Data Science Commons^™

Human Intestinal Condition Identification Based-On Blended Spatial And Morphological Feature Using Artificial Neural Network Classifier, Ummi Athiyah, Arif Wirawan Muhammad, Ahmad Azhari

Knowledge Engineering and Data Science

Colon cancer is a type of disease that attacks the intestinal walls cell of humans. Colorectal endoscopic screening technique is a common step carried out by the health expert/gynecologist to determine the condition of the human intestine. Manual interpretation requires quite a long time to reach a result. Along with the development of increasingly advanced digital computing techniques, then some of the weaknesses of the manually endoscopic image interpretation analysis model can be corrected by automating the detection process of the presence or absence of cancerous cells in the gut. Identification of human intestinal conditions using an artificial neural network …

Earthquake Magnitude And Grid-Based Location Prediction Using Backpropagation Neural Network, Bagus Priambodo, Wayan Firdaus Mahmudy, Muh Arif Rahman

Knowledge Engineering and Data Science

Earthquakes, a type of inevitable natural disaster, is responsible for the highest average death toll per year compared to other types of a natural disaster. Even though it is inevitable, but it can be anticipated to minimize damage and casualties, such as predicting the earthquake‘s magnitude using a neural network. In this study, a backpropagation algorithm is used to train the multilayer neural network to weekly predict the average magnitude of earthquakes in grid-based locations in Indonesia. Based on the findings in this research, the neural network is able to predict the magnitude of earthquakes in grid-based locations across Indonesia …

Parallelization Of Partitioning Around Medoids (Pam) In K-Medoids Clustering On Gpu, Adhi Prahara, Dewi Pramudi Ismi, Ahmad Azhari

Knowledge Engineering and Data Science

K-medoids clustering is categorized as partitional clustering. K-medoids offers better result when dealing with outliers and arbitrary distance metric also in the situation when the mean or median does not exist within data. However, k-medoids suffers a high computational complexity. Partitioning Around Medoids (PAM) has been developed to improve k-medoids clustering, consists of build and swap steps and uses the entire dataset to find the best potential medoids. Thus, PAM produces better medoids than other algorithms. This research proposes the parallelization of PAM in k-medoids clustering on GPU to reduce computational time at the swap step of PAM. The parallelization …

Opinion Analysis For Emotional Classification On Emoji Tweets Using The Naïve Bayes Algorithm, Siti Sendari, Ilham Ari Elbaith Zaeni, Dian Candra Lestari, Hanny Prasetya Hariyadi

Knowledge Engineering and Data Science

Opinion Analysis is a research study needed to social media, since the content could become a trending topic and has a significant impact on social life. One of the social media that have a big contribution to cyberspace and information development is Twitter. In the Twitter application, users can insert images that represent emotions, facial expressions, or icons. Emoji is a graphic symbol in the form of an image to express a thing, with the Emoji, a text can be read and understood according to its meaning because the image represents it. Of the several things that have been mentioned …

Covid-19 Testnorm: A Tool To Normalize Covid-19 Testing Names To Loinc Codes, Xiao Dong, Jianfu Li, Ekin Soysal, Jiang Bian, Scott L Duvall, Elizabeth Hanchrow, Hongfang Liu, Kristine E Lynch, Michael Matheny, Karthik Natarajan, Lucila Ohno-Machado, Serguei Pakhomov, Ruth Madeleine Reeves, Amy M Sitapati, Swapna Abhyankar, Theresa Cullen, Jami Deckard, Xiaoqian Jiang, Robert Murphy, Hua Xu

Faculty, Staff and Student Publications

Large observational data networks that leverage routine clinical practice data in electronic health records (EHRs) are critical resources for research on coronavirus disease 2019 (COVID-19). Data normalization is a key challenge for the secondary use of EHRs for COVID-19 research across institutions. In this study, we addressed the challenge of automating the normalization of COVID-19 diagnostic tests, which are critical data elements, but for which controlled terminology terms were published after clinical implementation. We developed a simple but effective rule-based tool called COVID-19 TestNorm to automatically normalize local COVID-19 testing names to standard LOINC (Logical Observation Identifiers Names and Codes) …

Analysis On Suicidal Ideation Among Adolescents (12-17 Years) In The Usa, Himani Raturi

Electronic Theses, Projects, and Dissertations

Suicide is one of the leading health concerns in United States among adolescents and the presence of suicidal ideation (SI) is quite high, with ~20-30% of adolescents reporting it at some point. Though we have seen growth and development in the prevention of suicide, there is limited research on the ability to identify the adolescents which might be at risk for SI. The objective behind the project is to identify adolescents with SI using machine learning.

The project shows statistics from different articles on adolescents in the U.S. For this study, adolescent data was taken from NSDUH 2018. Moreover, detailed …

Big Data, Spatial Optimization, And Planning, Kai Cao, Wenwen Li, Richard Church

Research Collection School Of Computing and Information Systems

Spatial optimization represents a set of powerful spatial analysis techniques that can be used to identify optimal solution(s) and even generate a large number of competitive alternatives. The formulation of such problems involves maximizing or minimizing one or more objectives while satisfying a number of constraints. Solution techniques range from exact models solved with such approaches as linear programming and integer programming, or heuristic algorithms, i.e. Tabu Search, Simulated Annealing, and Genetic Algorithms. Spatial optimization techniques have been utilized in numerous planning applications, such as location-allocation modeling/site selection, land use planning, school districting, regionalization, routing, and urban design. These methods …

Efficient Vehicle Routing Optimization For Autistic Users, Mohammed Shabalah Abdulrahman Hasan

Student Works (2020-2029)

In recent years, daily life without a vehicle would be impossible. As an inevitable result, the number of vehicles on the road increases day by day in various large cities around the world. The increased number of vehicles is a big concern because it causes a lot of traffic congestions, especially during peak hours. Besides, there has been a rapid rise of on-demand Ride-Hailing Services (RHSs), such as Grab, Uber, EzCab, and MyCar, etc. This allows passengers with smartphones to place trip requests and assign them to drivers according to requester’s location and drivers' availability. In consequence, efficient routing algorithms …

Prediction Of Feed Utilization Performance In Clarias Gariepinus Using Multiple Linear Regression In Machine Learning, Adekunle Oluwatosin Familusi

Journal of Bioresource Management

Machine learning models can be used to make predictions about nutrient utilization performance index using available proximate analysis data on feed composition. Data from similar experiments on nutrient utilization performance was used to fit a multiple linear regression model for the prediction of four performance indexes. The Specific Growth Rate and percentage inclusion with strength of 0.57 was noted along with a negative relationship between protein efficiency and protein content. A negative relationship between Nitrogen Free Extract (NFE) and Protein Efficiency Ratio (PER) at NFE content ≥25 % was observed. PER was predicted with 85 % accuracy, while Weight Gain …

Janus: A Python Package For Agent-Based Modeling Of Land Use And Land Cover Change, K. E. Kaiser, A. N. Flores, C. R. Vernon

Geosciences Faculty Publications and Presentations

Janus is an open source Python package for agent-based modeling (ABM) of land use and land cover change (LULCC). Many ABMs of LULCC have been created across platforms, some of which are not ideal for large scale, high resolution scenarios. This model provides a simple object-oriented framework for creating ABMs specific to LULCC. The organizational philosophy of the modeling framework is to create software objects (agents) that are associated with specific and contextual attributes which are isolated from where those agents exist in the spatial setting of the model, and still provide clear linkages between the agent, their environment, and …

Improving Trust In Research: Supporting Claims With Evidence, Daniel B. Wright

Educational Psychology, Leadership, and Higher Education Faculty Research

Trust in science is important, and Open Education Studies aims to publish trusted research. Two issues are addressed here: access to the data on which the research is based and how these data are analyzed. Some guidelines from other entities are discussed. As a new journal our guidelines should be influenced by the opinions of readers and authors, and as such we welcome discussion of how to ensure trust in the research OES publishes.

Automatic Delamination Segmentation For Bridge Deck Based On Encoder-Decoder Deep Learning Through Uav-Based Thermography, Chongsheng Cheng, Zhexiong Shang, Zhigang Shen

Department of Construction Engineering and Management: Faculty Publications

Concrete deck delamination often demonstrates strong variations in size, shape, and temperature distribution under the influences of outdoor weather conditions. The strong variations create challenges for pure analytical solutions in infrared image segmentation of delaminated areas. The recently developed supervised deep learning approach demonstrated the potentials in achieving automatic segmentation of RGB images. However, its effectiveness in segmenting thermal images remains under-explored. The main challenge lies in the development of specific models and the generation of a large range of labeled infrared images for training. To address this challenge, a customized deep learning model based on encoder-decoder architecture is proposed …

Pathways To The Native Storyteller: A Method To Enable Computational Story Understanding, Aramide O. Kehinde

College of Computing and Digital Media Dissertations

The primary objective of this thesis is to develop a method that uses machine learning algorithms to enable computational story understanding. This research is conducted with the aim of establishing a system called the Native Storyteller that plans and creates storytelling experiences for human users. The paper first establishes the desired capabilities of the system and then deep dives into how to enable story understanding, which is the core ability the system needs to function. As such, the research places emphasis on natural language processing and its application to solving key problems in this context. Namely, machine representation of story …

Utilizing Neural Networks And Wearables To Quantify Hip Joint Angles And Moments During Walking And Stair Ascent, Megan V. Mccabe

ENGS 88 Honors Thesis (AB Students)

Wearable sensors were leveraged to develop two methods for computing hip joint angles and moments during walking and stair ascent that are more portable than the gold standard. The Insole-Standard (I-S) approach replaced force plates with force-measuring insoles and achieved results that match the curvature of results from similar studies. Peaks in I-S kinetic results are high due to error induced by applying the ground reaction force to the talus. The Wearable-ANN (W-A) approach combines wearables with artificial neural networks to compute the same results. Compared against the I-S, the W-A approach performs well (average rRMSE = 18%, R^{2 …}

Variability In The Analysis Of A Single Neuroimaging Dataset By Many Teams, Rotem Botvinik-Nezer, Tom Schonberg, Russell A. Poldrack, Zachary J. Cole, Matthew R. Johnson, Phui Cheng Lim, Evan N. Linz, Douglas H. Schultz, Joshua E. Zosky, Narps Management Team, Jean M. Vettel, More Than 100 Other Co-Authors

Department of Psychology: Faculty Publications

Data analysis workflows in many scientific domains have become increasingly complex and flexible. To assess the impact of this flexibility on functional magnetic resonance imaging (fMRI) results, the same dataset was independently analyzed by 70 teams, testing nine ex-ante hypotheses. The flexibility of analytic approaches is exemplified by the fact that no two teams chose identical workflows to analyze the data. This flexibility resulted in sizeable variation in hypothesis test results, even for teams whose statistical maps were highly correlated at intermediate stages of their analysis pipeline. Variation in reported results was related to several aspects of analysis methodology. Importantly, …

Chemostratigraphy Of Carbonate Gravity Flows Of The Wolfcamp Formation In Crockett County, Midland Basin, Texas, Alex Blizzard, Julie Bloxson

Electronic Theses and Dissertations

Sediment gravity flows into deep-water environments are important stratigraphic traps in lithologically diverse reservoirs generating multiple plays for hydrocarbon exploration. These highly heterogeneous deposits can be studied by utilizing chemostratigraphy and higher-order sequence stratigraphy; being an accurate method for reservoir characterization. Studying these gravity flows along a carbonate platform’s slope can further expand an understanding of the stratigraphy that is filling adjacent basins. The application of elemental analyses can support in identifying mineralogy that impact reservoir quality, especially when conventional testing cannot be applied.

This study utilizes five cores containing the Wolfcamp Formation from the southeastern slope of the Central …

Integrating Finance Dictionary In Lexicon-Based Approach With Machine Learning Algorithm To Analyse The Impact Of Opec News Sentiment On Financial Market, Ling Wu

Student Works (2020-2029)

Since last few decades, machine learning algorithm which trains computers to learn from experience, is one of the most rapidly developing techniques which settles in the intersection research field of statistics and computer science. This research aims to build a properly trained machine learning classifier to study the impact of Organization of Petroleum Exporting Countries (OPEC) news sentiment on stock prices of six Malaysian public listed companies (energy sector) in the main board of Bursa Malaysia. The data used in this research are collected during the period 2012-2017. To carry out the research, firstly, lexicon-based approach is used to analyze …

Mining User-Generated Content Of Mobile Patient Portal: Dimensions Of User Experience, Mohammad Al-Ramahi, Cherie Noteboom

Research & Publications

Patient portals are positioned as a central component of patient engagement through the potential to change the physician-patient relationship and enable chronic disease self-management. The incorporation of patient portals provides the promise to deliver excellent quality, at optimized costs, while improving the health of the population. This study extends the existing literature by extracting dimensions related to the Mobile Patient Portal Use. We use a topic modeling approach to systematically analyze users’ feedback from the actual use of a common mobile patient portal, Epic’s MyChart. Comparing results of Latent Dirichlet Allocation analysis with those of human analysis validated the extracted …

Privacy-Preserving Recommendation System Using Federated Learning, Rahul Basu

Theses

Federated Learning is a form of distributed learning which leverages edge devices for training. It aims to preserve privacy by communicating users’ learning parameters and gradient updates to the global server during the training while keeping the actual data on the users’ devices. The training on global server is performed on these parameters instead of user data directly while fine tuning of the model can be done on client’s devices locally. However, federated learning is not without its shortcomings and in this thesis, we present an overview of the learning paradigm and propose a new federated recommender system framework that …

A Web-Based, Positive Emotion Skills Intervention For Enhancing Posttreatment Psychological Well-Being In Young Adult Cancer Survivors (Empower): Protocol For A Single-Arm Feasibility Trial, John M. Salsman, Laurie E. Mclouth, Michael Cohn, Janet A. Tooze, Mia Sorkin, Judith T. Moskowitz

Behavioral Science Faculty Publications

BACKGROUND: Adolescent and young adult cancer survivors (AYAs) experience clinically significant distress and have limited access to supportive care services. Interventions to enhance psychological well-being have improved positive affect and reduced depression in clinical and healthy populations but have not been routinely tested in AYAs.

OBJECTIVE: The aim of this protocol is to (1) test the feasibility and acceptability of a Web-based positive emotion skills intervention for posttreatment AYAs called Enhancing Management of Psychological Outcomes With Emotion Regulation (EMPOWER) and (2) examine proof of concept for reducing psychological distress and enhancing psychological well-being.

METHODS: The intervention development and testing are …