Biomedical Engineering and Bioengineering Commons^™

The Specific Vulnerabilities Of Cancer Cells To The Cold Atmospheric Plasma-Stimulated Solutions., Dayun Yan, Haitao Cui, Wei Zhu, Niki Nourmohammadi, Julian Milberg, Lijie G Zhang, Jonathan H Sherman, Michael Keidar

Neurological Surgery Faculty Publications

Cold atmospheric plasma (CAP), a novel promising anti-cancer modality, has shown its selective anti-cancer capacity on dozens of cancer cell lines in vitro and on subcutaneous xenograft tumors in mice. Over the past five years, the CAP-stimulated solutions (PSS) have also shown their selective anti-cancer effect over different cancers in vitro and in vivo. The solutions used to make PSS include several bio-adaptable solutions, mainly cell culture medium and simple buffered solutions. Both the CAP-stimulated medium (PSM) and the CAP-stimulated buffered solution (PSB) are able to significantly kill cancer cells in vitro. In this study, we systematically compared the anti-cancer …

Quantitative Optical Measurement Of Mitochondrial Superoxide Dynamics In Pulmonary Artery Endothelial Cells, Zahra Ghanian, Girija G. Konduri, Said H. Audi, Amadou K.S. Camara, Mahsa Ranji

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Characterization Of Surface Charges And Compensating Charges For Gene Delivery To Tissue, Ravi Shanmugha Preethi Vangapattu

USF Tampa Graduate Theses and Dissertations

Ever since the discovery of DNA, there has been many pathologies identified effecting mankind. With the development in technology, there are many methods to alleviate these pathologies. One such is gene therapy or gene delivery. It is a process of introducing some foreign material into the body to correct the effected cells. In principle, it is a modern method to cure cells or a method to transfer nucleic acid into a cell to treat specific cells in the body. The process of delivering a genetic material is carried out using vectors, namely, viral vectors and non-viral vectors. In viral vectors, …

Impaired Right Ventricular Contractile Function In Childhood Obesity And Its Association With Right And Left Ventricular Changes: A Cine Dense Cardiac Magnetic Resonance Study, Linyuan Jing, Arichanah Pulenthiran, Christopher D. Nevius, Abba Mejia-Spiegeler, Jonathan D. Suever, Gregory J. Wehner, H. Lester Kirchner, Christopher M. Haggerty, Brandon K. Fornwalt

Biomedical Engineering Faculty Publications

Background: Pediatric obesity is a growing public health problem, which is associated with increased risk of cardiovascular disease and premature death. Left ventricular (LV) remodeling (increased myocardial mass and thickness) and contractile dysfunction (impaired longitudinal strain) have been documented in obese children, but little attention has been paid to the right ventricle (RV). We hypothesized that obese/overweight children would have evidence of RV remodeling and contractile dysfunction.

Methods: One hundred and three children, ages 8–18 years, were prospectively recruited and underwent cardiovascular magnetic resonance (CMR), including both standard cine imaging and displacement encoding with stimulated echoes (DENSE) imaging, which allowed …

Effects Of Short Term Hypoxia-Preconditioning On Glial Phenotype Induction Of Human Mesenchymal Stem Cells, Zichen Qian, Qi Xing, Corey Fase, Kyle Jansen, Feng Zhao

Michigan Tech Publications, Part 1

Development of successful clinical treatments for peripheral nerve injury is limited due to the complications behind neural physiology. Human mesenchymal stem cells (hMSCs) have the ability to directly promote tissue repair and protect cells at the injury site. Studies have shown that hMSCs can be transplanted to improve nerve regeneration. Hypoxic culture condition has been proven to maintain the stemness of hMSCs for later differentiation. In this study, we investigated the effects of low oxygen (O₂) (2% and 5% O₂) pre-treatment and initial seeding density (500, 1000, and 2000 cells/cm²) on glial protein expression …

A Wood-Powered Lawn Mower: Separating The Rules Of Thumb From Engineering Design, William White

Mahurin Honors College Capstone Experience/Thesis Projects

Biomass gasification, the thermal process of exracting combustible gasses from organic matter, is an established procedure that has been used for many years to provide fuel in various applications. It is a potential source of renewable fuel and has proven useful as a crisis energy source. This thesis investigates the primary engineering science principles involved in gasifier-engine system design. It arises from and supplements a WKU mechanical engineering senior project. The senior project has developed a wood gasification system designed to power a riding lawn mower. The thesis reiews theory-based design and separates it from informal hit and miss approaches—rule …

Redox-Responsive Polysulfide-Based Biodegradable Organosilica Nanoparticles For Delivery Of Bioactive Agents, Seyyed Pouya Hadipour Moghaddam, Jiban Saikia, Mostafa Yazdimamaghani, Hamidreza Ghandehari

Chemical and Biochemical Engineering Faculty Research & Creative Works

Design and development of silica nanoparticles (SiO2 NPs) with a controlled degradation profile promises effective drug delivery with a predetermined carrier elimination profile. In this research, we fabricated a series of redox-responsive polysulfide-based biodegradable SiO2 NPs with low polydispersity and with variations in size (average diameters of 58 ± 7, 108 ± 11, 110 ± 9, 124 ± 9, and 332 ± 6 nm), porosity, and composition (disulfide vs tetra sulfide bonds). The degradation kinetics of the nanoparticles was analyzed in the presence of 8 mM glutathione (GSH), mimicking the intracellular reducing condition. Results indicate that porosity and core composition …

Morphometric Analysis Of The Talus On The Cohort Of Healthy And Arthritic Patient Population:, Tia Arvaneh

USF Tampa Graduate Theses and Dissertations

Prevalence of osteoarthritis (OA) is less common in the ankle compared to other joints; however, deformation brought on by degeneration causes pain, loss of function, and overall decreased quality of life. Current surgical interventions for end-stage ankle OA are not as reliable as surgical treatments for other joints. Ankle arthroplasty currently has high failure rates, and there are lack of substantial data from long-term outcome studies. By understanding the morphometric changes that occur during the different stages of OA, we are able to identify early signs of the disease with the intention to apply treatment earlier in order to preclude …

The Arm Movement Detection (Amd) Test: A Fast Robotic Test Of Proprioceptive Acuity In The Arm, Leigh A. Mrotek, Maria Bengtson, Tina M. Stoeckmann, Lior Botzer, Claude Ghez, John Mcguire, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

Background

We examined the validity and reliability of a short robotic test of upper limb proprioception, the Arm Movement Detection (AMD) test, which yields a ratio-scaled, objective outcome measure to be used for evaluating the impact of sensory deficits on impairments of motor control, motor adaptation and functional recovery in stroke survivors.

Methods

Subjects grasped the handle of a horizontal planar robot, with their arm and the robot hidden from view. The robot applied graded force perturbations, which produced small displacements of the handle. The AMD test required subjects to respond verbally to queries regarding whether or not they detected …

Detection Of Structural Bolt Detorquing Using Direct Stethoscope Measurement, Joe Guarino, Robert Hamilton

Mechanical and Biomedical Engineering Faculty Publications and Presentations

A method for detecting loosened bolts in a structural joint based upon open-loop acoustic measurement is presented. The acoustic measurement is taken directly on the bolt head. The response of the bolt to a proximal hammer impact is evaluated and characterized using wavelet decomposition of the signal measured from the bolt head. Data were also taken from an accelerometer mounted longitudinally and transversely on the bolt head. Results from the stethoscope and the accelerometer are presented from a set of structural bolts in several conditions of preload and looseness. A stethoscope applied to the loose bolt and a proximal bolt …

The Effect Of Antigen Polymorphisms On Serological Antibody Detection Assays Based Upon The, Kristi M. Miley

USF Tampa Graduate Theses and Dissertations

Onchocerca volvulus is a filarial parasite transmitted to humans by female Simulium spp. black flies. Infection with this parasite can cause blindness and severe skin disease among humans in Africa and the Americas. Enzyme-linked Immunosorbent Assay serological testing of OV-16 antigen is a diagnostic tool for determining effective elimination of the parasite. Programs typically rely on OV–16 ELISA to evaluate the progress towards interruption and/or elimination of disease by mass drug distribution of ivermectin and vector larvicidal control efforts. As elimination grows closer, monoclonal antibody positive controls for OV-16 ELISA become important to develop for Onchocerca testing due to the …

Force Compensation And Recreation Accuracy In Humans, Benjamin Rigsby

USF Tampa Graduate Theses and Dissertations

As industry becomes increasingly reliant on robotic assistance and human-computer interfaces, the demand to understand the human sensorimotor system’s characteristics intensifies. Although this field of research has been going on for over a century, new technologies push the limits of the human motor system and our knowledge of it. With new technologies come new abilities, and, in the area of medical care and rehabilitation, the need to expand our knowledge of the sensorimotor system comes from both the patient and physician.

Two studies relating to human force interaction are presented in this thesis. The first study

focuses on humans’ ability …

Emg-Driven Inverse Dynamic Analysis Of Knee Contact Forces During Gait And Cycling Using Opensim, Megan V. Pottinger, Katherine Mavrommati, Scott Hazelwood, Stephen M. Klisch

Biomedical Engineering

Joint contact forces determine the loading experienced by cartilage tissue and, thus, may be used to predict risk of cartilage tissue damage and osteoarthritis (OA). Participating in low impact and/or non-weight bearing activities such as cycling may help reduce knee OA risk by limiting forces exerted during exercise [1]. Cycling is a common recommendation for rehabilitative or fitness sustainment exercise for select patients [1]. Although knee joint contact forces have been directly measured in gait and cycling using instrumented knee implants [2,3] and calculated in gait using EMG-driven analysis [4]; they have not been calculated in cycling using EMG-driven analysis. …

Principal Component Analysis Of Gait And Cycling Experiments: Crosstalk Error Reduction And Corrected Knee Axes, Jordan Skaro, Harsh Goel, Scott Hazelwood, Stephen M. Klisch

Biomedical Engineering

Crosstalk is a leading source of error in motion analysis [1-2]. Due to incorrect flexion axis direction that develops from marker placement error, crosstalk results in a strong, anatomically incorrect correlation between flexion-extension (FE) and adduction-abduction (AA) motions [1-2]. Thus, crosstalk limits the ability of biomechanical models to reflect the “true” motion of the knee. Principal Component Analysis (PCA) has been proposed as a post-hoc correction for crosstalk in prior gait studies [1-2]; however, previous studies have not proposed a method to determine PCA corrected knee axes. Further, it is not clear how PCA should be implemented in motion analysis …

Elbow And Shoulder Joint Torques Are Correlated With Body Mass Index But Not Game Pitch Count In Youth Baseball Pitchers, Jim Douglas Darke, Eshan M. Dandekar, Arnel Aguinaldo, Scott Hazelwood, Stephen M. Klisch

Biomedical Engineering

The number of ulnar collateral ligament (UCL) reconstructive (i.e. “Tommy John”) surgeries performed on youth baseball pitchers have more than doubled since 2000 [1]. Routinely pitching while fatigued is considered a leading factor associated with UCL injuries; adolescent pitchers who had elbow or shoulder surgery were 36 times more likely to have routinely pitched with arm fatigue [1]. MLB/USA Baseball Pitch Smart guidelines limit 9-10 yr. old pitchers to a maximum 75 pitches per game, a figure based on long-term studies related to injury prevention [2]. Several studies have shown that pitching kinematics (e.g. elbow flexion/extension and pronation/supination, scapulothoracic internal-external …

Knee Biomechanics During Cycling Are Similar For Normal Weight And Obese Subjects, Juan D. Gutierrez-Franco, Jordan Skaro, Scott Hazelwood, Stephen M. Klisch

Biomedical Engineering

Osteoarthritis (OA) is a degenerative disease of cartilage and bone tissue, and is linked to more than 70% of total hip and knee replacements [1]. In 1994 the direct and indirect costs of OA in the United States were $155 billion [2] and in 2006 OA resulted in approximately $10.5 billion in hospital charges [3]. Obesity is a risk factor for OA [1, 3, 4], likely due to increased knee loading [5, 6] and varus malalignment [7] in gait. Seated cycling has been recommended as a weight-loss exercise with lower knee loads than walking or jogging [8]. However, lack of …

Insights Into The Binding Mode Of Mek Type-Iii Inhibitors. A Step Towards Discovering And Designing Allosteric Kinase Inhibitors Across The Human Kinome, Zheng Zhao, Lei Xie, Philip E. Bourne

Publications and Research

Protein kinases are critical drug targets for treating a large variety of human diseases. Type- III kinase inhibitors have attracted increasing attention as highly selective therapeutics. Thus, understanding the binding mechanism of existing type-III kinase inhibitors provides useful insights into designing new type-III kinase inhibitors. In this work, we have systematically studied the binding mode of MEK-targeted type-III inhibitors using structural systems pharmacology and molecular dynamics simulation. Our studies provide detailed sequence, structure, interaction-fingerprint, pharmacophore and binding-site information on the binding characteristics of MEK type-III kinase inhibitors. We hypothesize that the helix-folding activation loop is a hallmark allosteric binding site …

Machine Learning Offers Predictive Insight Into The Silver Nanomaterial Protein Corona, Matthew Findlay

Bioengineering Senior Theses

The use of engineered nanomaterials (ENMs) in consumer and commercial products is increasing rapidly. The small size and high surface reactivity of ENMs gives them a range of attractive properties, and allows them to be incorporated into various materials. These properties make ENMs very appealing to modern industry, but also make ENMs toxic, causing serious health and environmental concerns. This toxicity is largely driven by the formation of a protein corona on the surface of ENMs. This protein corona is caused by proteins encountered in biological systems that bind to the surface of (ENMs). Despite the importance of the protein …

Exosome Membrane Bound Tnf-Receptor For The Treatment Of Rheumatoid Arthritis, Natalie Duong, Kevin Curley

Bioengineering Senior Theses

Rheumatoid arthritis (RA) is an autoimmune disease that causes painful inflammation of the synovium of the patient’s joints. However, current treatments for RA have a variety of drawbacks. They often are ineffective, expensive, invasive, risky, cause an immune response, and/ or only provide short term relief. Thus, we developed a new treatment for preventing inflammation: TNF-receptors anchored onto exosome surfaces. Exosomes are nanovesicles that are naturally secreted by most of the cells in our bodies. The many benefits of using exosomes include non-immunogenicity, natural stability in the body, and non-invasiveness. We have demonstrated that exosome membrane bound TNF-receptors have the …

Portable, Powerless Automation Of Valve Actuation For Microfluidic Large Scale Integration Technology, Andrew Schmidt, Matthew Fitzgerald

Bioengineering Senior Theses

Microfluidic large-scale integration (mLSI) is an emerging field that has the potential to fully automate the biological experimentation and technology development. mLSI offers high-throughput, while maintaining reduced costs and sample size in biochemical tests and experiments. The pneumatic control systems, and the use of solenoid valves that are needed for mLSI make this technology bulky and limits its use to specialized labs. Moreover, since the field is relatively new, few scientists are trained in microfluidic chip design and microfabrication. Eliminating the peripheral equipment from standard testing protocol will allow mLSI to be used in point-of-care settings and more widespread usage …