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Articles 3481 - 3510 of 6306

Full-Text Articles in Terrestrial and Aquatic Ecology

Coastal Connectivity And Spatial Subsidy From A Microbial Perspective, Christin Säwström, Glenn A. Hyndes, Bradley D. Eyre, Megan J. Huggett, Matthew W. Fraser, Paul S. Lavery, Paul G. Thomson, Flavia Tarquinio, P. D. Steinberg, Bonnie Laverock Jan 2016

Coastal Connectivity And Spatial Subsidy From A Microbial Perspective, Christin Säwström, Glenn A. Hyndes, Bradley D. Eyre, Megan J. Huggett, Matthew W. Fraser, Paul S. Lavery, Paul G. Thomson, Flavia Tarquinio, P. D. Steinberg, Bonnie Laverock

Research outputs 2014 to 2021

The transfer of organic material from one coastal environment to another can increase production in recipient habitats in a process known as spatial subsidy. Microorganisms drive the generation, transformation, and uptake of organic material in shallow coastal environments, but their significance in connecting coastal habitats through spatial subsidies has received limited attention. We address this by presenting a conceptual model of coastal connectivity that focuses on the flow of microbially mediated organic material in key coastal habitats. Our model suggests that it is not the difference in generation rates of organic material between coastal habitats but the amount of organic …

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Accelerating Tropicalization And The Transformation Of Temperate Seagrass Meadows, Glenn A. Hyndes, Kenneth L. Heck, Jnr, Adriana Verges, Euan S. Harvey, Gary A. Kendrick, Paul Lavery, Kathryn Mcmahon, Robert J. Orth, Alan Pearce, Mathew Vanderklift, Thomas Wernberg, Scott Whiting, Shaun Wilson Jan 2016

Accelerating Tropicalization And The Transformation Of Temperate Seagrass Meadows, Glenn A. Hyndes, Kenneth L. Heck, Jnr, Adriana Verges, Euan S. Harvey, Gary A. Kendrick, Paul Lavery, Kathryn Mcmahon, Robert J. Orth, Alan Pearce, Mathew Vanderklift, Thomas Wernberg, Scott Whiting, Shaun Wilson

Research outputs 2014 to 2021

Climate-driven changes are altering production and functioning of biotic assemblages in terrestrial and aquatic environments. In temperate coastal waters, rising sea temperatures, warm water anomalies and poleward shifts in the distribution of tropical herbivores have had a detrimental effect on algal forests. We develop generalized scenarios of this form of tropicalization and its potential effects on the structure and functioning of globally significant and threatened seagrass ecosystems, through poleward shifts in tropical seagrasses and herbivores. Initially, we expect tropical herbivorous fishes to establish in temperate seagrass meadows, followed later by megafauna. Tropical seagrasses are likely to establish later, delayed by …

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Permanent Slides For Morphological Studies Of Small Crustaceans: Serban's Method And Its Variation Applied On Bathynellacea (Malacostraca), Giulia Perina, Ana I. Camacho Jan 2016

Permanent Slides For Morphological Studies Of Small Crustaceans: Serban's Method And Its Variation Applied On Bathynellacea (Malacostraca), Giulia Perina, Ana I. Camacho

Research outputs 2014 to 2021

Morphological studies of small invertebrates often involve the preparation of slides to observe minute body parts under a compound microscope. Preparation should facilitate observation, through traditional optical microscopy, of small surface structures on different planes, like pores, spines and setae. Various methods and techniques, using different mounting media that specialists have adopted to observe and preserve small crustaceans, have their advantages and disadvantages.Within the order Bathynellacea, specimens in the family Bathynellidae are particularly challenging due to their small size (0.5 to 2.25 mm body length) and very delicate exoskeleton, which tends to be completely digested when using common clearing mounting …

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Predicting Suitable Habitat Decline Of Midwestern United States Amphibians And Quantifying The Consequence Of Declines Using Pond-Breeding Salamanders, Brock Struecker Jan 2016

Predicting Suitable Habitat Decline Of Midwestern United States Amphibians And Quantifying The Consequence Of Declines Using Pond-Breeding Salamanders, Brock Struecker

Master's Theses

With current declines of vertebrate taxa meeting or exceeding those of historic mass extinction events, there is a growing need to investigate the main drivers of declines. Amphibians are perhaps at greatest risk of global climate change and land-use changes than most other vertebrate classes and also have significant roles in ecosystem processes – combined, this creates a cause for concern. I designed a study that would investigate the effects of current and predicted climate change and land-use changes on amphibians using species distribution models and a field study to identify the potential consequences of amphibian species declines by investigating …

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Aquatic Insect Community Structure And Secondary Production In Southcentral Alaska Streams With Contrasting Thermal And Hydrologic Regimes, Samantha D. Hertel Jan 2016

Aquatic Insect Community Structure And Secondary Production In Southcentral Alaska Streams With Contrasting Thermal And Hydrologic Regimes, Samantha D. Hertel

Master's Theses

Streams along the Copper River Delta, southcentral Alaska, exhibit contrasting thermal and hydrologic variability associated with being primarily groundwater-fed (GWF) or surface water-fed (SWF). Groundwater-fed streams are predictable both thermally and hydrologically year round, whereas SWF streams are unpredictable and exhibit more variable thermal and hydrologic regimes. These differences may strongly influence aquatic insect community structure and secondary production. Four streams, two GWF and two SWF, were sampled twice monthly from late April 2013 through August 2013 and once seasonally in fall (September) and early winter (November). Aquatic insect community structure differed markedly in both hydrologic types. Taxa richness was …

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Early Round Goby (Neogobius Melanostomus) Invasion Into Lake Michigan Tributaries And Competitive Interactions With Two Native Benthic Fishes., Margaret Ann Malone Jan 2016

Early Round Goby (Neogobius Melanostomus) Invasion Into Lake Michigan Tributaries And Competitive Interactions With Two Native Benthic Fishes., Margaret Ann Malone

Master's Theses

The round goby is a prolific invasive species and is currently spreading into Great Lake tributary streams. There is a high potential for negative impacts on native benthic fishes in these stream habitats and the aim of this study is to assess the impacts of the round goby on two native darter species in particular (johnny darter and blackside darter). I review the history of round goby invasion in the Great Lakes and summarize hypotheses of the invasive characters of the round goby. Using game theory, I provide a G-function approach to understanding the outcomes of the round goby invasion …

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Understanding Emotional Suffering, Barbara J. King Jan 2016

Understanding Emotional Suffering, Barbara J. King

Animal Sentience

In responding to insightful commentaries from 7 scholars, for which I am grateful, I offer new thoughts on whether animals can conceptualize and express signs of grief. I also discuss why I included both weak and strong examples of animal mourning, and how this work may help us think about enhanced welfare for animals, including freedom from emotional suffering.

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Pain In Parallel, Peter Godfrey-Smith Jan 2016

Pain In Parallel, Peter Godfrey-Smith

Animal Sentience

Key's (2016) arguments against the view that fish feel pain can be shown to be fallacious by considering some damage-related behaviors in invertebrates. Pain may have different neural bases in different organisms, so the absence in fish of the cortical structures that might underlie pain in mammals does not settle the question of fish pain.

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Cortex Necessary For Pain — But Not In Sense That Matters, Adam J. Shriver Jan 2016

Cortex Necessary For Pain — But Not In Sense That Matters, Adam J. Shriver

Animal Sentience

Certain cortical regions are necessary for pain in humans in the sense that, at particular times, they play a direct role in pain. However, it is not true that they are necessary in the more important sense that pain is never possible in humans without them. There are additional details from human lesion studies concerning functional plasticity that undermine Key’s (2016) interpretation. Moreover, no one has yet identified any specific behaviors that mammalian cortical pain regions make possible that are absent in fish.

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Falsifying The Null Hypothesis That “Fish Do Not Feel Pain", Brian Key Jan 2016

Falsifying The Null Hypothesis That “Fish Do Not Feel Pain", Brian Key

Animal Sentience

The reader of Animal Sentience may surmise that because the weight of the commentaries on my target article, “Why fish do not feel pain,” is leaning towards not supporting my argument, it follows that the premise "fish do not feel pain" is incorrect. However, science does not prevail by popular opinion. History is plagued with numerous (and often widely accepted) examples of biological phenomena being explained by mysterious forces. In the absence of a mechanistic understanding, the many different guises of vitalism (the principle that life involves a vital energy) are often invoked to explain the unknown. Spurious …

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Ship-Induced Depression Wakes And Shoreline Erosion, Luca Zaggia, Giuliano Lorenzetti, Georgia Manfe, Gian Marco Scarpaf, K. E. Parnell, John Rapaglia, E. Molinaroli Jan 2016

Ship-Induced Depression Wakes And Shoreline Erosion, Luca Zaggia, Giuliano Lorenzetti, Georgia Manfe, Gian Marco Scarpaf, K. E. Parnell, John Rapaglia, E. Molinaroli

Biology Faculty Publications

Shoreline retreat as an effect of ship wakes was studied in a navigation channel of the industrial port of Venice, Italy: the Malamocco -Marghera Channel. The investigation revealed unprecedented erosion rates, up to 4 m y , that determined a total loss of about 1.2 million of m of soil in the period 1970 -2015. This interaction between navigation and the channel margins must be considered in order to understand the past evolution of the central Venice Lagoon and for a sustainable management of the port traffic in the future sea -level rise scenario.

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The Effects Of Tidal Forcing On Nutrient Fluxes In The Tidal, Freshwater James River Estuary, Va, Dana L. Devore Jan 2016

The Effects Of Tidal Forcing On Nutrient Fluxes In The Tidal, Freshwater James River Estuary, Va, Dana L. Devore

Theses and Dissertations

A 12-month study (January to December 2015) focused on the effects of tidal forcing on nutrient fluxes in the tidal, freshwater segment of the James River Estuary (JRE). Discrete sampling of nutrient chemistry and continuous monitoring of tidal discharge were used to determine the volume and timing of the tides, and differences in nutrient concentrations between incoming and outgoing tides. The goal of this study was to improve understanding of tidal influence on nutrient fluxes and their role in nutrient transport to the lower estuary. Results suggested that differences in nutrient concentrations between incoming and outgoing tides were small throughout …

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Forest Stand Structure And Primary Production In Relation To Ecosystem Development, Disturbance, And Canopy Composition, Cynthia M. Scheuermann Jan 2016

Forest Stand Structure And Primary Production In Relation To Ecosystem Development, Disturbance, And Canopy Composition, Cynthia M. Scheuermann

Theses and Dissertations

Temperate forests are complex ecosystems that sequester carbon (C) in biomass. C storage is related to ecosystem-scale forest structure, changing over succession, disturbance, and with community composition. We quantified ecosystem biological and physical structure in two forest chronosequences varying in disturbance intensity, and three late successional functional types to examine how multiple structural expressions relate to ecosystem C cycling. We quantified C cycling as wood net primary production (NPP), ecosystem structure as Simpson’s Index, and physical structure as leaf quantity (LAI) and arrangement (rugosity), examining how wood NPP-structure relates to light distribution and use-efficiency. Relationships between structural attributes of biodiversity, …

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From Seed To Sky: Impacts Of Explosive Compounds On Vegetation Across Spatial And Developmental Scales, Stephen M. Via Jan 2016

From Seed To Sky: Impacts Of Explosive Compounds On Vegetation Across Spatial And Developmental Scales, Stephen M. Via

Theses and Dissertations

Explosive compounds are broadly distributed across the globe as a result of nearly two centuries of munitions use in warfare and military activities. Two explosive compounds have seen disproportionate use; RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) and TNT (2-methyl- 1,3,5-trinitrobenzene), being the most commonly found explosives in the environment. The effects of explosives on biota have been studied in great detail; however, there is a general lack of understanding with regard to broader ecological impacts of these contaminants. My dissertation objective was to follow the impacts of explosive compounds on vegetation across scales. Impacts on vegetation at the species scale alter community composition via …

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Death In The Family, Maria Botero Jan 2016

Death In The Family, Maria Botero

Animal Sentience

Barbara King presents grief as the result of the capacity of human and non-human animals for social and affectionate bonds. This is a novel approach that provides a context for interpreting behavioral evidence of grief. The book also offers thought-provoking insights into the relationship between emotion and the expression of emotion. The most surprising element of King’s approach is that, throughout the book, her account of non-human animal grief forces us to reassess the way we treat them.

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Considering Animals’ Feelings: Précis Of Sentience And Animal Welfare (Broom 2014), Donald M. Broom Jan 2016

Considering Animals’ Feelings: Précis Of Sentience And Animal Welfare (Broom 2014), Donald M. Broom

Animal Sentience

The concept of sentience concerns the capacity to have feelings. There is evidence for sophisticated cognitive concepts and for both positive and negative feelings in a wide range of nonhuman animals. All vertebrates, including fish, as well as some molluscs and decapod crustaceans have pain systems. Most people today consider that their moral obligations extend to many animal species. Moral decisions about abortion, euthanasia, and the various ways we protect animals should take into account the research findings about sentience. In addition, all animal life should be respected and studies of the welfare of even the simplest invertebrate animals should …

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Is Sentience Only A Nonessential Component Of Animal Welfare?, Ian J.H. Duncan Jan 2016

Is Sentience Only A Nonessential Component Of Animal Welfare?, Ian J.H. Duncan

Animal Sentience

According to Broom (2014), animal welfare is a concept that can be applied to all animals, including single-celled organisms that are obviously not sentient. Such a stance makes it difficult to draw a connection between welfare and sentience, and that is the book’s downfall. Some excellent points are made about sentience and there are very good discussions on animal welfare. However, unless sentience is considered the essential component of welfare, any attempt to link the two phenomena will be unsuccessful — and that, indeed, is the case with this book.

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Sentience And Animal Welfare: New Thoughts And Controversies, Donald M. Broom Jan 2016

Sentience And Animal Welfare: New Thoughts And Controversies, Donald M. Broom

Animal Sentience

Sentience involves having some degree of awareness but awareness of self is not as complex as some people believe. Fully functioning vertebrate animals, and some invertebrates, are sentient but neither humans nor non-humans are sentient early in development or if brain-damaged. Feelings are valuable adaptive mechanisms and an important part of welfare but are not all of welfare so the term welfare refers to all animals, not just to sentient animals. We have much to learn about what non-human animals want from us, the functioning of the more complex aspects of their brains and of our brains and how we …

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Determining The Effects Of Non-Native Brook Stickleback (Cualea Inconstans) On The Lentic Systems At Turnbull National Wildlife Refuge, Cheney, Wa, Jenae N. Yri Jan 2016

Determining The Effects Of Non-Native Brook Stickleback (Cualea Inconstans) On The Lentic Systems At Turnbull National Wildlife Refuge, Cheney, Wa, Jenae N. Yri

EWU Masters Thesis Collection

"The introduction of non-native fishes can cause trophic cascades in freshwater habitats; these effects may be amplified in ephemeral/temporary habitats. Non-native brook stickleback fishes (Culaea inconstans) were first documented on the Turnbull National Wildlife Refuge (WA) in 1999 and are now present in many portions of the refuge. The consequences of their presence on the refuge's perennial/permanent and temporary habitats are poorly understood. Therefore, the purpose of my project was to determine if brook stickleback are affecting habitat characteristics that are important for waterfowl nesting success. From April-August 2015, I compared the macro invertebrate and macrophyte community characteristics, fingernail clam …

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Why Fish Do Not Feel Pain, Brian Key Jan 2016

Why Fish Do Not Feel Pain, Brian Key

Animal Sentience

Only humans can report feeling pain. In contrast, pain in animals is typically inferred on the basis of nonverbal behaviour. Unfortunately, these behavioural data can be problematic when the reliability and validity of the behavioural tests are questionable. The thesis proposed here is based on the bioengineering principle that structure determines function. Basic functional homologies can be mapped to structural homologies across a broad spectrum of vertebrate species. For example, olfaction depends on olfactory glomeruli in the olfactory bulbs of the forebrain, visual orientation responses depend on the laminated optic tectum in the midbrain, and locomotion depends on pattern generators …

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Why Human Pain Can’T Tell Us Whether Fish Feel Pain, Victoria A. Braithwaite, Paula Droege Jan 2016

Why Human Pain Can’T Tell Us Whether Fish Feel Pain, Victoria A. Braithwaite, Paula Droege

Animal Sentience

In his target article, Key (2016) reviews the neuroanatomy of human pain and uses what is known about human pain to argue that fish cannot experience pain. We provide three reasons why the conclusions reached by Key are unsupported. They consider (i) why it is not sufficient to conclude that only human neural structures can process conscious pain, (ii) why an understanding of pain in humans and non-human animals needs to be based within a framework of consciousness, and (iii) evidence already exists that fish treated with noxious stimuli lose the ability to perform normal behaviours: This was a behavioral …

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An Invertebrate Perspective On Pain, Jennifer A. Mather Jan 2016

An Invertebrate Perspective On Pain, Jennifer A. Mather

Animal Sentience

Although Key (2016) argues that mammals feel pain and fish do not, from an invertebrate perspective, it is obvious that the pain experience is shared by animals from a number of different animal groups.

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Could Fish Feel Pain? A Wider Perspective, Yew-Kwang Ng Jan 2016

Could Fish Feel Pain? A Wider Perspective, Yew-Kwang Ng

Animal Sentience

Key’s (2016) target article provides some strong arguments but also makes some logical mistakes. The arguments are not sufficient to support a definite conclusion that fish cannot feel pain. A multi-faceted perspective taking into account brain structure, chemical secretion in brain, animal behavior, and evolutionary biology may be useful and appears, at least in some aspects, to suggest the opposite conclusion from that of the target article.


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Should Fish Feel Pain? A Plant Perspective, František Baluška Jan 2016

Should Fish Feel Pain? A Plant Perspective, František Baluška

Animal Sentience

Key (2016) claims fish that fish do not feel pain because they lack the necessary neuronal architecture: their responses to noxious stimuli, according to Key, are executed automatically without any feelings. However, as pointed out by many of his commentators, this conclusion is not convincing. Plants might provide some clues. Plants are not usually thought to be very active behaviorally, but the evidence suggests otherwise. Moreover, in stressful situations, plants produce numerous chemicals that have painkilling and anesthetic properties. Finally, plants, when treated with anesthetics, cannot execute active behaviors such as touch-induced leaf movements or rapid trap closures after localizing …

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A Single Strand Of Argument With Unfounded Conclusion, Robert W. Elwood Jan 2016

A Single Strand Of Argument With Unfounded Conclusion, Robert W. Elwood

Animal Sentience

Key (2016) describes the neural system involved in human pain experience in an excellent fashion but then suggests that only that complete system can generate the experience of pain. Thus animals without all components will not feel pain. This argument has been refuted in the past by analogy to vision where it is clear that a broad range of taxa, vertebrate and invertebrate, have good visual abilities albeit with completely different central nervous systems and receptors. This known counterargument to Key’s main idea is not mentioned in the target article. Further criteria that might indicate pain and studies examining these …

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What Would The Babel Fish Say?, Monica Gagliano Jan 2016

What Would The Babel Fish Say?, Monica Gagliano

Animal Sentience

Starting with its title, Key’s (2016) target article advocates the view that fish do not feel pain. The author describes the neuroanatomical, physiological and behavioural conditions involved in the experience of pain in humans and rodents and confidently applies analogical arguments as though they were established facts in support of the negative conclusion about the inability of fish to feel pain. The logical reasoning, unfortunately, becomes somewhat incoherent, with the arbitrary application of the designated human criteria for an analogical argument to one animal species (e.g., rodents) but not another (fish). Research findings are reported selectively, and questionable interpretations are …

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Pain And Fish Welfare, Eliane Gonçalves-De-Freitas Jan 2016

Pain And Fish Welfare, Eliane Gonçalves-De-Freitas

Animal Sentience

The evolutionary approach of Key’s (2016) target article, generically comparing humans with fish of all kinds, is simplistic. The author ignores published research on structural and molecular aspects of pain in fish. The target article reads more like a selective polemic against fish welfare than an even-handed analysis.

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Brain Processes For “Good” And “Bad” Feelings: How Far Back In Evolution?, Jaak Panksepp Jan 2016

Brain Processes For “Good” And “Bad” Feelings: How Far Back In Evolution?, Jaak Panksepp

Animal Sentience

The question of whether fish can experience pain or any other feelings can only be resolved by neurobiologically targeted experiments. This commentary summarizes why this is essential for resolving scientific debates about consciousness in other animals, and offers specific experiments that need to be done: (i) those that evaluate the rewarding and punishing effects of specific brain regions and systems (for instance, with deep-brain stimulation); (ii) those that evaluate the capacity of animals to regulate their affective states; and (iii) those that have direct implications for human affective feelings, with specific predictions — for instance, the development of new treatments …

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Pain In Fish: Weighing The Evidence, James D. Rose Jan 2016

Pain In Fish: Weighing The Evidence, James D. Rose

Animal Sentience

The target article by Key (2016) examines whether fish have brain structures capable of mediating pain perception and consciousness, functions known to depend on the neocortex in humans. He concludes, as others have concluded (Rose 2002, 2007; Rose et al. 2014), that such functions are impossible for fish brains. This conclusion has been met with hypothetical assertions by others to the effect that functions of pain and consciousness may well be possible through unknown alternate neural processes. Key's argument would be bolstered by consideration of other neurological as well as behavioral evidence, which shows that sharks and ray are fishes …

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Why Is Fish “Feeling” Pain Controversial?, E. Don Stevens Jan 2016

Why Is Fish “Feeling” Pain Controversial?, E. Don Stevens

Animal Sentience

In his excellent target article, Key (2016) develops a mechanistic argument in an attempt to show why it is unlikely that fish can “feel” pain or for that matter, “feel” anything. The topic is controversial and likely to achieve the goal of getting many hits for the inaugural issue of the new journal, Animal Sentience. In my view, the question is unlikely to be answered, for two reasons. First, because the proponents of the “fish feel pain” controversy are untrained and unskilled in the details and jargon of neurophysiology and/or neuroanatomy, and the opponents of the controversy, like Key, …

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