The Epilithic And Epipelic Diatom Flora Of The Balikhli River, Northwest Iran,
2018
TÜBİTAK
The Epilithic And Epipelic Diatom Flora Of The Balikhli River, Northwest Iran, Jamileh Panahy Mirzahasanlou, Taher Nejadsattari, Zohreh Ramezanpour, Javid Imanpour Namin, Younes Asri
Turkish Journal of Botany
The taxonomic composition of diatom flora of the Balikhli River (Balikhli Chay), Northwest Iran, was studied from October 2013 through September 2014. In total 109 taxa belonging to 50 genera were identified. Nitzschia (18 spp.), Navicula (9 spp.), and Gomphonema (7 spp.) were the most abundant genera. Twenty-five diatom species were found in more than half of the samples; among them, Nitzschia inconspicua, Planothidium lanceolatum, Amphora pediculus, Navicula trivialis, Gomphonema olivaceum, Nitzschia palea, and Rhoicosphenia abbreviata were the most abundant taxa, which are characteristic for alkaline and eutrophic waters. The centric diatoms constituted only 4.54% of all identified taxa. In …
New Contributions To The Turkish Ascomycota,
2018
TÜBİTAK
New Contributions To The Turkish Ascomycota, Abdullah Kaya, Yasi̇n Uzun
Turkish Journal of Botany
Nine discomycete and one sordariomycete (Ascomycota) species are reported for the first time from Turkey. The genera Coccomyces, Kompsoscypha, Pseudopithyella, Strobiloscypha, and Lasiosphaeris have not been reported before in the country. Anthracobia, Plicaria, Sclerotinia, and Pithya species are new records added to the previous knowledge. Macro- and micromorphological descriptions and illustrations for each new taxon are provided.
Seed Structure Of Some Taxa Of The Genus Crocus L. (Iridaceae) Series Crocus,
2018
TÜBİTAK
Seed Structure Of Some Taxa Of The Genus Crocus L. (Iridaceae) Series Crocus, Mehmet Cengi̇z Karai̇smai̇loğlu, Levent Şik, Almila Gemi̇ci̇oğlu, Osman Erol
Turkish Journal of Botany
In this study, the macro- and micromorphological seed characteristics of the genus Crocus L. series Crocus taxa, including C. pallasii , C. turcicus , C. dispathaceus , C. asumaniae , C. mathewii , C. thomasii , C. oreocreticus , and C. cartwrightianus , were observed. Morphological characteristics, such as the size, shape, color, and seed surface structures, were analyzed using stereo and scanning electron microscopes. Testa layer structures including the outer and inner testae, phytomelan layer structure and thickness, and seed endosperm cell features were studied. Differences in the seed, raphe size, seed surface patterns, inner testa features, and phytomelan …
Notes On The Genus Frondaria (Orchidaceae) With Description Of New Species,
2018
TÜBİTAK
Notes On The Genus Frondaria (Orchidaceae) With Description Of New Species, Dariusz Szlachetko, Marta Kolanowska, Max Rykaczewski
Turkish Journal of Botany
The specific diversity of Neotropical orchid genus Frondaria is evaluated based on morphological data. Frondaria was considered a monospecific taxon for years; however, our recent studies on Andean orchids indicated that it is actually much more variable. Within Colombian material, we found a species which does not fit the morphological description of F. caulescens and described it here as a new species named F. colombiana . The novelty is characterized by inflorescence being three times as long as the ramicaul, the tridentate leaf apex with middle tooth as long as lateral ones, papillate apices of sepals, and oblong-ligulate lip middle …
Birds And Vegetation Structure Of Isolated Juniper And Oak Communities In The Trans-Pecos Chihuahuan Desert.,
2018
University of Texas at El Paso
Birds And Vegetation Structure Of Isolated Juniper And Oak Communities In The Trans-Pecos Chihuahuan Desert., Kayla Garza
Open Access Theses & Dissertations
Birds of the Trans-Pecos region are historically understudied, with most literature covering birds of desert grasslands and scrub in New Mexico and Northern Mexico. A multitude of vegetation communities within the Chihuahuan Desert have also been neglected due to this gap in the research, for reasons including lack of access to public or preserve land in West Texas, and rough terrain. Indio Mountains Research Station (IMRS), is located 42-km southwest of Van Horn, Texas and encompasses many different vegetation communities, including juniper-oak habitats of arroyo and canyon systems. The purpose of this study was to document the bird species utilizing …
Bioremoval Of Toxic Dye By Using Different Marine Macroalgae,
2018
TÜBİTAK
Bioremoval Of Toxic Dye By Using Different Marine Macroalgae, Hanan Omar, Adel El-Gendy, Khairia Al-Ahmary
Turkish Journal of Botany
The removal of malachite green dye from aqueous solution by Ulva lactuca, Sargassum crassifolium, and Gracilaria corticata has been demonstrated in order to examine their potential use as low-cost adsorbents. The optimum pH (8.0), temperature (25 °C), contact time (150 min), and biomass (2.0 g) for removal of dye by algae are reported. The maximum removal percentage of the dye ranged between 95.6% and 98.3% by using Sargassum crassifolium at the optimal conditions. Minimum removal of dye by algae (69%-77.1%) was observed with the high dye concentration of 35 mg L-1 at the optimal conditions. Adsorption of the dye by …
A New Species Of Hygrophorus, H. Yadigarii Sp. Nov. (Hygrophoraceae), With An Isolated Systematic Position Within The Genus From The Colchic Part Of Turkey, Ertuğrul Sesli̇, Vladimir Antonin, Marco Contu
Turkish Journal of Botany
Hygrophorus yadigarii (Hygrophoraceae/Basidiomycota) is described as a new species for science based on basidiomata collected from Maçka, Trabzon, Turkey. The new taxon is quite different even from the closest relatives, easily distinguished by the other species because of its grayish to ash-colored, gregarious to subcaespitose, sticky basidioma; a slightly umbonate to depressed pileus; a cylindrical to clavate, grayish stipe; ellipsoid and smooth basidiospores; quite long basidia; clavate, cylindrical or narrowly utriform, apically pyriform or strangulated cheilocystidia; and gelatinous pileipellis. A description with field and micromorphological illustrations, a phylogenetic tree, a simple key, a comparison chart including similar species, and a …
Habitat Effects And Differences In The Reproductive Success Oforchis Punctulata And Orchis Purpurea (Orchidaceae),
2018
TÜBİTAK
Habitat Effects And Differences In The Reproductive Success Oforchis Punctulata And Orchis Purpurea (Orchidaceae), Spyros Tsiftsis, Vladan Djordjevic
Turkish Journal of Botany
The pollination success of two nonrewarding orchids in two coarse habitats was examined. The comparative results of Orchis punctulata and O. purpurea showed a significant differentiation. The fruit set of O. purpurea was significantly greater compared to O. punctulata, whereas both species also had significantly higher fruit set in the grassland compared to the forest. Although the pollination success of O. purpurea was not significantly correlated with plant height, inflorescence size, or nearest neighbor distance, these factors were found to be significantly correlated to the pollination success of O. punctulata. Among these factors, the nearest neighbor distance had the highest …
Pollen Morphology Of Scaligeria Dc. (Apiaceae) In Turkey,
2018
TÜBİTAK
Pollen Morphology Of Scaligeria Dc. (Apiaceae) In Turkey, Ayşe Baldemi̇r, Şenol Alan, Aydan Acar Şahi̇n, Mehmet Yavuz Paksoy, Nur Münevver Pinar
Turkish Journal of Botany
In this study, the pollen morphology of all Scaligeria DC. species distributed in Turkey were studied with light and scanning electron microscopy for the first time. The aim is to contribute to knowledge of the variation among seven Scaligeria species, which have taxonomic problems, based on pollen morphological characteristics by population analysis. The pollen is radially symmetrical, isopolar, and tricolporate in all examined species. Pollen grains are prolate and subprolate with the polar axes ranging from 18.4 to 37 μm and the equatorial axes from 9.8 to 30 μm. Their polar shapes are triangular, triangular to subcircular, circular to subcircular, …
Phenetic Assessment Among Heliotropium L. S.L. Species,
2018
TÜBİTAK
Phenetic Assessment Among Heliotropium L. S.L. Species, Azza El-Hadidy, Asmaa Olwey, Salah El-Naggar
Turkish Journal of Botany
Genus Heliotropium L. (Boraginaceae s.l . ) is one of the difficult taxonomic complexes. The validity of phenetic investigations is often questioned in contrast to the modern phylogenetic approaches. In this study, 120 different populations of 17 Heliotropium taxa were analyzed, using 169 macro- and micromorphological characters to assess the phenetic relationships between taxa. The macromorphology of all parts of the studied taxa (vegetative, floral, and fruit) was investigated, along with some micromorphological characters including indumentum and anatomy. The most significant characters were calyx asymmetry, corolla color and lobe shape, anther connation in young flowers, staminal connective tissue prolongation, shape …
Biomass Production Of Herbaceous Energy Crops In The United States: Field Trial Results And Yield Potential Maps From The Multiyear Regional Feedstock Partnership,
2018
University of Illinois at Urbana-Champaign
Biomass Production Of Herbaceous Energy Crops In The United States: Field Trial Results And Yield Potential Maps From The Multiyear Regional Feedstock Partnership, Dokyoung Lee, Ezra Aberle, Eric K. Anderson, William Anderson, Brian S. Baldwin, David D. Baltensperger, Michael Barrett, Jurg Blumenthal, Stacy Bonos, Joe Bouton, David I. Bransby, Charlie Brummer, Pane S. Burks, Chengci Chen, Christopher Daly, Jose Egenolf, Rodney L. Farris, John H. Fike, Roch E. Gaussoin, John R. Gill, Kenneth Gravois, Michael D. Halbleib, Anna Hale, Wayne Hanna, Keith Harmoney, Emily A. Heaton, Ron W. Heiniger, Lindsey Hoffman, Chang O. Hong, Gopal Kakani, Robert Kallenbach, Bisoondat Macoon, James C. Medley, Ali Missaoui, Robert B. Mitchell, Ken J. Moore, Jesse I. Morrison, Gary N. Odvody, Jonathan D. Richwine, Richard Ogoshi, Jimmy Ray Parrish, Lauren Quinn, Ed Richard, William L. Rooney, J. Brett Rushing, Ronnie Schnell, Matt Sousek, Scott A. Staggenborg, Thomas Tew, Goro Uehara, Donald R. Viands, Thomas Voigt, David Williams, Linda Williams, Lloyd Ted Wilson, Andrew Wycislo, Yubin Yang, Vance Owens
Department of Agronomy and Horticulture: Faculty Publications
Current knowledge of yield potential and best agronomic management practices for perennial bioenergy grasses is primarily derived from small-scale and short-term studies, yet these studies inform policy at the national scale. In an effort to learn more about how bioenergy grasses perform across multiple locations and years, the U.S. Department of Energy (US DOE)/Sun Grant Initiative Regional Feedstock Partnership was initiated in 2008. The objectives of the Feedstock Partnership were to (1) provide a wide range of information for feedstock selection (species choice) and management practice options for a variety of regions and (2) develop national maps of potential feedstock …
A Transcriptome‑Snp‑Derived Linkage Map Of Apios Americana (Potato Bean) Provides Insights About Genome Re‑Organization And Synteny Conservation In The Phaseoloid Legumes, Jugpreet Singh, Scott R. Kalberer, Vikas Belamkar, Teshale Assefa, Matthew N. Nelson, Andrew D. Farmer, William J. Blackmon, Steven B. Cannon
Department of Agronomy and Horticulture: Faculty Publications
Apios (Apios americana; “apios”), a tuberous perennial legume in the Phaseoleae tribe, was widely used as a food by Native Americans. Work in the last 40 years has led to several improved breeding lines. Aspects of the pollination biology (complex floral structure and tripping mechanism) have made controlled crosses difficult, and the previous reports indicated that the plant is likely primarily an outcrosser. We used a pseudo-testcross strategy to construct a genetic map specific to the maternal parent. The map was built using single-nucleotide polymorphism markers identified by comparing the expressed sequences of individuals in the mapping population …
Enhancing Resolution Of Natural Methylome Reprogramming Behavior In Plants,
2018
University of Nebraska-Lincoln
Enhancing Resolution Of Natural Methylome Reprogramming Behavior In Plants, Robersy Sanchez, Xiaodong Yang, Hardik Kundariya, Jose R. Barreras, Yashitola Wamboldt, Sally A. Mackenzie
Department of Agronomy and Horticulture: Faculty Publications
We have developed a novel methylome analysis procedure, Methyl-IT, based on information thermodynamics and signal detection. Methylation analysis involves a signal detection problem, and the method was designed to discriminate methylation regulatory signal from background noise induced by thermal fluctuations. Comparison with three commonly used programs and various available datasets to furnish a comparative measure of resolution by each method is included. To confirm results, methylation analysis was integrated with RNAseq and network enrichment analyses. Methyl-IT enhances resolution of genome methylation behavior to reveal network-associated responses, offering resolution of gene pathway influences not attainable with previous methods.
Assessing Explanatory Factors For Variation In On-Farm Irrigation In Us Maize-Soybean Systems,
2018
University of Nebraska-Lincoln
Assessing Explanatory Factors For Variation In On-Farm Irrigation In Us Maize-Soybean Systems, Katherine E.B. Gibson, Haishun S. Yang, Trenton E. Franz, Dean E. Eisenhauer, John B. Gates, Paolo Nasta, Bhupinder S. Farmaha, Patricio Grassini
Department of Agronomy and Horticulture: Faculty Publications
Irrigation exhibits large variation across producer fields, even within same region and year. A knowledge gap exists relative to factors that explain this variation, in part due to lack of availability of high-quality irrigation data from multiple field-years. This study assessed sources of variation in irrigation using a large database collected during 9 years (2005–2013) from ca. 1400 maize and soybean producer fields in Nebraska, central USA (total of 12,750 field-year observations). The study area is representative of ca. 4.5 million ha of irrigated land sown with maize and soybean. Influence of biophysical (weather, soil, and crop type) and behavioral …
Prospects For Increasing Sugarcane And Bioethanol Production On Existing Crop Area In Brazil,
2018
University of São Paulo
Prospects For Increasing Sugarcane And Bioethanol Production On Existing Crop Area In Brazil, Fábio R. Marin, Geraldo B. Martha Jr., Kenneth Cassman, Patricio Grassini
Department of Agronomy and Horticulture: Faculty Publications
This article assesses sugarcane yield gaps (YG) in Brazil to determine the degree to which production can be increased without land expansion. In our scenario assessments, we evaluated how much of the projected sugarcane demand to 2024 (for both sugar and bioethanol) can be satisfied through YG closure. The current national average yield is 62% of yield potential estimated for rainfed conditions (i.e., a YG of 38%). Continuing the historical rate of yield gain is not sufficient to meet the projected demand without an area expansion by 5% and 45% for lowand high-demand scenarios, respectively. Closing the exploitable YG to …
Biomass Yield Of Warm-Season Grasses Affected By
Nitrogen And Harvest Management,
2018
University of Missouri
Biomass Yield Of Warm-Season Grasses Affected By Nitrogen And Harvest Management, Chamara S. Weerasekara, Newell R. Kitchen, Shibu Jose, Peter P. Motavalli, Sougata Bardhan, Robert B. Mitchell
Department of Agronomy and Horticulture: Faculty Publications
Native perennial warm-season grasses (NPWSG) have drawn interest as bioenergy feedstocks due to their high productivity with minimal amounts of inputs under a wide range of environments. Nitrogen fertility and harvest timing are critical management practices when optimizing biomass yield of NPWSG. Our objective was to quantify the impact of N fertilizer rate and timing in combination with harvest timing and frequency on NPWSG yield. Research was conducted in 2014 and 2015 on four field-plot locations in Missouri. The experiment was a split-plot design with three replications where N rate and harvest timing were the main and sub-plot treatments, respectively. …
Genome-Wide Association Study For
Identification And Validation Of Novel
Snp Markers For Sr6 Stem Rust
Resistance Gene In Bread Wheat,
2018
Assiut University
Genome-Wide Association Study For Identification And Validation Of Novel Snp Markers For Sr6 Stem Rust Resistance Gene In Bread Wheat, Amira M. I. Mourad, Ahmed Sallam, Vikas Belamkar, Stephen N. Wegulo, Robert Bowden, Yue Jin, Ezzat Mahdy, Bahy Bakheit, Atif A. El-Wafaa, Jesse Poland, Peter S. Baenziger
Department of Agronomy and Horticulture: Faculty Publications
Stem rust (caused by Puccinia graminis f. sp. tritici Erikss. & E. Henn.), is a major disease in wheat (Triticum aestivium L.). However, in recent years it occurs rarely in Nebraska due to weather and the effective selection and gene pyramiding of resistance genes. To understand the genetic basis of stem rust resistance in Nebraska winter wheat, we applied genome-wide association study (GWAS) on a set of 270 winter wheat genotypes (A-set). Genotyping was carried out using genotyping-by-sequencing and ~35,000 high-quality SNPs were identified. The tested genotypes were evaluated for their resistance to the common stem rust race in …
Mapping Rootable Depth And Root Zone Plant-Available Water Holding Capacity Of The Soil Of Sub-Saharan Africa, John G. B. Leenaars, Lieven Claessens, Gerard B. M. Heuvelink, Tom Hengl, Maria Ruiperez Gonzalez, Lenny G. J. Van Bussel, Nicolas Guilpart, Haishun Yang, Kenneth G. Cassman
Department of Agronomy and Horticulture: Faculty Publications
In rainfed crop production, root zone plant-available water holding capacity (RZ-PAWHC) of the soil has a large influence on crop growth and the yield response to management inputs such as improved seeds and fertilisers. However, data are lacking for this parameter in sub-Saharan Africa (SSA). This study produced the first spatially explicit, coherent and complete maps of the rootable depth and RZ-PAWHC of soil in SSA. We compiled georeferenced data from 28,000 soil profiles from SSA, which were used as input for digital soil mapping (DSM) techniques to produce soil property maps of SSA. Based on these soil properties, we …
Crop Residue Harvest Impacts Wind Erodibility And
Simulated Soil Loss In The Central Great Plains,
2018
Sichuan University
Crop Residue Harvest Impacts Wind Erodibility And Simulated Soil Loss In The Central Great Plains, Yuxin He, Deann R. Presley, John Tatarko, Humberto Blanco-Canqui
Department of Agronomy and Horticulture: Faculty Publications
Crop residue removal can affect the susceptibility to soil wind erosion in climates such as those of the Central Great Plains, United States. Six on-farm trials were conducted in Kansas from 2011 to 2013 to determine the effects of winter wheat (Triticum aestivum L.), corn (Zea mays L.), and grain sorghum (Sorghum bicolor (L.) Moench), residue removal at 0, 25, 50, 75, and 100% of initial height on soil wind erosion parameters. Those parameters include soil surface random roughness (RR), and wind erodible fraction (EF; aggregates -1 for three hours. Threshold wind velocity required to initiate …
Genetic Diversity And Population
Structure Of F3:6 Nebraska Winter
Wheat Genotypes Using
Genotyping-By-Sequencing,
2018
University of Nebraska-Lincoln
Genetic Diversity And Population Structure Of F3:6 Nebraska Winter Wheat Genotypes Using Genotyping-By-Sequencing, Shamseldeen Eltaher, Ahmed Sallam, Vikas Belamkar, Hamdy A. Emara, Ahmed A. Nower, Khaled F. M. Salem, Jesse Poland, Peter S. Baenziger
Department of Agronomy and Horticulture: Faculty Publications
The availability of information on the genetic diversity and population structure in wheat (Triticum aestivum L.) breeding lines will help wheat breeders to better use their genetic resources and manage genetic variation in their breeding program. The recent advances in sequencing technology provide the opportunity to identify tens or hundreds of thousands of single nucleotide polymorphism (SNPs) in large genome species (e.g., wheat). These SNPs can be utilized for understanding genetic diversity and performing genome wide association studies (GWAS) for complex traits. In this study, the genetic diversity and population structure were investigated in a set of 230 genotypes …
