Terrestrial and Aquatic Ecology Commons^™

Animal Sentience: The Other-Minds Problem, Stevan Harnad

Animal Sentience

The only feelings we can feel are our own. When it comes to the feelings of others, we can only infer them, based on their behavior — unless they tell us. This is the “other-minds problem.” Within our own species, thanks to language, this problem arises only for states in which people cannot speak (infancy, aphasia, sleep, anaesthesia, coma). Our species also has a uniquely powerful empathic or “mind-reading” capacity: We can (sometimes) perceive from the behavior of others when they are in states like our own. Our inferences have also been systematized and operationalized in biobehavioral science …

End-State Welfarism, Joel Marks

Animal Sentience

Yew-Kwang Ng’s research is the work of an obviously sincere, intelligent, and conscientious animal advocate. But I am unable to accept his starting assumption that animal welfare is an appropriate basis for animal ethics. More specifically I argue that animal welfare as a means to animal liberation is an issue that can be debated, but animal welfare as the ultimate end or goal of animal advocacy is misguided.

Going Beyond Just-So Stories, Brian Key

Animal Sentience

Colloquial arguments for fish feeling pain are deeply rooted in anthropometric tendencies that confuse escape responses to noxious stimuli with evidence for consciousness. More developed arguments often rely on just-so stories of fish displaying complex behaviours as proof of consciousness. In response to commentaries on the idea that fish do not feel pain, I raise the need to go beyond just-so stories and to rigorously analyse the neural circuitry responsible for specific behaviours using new and emerging technologies in neuroscience. By deciphering the causal relationship between neural information processing and conscious behaviour, it should be possible to assess cogently the …

Spinning Our Wheels And Deepening The Divide: Call For An Evidence-Based Approach To The Fish Pain Debate, Steven J. Cooke

Animal Sentience

There is vigorous ongoing debate about whether fish feel pain and have the capacity to suffer. The body of literature dedicated to the topic is increasing but what is particularly problematic is that the majority of the contributions represent opinion pieces and thus fall within the realm of advocacy. Many of the empirical research papers purporting that fish do or do not feel pain have problems with cavalier use of definitions, poor experimental design, or statistical/technical issues and tend to include advocacy statements in their interpretations. Rather than continuing to spin our wheels and deepen the divide, I would advocate …

Fish Pain: Would It Change Current Best Practice In The Real World?, B. K. Diggles

Animal Sentience

Much of the “fish pain debate” relates to how high the bar for pain should be set. The close phylogenetic affinities of teleosts with cartilaginous fishes which appear to lack nociceptors suggests caution should be applied by those who seek to lower the bar, especially given the equivocal and conflicting nature of the experimental data currently available for teleosts. Nevertheless, even if we assume fish “feel pain,” it is difficult to see how current best practice in aquaculture would change. This is because of the need to avoid stress at all stages of the rearing process to optimize health, growth …

Leaving The Door Open For Fish Pain: Evolutionary Convergence And The Utility Of ‘Just-So Stories’, David B. Edelman

Animal Sentience

Key argues that fish do not experience pain because they lack the necessary (but not necessarily sufficient) brain structures and associated functional circuitry to engender such conscious percepts. I propose that fish pain may be dependent on neuroanatomical regions and pathways that are structurally and/or functionally analogous — but not strictly homologous — to well-characterized mammalian substrates of pain. An example is the convergent appearance of the complex, single-compartment eye across invertebrate and vertebrate phylogeny. Structural-functional convergence is ubiquitous in evolution. Comparative inferences and correlative lines of evidence play an important role in building evolutionary arguments. The dismissal of the …

Pain-Capable Neural Substrates May Be Widely Available In The Animal Kingdom, Edgar T. Walters

Animal Sentience

Neural and behavioral evidence from diverse species indicates that some forms of pain may be generated by coordinated activity in networks far smaller than the cortical pain matrix in mammals. Studies on responses to injury in squid suggest that simplification of the circuitry necessary for conscious pain might be achieved by restricting awareness to very limited information about a noxious event, possibly only to the fact that injury has occurred, ignoring information that is much less important for survival, such as the location of the injury. Some of the neural properties proposed to be critical for conscious pain in mammals …

How Not To Move The Line Drawn On Pain, Bjorn H. Merker

Animal Sentience

In this second commentary I outline the inadequacy of Key's responses to the many peer critiques of his thesis that have so far appeared in Animal Sentience. I illustrate with examples drawn from his response to my first commentary.

Nonverbal Indicators Of Pain, Simon Van Rysewyk

Animal Sentience

In discussing fish pain, Key (2016) privileges pain in humans — “the only species able to directly report on its feelings.” Human experience of pain is not necessarily best reflected by verbal self-report, however. Neural responses to noxious stimuli are influenced by individual differences and by context. Nonverbal pain displays such as facial expressions reflect part of the neural response to noxious stimuli. Most mammals have a specific facial grimace reflecting pain. If fish have a somatic expression of pain, the development of a reliable and accurate somatic pain scale specific to fish could make a contribution to the debate …

Fish Pain: An Inconvenient Truth, Culum Brown

Animal Sentience

Whether fish feel pain is a hot political topic. The consequences of our denial are huge given the billions of fish that are slaughtered annually for human consumption. The economic costs of changing our commercial fishery harvest practices are also likely to be great. Key outlines a structure-function analogy of pain in humans, tries to force that template on the rest of the vertebrate kingdom, and fails. His target article has so far elicited 34 commentaries from scientific experts from a broad range of disciplines; only three of these support his position. The broad consensus from the scientific community is …

Predicting The Impact Of Future Climate On Ecologically Important Macroalgae, Charlie Phelps

Theses: Doctorates and Masters

Macroalgae play an important role in coastal reef systems and are often referred to as ecosystem engineers. They serve as primary producers, supporting a diverse range of organisms, and are a sink for atmospheric CO2. Water acidification and ocean warming caused by anthropogenic activities are affecting many marine flora and fauna, potentially impacting the physical and chemical performance of macroalgae and the consumption rates of associated herbivores. Many studies have focused on ocean acidification or ocean warming individually but there is an overall lack of research investigating the combined effects and the ensuing repercussions on consumer-prey relationships.

Three species of …

Ability Of Skin Bacteria On The Panamanian Frog Species, Craugastor Fitzingeri, To Inhibit The Fungal Pathogen Batrachochytrium Dendrobatidis, Tiffany N. Bridges

Senior Honors Projects, 2010-2019

An emerging infectious disease caused by the fungus Batrachochytrium dendrobatidis (Bd) is leading to global amphibian declines and is threatening the biodiversity of amphibians. Bd susceptibility varies among individuals, species, and populations perhaps due to defensive mechanisms such as symbiotic skin microbes. Some species of amphibians such as Craugastor fitzingeri, a terrestrial frog native to Central America, continue to persist in Bd-positive environments in Panama. My study focused on identifying antifungal bacterial isolates and determining the culturability of the bacterial community on 15 individuals of C. fitzingeri. Morphologically distinct isolates were challenged against Bd in …

Response Of Fishes To Restoration Projects In Bayou St. John Located Within The City Of New Orleans, Louisiana, Including Hydrological Characterization And Hydrodynamic Modelling, Patrick W. Smith

LSU New Orleans Theses and Dissertations

Quantifying the impacts of restoration on coastal waterways is crucial to understanding their effectiveness. Here, I look at the impacts of multiple restoration projects on urban waterways within the city limits of New Orleans, LA, with an emphasis on the response of fishes. First I report the effects of two projects designed to improve exchange down estuary on the hydrologic characteristics of Bayou St. John (BSJ). Within BSJ, flow is dominated by subtidal wind driven processes. Removal of an outdated flood control structure did not appear to alter exchange in BSJ, but removal combined with sector gate openings did. I …

A Desert In Disguise: The Resilience Of The Nebraska Sandhills, Jeff Hartman

School of Natural Resources: Dissertations, Theses, and Student Research

The Nebraska Sandhills are the largest sand dune system in the Western Hemisphere, and are unique because they remain relatively undisturbed from row crop agriculture. Research in the past two decades demonstrated that the Sandhills are dynamic on millennial timescales, switching between stabilized, vegetated states to non-vegetated, mobilized states. The Sandhills are currently stabilized, but understanding how ecological processes are altered as sand dunes transition from stabilized to mobilized states, provides insight into the thresholds, stability, and resilience of this grassland ecosystem. My research investigated the impacts of vegetation disturbances on ecological processes and the sand dune surface stability. For …

Restoration Of A Wet Longleaf Pine (Pinus Palustris) Savanna In Southeast Louisiana: Burning Toward Reference Conditions, Alex K. Entrup

LSU New Orleans Theses and Dissertations

This study quantifies the changes in vegetation composition and structure of a fire-excluded Pinus palustris (longleaf pine) wetland savanna restoration site in southeastern in comparison to a proximate contemporary reference site. The restoration site was invaded by hardwood species and off-site pines, and never underwent extensive soil disturbance. The restoration treatments involved logging across portions of the site and the reintroduction of fire across the entire site. All species present in 10m² quadrats were recorded prior to treatment and throughout the 17 year study at reference and treatment sites. The community composition of both logged and unlogged sites converged …

Deeply Rooted: The Story Of Congaree National Park, Taylor Karlin

Senior Theses

This photo-essay book was written to fulfill requirements for completion of a senior thesis project to graduate with honors from the South Carolina Honors College. Its purpose is to promote the enjoyment and preservation of the Congaree National Park by educating the public on the historical and ecological significance of the land and the many activities it has to offer. Despite its proximity to downtown Columbia, there remains a lack of public awareness about the park and the amazing activities and opportunities it has to offer. I have compiled information and pictures that will best depict the unique qualities of …

Feeding Ecology Of The Invasive Lionfish (Pterois Spp.) And Comparison With Two Native Species: Schoolmaster Lutjanus Apodus (Walbaum, 1792) And Graysby Cephalopholis Cruentata (Lacepède, 1802), Jesse J. Secord

HCNSO Student Theses and Dissertations

Predator satiation and prey-size preference were determined for locally caught lionfish, schoolmaster, and graysby, all co-occurring predatory fishes in the Florida coral reef ecosystem. Individuals were evaluated by exposing them to wild-caught killifish over a gradient of four size classes (20 mm to 60 mm, in 10 mm increments). Preference trials extended over a 2 hr time period and were filmed to determine the order in which each prey item was consumed. Satiation was evaluated by exposing the predators to an equal number of excess prey items for 24 hrs and evaluating consumed prey weight. Lionfish and schoolmaster showed a …

Eel River Estuary And Centerville Slough Enhancement Project Historic Resources Addendum, Susie Van Kirk

Susie Van Kirk Papers

A collaborative project-Eel River Estuary and Centerville Slough Enhancement Project-involves governmental agencies, non-profits, and landowners with the goal of restoring and improving habitats and agricultural opportunities on lower Eel River and in the area of Centerville in Humboldt County. Multiple project objectives include restoration of ecosystem functions on a landscape, although altered by diking and ditching, still retains a unique complex of wetlands, sloughs, a major river system, and the Pacific Ocean. Modification of artificial controls such as culverts and tide gates, reconnection of watercourses, sediment reduction, and better management of flooding potential are ongoing projects with more proposed, all …

Research Notes Lower Prairie Creek Project, Susie Van Kirk

Susie Van Kirk Papers

No abstract provided.

Environmental Impacts And Carry-Over Effects In Complex Life Cycles: The Role Of Different Life History Stages, Nnaemeka F. Ezeakacha

Dissertations

A challenge faced by organisms with complex life cycles is how environmental factors experienced at an earlier life stage affect the fitness at that stage or are carried over to subsequent life stages. I used container-inhabiting mosquitoes: Aedes albopictus, Aedes aegypti, Aedes triseriatus and Culex quinquefasciatus to study the interactions and performance of life history stages under specific environmental factors. I investigated the effects of egg-desiccation tolerance on egg viability and larval performance in the Aedes mosquitoes. I found increase in egg hatch rate with relative humidity and interaction between relative humidity and egg storage period. Larval performance …

The Abundance And Distribution Of Mallards In The Lower Mississippi Alluvial Valley Of Arkansas, John Andrew Herbert

Graduate Theses and Dissertations

The management of wintering waterfowl in North America requires flexibility because of constantly changing landscapes and conditions. Many mallards use the lower Mississippi Alluvial Valley (MAV) for wintering habitat, making this an area of emphasis for improving management strategies. In this study, I used mallard observation data from 2009-2014 aerial surveys collected in the Arkansas portion of the lower MAV to explain the abundance and distribution and of mallards. Using spatial hierarchical models and breaking covariate data to 2x2 km grid cells, I analyzed how covariates relate to the changes of abundance and distributions within and among surveys. Mallard abundance …

An Inventory Of Endemic Leaf Litter Arthropods Of Arkansas With Emphasis On Certain Insect Groups And Diplopoda, Derek Alan Hennen

Graduate Theses and Dissertations

Endemic arthropods of Arkansas were sampled and their nomenclature and distributions were updated. The Arkansas endemic species list is updated to 121 species, including 16 species of millipedes. A study of the millipedes of Arkansas was undertaken, and resulted in the first checklist and key to all millipede species in the state. 68 species are known from Arkansas, including the genera Cylindroiulus and Polydesmus. The first state records for Ophyiulus pilosus, Cylindroiulus sp., and Ptyoiulus coveanus are reported, and new county records are reported for 16 species. This represents the first key to a state's species since 1980, and the …

Current Status And Long-Term Trends In Water Quality And Living Resources In The Virginia Tributaries And Chesapeake Bay Mainstem From 1985 Through 2014, Daniel M. Dauer, Todd A. Egerton, John R. Donat, Michael F. Lane, Suzanne C. Doughten, Cindy Johnson, Monika Arora

Status and Trends for Virginia Chesapeake Bay

The period prior to the implementation of the Chesapeake Bay Monitoring Program was characterized by a marked decline in the water quality of the Chesapeake Bay. The disappearance of submerged aquatic vegetation in certain regions of the Bay, declines in the abundance of some commercially and recreationally important species, increases in the incidence of low dissolved oxygen events, changes in the Bay's food web, and other ecological problems have been related to the deteriorating water quality (e.g. USEPA, 1982,1983;Officer et al.,1984; Orth and Moore, 1984). The results of concerted research efforts in the late 1970s and early 1980s stimulated the …

Effects Of Wind Turbine Noise On Male Greater Prairie-Chicken Vocalizations And Chorus, Cara E. Whalen

School of Natural Resources: Dissertations, Theses, and Student Research

Wind energy facilities are constructed without full knowledge of their effects on birds, and the noise generated by wind turbines is a particular concern. I investigated the effects of wind turbine noise on male Greater Prairie-Chicken (Tympanuchus cupido pinnatus) vocalizations and chorus near Ainsworth, NE, USA in 2013 and 2014. I studied 14 leks located in the area surrounding a 36-turbine wind energy facility. I used two main approaches in this study. First, I recorded Greater Prairie-Chicken boom, cackle, whine, and whoop vocalizations at each of the study leks and measured the duration, sound pressure level, peak frequency, …

Occupancy Analysis And Density Estimation Of Kori Bustards (Ardeotis Kori) And Helmeted Guineafowl (Numida Meleagris) For Use In Landscape Conservation Planning In The Northern Tuli Game Reserve, Botswana, Kathryn R. Mccollum

School of Natural Resources: Dissertations, Theses, and Student Research

For understudied species, more informed conservation planning and decision-making on both the local and landscape levels may be attained through the use of occupancy and abundance estimations. Here, we focus on two iconic bird species in eastern Botswana, kori bustards (Ardeotis kori) and helmeted guineafowl (Numida meleagris). The overall goal of this project was to better understand the hierarchy of factors that influence occupancy (ψ) and density of kori bustard and helmeted guineafowl populations within the Northern Tuli Game Reserve and how these factors may interact to affect landscape conservation and usage. We performed distance sampling …

Macrobenthic Communities In The Northern Gulf Of Mexico Hypoxic Zone: Testing The Pearson-Rosenberg Model, Shivakumar Shivarudrappa

Dissertations

The Pearson and Rosenberg (P-R) conceptual model of macrobenthic succession was used to assess the impact of hypoxia (dissolved oxygen [DO] ≤ 2 mg/L) on the macrobenthic community on the continental shelf of northern Gulf of Mexico for the first time. The model uses a stress-response relationship between environmental parameters and the macrobenthic community to determine the ecological condition of the benthic habitat. The ecological significance of dissolved oxygen in a benthic habitat is well understood. In addition, the annual recurrence of bottom-water hypoxia on the Louisiana/Texas shelf during summer months is well documented.

The P-R model illustrates the decreasing …

Impacts Of River Influence And Wave Exposure On The Epipsammic Diatoms Of The Lake Superior Wave Zone, Leon R. Katona

All NMU Master's Theses

Although little is known about primary productivity in wave zone habitats of very large lakes, it is presumably dominated by microalgae that attach to mineral substrates. Watershed energetics are linked with these wave zones through river mouth habitats, which provide nutrient and organismal input to lake systems. In this study, I assessed the abundance, productivity, and community composition of epipsammic diatoms in river mouth and beach habitats along the south-central coast of Lake Superior. Chlorophyll a concentrations were more than three-fold greater in river mouths (mean ± 1SE = 1.17 ± 0.45 mg/m²), than in wave zone (0.36 …

Exploring, Exploiting And Evolving Diversity Of Aquatic Ecosystem Models: A Community Perspective, Annette B.G. Janssen, George B. Arhonditsis, Arthur Beusen, Karsten Bolding, Louise Bruce, Jorn Bruggeman, Raoul-Marie Couture, Andrea S. Downing, J. Alex Elliott, Marieke A. Frassl, Gideon Gal, Daan J. Gerla, Matthew R. Hipsey, Fenjuan Hu, Stephen C. Ives, Jan H. Janse, Erik Jeppesen, Klaus D. Jöhnk, David Kneis, Xiangzhen Kong, Jan J. Kuiper, Moritz K. Lehmann, Carsten Lemmen, Deniz Özkundakci, Thomas Petzoldt, Karsten Rinke, Barbara J. Robson, René Sachse, Sebastiaan A. Schep, Martin Schmid, Huub Scholten, Sven Teurlincx, Dennis Trolle, Tineke A. Troost, Anne A. Van Dam, Luuk P.A. Van Gerven, Mariska Weijerman, Scott A. Wells, Wolf M. Mooij

Civil and Environmental Engineering Faculty Publications and Presentations

Here, we present a community perspective on how to explore, exploit and evolve the diversity in aquatic ecosystem models. These models play an important role in understanding the functioning of aquatic ecosystems, filling in observation gaps and developing effective strategies for water quality management. In this spirit, numerous models have been developed since the 1970s. We set off to explore model diversity by making an inventory among 42 aquatic ecosystem modellers, by categorizing the resulting set of models and by analysing them for diversity. We then focus on how to exploit model diversity by comparing and combining different aspects of …

Assessing The Importance Of Nurse Plant Associations To The Growth Of Pre-~Reproductive Yucca Brevifolia, Eric James Chameroy

UNLV Theses, Dissertations, Professional Papers, and Capstones

Facilitation and competition among plant species, in addition to abiotic factors, play an important role in determining plant community structure in arid and semi-arid environments. I conducted a study in Dry Lake Valley, Lincoln County, Nevada, USA to investigate the importance of nurse plant associations to pre-reproductive Yucca brevifolia (Joshua tree). Dry Lake Valley lies within a transition desert between the Mojave and Great Basin Deserts with ecotonal plant communities consisting of species representative of both deserts. A vegetation survey described the communities in which this study was conducted as a Y. brevifolia woodland dominated by an understory of Ephedra …

Expansion Of The Chlorovirus Genus By Studies On Virus Natural History And Chlorella Host Metabolism, Cristian F. Quispe

School of Biological Sciences: Dissertations, Theses, and Student Research

Inland waters cover about 2.5 percent of our planet and harbor huge numbers of known and unknown microorganisms including viruses. Viruses likely play dynamic, albeit largely undocumented roles in regulating microbial communities and in recycling nutrients in the ecosystem. Phycodnaviruses are a genetically diverse, yet morphologically similar, group of large dsDNA-containing viruses (160- to 560-kb) that inhabit aquatic environments. Members of the genus Chlorovirus are common in freshwater. They replicate in eukaryotic, single-celled, chlorella-like green algae that normally exist as endosymbionts of protists in nature. Very little is known about the natural history of the chloroviruses and how they achieve …