University of Nebraska at Lincoln
Department of Primary Industries and Regional Development, Western Australia
Liberty University
Characterization Of Boreal-Arctic Vegetation Growth Phases And Active Soil Layer Dynamics In The High-Latitudes Of North America: A Study Combining Multi-Year In Situ And Satellite-Based Observations,
2023
The Graduate Center, City University of New York
Characterization Of Boreal-Arctic Vegetation Growth Phases And Active Soil Layer Dynamics In The High-Latitudes Of North America: A Study Combining Multi-Year In Situ And Satellite-Based Observations, Michael G. Brown
Dissertations, Theses, and Capstone Projects
This dissertation examined the seasonal freeze/thaw activity in boreal-Arctic soils and vegetation physiology in Alaska, USA and Alberta, Canada, using in situ environmental measurements and passive microwave satellite observations. The boreal-Arctic high-latitudes have been experiencing ecosystem changes more rapidly in comparison to the rest of Earth due to the presently warming climatic conditions having a magnified effect over Polar Regions. Currently, the boreal-Arctic is a carbon sink; however, recent studies indicate a shift over the next century to become a carbon source. High-latitude vegetation and cold soil dynamics are influenced by climatic shifts and are largely responsible for the regions …
Desalination: Adapting To A Changing Climate And An Increasing Demand For Freshwater,
2023
University of San Francisco
Desalination: Adapting To A Changing Climate And An Increasing Demand For Freshwater, Rebecca A. Acosta
Master's Projects and Capstones
The state of California is just one place in the world that is experiencing an increasing demand for freshwater while also experiencing increasingly hotter conditions and longer periods of drought. There are a number of plants slated for development in the state of California but have been met with resistance from the public with concerns regarding their impacts to the surrounding marine environments. This paper provides background on desalination plants, provides evidence for a potential indicator species, identifies potential impacts to marine environments, and addresses stakeholder concerns and perceptions around desalination plants.
Establishing Big Sagebrush Seedlings On The Colorado Plateau,
2023
Utah State University
Establishing Big Sagebrush Seedlings On The Colorado Plateau, Kari E. Veblen, Eric Thacker, Mark Larese-Casanova, Kyle Nehring, Mike Duniway, Colby Brungard
All Current Publications
Factors such as soil type and precipitation vary across rangeland landscapes, and these factors affect restoration outcomes and ultimately mean that “one size fits all” management strategies are not effective across large, complex landscapes. Big sagebrush (Artemisia tridentata) is a foundational rangeland species that is important to wildlife habitat across the western U.S. On the Colorado Plateau, sagebrush is important browse for ungulates, such as mule deer and pronghorn, which motivates a great deal of restoration effort. However, most scientific knowledge of big sagebrush comes from the Great Basin, and we know much less about how to restore sagebrush on …
Evaluating Planting Green And Herbicides For Integrated Weed Management And Their Effect On Soil Properties In Corn And Soybean In Nebraska,
2023
University of Nebraska-Lincoln
Evaluating Planting Green And Herbicides For Integrated Weed Management And Their Effect On Soil Properties In Corn And Soybean In Nebraska, Trey Stephens
Theses, Dissertations, and Student Research in Agronomy and Horticulture
Producers across the Midwest are finding new ways to implement cover crops into cropping systems and the practice of “Planting Green” is one of the newest uses of cover crops. When planting green, producers plant their row crops into actively growing cover crops and terminate the cover crop at time of planting or shortly after planting. This practice would allow for higher biomass accumulation of the cover crop and could aid in weed management of herbicide-resistant weeds. The objective of the first two studies was to evaluate planting green and its effect on soil-applied residual herbicides, weed management, dicamba/glyphosate-resistant soybean …
A Programmatic Geographic Information Systems Analysis Of Plant Hardiness Zones,
2023
East Tennessee State University
A Programmatic Geographic Information Systems Analysis Of Plant Hardiness Zones, Andrew Bowen
Electronic Theses and Dissertations
The Plant Hardiness Zone Map consists of thirteen geographical zones that describe whether a plant can survive based on average annual minimal temperatures. As climate change progresses, minimum temperatures in all regions are expected to change. This work programmatically evaluates predicted future climate projection data and converts it to United States Department of Agriculture-defined hardiness zones. Through the next 80 years, hardiness zones are projected to move poleward; in effect, colder zones will lose area and warmer zones will gain area globally. Some implications include changes in crop growing degree days, which could alter crop productivity, migration and settlement of …
Genomic Selection For Yield And Seed Composition Stability In An Applied Soybean Breeding Program,
2023
University of Nebraska - Lincoln
Genomic Selection For Yield And Seed Composition Stability In An Applied Soybean Breeding Program, Benjamin Harms
Theses, Dissertations, and Student Research in Agronomy and Horticulture
Stability traits are of primary importance in plant breeding to ensure consistency in phenotype across a range of environments. However, selection efficiency and accuracy for stability traits can be hindered due to the requirement of obtaining phenotype data across multiple years and environments for proper stability analysis. Genomic selection is a method that allows prediction of a phenotype prior to observation in the field using genome-wide marker data and phenotype data from a training population. To assess prediction of stability traits, two elite-yielding soybean populations developed three years apart in the same breeding program were used. The individuals in each …
Characterization Of Physical And Biochemical Traits In Wheat And Corn Plants Using High Throughput Image Analysis,
2023
University of Nebraska-Lincoln
Characterization Of Physical And Biochemical Traits In Wheat And Corn Plants Using High Throughput Image Analysis, Kantilata Thapa
Biological Systems Engineering--Dissertations, Theses, and Student Research
Plant phenotyping has been recognized as a rapidly growing field of research due to the labor-intensive, destructive, and time-consuming nature of traditional phenotyping methods. These phenotyping bottlenecks can be addressed by advancements in image-based phenotyping like RGB and hyperspectral imaging for the assessment of plant traits important for breeding purposes. This study aims (1) to characterize the physical and biochemical traits of wheat and corn plants using RGB and hyperspectral imaging in the greenhouse, and (2) to estimate leaf nitrogen (N), phosphorus (P), and potassium (K) content using hyperspectral imaging and an analytical spectral device (ASD spectrometer) and compare the …
Louisiana Resident Perceptions On Invasive Aquatic Plant Species And Their Management,
2023
Louisiana State University
Louisiana Resident Perceptions On Invasive Aquatic Plant Species And Their Management, Anna Ribbeck
LSU Master's Theses
Determining the public perception of invasive species in Louisiana is an important tool to help shape and develop future management decisions, educational material and ultimately public policy. Therefore, the primary purpose of this study was to determine the perceptions of adult Louisiana residents regarding invasive aquatic plant species and their management. An online survey was used to collect data on registered Louisiana residential boaters’ perceptions towards invasive aquatic plants and their management. A postcard with a quick response code leading to the survey was mailed to 6,000 randomly selected Louisiana registered residential boaters. Of the 230 Louisiana registered boaters that …
A Plea For Scale, And Why It Matters For Invasive Species
Management, Biodiversity And Conservation,
2023
University of Nebraska-Lincoln
A Plea For Scale, And Why It Matters For Invasive Species Management, Biodiversity And Conservation, Nicholas A. Mcmillan, Samuel D. Fuhlendorf, Craig A. Davis, Robert G. Hamilton, Landon. K. Neumann, Samantha M. Cady
Agronomy & Horticulture -- Faculty Publications
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Invasive species are suspected to be major contributors to biodiversity declines worldwide. Counterintuitively, however, invasive species effects are likely scale dependent and are hypothesized to be positively related to biodiversity at large spatial scales. Past studies investigating the effect of invasion on biodiversity have been mostly conducted at small scales (<100 m2) that cannot represent large dynamic landscapes by design. Therefore, replicated experimental evidence supporting a negative effect of invasive plants on biodiversity is lacking across many landscape types, including large grasslands.
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We collected data across eight large (333–809 ha) grassland landscapes managed with pyric herbivory—that is the recoupling …
Soil Depth And Geographic Distance Modulate Bacterial
Β-Diversity
In Deep Soil Profiles Throughout The U.S. Corn Belt,
2023
University of Nebraska–Lincoln
Soil Depth And Geographic Distance Modulate Bacterial Β-Diversity In Deep Soil Profiles Throughout The U.S. Corn Belt, Lucas Dantas Lopes, Stephanie L. Futrell, Emily E. Wright, Gerasimos J. Danalatos, Michael J. Castellano, Tony J. Vyn, Sotirios V. Archontoulis, Daniel P. Schachtman
Agronomy & Horticulture -- Faculty Publications
Understanding how microbial communities are shaped across spatial dimensions is of fundamental importance in microbial ecology. However, most studies on soil biogeography have focused on the topsoil microbiome, while the factors driving the subsoil microbiome distribution are largely unknown. Here we used 16S rRNA amplicon sequencing to analyse the factors underlying the bacterial β-diversity along vertical (0–240 cm of soil depth) and horizontal spatial dimensions (~500,000 km2) in the U.S. Corn Belt. With these data we tested whether the horizontal or vertical spatial variation had stronger impacts on the taxonomic (Bray-Curtis) and phylogenetic (weighted Unifrac) β-diversity. Additionally, we …
Graph Convolutional Network Using Adaptive Neighborhood
Laplacian Matrix For Hyperspectral Images With Application To
Rice Seed Image Classification,
2023
University of Puerto Rico at Mayaguez
Graph Convolutional Network Using Adaptive Neighborhood Laplacian Matrix For Hyperspectral Images With Application To Rice Seed Image Classification, Jairo Orozco, Vidya Manian, Estefania Alfaro, Harkamal Walia, Balpreet K. Dhatt
Agronomy & Horticulture -- Faculty Publications
Graph convolutional neural network architectures combine feature extraction and convolutional layers for hyperspectral image classification. An adaptive neighborhood aggregation method based on statistical variance integrating the spatial information along with the spectral signature of the pixels is proposed for improving graph convolutional network classification of hyperspectral images. The spatial-spectral information is integrated into the adjacency matrix and processed by a single-layer graph convolutional network. The algorithm employs an adaptive neighborhood selection criteria conditioned by the class it belongs to. Compared to fixed window-based feature extraction, this method proves effective in capturing the spectral and spatial features with variable pixel neighborhood …
A Role For Heritable Transcriptomic Variation
In Maize Adaptation To Temperate Environments,
2023
University of Nebraska-Lincoln
A Role For Heritable Transcriptomic Variation In Maize Adaptation To Temperate Environments, Guangchao Sun, Huihui Yu, Peng Wang, Martha Lopez‑Guerrero, Ravi V. Mural, Olivier N. Mizero, Marcin Grzybowski, Baoxing Song, Karin V. Van Dijk, Daniel P. Schachtman, Chi Zhang, James C. Schnable
Agronomy & Horticulture -- Faculty Publications
Background: Transcription bridges genetic information and phenotypes. Here, we evaluated how changes in transcriptional regulation enable maize (Zea mays), a crop originally domesticated in the tropics, to adapt to temperate environments.
Result: We generated 572 unique RNA-seq datasets from the roots of 340 maize genotypes. Genes involved in core processes such as cell division, chromosome organization and cytoskeleton organization showed lower heritability of gene expression, while genes involved in anti-oxidation activity exhibited higher expression heritability. An expression genome-wide association study (eGWAS) identified 19,602 expression quantitative trait loci (eQTLs) associated with the expression of 11,444 genes. A …
Large And Stable Genome Edits At
The Sorghum Alpha Kafirin Locus
Result In Changes In Chromatin
Accessibility And Globally
Increased Expression Of Genes
Encoding Lysine Enrichment,
2023
University of Nebraska-Lincoln, University of Missouri
Large And Stable Genome Edits At The Sorghum Alpha Kafirin Locus Result In Changes In Chromatin Accessibility And Globally Increased Expression Of Genes Encoding Lysine Enrichment, J. Preston Hurst, Abou Yobi, Aixia Li, Shirley Sato, Thomas E. Clemente, Ruthie Angelovici
Agronomy & Horticulture -- Faculty Publications
Introduction: Sorghum is a resilient and widely cultivated grain crop used for feed and food. However, it’s grain is deficient in lysine, an essential amino acid. This is due to the primary seed storage proteins, the alpha-kafirins, lacking lysine. It has been observed that reductions in alpha-kafirin protein results in rebalancing of the seed proteome and a corresponding increase in non-kafirin proteins which leads to an increased lysine content. However, the mechanisms underlying proteome rebalancing are unclear. This study characterizes a previously developed gene edited sorghum line, with deletions at the alpha kafirin locus.
Methods: A single consensus …
Large And Stable Genome Edits At
The Sorghum Alpha Kafirin Locus
Result In Changes In Chromatin
Accessibility And Globally
Increased Expression Of Genes
Encoding Lysine Enrichment,
2023
University of Nebraska-Lincoln, University of Missouri
Large And Stable Genome Edits At The Sorghum Alpha Kafirin Locus Result In Changes In Chromatin Accessibility And Globally Increased Expression Of Genes Encoding Lysine Enrichment, J. Preston Hurst, Abou Yobi, Aixia Li, Shirley Sato, Thomas E. Clemente, Ruthie Angelovici, David R. Holding
Agronomy & Horticulture -- Faculty Publications
Introduction: Sorghum is a resilient and widely cultivated grain crop used for feed and food. However, it’s grain is deficient in lysine, an essential amino acid. This is due to the primary seed storage proteins, the alpha-kafirins, lacking lysine. It has been observed that reductions in alpha-kafirin protein results in rebalancing of the seed proteome and a corresponding increase in non-kafirin proteins which leads to an increased lysine content. However, the mechanisms underlying proteome rebalancing are unclear. This study characterizes a previously developed gene edited sorghum line, with deletions at the alpha kafirin locus.
Methods: A single consensus …
Increased Light Exposure Decreases Lichen Abundance On Linden Trees In The Prairie Grassland Biome Of West Central Minnesota,
2023
University of Minnesota - Morris
Increased Light Exposure Decreases Lichen Abundance On Linden Trees In The Prairie Grassland Biome Of West Central Minnesota, Cameron Berthiaume, Sanjana Kidambi, Madelyn Schoenberger
Scholarly Horizons: University of Minnesota, Morris Undergraduate Journal
Percent lichen cover on the four cardinal faces of linden trees on the University of Minnesota Morris campus was recorded in order to determine if lichen abundance is linked to the varying levels of sunlight each cardinal face receives.
Soybean Seed Protein Concentration Is Limited By Nitrogen Supply In Tropical And Subtropical Environments In Brazil,
2023
University of São Paulo
Soybean Seed Protein Concentration Is Limited By Nitrogen Supply In Tropical And Subtropical Environments In Brazil, E. H. Figueiredo Moura Da Silva, N. Cafaro La Menza, G. G. Munareto, A. J. Zanon, Santos Carvalho, F. R. Marin
Agronomy & Horticulture -- Faculty Publications
Soybean production contributes to ca. 60% of global plant-based protein used for food and feed. Brazil is the largest soybean producer and exporter, with 60% from tropical and 40% from subtropical environments. Nitrogen (N) can play an essential role in the storage of proteins in seeds; thus, it could be a key factor in increasing the quantity and quality of seeds in high-yielding soybean crops. Unlike in temperate environments, there is a gap of knowledge on whether soybean grown under tropical and subtropical climates are limited by N-fertilization to sustain the seed yield increase without detriments in seed protein concentration. …
De Novo Assembly And Comparative Analyses
Of Mitochondrial Genomes In Piperales,
2023
The Chinese Academy of Sciences, University of Chinese Academy of Sciences
De Novo Assembly And Comparative Analyses Of Mitochondrial Genomes In Piperales, Runxian Yu, Xudong Chen, Lingjie Long, Matthias Jost, Ran Zhao, Lumei Liu, Jeffrey P. Mower, Claude W. Depamphilis, Stefan Wanke, Yuannian Jiao
Agronomy & Horticulture -- Faculty Publications
The mitochondrial genome of Liriodendron tulipifera exhibits many ancestral angiosperm features and a remarkably slow evolutionary rate, while mitochondrial genomes of other magnoliids remain yet to be characterized. We assembled nine new mitochondrial genomes, representing all genera of perianth-bearing Piperales, as well as for a member of the sister clade: three complete or nearly complete mitochondrial genomes from Aristolochiaceae and six additional draft assemblies including Thottea, Asaraceae, Lactoridaceae, and Hydnoraceae. For comparative purpose, a complete mitochondrial genome was assembled for Saururus, a member of the perianth-less Piperales. The average number of short repeats (50–99 bp) was much larger …
An Innovative Approach To Improve Oil Production And Quality Of
Mustard (Brassica Juncea L.) With Multi-Nutrient-Rich Polyhalite,
2023
University of Nebraska-Lincoln, Govind Ballabh Pant University of Agricultural & Technology, Dr. Rajendra Prasad Central Agricultural University
An Innovative Approach To Improve Oil Production And Quality Of Mustard (Brassica Juncea L.) With Multi-Nutrient-Rich Polyhalite, Biswajit Pramanick, B.S. Mahapatra, Debarati Datta, Prithwiraj Dey, S.P. Singh, Ajay Kumar, Bappa Paramanik, Neeraj Awasthi
Agronomy & Horticulture -- Faculty Publications
Polyhalite popularly known as POLY4 is a multi-nutrient fertiliser containing K, S, Mg, Ca, and micronutrients. POLY4 has a low carbon footprint, is certified for organic agriculture, and has the potential to improve crop productivity and quality attributes Indian mustard which often faces challenges due to imbalanced nutrition supplied in the current fertilisation schedule. The hypothesis of the study was that the multi-nutrient fartiliser POLY4 can ensure balanced nutrition for Indian mustard. Considering this, a field experiment was conducted during the winter seasons of 2017–18 and 2018–19 to evaluate the effect of POLY4 on Indian mustard (Brassica juncea L.) …
Pearl Millet Response To
Drought: A Review,
2023
Oklahoma State University, University of Nebraska-Lincoln
Pearl Millet Response To Drought: A Review, Nikee Shrestha, Hao Hu, Kumar Shrestha, Andrew N. Doust
Agronomy & Horticulture -- Faculty Publications
The C4 grass pearl millet is one of the most drought tolerant cereals and is primarily grown in marginal areas where annual rainfall is low and intermittent. It was domesticated in sub-Saharan Africa, and several studies have found that it uses a combination of morphological and physiological traits to successfully resist drought. This review explores the short term and long-term responses of pearl millet that enables it to either tolerate, avoid, escape, or recover from drought stress. The response to short term drought reveals fine tuning of osmotic adjustment, stomatal conductance, and ROS scavenging ability, along with ABA and ethylene …
Pearl Millet Response To
Drought: A Review,
2023
Oklahoma State University, University of Nebraska-Lincoln
Pearl Millet Response To Drought: A Review, Nikee Shrestha, Hao Hu, Kumar Shrestha, Andrew N. Doust
Agronomy & Horticulture -- Faculty Publications
The C4 grass pearl millet is one of the most drought tolerant cereals and is primarily grown in marginal areas where annual rainfall is low and intermittent. It was domesticated in sub-Saharan Africa, and several studies have found that it uses a combination of morphological and physiological traits to successfully resist drought. This review explores the short term and long-term responses of pearl millet that enables it to either tolerate, avoid, escape, or recover from drought stress. The response to short term drought reveals fine tuning of osmotic adjustment, stomatal conductance, and ROS scavenging ability, along with ABA and ethylene …
