diatom symbionts in a relationship similar to that of coral and their zooxanthellae. Amphistegina spp. occur abundantly in reef communities nearly worldwide, are easily collected and maintained in culture, and are …

Optical Detection And Classification Of Phytoplankton Taxa Through Spectral Analysis, Daniel Tyler Sensi

USF Tampa Graduate Theses and Dissertations

Phytoplankton serve as the bottom of the marine food web and therefore play an essential role in marine ecosystems. On the other hand, coastal phytoplankton communities can adversely affect the marine ecosystem and humans. A variety of techniques have been developed to measure and study phytoplankton, including in situ methods (e.g., flow cytometry) and laboratory methods (e.g., microscopic taxonomy). These provide accurate measurements of phytoplankton taxa and concentrations, yet they are limited in space and time, and synoptic information is difficult to obtain with these techniques.

Optical remote sensing may provide complementary information for its synoptic nature, as demonstrated by …

Survey Of Aquatic Invasive Species In Selected Umpqua National Forest Lakes And Ponds, Mark D. Sytsma, Rich Miller

Center for Lakes and Reservoirs Publications and Presentations

Eleven lakes and ponds within the Umpqua National Forest were surveyed for invasive aquatic macrophytes, snails, bivalves, and crayfish during the summer of 2011. Yellow floating heart (Nymphoides peltata), an invasive floating leaf macrophyte species, was detected in Willow Sump within the Little River drainage. European ear snails (Radix auricularia), an invasive species present in several Umpqua National Forest waterbodies, were detected in Beaver Pond within the Steamboat Creek drainage. One native crayfish species, the signal crayfish (Pacifastacus leniusculus), was observed in Crayfish Lake within the Brice Creek drainage. Diverse assemblages of native plant species were observed in the lakes …

High Resolution Determination Of Nanomolar Concentrations Of Dissolved Reactive Phosphate In Ocean Surface Waters Using Long Path Liquid Waveguide Capillary Cells (Lwcc) And Spectrometric Detection, Louise A. Zimmer, Gregory A. Cutter

OES Faculty Publications

In the last decade, long path length, low volume, liquid waveguide capillary cells (LWCC) in conjunction with conventional nutrient auto-analyzers have been applied to determinations of nanomolar levels of phosphate, nitrate, and nitrite in oligotrophic waters. This article reports a high resolution, real-time, continuous method for nanomolar dissolved reactive phosphate measurements in ocean surface waters with data logging every 30 seconds for up to 16 consecutive hours. Surface seawater is pumped continuously from a shipboard underway tow-fish unit to a helium gas-segmented, continuous-flow, nutrient auto-analyzer modified with a 250 cm LWCC. To circumvent baseline instability due to reagents, a parallel …

Rapid And Noncontaminating Sampling System For Trace Elements In Global Ocean Surveys, Gregory A. Cutter, Kenneth W. Bruland

OES Faculty Publications

A system for the rapid and noncontaminating sampling of trace elements with volumes of up to 36 L per depth and including the dissolved and particulate phases has been developed for ocean sections that are a crucial part of programs such as International GEOTRACES. The system uses commercially available components, including an aluminum Seabird Carousel with all titanium pressure housings for electronics and sensors to eliminate zinc sacrificial anodes and holding twenty-four 12 L GO-FLO bottles, and a 7500 m, 14 mm Vectran conducting cable (passing over an A-frame with nonmetallic sheave) spooled onto a traction winch. The GO-FLO bottles …

Δ13c Is A Signature Of Light Availability And Photosynthesis In Seagrass, Xingping Hu, David J. Burdige, Richard C. Zimmerman

OES Faculty Publications

We explored the role of light-saturated (carbon-limited) photosynthesis on δ¹³C of turtlegrass (Thalassia testudinum Banks ex Konig) populations from the clear, blue waters of the Great Bahama Bank and the turbid, green waters of Florida Bay using field observations and radiative transfer models. Consistent with numerous previous observations, leaf δ¹³C decreased significantly with water depth in both regions. However the δ¹³C for Bahamas turtlegrass was 3 parts per thousand heavier than that for Florida Bay turtlegrass at equivalent depths, and broadband irradiance explained even less of the δ¹³C variations than depth. Instead, leaf δ¹³C showed a stronger relationship to …

Controls On Dissolved Cobalt In Surface Waters Of The Sargasso Sea: Comparisons With Iron And Aluminum, R. U. Shelley, Peter N. Sedwick, T. S. Bibby, P. Cabedo-Sanz, T. M. Church, R. J. Johnson, A. I. Macey, C. M. Marsay, E. R. Sholkovitz, S. J. Ussher, P. J. Worsfold, M. C. Lohan

OES Faculty Publications

Dissolved cobalt (dCo), iron (dFe) and aluminum (dAl) were determined in water column samples along a meridional transect (∼31°N to 24°N) south of Bermuda in June 2008. A general north-to-south increase in surface concentrations of dFe (0.3-1.6 nM) and dAl (14-42 nM) was observed, suggesting that aerosol deposition is a significant source of dFe and dAl, whereas no clear trend was observed. for near-surface dCo concentrations. Shipboard aerosol samples indicate fractional solubility values of 8-100% for aerosol Co, which are significantly higher than corresponding estimates of the solubility of aerosol Fe (0.44-45%). Hydrographic observations and analysis of time series rain …

Introduction To Special Section On Recent Advances In The Study Of Optical Variability In The Near-Surface And Upper Ocean, T. Dickey, M. L. Banner, P. Bhandari, T. Boyd, L. Carvalho, O. Wurl

OES Faculty Publications

Optical variability occurs in the near-surface and upper ocean on very short time and space scales (e.g., milliseconds and millimeters and less) as well as greater scales. This variability is caused by solar, meteorological, and other physical forcing as well as biological and chemical processes that affect optical properties and their distributions, which in turn control the propagation of light across the air-sea interface and within the upper ocean. Recent developments in several technologies and modeling capabilities have enabled the investigation of a variety of fundamental and applied problems related to upper ocean physics, chemistry, and light propagation and utilization …

Novel Lineages Of Prochlorococcus And Synechococcus In The Global Oceans, Sijun Huang, Steven W. Wilhelm, H. Rodger Harvey, Karen Taylor, Nianzhi Jiao, Feng Chen

OES Faculty Publications

Picocyanobacteria represented by Prochlorococcus and Synechococcus have an important role in oceanic carbon fixation and nutrient cycling. In this study, we compared the community composition of picocyanobacteria from diverse marine ecosystems ranging from estuary to open oceans, tropical to polar oceans and surface to deep water, based on the sequences of 16S-23S rRNA internal transcribed spacer (ITS). A total of 1339 ITS sequences recovered from 20 samples unveiled diverse and several previously unknown clades of Prochlorococcus and Synechococcus. Six high-light (HL)-adapted Prochlorococcus clades were identified, among which clade HLVI had not been described previously. Prochlorococcus clades HLIII, HLIV and …

Diversity, Distribution, And Expression Of Diazotroph Nifh Genes In Oxygen-Deficient Waters Of The Arabian Sea, Amal Jayakumar, Mamoon M. D. Al-Rshadat, Bess B. Ward, Margaret R. Mulholland

OES Faculty Publications

The Arabian Sea oxygen minimum zone (OMZ), the largest suboxic region in the world's oceans, is responsible for up to half of the global mesopelagic fixed nitrogen ( N ) loss from the ocean via denitrification and anammox. Dinitrogen (N₂) fixation is usually attributed to cyanobacteria in the surface ocean. Model prediction and physiological inhibition of N₂ fixation by oxygen, however, suggest that N₂ fixation should be enhanced near the oxygen-deficient zone (ODZ) of the Arabian Sea. N₂ fixation and cyanobacterial nifH genes (the gene encoding dinitrogenase reductase) have been reported in surface waters overlying …

Database Of Diazotrophs In Global Ocean: Abundance, Biomass, And Nitrogen Fixation Rates, Y. W. Luo, S. C. Doney, L. A. Anderson, M. Benavides, I. Berman-Frank, A. Bode, S. Bonnet, K. H. Boström, D. Böttjer, D. G. Capone, M. R. Mulholland

OES Faculty Publications

Marine N₂ fixing microorganisms, termed di-azotrophs, are a key functional group in marine pelagic ecosystems. The biological fixation of dinitrogen (N₂) to bioavailable nitrogen provides an important new source of nitrogen for pelagic marine ecosystems and influences primary productivity and organic matter export to the deep ocean. As one of a series of efforts to collect biomass and rates specific to different phytoplankton functional groups, we have constructed a database on diazotrophic organisms in the global pelagic upper ocean by compiling about 12 000 direct field measurements of cyanobacterial diazotroph abundances (based on microscopic cell counts or …

The Role Of Larval Dispersal In Metapopulation Gene Flow: Local Population Dynamics Matter, Daphne M. Munroe, John M. Klinck, Eileen E. Hofmann, Eric N. Powell

OES Faculty Publications

The degree of genetic connectivity among populations in a metapopulation has direct consequences for species evolution, development of disease resistance, and capacity of a metapopulation to adapt to climate change. This study used a metapopulation model that integrates population dynamics, dispersal, and genetics within an individual-based model framework to examine the mechanisms and dynamics of genetic connectivity within a metapopulation. The model was parameterized to simulate four populations of oysters (Crassostrea virginica) from Delaware Bay on the mid-Atlantic coast of the United States. Differences among the four populations include a strong spatial gradient in mortality, a spatial gradient …

Impact Of Abrupt Deglacial Climate Change On Tropical Atlantic Subsurface Temperatures, Matthew W. Schmidt, Ping Chang, Jennifer E. Hertzberg, Theodore R. Them Ii, Link Li, Bette L. Otto-Bliesner

OES Faculty Publications

Both instrumental data analyses and coupled ocean-atmosphere models indicate that Atlantic meridional overturning circulation (AMOC) variability is tightly linked to abrupt tropical North Atlantic (TNA) climate change through both atmospheric and oceanic processes. Although a slowdown of AMOC results in an atmospheric-induced surface cooling in the entire TNA, the subsurface experiences an even larger warming because of rapid reorganizations of ocean circulation patterns at intermediate water depths. Here, we reconstruct high-resolution temperature records using oxygen isotope values and Mg/Ca ratios in both surface- and sub-thermocline-dwelling planktonic foraminifera from a sediment core located in the TNA over the last 22 ky. …

Deglacial Variability Of Antarctic Intermediate Water Penetration Into The North Atlantic From Authigenic Neodymium Isotope Ratios, Ruifang C. Xie, Franco Marcantonio, Matthew W. Schmidt

OES Faculty Publications

Understanding intermediate water circulation across the last deglacial is critical in assessing the role of oceanic heat transport associated with Atlantic Meridional Overturning Circulation variability across abrupt climate events. However, the links between intermediate water circulation and abrupt climate events such as the Younger Dryas (YD) and Heinrich Event 1 (H1) are still poorly constrained. Here, we reconstruct changes in Antarctic Intermediate Water (AAIW) circulation in the subtropical North Atlantic over the past 25 kyr by measuring authigenic neodymium isotope ratios in sediments from two sites in the Florida Straits. Our authigenic Nd isotope records suggest that there was little …

Solar Forcing Of Florida Straits Surface Salinity During The Early Holocene, Matthew W. Schmidt, William A. Weinlein, Franco Marcantonio, Jean Lynch-Stieglitz

OES Faculty Publications

Previous studies showed that sea surface salinity (SSS) in the Florida Straits as well as Florida Current transport covaried with changes in North Atlantic climate over the past two millennia. However, little is known about earlier Holocene hydrographic variability in the Florida Straits. Here, we combine Mg/Ca-paleothermometry and stable oxygen isotope measurements on the planktonic foraminifera Globigerinoides ruber (white variety) from Florida Straits sediment core KNR166-2 JPC 51 (24° 24.70' N, 83° 13.14' W, 198 m deep) to reconstruct a high-resolution (~25 yr/sample) early to mid Holocene record of sea surface temperature and δ¹⁸O_SW)(a …

Recent Changes In The Growth And Nutrient Limitation Of Benthic And Pelagic Algae In Arctic Tundra Ponds, Christina Hernandez

Open Access Theses & Dissertations

Arctic ponds are a dominant feature in Barrow, Alaska. Ponds may function as carbon sinks during the growing season from production of photosynthetic organisms like algae; however, little work has been done on this topic. Environmental changes have been occurring in the Arctic stemming from climate change and human perturbations. The focus of this study was to assess a historically studied region for changes in algal primary production that may have been produced due to increases in temperature over the past 40 years and increased human development. Additionally, this study aimed to determine nutrient limitation of algal production in the …

High-Order Central Finite-Volume Schemes For Atmospheric Modeling, Kiran Kumar Katta

Open Access Theses & Dissertations

Atmospheric numerical modeling has been going through drastic changes over the past decade, mainly to utilize the massive computing capability of the petascale systems. This obliges the modelers to develop grid systems and numerical algorithms that facilitate exceptional level of scalability on these systems. The numerical algorithms that can address these challenges should have the local properties such as the high on-processor operation count and minimum parallel communication i.e., high parallel efficiency. They should also satisfy the following properties such as inherent local and global conservation, high-order accuracy, geometric flexibility, non-oscillatory advection and positivity preservation properties. The goal of this …

Implications Of Decade Time Scale Arctic Plant Community Change On Ecosystem Function, Mark Jason Lara

Open Access Theses & Dissertations

Almost half the global soil organic carbon pool is found in northern high latitudes. The majority of this soil carbon is stored in a greenhouse inert state within permafrost. As pronounced warming of high northern latitudes ensues, there is a strong likelihood that this substantial soil organic carbon pool will be mobilized to the atmosphere where it is likely to positively enhance greenhouse warming. Modeling studies suggest this positive feedback could alter future climate states of the Arctic and the globe, and affect how humans may need to adapt to climate change. Accordingly, understanding the patterns and controls and the …