Biomedical Engineering and Bioengineering Commons^™

A Liver-Kidney Biosubsystem, Brian J. Budnik

Bioengineering Dissertations - Archive

Each year many patients die waiting for a transplant organ to become available. Increasing the available number of transplant organs would save lives. The donor pool could be expanded if organs which are considered to be of uncertain viability could be utilized for transplantation. Currently, when there is any doubt about the viability of the organ, it is discarded. This occurs because there has been no way to confirm its viability other than to transplant it and risk the life of the recipient. Thus, many organs that are in fact good are wasted. Some might not be fully viable but …

Development Of Cancer Trap For Capturing Cancer Cells That Metastasize In The Peritoneal Cavity: A Preliminary Study, Chuka I. Okpokwasili

Bioengineering Theses - Archive

Our laboratory has recently developed an implantable device - cancer trap that can recruit and trap circulating cancer cells inside the bloodstream. Since several types of cancer cells can metastasize inside the peritoneal cavity, this study explores the possibility of using cancer traps to recruit esophageal and prostate cancer cells inside the peritoneum. Using prostate cancer and esophageal cancer cells as model cancers, this thesis shows that cancer traps can capture cancer cells inside the peritoneal space. EPO releasing traps was also shown to reduce the spread of prostate cancer as well as esophageal cancer compared to controls. Using multiple …

Blood-Brain Barrier-On-A-Chip Systems Based On 3d Printing, Cade I. Harding

Mechanical Engineering Undergraduate Honors Theses

This research focused on the design and testing of a blood-brain barrier (BBB)-on-a-chip microfluidic device produced using 3D printing. First, COMSOL simulations were used to define dimensions of the microchannel that would most accurately replicate the flow environment imposed on the blood-brain barrier, the wall shear stress being the most important characteristic. In using COMSOL, water was used as the simulated fluid and also the testing fluid in the fabricated devices. Therefore, the microsystem is designed to produce the BBB environment using water instead of blood. The numerical simulation parameters were based on theoretical calculations performed to scale up the …

T-Cell Membrane Camouflaged Nanoparticles For Treatment Of Melanoma, Gizem Oter

Bioengineering Theses - Archive

Melanoma is one of the most aggressive skin cancers. The American Cancer Society reports that every hour, one person dies from melanoma. While there are a number of treatments currently available for melanoma (e.g. surgery, chemotherapy, immunotherapy, radiation therapy), these therapies face several problems, including inadequate response rates, high toxicity, and severe side effects due to non-specific delivery of anti-cancer drugs. To improve therapeutic efficiency and reduce these limitations, a multifunctional nanoparticle has been developed. Specifically, poly (lactic-co-glycolic acid) (PLGA) nanoparticles (NPs) were coated with a cellular membrane derived from the T cell hybridoma, 19LF6 endowed with a melanoma-specific anti-gp100/ …

Pairing Of Anaerobic And Aerobic Treatment Of Petroleum Wastewater, Zachary Fica

Undergraduate Honors Capstone Projects

The objective of this project was to treat petroleum refinery wastewater using a combination of anaerobic and aerobic processes, namely an Up-flow Anaerobic Sludge Blanket (UASB) reactor paired with a Rotation Algae Biofilm Reactor (RABR), respectively, to produce a treated effluent. The treatment method developed needed to produce a cost-effective and efficient way to decrease nitrogen, phosphorous, total suspended solids (TSS), and COD concentrations to below State of Utah limitations. It was demonstrated that RABR treatment was capable of reducing effluent concentrations of nitrogen, phosphorus, and TSS to State of Utah limitations. RABR treatment did not significantly reduce COD from …

Examining The Effects Of Macrophage Populations On Cancerous Tumor Growth., Grace E. Mahlbacher

Electronic Theses and Dissertations

The most abundant immune cell types of the tumor microenvironment macrophages recruited there by tumor-eluted factors. The role of these immune cells in tumor progression, and the interplay between tumor and immune cells is an emerging field of research with potential for novel treatment strategies. Here, a TIE2 expressing macrophage (TEM) subtype is integrated into a virtual tumor model. Within the 2D microenvironment, the TEM will differentiate from an extravasated monocyte precursor, congregate around the abluminal side of the vasculature in response to a chemoattractant gradient, secrete cytokines which favor differentiation of a separate angiogenic macrophage subtype [1]. The effects …

A Novel Mra-Based Framework For The Detection Of Changes In Cerebrovascular Blood Pressure., Yitzhak Atakilt Gebru

Electronic Theses and Dissertations

Background: High blood pressure (HBP) affects 75 million adults and is the primary or contributing cause of mortality in 410,000 adults each year in the United States. Chronic HBP leads to cerebrovascular changes and is a significant contributor for strokes, dementia, and cognitive impairment. Non-invasive measurement of changes in cerebral vasculature and blood pressure (BP) may enable physicians to optimally treat HBP patients. This manuscript describes a method to non-invasively quantify changes in cerebral vasculature and BP using Magnetic Resonance Angiography (MRA) imaging.

Methods: MRA images and BP measurements were obtained from patients (n=15, M=8, F=7, Age= 49.2 …

Optical Imaging Of Metabolic Adaptability As A Biomarker For Metastatic Potential In Breast Cancer Cells, Mason G. Harper

Biomedical Engineering Undergraduate Honors Theses

Breast cancer metastasis is the main cause for mortality in breast cancer patients. However, knowledge of metastatic recurrence is limited, and there is a need to understand metastatic recurrence in order to treat breast cancer patients more effectively. Highly invasive metastatic breast cancer has shown to exhibit metabolic adaptability, transitioning from glycolysis to oxidative phosphorylation in the presence of microenvironmental stress. NADH and FAD are naturally occurring cofactor products during glycolysis and oxidative phosphorylation, respectively, and they are of particular importance during these metabolic processes due to their endogenous fluorescence. Measuring the ratio of fluorescence intensities of these cofactors through …

Age's Effect On Regenerative Capabilities Of Myocytes Through Satellite Cell Analysis, Karam S. Sra

Biomedical Engineering Undergraduate Honors Theses

The objective of this study was to investigate potential effects aging had on muscle fiber area and satellite cell count in myocytes. This research could help elucidate the detrimental effect age has on regenerative capabilities whether in terms of satellite cell function or satellite cell number. Satellite cells are primarily responsible for generating new muscle tissue after being activated through mechanotransduction of injury. This study utilized immunofluorescence to examine the presence of the PAX7 gene expression, a unique marker of satellite cells, within a 12 month and 18 month old population of mice. The PAX7 marker was co-stained with DAPI …

Target-Specific Capture Of Relevant Gaseous Compounds Using Natural And Synthetic Nano And Micro Materials, Fernanda Delbuque Guerra

All Dissertations

By definition, volatile organic compounds (VOCs) are organic compounds that easily become vapor or gases. Many VOCs are hazardous air pollutants and often known for their low, often unpleasant, threshold odor, which can be below parts per billion in some cases. Nanotechnology-based materials for the remediation of gaseous pollutants has been the focus of many researchers due to their unique chemical and physical properties and enhanced reactivity when compared to bulkier materials. Among the many challenges preventing the global use of nanomaterials are the high costs of fabrication, on-site recovery, limited scale-up, potential toxicity since many of them rely on …

Detection Of Leukocytes Stained With Acridine Orange Using Unique Spectral Features Acquired From An Image-Based Spectrometer, Courtney J. Hunter

Biomedical Engineering Undergraduate Honors Theses

A leukocyte differential count can be used to diagnosis a myriad blood disorders, such as infections, allergies, and efficacy of disease treatments. In recent years, attention has been focused on developing point-of-care (POC) systems to provide this test in global health settings. Acridine orange (AO) is an amphipathic, vital dye that intercalates leukocyte nucleic acids and acidic vesicles. It has been utilized by POC systems to identify the three main leukocyte subtypes: granulocytes, monocytes, and lymphocytes. Subtypes of leukocytes can be characterized using a fluorescence microscope, where the AO has a 450 nm excitation wavelength and has two peak emission …

Characterization Of The Response Of Trpv4 To Chemical Stimulation, Jacob V. Schluns

Biomedical Engineering Undergraduate Honors Theses

Traumatic Brain Injury (TBI) is a source of acute and chronic health issues for many patients. One of the components of the brain’s response to injury is astrogliosis, in which astrocytes that normally function to repair the brain instead form scar tissue that halts repair processes. Transient Receptor Potential Vanilloid Type 4 (TRPV4) is a trans-membrane calcium channel involved in astrogliosis. Through Fura-2AM based calcium imaging, the base activity of this channel in mouse astrocyte cells was recorded. The cells were then subjected to TRPV4 agonist and antagonist stimulation and their subsequent activity levels were recorded. The data showed that …

Development Of Peritoneal Microbubble Oxygenation As An Extrapulmonary Treatment For Hypoxia, Nathan Legband

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

Patients affected by a respiratory disease or injury experience a substantially impaired respiratory system and as a consequence are unable to obtain a sufficient amount of oxygen. Hypoxia can quickly result in developing permanent tissue damage or death. Currently, the medical methods of treating hypoxia are mechanical ventilation or extracorporeal membrane oxygenation. However, these treatments are ineffective in certain cases and possess significant additional risks including barotrauma, infection, hemorrhage, and thrombosis.

The extrapulmonary method of peritoneal oxygenation has been investigated by other research groups as a potential alternative to providing supplemental oxygen in hypoxic animals. In peritoneal oxygenation, the peritoneum, …

Design And Validation Of An In Vivo Long-Term Attachment Capsule Robot, Wanchuan Xie

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

The invention of capsule endoscopy (CE) made the non-invasive monitoring of the entire small bowel possible and became the primary means for diagnosing small bowel pathology. In the last decade, capsule robots have been transformed from diagnostic devices into a widely studied biomedical platform with the potential for active locomotion, drug delivery and therapeutic capabilities. To perform accurate on-site drug release and therapy, it is necessary for a capsule robot to be able to attach to the intestinal tissue and maintain its position long-term. Design challenges derive from the task of long-term mucosal adhesion which requires firm, quick-response attachment without …

Optimizing A Standard Fasting Time For 2-Nbdg Uptake Studies In Murine Breast Cancers, Andrew C. Briley

Biomedical Engineering Undergraduate Honors Theses

Recently, there has been a larger use of 2-NBDG, a fluorescent glucose analog, to study glucose uptake in different cell types. These cell types have ranged anywhere from bacteria to human cancer cells. However, there has yet to be a standard procedure and practice for using 2-NBDG. In this study, our goal is to create a standard fasting time for the cells before introducing 2-NBDG to them. This study uses 4T07 cells, a murine breast cancer cell line, to help optimize this fasting time. These cells were fasted at different time points in order to find the ideal fasting time. …

Effect Of Storage Temperature And Time On Lyophilized Water Bark Extract's Biological Activity, Jillian Schneider

Biological and Agricultural Engineering Undergraduate Honors Theses

Sweetgum bark extract has been known to show biological activities such as antimicrobial and antioxidant capabilities. The storage capacity of the extract, however, was unknown and previously thought to diminish over time. However, upon experimentation, the freeze-dried sweetgum bark extract showed no signs that storage time or storage temperature had any significant effect on the biological activities. There was no significant difference across storage temperature over time in the experiment (ANOVA RM, P0.05). Therefore, the antioxidant capabilities of the sweetgum extract were not affected by the storage time or temperature treatments studied in this work. For the antimicrobial experiment, there …

Unravelling The Mysteries Of Cognitive Decline In Cancer Survivors Using Functional Near Infrared Spectroscopy, Dhivya Srinivasan

Bioengineering Theses - Archive

In recent years, there has been an increased incidence of cognitive impairment in cancer survivors as a side-effect of chemotherapy. This troubling deterioration in cognitive ability is commonly termed as 'Chemo brain' in which patients have problems with working memory, executive function, decision-making, concentration, visuospatial skills and attention which can pose problems to get on with day-to-day life. Breast Cancer is primarily adopted as the model for studying effects of 'chemobrain'. A better understanding of neural correlates & hemodynamic changes related to cognitive deficits would help clinicians to design targeted treatments and cognitive rehabilitation interventions. Aim: The primary goal of …

Design And Development Of Real-Time Single And Dual-Wavelength Dcs Systems To Study Skeletal Muscle Blood Perfusion And Oxygen Metabolism, Chandan Ganesh Bangalore Yogananda

Bioengineering Theses - Archive

The aim of this study was to utilize Diffused Correlation Spectroscopy (DCS) to design and develop real-time single and dual wavelength systems and assess the physiological impacts of exercises on blood perfusion. The study consisted of 4 parts. Part 1 was to Re-design and develop a real-time single wavelength DCS system, part 2 was to validate this system by a cross validation method with the help of a concurrent study alongside Doppler ultrasound. Part 3 was to design & develop a real-time dual wavelength DCS system and part 4 was to validate the dual wavelength DCS system. DCS is a …

Light Reflectance Spectroscopy For The Detection Of Positive Surgical Margin Of Prostate Cancer, Henry Thek Chan

Bioengineering Theses - Archive

During a radical prostatectomy in the operating room, there exists a certain degree of risks of a surgical positive margin of prostate cancer. Positive surgical margins are defined as cancer that has spread beyond the margin of the prostate and into the surrounding tissues. Surgeons will be able to utilized the concept of Light Reflectance Spectroscopy (LRS) in real-time during surgery to help detect these positive surgical margins and to provide the surgeon a quantitative decision to remove the excess surrounding tissues. This modality would essentially lower the risks of positive surgical margins and prevent the recurrence of cancer, effectively …

The Biomechanics Of Music Performance, Rachel F. Bellisle, Jessika Decker

Senior Honors Projects

When first learning to play a wind instrument, beginner musicians are taught how to hold their instrument and correctly position their body. They are taught how to sit, where to put their hands and fingers on the keys, and how to hold their arms. This initial lesson on posture and hand positioning is often short, as one quickly moves on to learn the embouchure and breathing techniques that allow sound to be produced. As a musician progresses in skill, positioning is emphasized more, and they learn that it can affect their risk of strain or injury and improve their sound …