Biomedical Engineering and Bioengineering Commons^™

Modeling Of The Chest Wall Response To Prolonged Bracing In Pectus Carinatum, Brandon Sargent, Katie Varela, Dennis Eggett, Emily Mckenna, Christina Bates, Rebeccah Brown, Victor Garcia, Larry Howell

Biomedical Engineering Faculty Scholarship

Pectus carinatum is a chest wall deformity that is often treated through the wearing of an external brace. The treatment of the deformity could benefit from a greater understanding of chest wall characteristics under prolonged loading. These characteristics are difficult to model directly but empirical studies can be used to create statistical models. 185 patients from 2018-2020 received bracing treatment. Data on the severity of the deformity, treatment pressures, and time of wear were recorded at the first fitting and all subsequent follow-up visits. This data was analyzed using a statistical mixed effects model to identify significant measures and trends …

A Label-Free Fiber Ring Laser Biosensor For Ultrahigh Sensitivity Detection Of Salmonella Typhimurium, Shi Qiu, Bin Liu, Yuankui Leng, Edward Fox, Xian Zhou, Binbin Yan, Xinzhu Sang, Long Long, Xingdao He, Jinhui Yuan, Gerald Farrell, Qiang Wu

Articles

The rapid detection of low concentrations of Salmonella Typhimurium (S. Typhimurium) is an essential preventive measure for food safety and prevention of foodborne illness. The study presented in this paper addresses this critical issue by proposing a single mode-tapered seven core-single mode (STSS) fiber ring laser (FRL) biosensor for S. Typhimurium detection. The experimental results show that the specific detection time of S. Typhimurium is less than 20 min and the wavelength shift can achieve -0.906 nm for an S. Typhimurium solution (10 cells/mL). Furthermore, at a lower concentration of 1 cell/mL applied to the biosensor, a result of -0.183 …

Difference In Bioimpedance Across The Knee In Un-Injured Young Adults, Patrick J. Atkinson, Theresa Atkinson, Allison Seeley, Seerut Dhillon

Mechanical Engineering Publications

Background

Knee injuries induce swelling and resolution of swelling may be a useful factor in identifying states of healing and time to return to sports activities. Recent work has suggested that bioimpedance can provide an objective measure of swelling following total knee arthroplasty (TKA) and therefore may also provide guidance for clinical decision-making following knee injury. This study measures knee bioimpedance in young, active people to help define baseline variability and factors that influence limb to limb differences.

Methods

Bioimpedance was measured via sensors placed at the foot/ankle and thigh, in positions similar to those suggested for monitoring post-TKA swelling. …

Integrating The Spatial Pyramid Pooling Into 3d Convolutional Neural Networks For Cerebral Microbleeds Detection, Andre Accioly Veira

CCAC Theses and Dissertations

Cerebral microbleeds (CMB) are small foci of chronic blood products in brain tissues that are critical markers for cerebral amyloid angiopathy. CMB increases the risk of symptomatic intracerebral hemorrhage and ischemic stroke. CMB can also cause structural damage to brain tissues resulting in neurologic dysfunction, cognitive impairment, and dementia. Due to the paramagnetic properties of blood degradation products, CMB can be better visualized via susceptibility-weighted imaging (SWI) than magnetic resonance imaging (MRI).CMB identification and classification have been based mainly on human visual identification of SWI features via shape, size, and intensity information. However, manual interpretation can be biased. Visual screening …

An Experimentally Validated Computational Model For The Degradation And Fracture Of Magnesium-Based Implants In A Chemically Corrosive Environment, Mark M. Ousdigian

Dissertations, Master's Theses and Master's Reports

In the orthopedic and cardiovascular fields there is a growing interest for biodegradable implants, which can be naturally degraded in the body environment over time so that no extraction surgery is required. These implants must be designed to maintain their strength until the fracture has healed in the body, which could be influenced by many factors such as -the patient’s age, activities, body weight, pre-existing conditions etc. Hence, an ideal implant design should be done on a patient-by-patient basis. In the present work, a computational model is developed to predict the degradation and fracture of magnesium-based implants in a stress-coupled …

การพัฒนาระบบตรวจวัดสารประกอบอินทรีย์ระเหยง่ายโดยใช้ชุดอุปกรณ์เพิ่มความเข้มข้นพร้อมการปรับเปลี่ยนอุณหภูมิ, พรภวิษย์ สินสุขอุดมชัย

Chulalongkorn University Theses and Dissertations (Chula ETD)

งานวิจัยนี้มีวัตถุประสงค์เพื่อพัฒนาระบบตรวจวัดสารประกอบอินทรีย์ระเหยง่าย (Volatile organic compounds : VOCs) โดยใช้ชุดอุปกรณ์เพิ่มความเข้มข้น (Preconcentrator Array) ที่สามารถปรับเปลี่ยนอุณหภูมิได้ เพื่อให้สามารถเพิ่มความไว (sensitivity) และความจำเพาะ (selectivity) ในการตรวจวัดสาร VOCs ตัวอย่างที่มีหลายสารองค์ประกอบได้อย่างมีประสิทธิภาพ ระบบที่พัฒนาขึ้นนี้ได้นำสารดูดซับชนิดต่าง ๆ เช่น Tenax TA, Carbopack X และ CarboTrap B มาทดสอบใช้ โดยอาศัยรูปแบบของการให้อุณหภูมิและวิธีการวิเคราะห์ที่เหมาะสมเพื่อเพิ่มความแม่นยำในการตรวจวัดและการแยกแยะสารประกอบ VOCs ในตัวอย่างเป้าหมาย ในงานวิจัยนี้ได้ทำการออกแบบและพัฒนาระบบควบคุมความร้อนโดยใช้ไมโครคอนโทรลเลอร์ในการควบคุมการให้ความร้อนกับอุปกรณ์เพิ่มความเข้มข้น (Preconcentrator) จากนั้นได้ทำการทดสอบระบบที่พัฒนาขึ้นโดยทำการตรวจวัด VOCs ในสารตัวอย่างชนิดต่าง ๆ ที่ความเข้มข้นต่ำและวิเคราะห์ผลการวัดทดสอบด้วยการวิเคราะห์องค์ประกอบหลัก (Principal Component Analysis : PCA) จากผลการทดลองแสดงให้เห็นว่าระบบที่พัฒนาจากการใช้ชุดเพิ่มความเข้มข้นนี้สามารถตรวจวัดสาร VOCs ตัวอย่างที่เป็นตัวบ่งชี้ทางชีวภาพที่สำคัญของโรคโควิด-19 ได้อย่างมีประสิทธิภาพ นอกจากนี้ระบบที่พัฒนาขึ้นยังสามารถตรวจวัดสารตัวอย่างที่ประกอบด้วย VOCs ชนิดต่าง ๆ กันได้อย่างเหมาะสมเนื่องจากความสามารถในการเพิ่มความจำเพาะในการวัดของชุดอุปกรณ์เพิ่มความเข้มข้น ซึ่งระบบที่พัฒนาขึ้นในงานวิจัยนี้จะมีประโยชน์ในการประยุกต์ใช้ทางด้านการแพทย์และสาธารณสุข โดยเฉพาะอย่างยิ่งการตรวจคัดกรองโรคแบบไม่รุกล้ำและการตรวจวัดสาร VOCs ในสิ่งแวดล้อม

Nanomaterial Payload Delivery To Central Nervous System Glia For Neural Protection And Repair, Jayant Saksena, Adelle E. Hamilton, Ryan J. Gilbert, Jonathan M. Zuidema

Chemical and Biochemical Engineering Faculty Research & Creative Works

Central nervous system (CNS) glia, including astrocytes, microglia, and oligodendrocytes, play prominent roles in traumatic injury and degenerative disorders. Due to their importance, active pharmaceutical ingredients (APIs) are being developed to modulate CNS glia in order to improve outcomes in traumatic injury and disease. While many of these APIs show promise in vitro, the majority of APIs that are systemically delivered show little penetration through the blood–brain barrier (BBB) or blood-spinal cord barrier (BSCB) and into the CNS, rendering them ineffective. Novel nanomaterials are being developed to deliver APIs into the CNS to modulate glial responses and improve outcomes in …

Evaluation Of Cold Atmospheric Plasma For The Decontamination Of Flexible Endoscopes, R. C. Hervé, Michael G. Kong, Sudhir Bhatt, Hai-Lan Chen, E. E. Comoy, J-P. Deslys, T. J. Secker, C. W. Keevil

Bioelectrics Publications

Background: Despite adherence to standard protocols, residues including live microorganisms may remain on the various surfaces of reprocessed flexible endoscopes. Prions are infectious proteins notoriously difficult to eliminate.

Aim: We tested the potential of cold atmospheric plasma (CAP) for the decontamination of flexible endoscope various surfaces, measuring total proteins and prion-residual infectivity as an indicator of efficacy.

Methods: New PTFE endoscope channels and metal test surfaces spiked with test soil or prion-infected tissues were treated using different CAP-generating prototypes. Surfaces were then examined for the presence of residues using very sensitive fluorescence epi-microscopy. Prion residual infectivity was determined using the …

Extracellular Vesticles In Acute Respiratory Distress Syndrome: Understanding Protective And Harmful Signaling For The Development Of New Therapeutics, Matthew Bavuso, Noel Miller, Joshua M. Sill, Anca Dobrian, Ruben M. L. Colunga Biancatelli

Bioelectrics Publications

Acute respiratory distress syndrome (ARDS) is a severe respiratory condition characterized by increased lung permeability, hyper-inflammatory state, and fluid leak into the alveolar spaces. ARDS is a heterogeneous disease, with multiple direct and indirect causes that result in a mortality of up to 40%. Due to the ongoing Covid-19 pandemic, its incidence has increased up to ten-fold. Extracellular vesicles (EVs) are small liposome-like particles that mediate intercellular communication and play a major role in ARDS pathophysiology. Indeed, they participate in endothelial barrier dysfunction and permeability, neutrophil, and macrophage activation, and also in the development of a hypercoagulable state. A more …

Development Of A Vascularized Osteogenic Implant Using Fused Glycosaminoglycan-Chitosan Microcapsules, Charles Michael Gabrion

Wayne State University Theses

Osteoarthritis remains a poorly treatable outcome of traumatic cartilage injury as cartilage is unable to self-repair. Unfortunately, roughly 10% of all adults in the United States have been diagnosed with osteoarthritis although the true fraction is likely at least 30%. While the main focus of osteoarthritis research has been on treating damage to the cartilage, osteoarthritis will also lead to damage to the adjacent trabecular bone due to wear via shearing down of the tissue’s surface. Considering this, in conjuncture with transplanted cartilages’ inability to integrate into the native tissue, unlike the surrounding bone, the significance of a combined osteochondral …

Development Of Technetium-99m Labeled Psma For Spect Prostate Cancer Imaging, Kalapaphuk Tachatumvitoon

Chulalongkorn University Theses and Dissertations (Chula ETD)

Technetium-99m (Tc-99m) is the most employed radionuclide in nuclear imaging diagnosis because of its ideal physiochemical properties and ready availability. It particularly suitable for Single Photon Emission Computed Tomography (SPECT), leading to cost-effective compared to other radionuclides. This study consists of two aims to expand the utilization of Tc-99m radiopharmaceutical for prostate cancer which is one of the highest incidence rates and mortality cancer among men. Currently, Tc-99m radiopharmaceutical for SPECT diagnosis is not clinically available for prostate cancer. Firstly, the new formulation for Tc-99m complexation with PSMA-617, a current ligand for radionuclide therapy of prostate cancer with lutetium-177 (Lu-177), …

Extraction, Quantification, Characterization, And Application In Food Packaging Of Chitin And Chitosan From Mushrooms: A Review, Buliyaminu A. Alimi, Shivani Pathania, Jude Wilson, Brendan Duffy, Jesus Maria Frias

Articles

The application of chitin in food systems is limited by its insolubility in some common solvents and poor degradability. Hence, it is deacetylated to obtain chitosan, an industrially important derivative with excellent biological properties. Fungal-sourced chitosan is gaining prominence and industrial attraction because of its superior functional and biological properties, and vegan appeal. Further, the absence of such compounds as tropomyosin, myosin light chain, and arginine kinase, which are known to trigger allergic reactions, gives it an edge over marine-sourced chitosan in food and pharmaceutical applications. Mushrooms are macro-fungi with a significant content of chitin, with many authors reporting the …

Biom 1720: Introduction To Biomedical Engineering Tools (Syllabus), Stephen Strain

Biomedical Engineering Syllabi Archive

Course Description: Use of computer tools for data analysis, presentation, documentation; introduction to programming; individual and group design projects.

Biom 2720: Experimental Design And Analysis For Biomedical Engineering (Syllabus), Stephen Strain

Biomedical Engineering Syllabi Archive

Course Description: Application of probability, statistics, error analysis, uncertainty in design and performance of biomedical engineering experimentation; discussion and evaluation of common experimental designs for medical device development.

Biom 3010: Medical Measurements (Syllabus), Carl D. Herickhoff

Biomedical Engineering Syllabi Archive

Course Description: Theory and application of major types of sensors used in biomedical engineering and clinical medicine; principles of signal processing and instrumentation, such as frequency domain analysis, operational amplifiers, and filtration.

Engr 1009: Preparation For Engineering Problem Solving (Syllabus), Stephen Strain

Biomedical Engineering Syllabi Archive

Course Description: Applications of algebra and trigonometry to engineering problems. Accelerated preparation for an engineering or technology major.

Biom 3110(Honors): Medical Physiology (Syllabus), Bradford D. Pendley

Biomedical Engineering Syllabi Archive

Course Description: Basic principles of human physiology and how these are applied in medicine and biomedical engineering problem and devices; physiological principles using appropriate mathematical and engineering models to construct an understanding of how the body works as an integrated system.

Breast Density Classification Using Deep Learning, Conrad Thomas Testagrose

UNF Graduate Theses and Dissertations

Breast density screenings are an accepted means to determine a patient's predisposed risk of breast cancer development. Although the direct correlation is not fully understood, breast cancer risk increases with higher levels of mammographic breast density. Radiologists visually assess a patient's breast density using mammogram images and assign a density score based on four breast density categories outlined by the Breast Imaging and Reporting Data Systems (BI-RADS). There have been efforts to develop automated tools that assist radiologists with increasing workloads and to help reduce the intra- and inter-rater variability between radiologists. In this thesis, I explored two deep-learning-based approaches …

Analyzing Physiological Signals During The Menstrual Cycle: Introducing An Application Of Circular Statistics, Krystal D. Sides

UNF Graduate Theses and Dissertations

Physiological signals are used in engineering and the sciences to determine the state of functionality of certain physiological systems such as the human endometrium. Many women use the basal body temperature method to track ovulation, or their fertile window. However, temperature tracking alone is subject to environmental factors. Non-invasive wearable devices can be tools in recording cycle-related physiological features relevant to women’s health research. This research uses the Empatica E4 wristband to track changes in the physiological features during sleep across the menstrual cycle of ovulating and non-ovulating females. Due to the cyclic nature of menstrual cycles, analytic solutions to …

Defining Sagittal Plane Gait Mechanics And Joint Loading In People With Marfan Syndrome, Justin Melan Pol

Theses and Dissertations--Biomedical Engineering

Marfan syndrome (MFS) is a genetic condition that is associated with altered muscle composition, which leads to muscle dysfunction. People with MFS exhibit high instances of lower extremity (LE) joint pain that inhibits their ability to perform activities of daily living, such as walking. Despite these detrimental impacts of MFS, there have been no attempts to characterize the effects of MFS on LE joint loading and health during walking that are associated with LE pain and dysfunction. As people with MFS exhibit a high incidence rate of osteoarthritis (OA), the need to understand the potential alterations in LE extremity mechanics …