Phylogenetic Relationships Among Native Oxytropis Species In Turkey Using The Trnl Intron, Trnl-F Igs, And Trnv Intron Cpdna Regions, Ayten Tekpinar, Seher Karaman Erkul, Zeki̇ Aytaç, Zeki̇ Kaya
Turkish Journal of Botany
We tested the phylogenetic utility of three chloroplast DNA loci, i.e. the trnL(UAA) intron, trnL(UAA)-F(GAA) intergenic spacer (IGS), and trnV(UAC) intron, across thirteen native Oxytropis species. Our objective was to determine whether any of these chloroplast DNA markers could be beneficial to figure out phylogenetic relationships among Oxytropis species. To increase the interspecific sampling, nine sequences of the trnL intron and trnL-F regions were retrieved from GenBank and included in the analyses. No sequence of the trnV intron region was available in the database and so only sequences of the native species were used for the analyses. Phylogenies derived from …
Identification Of Differentially Expressed Genes From Fusarium Oxysporum F. Sp Cubense And Trichoderma Asperellum (Prr2) Interaction In The Susceptible Banana Cultivar Grand Naine, Thangavelu Raman, Varun Gopalakrishnan, Ganga Devi Perumal
Turkish Journal of Botany
Identification of defense-related genes in the host is one of the most essential steps in understanding disease resistance mechanisms in plants. In this study, a suppression subtractive hybridization (SSH) library was constructed to study differential gene expression in banana plants mediated through a Fusarium wilt pathogen (Fusarium oxysporum f.sp cubense - Foc) and its interaction with the Foc effective biocontrol agent Trichoderma asperellum (prr2). Here cDNAs from the roots of banana cv. Grand Naine infected by Foc were used as the driver and cDNAs from Foc + T. asperellum inoculated banana plants as the tester population. After hybridization and cloning, …
Plant Biomass: Insights From Imaging Cell Walls Using Molecular Probes,
2016
TÜBİTAK
Plant Biomass: Insights From Imaging Cell Walls Using Molecular Probes, Utku Avci
Turkish Journal of Botany
Cell walls are an important and growing subject of research in plant biology. In the last decade, there has been an increasing interest in using cell walls as feedstock for the production of second generation biofuels. This has resulted in an expansion in the number of cell wall studies and has highlighted the need for a better understanding of cell wall structure and function. Cell walls are composed of polymers with complex and dynamic structures that vary between cell types and developmental stages as well as between taxonomic groups of plants. To address the diversity of glycans that form the …
Diversity And Ecology Of Benthic Algae In Karagöl Lake, Karagöl-Saharanational Park (Şavşat, Artvin, Turkey),
2016
TÜBİTAK
Diversity And Ecology Of Benthic Algae In Karagöl Lake, Karagöl-Saharanational Park (Şavşat, Artvin, Turkey), Bülent Akar, Bülent Şahi̇n
Turkish Journal of Botany
Benthic algal flora of Karagöl Lake, its seasonal variation, and the physical and chemical parameters of the water were studied between October 2008 and September 2010. The algal flora consisted of 112 taxa belonging to the divisions Charophyta (41), Chlorophyta (33), Cyanobacteria (18), Euglenozoa (17), Miozoa (2), and Ochrophyta (1). Six desmid taxa found in this research are new records for the freshwater algal flora of Turkey. The qualitative dominance of benthic taxa typical of slightly alkaline and mesotrophic ecosystems was observed. The qualitative and seasonal variations in epipelic taxa analyzed were dependent on the physicochemical characteristics of the water. …
Contents,
2016
University of Arkansas, Fayetteville
Contents, Discovery Editors
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Discovery: The Student Journal Of Dale Bumpers College Of Agricultural, Food And Life Sciences - Volume 17 2016,
2016
University of Arkansas, Fayetteville
Discovery: The Student Journal Of Dale Bumpers College Of Agricultural, Food And Life Sciences - Volume 17 2016, Several Authors
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Message From The Faculty Editor,
2016
University of Arkansas, Fayetteville
Message From The Faculty Editor, Mary Savin
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Effect Of Timing Of Shade On Growth, Development, Physiology, And Fruiting Of A Primocane Fruiting Blackberry In A Controlled Environment,
2016
University of Arkansas, Fayetteville
Effect Of Timing Of Shade On Growth, Development, Physiology, And Fruiting Of A Primocane Fruiting Blackberry In A Controlled Environment, Olivia C. Caillouet, Curt C. Rom, Jason Mcafee, Luke Freeman, Heather Friedrich
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
Primocane blackberry production in the upper south is limited by high temperatures during the bloom and early fruiting period, resulting in poor fruit set and poor fruit quality. Shade may have the potential to delay bloom and flowering to a more favorable season. A greenhouse study was established to evaluate the effects of shade on primocane blackberry growth, physiology, and fruiting. Single rooted plants of ‘Prime-Ark® 45’ were planted in 12-liter pots and grown in a greenhouse at the University of Arkansas System Division of Agriculture, Agriculture Research and Extension Center, Fayetteville, Arkansas. At approximately 0.25 m in height, one …
Evaluation Of Harvest Time/Temperature And Storage Temperature On Postharvest Incidence Of Red Drupelet Reversion Development And Firmness Of Blackberry (Rubus L. Subgenus Rubus Watson),
2016
University of Arkansas, Fayetteville
Evaluation Of Harvest Time/Temperature And Storage Temperature On Postharvest Incidence Of Red Drupelet Reversion Development And Firmness Of Blackberry (Rubus L. Subgenus Rubus Watson), Jack E. Mccoy, John R. Clarke, Alejandra A. Salgado, Andrew Jecmen
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
Since 1964, the University of Arkansas blackberry breeding program has worked to improve fruit quality and shipping capabilities. A major limitation in blackberry fruit is postharvest handling potential for the shipping market. Maintaining fruit firmness in storage is crucial. Red drupelet reversion (or simply reversion) is also an important postharvest disorder in which drupelets change from black to red during storage. It is hypothesized that reversion is increased when fruit is picked at hot temperatures and exposed to a rapid change of temperature. These studies evaluated harvest time/temperature, as well as storage temperature, on berry firmness and the incidence of …
Instructions For Authors,
2016
University of Arkansas, Fayetteville
Instructions For Authors, Discovery Editors
Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences
No abstract provided.
Age-Old Palms On Florida’S Ancient Ridges,
2016
Bucknell University
Age-Old Palms On Florida’S Ancient Ridges, Warren G. Abrahamson Ii
Faculty Journal Articles
Genetic fingerprinting, ramet growth rate determinations, and mathematical modeling (Minimum branching trees) were used to estimate clone ages of saw palmettos at Archbold Biological Station in Florida. Growth rates indicate that 500 year old saw palmetto ramets are common. Genetically identified clones (genets) are estimated to be thousands of years old, likely exceeding 5,000 years of age.
Study Of Phylogenetic Relationship Of Turkish Species Ofmatthiola (Brassicaceae) Based On Issr Amplification,
2016
TÜBİTAK
Study Of Phylogenetic Relationship Of Turkish Species Ofmatthiola (Brassicaceae) Based On Issr Amplification, Beki̇r Doğan, Mustafa Çeli̇k, Murat Ünal, Abdurrahman Sefali, Esra Marti̇n, Ayla Kaya
Turkish Journal of Botany
Matthiola W.T.Aiton is a taxonomically complex genus in which there are many problems, mostly with Matthiola longipetala and M. Odoratissima. Matthiola species native to Turkey were collected from various locations in Anatolia, and their DNA was isolated. Revision studies performed on the basis of molecular data obtained from studies conducted in recent years have made the phylogenetic relationships and systematic positions of the taxa more apparent and reliable. Consequently, the remaining taxonomic problems among the species have been resolved through the use of DNA-based molecular analysis methods, which, unlike phenotype studies, are not affected by environmental factors. The inter-simple sequence …
The Examinations Of Achene Ultrastructural Features Of Section Acrolophus(Centaurea, Asteraceae) Via Scanning Electron Microscopy, Feyza Candan, Tuna Uysal, Osman Tugay, Meryem Bozkurt, Kuddi̇si̇ Ertuğrul, Hakki Demi̇relma
Turkish Journal of Botany
In this study, the achene surfaces of 31 taxa belonging to the genus Centaurea L. Were examined in detail by means of electron microscopy. The main aim of this study was to characterize the microsculpture of the achene surface of the Turkish species of Centaurea sect. Acrolophus (Cass.) DC. (Asteraceae). Detailed descriptions of the achene surface were given for each taxon and a fruitful dendrogram was established by numerical analyses derived from the determined micromorphological features. The relationships among the taxa studied were briefly assessed using this generated dendrogram. The results indicated that the examined taxa had very high variations …
Astragalus Topalanense (Fabaceae), A New Species From Turkey,
2016
TÜBİTAK
Astragalus Topalanense (Fabaceae), A New Species From Turkey, Ahmet İlçi̇m, Lütfi̇ Behçet
Turkish Journal of Botany
Astragalus topalanense Behçet and İlçim sp. Nov. (section Malacothrix Bunge) is described as a new species from Bingöl Province, East Anatolia in Turkey. The new species is similar to Astragalus macrouroides Hub.-Mor., a species endemic to Turkey, and A. Macrourus Fisch. And C.A.Mey. The diagnostic characters and taxonomic comments on the species are presented. Seed and pollen characteristics are investigated using light and scanning electron microscopy. Notes are also presented on its ecology. A distribution map of the new and related species is also provided.
Leaflet Trichome Micromorphology In The Dolentes-Brevipedes Taxonomic Complex (Mimosa L., Mimosoideae),
2016
TÜBİTAK
Leaflet Trichome Micromorphology In The Dolentes-Brevipedes Taxonomic Complex (Mimosa L., Mimosoideae), Mariana Grohar, Sonia Rosenfeldt, Matias Morales
Turkish Journal of Botany
We studied leaflets of 18 taxa of the genus Mimosa, specifically the Dolentes-Brevipedes taxonomic complex, focusing on micromorphology, type, shape, and density of trichomes. Within the nonglandular trichomes we described 3 types of nonbranched and 2 types of branched trichomes. We also described 2 types of stalked glandular trichomes, extending the recent classifications of trichomes in Mimosa. Multiseriate trichomes with lateral projections, which resemble incipient branching, are described here for many taxa. Most studied taxa have pubescent leaflets and show great variability in trichome density values. We also found 3 different types of blade margins with variation in type, alignment, …
First Record Of Psylliostachys Spicata (Plumbaginaceae), Confirmation Of Salvia Pratensis (Lamiaceae) From Turkey, And Taxonomic Status Of Salvia Ertekinii, Ferhat Celep, Osman Karabacak, Maryam Malekmohammadi, Mehmet Fi̇dan, Musa Doğan
Turkish Journal of Botany
Psylliostachys spicata (Plumbaginaceae) is reported as a new genus record for Turkey; an amended species description is given. Bossier's record of Salvia pratensis (Lamiaceae) in Flora Orientalis is confirmed from Turkey. Additionally, the endemic Salvia ertekinii is reduced to a synonym of Salvia pinnata.
Vietnamese Ganoderma: Growth, Peculiarities, And Low-Molecular Composition Compared To European And Siberian Strains,
2016
TÜBİTAK
Vietnamese Ganoderma: Growth, Peculiarities, And Low-Molecular Composition Compared To European And Siberian Strains, Olga Tsivileva, Thao Nguyen, Long Vu, Nikolai Yurasov, Marina Chernyshova, Alexander Petrov, Viktor Galushka, Alexei Markin, Oleg Koftin
Turkish Journal of Botany
The species from the genus Ganoderma are known to be extremely important macrofungi in fundamental biological, medicinal, and socioeconomic aspects. The present communication describes the brief morphological description, macro- and microscopic details, and chemical constituents of the representatives of five species of Ganoderma mushroom collected from different sites in Vietnamese National Parks. These species were Ganoderma colossus, G. Neojaponicum, G. Cattienensis, G. Lucidum, and G. Applanatum. Three additional herbarium strains of Ganoderma from European and Siberian regions have been implemented in the present framework for the purposes of comparison. Cultural characterization on solid and liquid fermentation, and scanning electron microscopy …
Contributions To Turkish Pyronemataceae From Gaziantep Province,
2016
TÜBİTAK
Contributions To Turkish Pyronemataceae From Gaziantep Province, Abdullah Kaya, Yasi̇n Uzun, İbrahi̇m Hali̇l Karacan, Semi̇ha Yakar
Turkish Journal of Botany
Fourteen pyronemataceous macrofungi taxa (Aleuria exigua Rifai; Cheilymenia catenipila J. Moravec; Cheilymenia vitellina (Pers.) Dennis; Geopyxis majalis (Fr.) Sacc.; Geopyxis vulcanalis (Peck) Sacc.; Humaria aurantia (Clem.) Häffner, Benkert and Krisai; Kotlabaea deformis (P. Karst.) Svrcek; Pulvinula johannis Lantieri; Pyronema domesticum (Sowerby) Sacc.; Scutellinia trechispora (Berk. and Broome) Lambotte; Smardaea planchonis (Dunal ex Boud.) Korf and W.Y. Zhuang; Tricharina ochroleuca (Bres.) Eckblad; Tricharina praecox (P. Karst.) Dennis; and Trichophaeopsis bicuspis (Boud.) Korf and Erb) are given as new records for the mycobiota of Turkey from Gaziantep Province. Three of them are the first members of the genera Kotlabaea Svrcek, Smardaea Svrcek, …
Taxonomy Of The Genus Athallia And Its Diversity In Turkey,
2016
TÜBİTAK
Taxonomy Of The Genus Athallia And Its Diversity In Turkey, Jan Vondrak, Mehmet Gökhan Halici, Mi̇that Güllü, Rasi̇me Demi̇rel
Turkish Journal of Botany
Molecular analyses of ITS nrDNA, using 42 new and 56 GenBank sequences, revealed 12 supported lineages of Athallia consistent with phenotype data. We regard these lineages as species. Eight of them were previously recognized as species in Athallia, and here we make three new combinations: A. Baltistanica, A. Brachyspora, and A. Necator. Eight of these species have been recorded in Turkey; of them, A. Baltistanica and A. Saxifragarum are new to the country. The former is also new to Greece. Athallia baltistanica is recorded for the first time outside the Karakoram Mountains (N Pakistan). We propose a broader species concept …
Validation Of Rapd Markers Associated With Frost Tolerancein Winter Faba Bean (Vicia Faba L.),
2016
TÜBİTAK
Validation Of Rapd Markers Associated With Frost Tolerancein Winter Faba Bean (Vicia Faba L.), Ahmed Sallam, Regina Martsch
Turkish Journal of Botany
A set of 189 single seed lines (validation set, v-set), derived from a natural crossing crossing between 11 founder lines, were used as a different genetic background to validate markers associated with frost tolerance and leaf fatty acid composition content in the winter faba bean. These lines were evaluated in 20 replications with lattice design under three freezing temperatures (-16 °C, -18 °C, and -19 °C). Two morphological traits, regrowth after frost (REG) and area under symptom progress curve (AUSPC), were scored. In addition, leaf fatty acid composition content was analyzed after hardening conditions (without frost). High significant correlation was …
