Biochemical and Biomolecular Engineering Commons^™

Development Of Multimodal Membrane Adsorbers For Antibody Purification Using Atom Transfer Radical Polymerization, Juan Wang, Scott M. Husson

Graduate Research and Discovery Symposium (GRADS)

No abstract provided.

Template Free-Synthesis Of Polypyrrole Microtubes For Supercapacitor Electrodes, Kryssia P. Diaz, Mark E. Roberts

Graduate Research and Discovery Symposium (GRADS)

The purpose of this work is to develop a simple, scalable and template-free method to synthesize conducting polymer nano/micro-structures for supercapacitor electrodes. The microstructure and electrochemical properties of structure polypyrrole on various mesh substrates is investigated.

Development And Utilization Of A Pair Of Sol-Gel Entrapped Lipases For Biodiesel Production From High Free Fatty Acid Oils, Cory M. Schwartz

Department of Chemical and Biomolecular Engineering: Theses and Student Research

Biodiesel, which consists of fatty acid alkyl esters, is one of the most widely adopted and successful renewable fuels. Traditional physiochemical biodiesel production methods require high cost refined feedstocks, and so alternative methods of catalysis and feedstocks have been explored. This research investigated the use of polysiloxane entrapped lipases to catalyze the production of biodiesel from low cost feedstocks.

In this work, lipase from Burkholderia cepacia (lipase PS) and lipase B from Candida antarctica (CalB) were separately entrapped using sol-gel chemistry. Optimal reaction conditions for the esterification of free fatty acids by immobilized CalB with methanol were determined. Immobilized CalB …

2014 Chemical And Biomolecular Graduate Research Symposium Program, Clemson University

Chemical and Biomolecular Graduate Research Symposium

Program for the 2014 Graduate Research Symposium in Holmes Ballroom - Clemson House.

Multiphase Hydrodynamics And Distribution Characteristics In A Monolith Bed Measured By Optical Fiber Probe, Yuan Zhou, Milorad P. Dudukovic, Muthanna H. Al-Dahhan, Hui Liu

Chemical and Biochemical Engineering Faculty Research & Creative Works

The Optical Fiber Probe Has Been for the First Time Applied to Investigate the Hydrodynamics and Gas-Phase Distribution at High Gas/liquid Ratios in a Two-Phase Flow Monolith Bed with 0.048 M Diameter and 400 Cpsi. Local Hydrodynamic Parameters Including Gas Holdup, Bubble Frequency, Bubble Velocity, and Bubble Length in Single Channels Were Measured by 16 Inserted Single-Point Optical Fiber Probes within the Bed under a Nozzle as the Liquid Distributor. the Following Findings Are Reported. (1) the Optical Fiber Probe Can Be Used as an Efficient and Convenient Technique for Measuring Local Hydrodynamic Parameters Inside the Channels of a Monolith …

Surface Functionalization And Bioconjugation Of Nanoparticles For Biomedical Applications, Longyan Chen

Electronic Thesis and Dissertation Repository

Colloidal inorganic nanoparticles (NPs) have been attracting considerable interest in biomedicine, from drug and gene delivery to imaging, sensing and diagnostics. It is essential to modify the surface of nanoparticles to have enhanced biocompatibility and functionality for the in vitro and in vivo applications, especially in delivering locally and recognizing biomolecules. Herein, the goal of this research work is to develop advanced NPs with well-tailored surface functionalities and/or bio-functionality for the applications in cell tracking and analytes detection.

In the first project, quantum dots incorporating with gelatin nanoparticles (QDs-GNPs) have been developed for bioimaging applications. Two different approaches have been …

Information In Biological Systems And The Fluctuation Theorem, Yaşar Demirel

Department of Chemical and Biomolecular Engineering: Faculty Publications

Some critical trends in information theory, its role in living systems and utilization in fluctuation theory are discussed. The mutual information of thermodynamic coupling is incorporated into the generalized fluctuation theorem by using information theory and nonequilibrium thermodynamics. Thermodynamically coupled dissipative structures in living systems are capable of degrading more energy, and processing complex information through developmental and environmental constraints. The generalized fluctuation theorem can quantify the hysteresis observed in the amount of the irreversible work in nonequilibrium regimes in the presence of information and thermodynamic coupling.

Synthesis Of Nano-Sized Materials Using Atomic Layer Deposition, Sara Grace Simpson

Summer Community of Scholars Posters (RCEU and HCR Combined Programs)

No abstract provided.

Complex Logic Functions Implemented With Quantum Dot Bionanophotonic Circuits, Jonathan C. Claussen, Niko Hildebrandt, Kimihiro Susumu, Mario G. Ancona, Igor L. Medintz

Jonathan C. Claussen

We combine quantum dots (QDs) with long-lifetime terbium complexes (Tb), a near-IR Alexa Fluor dye (A647), and self-assembling peptides to demonstrate combinatorial and sequential bionanophotonic logic devices that function by time-gated Förster resonance energy transfer (FRET). Upon excitation, the Tb-QD-A647 FRET-complex produces time-dependent photoluminescent signatures from multi-FRET pathways enabled by the capacitor-like behavior of the Tb. The unique photoluminescent signatures are manipulated by ratiometrically varying dye/Tb inputs and collection time. Fluorescent output is converted into Boolean logic states to create complex arithmetic circuits including the half-adder/half-subtractor, 2:1 multiplexer/1:2 demultiplexer, and a 3-digit, 16-combination keypad lock.

Exploiting Issatchenkia Orientalis Sd108 For Succinic Acid Production, Han Xiao, Zengyi Shao, Yu Jiang, Sudhanshu Dole, Huimin Zhao

Zengyi Shao

Background: Recent advances in synthesizing valuable chemicals such as organic acids from low-cost renewable biomass through microbial fermentation have attracted great attention. However, the toxicity of organic acids presents a key challenge to the development of an economically viable fermentation process. Therefore, a platform organism that not only produces organic acids but also tolerates the associated toxicity is highly desirable. Results: Here we report the discovery, characterization, and engineering of a yeast strain, Issatchenkia orientalis SD108, that is tolerant to low pH and high concentration of organic acids. This strain demonstrated a higher tolerance compared to I. orientalis ATCC 24210 …

Nanomaterial-Mediated Biosensors For Monitoring Glucose, Eric S. Mclamore, Masashige Taguchi, Andre Ptitsyn, Jonathan C. Claussen

Jonathan C. Claussen

Real-time monitoring of physiological glucose transport is crucial for gaining new understanding of diabetes. Many techniques and equipment currently exist for measuring glucose, but these techniques are limited by complexity of the measurement, requirement of bulky equipment, and low temporal/spatial resolution. The development of various types of biosensors (eg, electrochemical, optical sensors) for laboratory and/or clinical applications will provide new insights into the cause(s) and possible treatments of diabetes. State-of-the-art biosensors are improved by incorporating catalytic nanomaterials such as carbon nanotubes, graphene, electrospun nanofibers, and quantum dots. These nanomaterials greatly enhance biosensor performance, namely sensitivity, response time, and limit of …

Quartz Crystal Microbalance Investigation Of Cellulosome Activity From Clostridium Thermocellum On Model Cellulose Films, Shanshan Zhou

Theses and Dissertations--Chemical and Materials Engineering

The cost of deconstructing cellulose into soluble sugars is a key impediment to the commercial production of lignocellulosic biofuels. The use of the quartz crystal microbalance (QCM) to investigate reaction variables critical to enzymatic cellulose hydrolysis is investigated here, extending previous studies of fungal cellulase activity for the first time to whole cell cellulases. Specifically, the activity of the cellulases of Clostridium thermocellum, which are in the form of cellulosomes, was investigated. To clearly differentiate the activity of free cellulosome and cell-bound cellulosome, the distribution of free cellulosome and cell-bound cellulosome in crude cell broth at different growth stages …

Developing Genetic Tools For Geobacillus, Brittany Artale

Honors Theses and Capstones

Bacillus and Geobacillus are the primary bacterium used in biotechnology industries due to their ability to excrete extracellular materials such as proteins, enzymes and other byproducts. Bacillus subtilis, has a well-characterized competence machinery, giving way to characterized genetic tools. However, a significant problem associated with working with Bacillus is the regulation of endospore formation. An alternative to Bacillus is Geobacillus, a thermophilic bacterium. Thermophiles offer significant advantages over other bacteria as host organisms in biofuel, bioremediation, and biocatalyst processes. However, the genetic tools and competency associated with Geobacillus is still unknown. Through, genetic engineering the ability …

Degradable Borate Glass Polyalkenoate Cements, L. Shen, A. Coughlan, Mark R. Towler, M. Hall

Chemical and Biochemical Engineering Faculty Research & Creative Works

Glass polyalkenoate cements (GPCs) containing aluminum-free borate glasses having the general composition Ag₂O-Na₂O-CaO-SrO-ZnO- TiO₂-B₂O₃ were evaluated in this work. An initial screening study of sixteen compositions was used to identify regions of glass formation and cement compositions with promising rheological properties. The results of the screening study were used to develop four model borate glass compositions for further study. A second round of rheological experiments was used to identify a preferred GPC formulation for each model glass composition. The model borate glasses containing higher levels of TiO₂ (7.5 mol %) …

One-Step Production Of Long-Chain Hydrocarbons From Waste-Biomass-Derived Chemicals Using Bi-Functional Heterogeneous Catalysts, Cun Wen, Elizabeth A. Barrow, Jason R. Hattrick-Simpers, Jochen A. Lauterbach

Faculty Publications

n this study, we demonstrate the production of long-chain hydrocarbons (C₈₊) from 2-methylfuran (2MF) and butanal in a single step reactive process by utilizing a bi-functional catalyst with both acid and metallic sites. Our approach utilizes a solid acid for the hydroalkylation function and as a support as well as a transition metal as hydrodeoxygenation catalyst. A series of solid acids was screened, among which MCM-41 demonstrated the best combination of activity and stability. Platinum nanoparticles were then incorporated into the MCM-41. The Pt/MCM-41 catalyst showed 96% yield for C₈₊ hydrocarbons and the catalytic performance was stable …

Investigating The Effect Of Sio2-Tio2-Cao-Na 2o-Zno Bioactive Glass Doped Hydroxyapatite: Characterisation And Structural Evaluation, Chokchai Yatongchai, Anthony W. Wren, Declan J. Curran, Stuart Hampshire, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

The effects of increasing bioactive glass additions,

SiO₂-TiO₂-CaO-Na₂O-ZnO up to 25 wt% in increments of 5 wt%, on the physical and mechanical properties of hydroxyapatite (HA) sintered at 900, 1000, 1100 and 1200°C for 2 h was investigated. Increasing both the glass content and the temperature resulted in increased HA decomposition. This resulted in the formation of a number of bioactive phases. However the presence of the liquidus glass phase did not result in increased densification levels. At 1000 and 1100°C the additions of 5 wt% glass resulted in a decrease in density which …

Information In Biological Systems And The Fluctuation Theorem, Yasar Demirel

YASAR DEMIREL

Some critical trends in information theory, its role in living systems and utilization in fluctuation theory are discussed. The mutual information of thermodynamic coupling is incorporated into the generalized fluctuation theorem by using information theory and nonequilibrium thermodynamics. Thermodynamically coupled dissipative structures in living systems are capable of degrading more energy, and processing complex information through developmental and environmental constraints. The generalized fluctuation theorem can quantify the hysteresis observed in the amount of the irreversible work in nonequilibrium regimes in the presence of information and thermodynamic coupling.

Analytical Methods For The Selected Properties Determination Of 3-Hydroxypropionaldehyde (Hpa), Chuen-Tat Kang

Kang Chuen Tat (江俊达)

3-hydroxypropionaldehyde (3-HPA) is an intermediate metabolite of glycerol metabolism towards the formation of 1,3-propanediol. Voisenet (1910) in fact has observed this substance and its formation from glycerol during bacterial spoilage of wine. Being one of the antibiotics and precursors for high quality plastics, unfortunately there are still no complete set of analytical data available for this substance. From the experimental data from this paper, NMR analysis using 2-H showed that –CHO bond of aldehyde observed at δ9.5, RCH-3 at δ1.37, R-2 CH-2 at δ3.68, R-3 CH at δ1.9 and so on. The carbon-13 NMR spectrum showed six signals, at chemical …

Effects Of Biodiesel Concentration On Microbial Deterioration Of Polyethylene In A Simulated Fuel Storage Tank, Juan Manuel Restrepo-Florez

Electronic Thesis and Dissertation Repository

In this study a simulated fuel storage tank was used to investigate the effect of biodiesel concentration on biodegradation of polyethylene. This research is relevant in the field of fuel storage. The simulated storage system consisted of a number of identical conical flasks. Each flask was comprised of two layers, an upper one consisting of a fuel blend of diesel with biodiesel in concentrations ranging from 0 to 100% of biodiesel and the bottom layer containing an aqueous mineral media inoculated with a community obtained from a real fuel storage facility. Polyethylene slabs cut to a specific size were immersed …

Characteristics Of Glass Ionomer Cements Composed Of Glass Powders In Cao-Sro-Zno-Sio2 System Prepared By Two Different Synthetic Routes, Ill Yong Kim, Chikara Ohtsuki, Aisling Coughlan, Lana Placek, Anthony W. Wren, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Glass ionomer cements (GICs) are composed of an acid degradable glass, polyacrylic acid and water. Sol-gel processing to prepare the glass phase has certain advantages, such as the ability to employ lower synthesis temperatures than melt quenching and glasses that are reported to have higher purity. A previous study reported the effects of glass synthesis route on GIC fabrication. However, in that study, the sol-gel derived glass exhibited a reduced concentration of cations. This study investigates increasing the cation content of a sol-gel derived glass, 12CaO·4SrO·36ZnO·48SiO₂ (molar ratio) by heating before aging to reduce dissolution of cations. This glass …