Terrestrial and Aquatic Ecology Commons^™

Dimensional Welfare Beyond Pain: Extending The Precautionary Principle In Birch’S “The Edge Of Sentience”, Willa M. Lane, Nicola S. Clayton

Animal Sentience

Birch's (2024) The Edge of Sentience identifies sentience candidates primarily through the pain-focused LSE Criteria. Yet, as Birch himself notes in Proposal 17, sentience is not pain. We argue that statutory welfare protections must therefore reach beyond pain, and that the right tool for doing so is Birch et al.’s (2020) dimensionality framework, which characterises conscious experience across five domains. Used together, the LSE Criteria establish that welfare is at stake, while the dimensionality framework maps what is at stake beyond pain to provide a taxon-specific profile of where captivity impoverishes experience. We apply this approach to invertebrate welfare and …

Natural Behavior Vs. Subjective Experience In Fish Welfare Assessments, Ronald G. Oldfield

Animal Sentience

Several commentaries on the Oldfield & Bonano (2024) target article proposed that natural behavior should play a larger role in assessing the welfare of fishes in zoos and aquariums. However, the natural-behavior concept of animal welfare has been widely criticized because natural behaviors do not necessarily improve welfare, and unnatural behaviors do not necessarily reduce it. I review the three major concepts of animal welfare — physical health, natural behavior, and affect/feelings — and argue that behavior patterns, whether natural or otherwise, should be evaluated according to their effects on health and subjective experience. Using the affect/feelings concept and the …

Feeding Ecology In Coastal Systems, Randi L. Cannon

Graduate Theses and Dissertations (2019 - present)

Oysters (Crassostrea virginica) are critical foundation species in estuaries, providing numerous ecological and economic benefits. However, oyster populations have diminished worldwide. Effective oyster restoration and aquaculture require a mechanistic understanding of the physiological and environmental factors that govern oyster feeding, growth, and resilience under changing coastal conditions. We investigated how oyster ploidy and environmental conditions influenced oyster feeding and investigated how changes in abiotic conditions affected behavioral performance of oyster drills (Stramonita spp.), a key oyster predator. To better understand feeding responses and behaviors of both predator and prey we 1) used in-situ filter feeding assays to determine if feeding …

Aggression And Fish Welfare: Challenges And Opportunities, Christine M. Soper, Peter D. Dijkstra

Animal Sentience

Oldfield & Bonano’s (2024) [O&B] target article discusses the wellbeing and sociality of bony fishes. Many fish species, such as cichlids, are not only social but territorial. Aggression is normal, but territorial aggression in a captive environment can have a negative impact on welfare. Aggression-related injuries and deaths are prevalent in pet stores as well as research settings. We discuss the need to develop effective methods to minimize the negative consequences of aggression.

Hot Cities, Cool Lizards: Do College Campuses Create Urban Oases For Wildlife?, Ethan Heck, Javier Monzon Phd

Seaver College Research And Scholarly Achievement Symposium

Urban wildlife may experience stress due to the Urban Heat Island Effect. On the other hand, urban wildlife may experience relief, especially in arid ecosystems, due to the Urban Oasis Effect. The objective of this study was to test whether college campuses in southern California act as heat islands or oases for wildlife. We analyzed how temperature and water availability of microhabitats relate to the physiology of a widespread and common cold-blooded animal, the Western Fence Lizard (Sceloporus occidentalis). We logged environmental conditions in lizard hotspots at 11 university campuses across southern California and measured the hydration of lizards at …

Fish Community Assessment Of Goose Pond Natural Area, Macy Sparks

ATU Scholars Symposium

Natural areas play an integral role in the preservation and conservation of unique ecosystems (i.e., natural wetlands). However, many natural areas have never had a biological inventory of species utilizing these areas. Goose Pond Natural Area (Conway County and Pope County, Arkansas) is one of those natural areas lacking species occurrence data. We addressed this data gap by sampling fish species across multiple habitat types (shallow woody wetland, open grassy wetland, and stream). We employed multiple gear types (mesh umbrella minnow traps, seines, gill nets, mini-fyke nets, and backpack electrofishing) in hopes of increasing species detection. Sites within the natural …

Smell Over Sight: Determining Levels Of Olfactory Gene Expression Between Surface And Subterranean Eurycea Salamanders, Sonia Cerrillo, Iliana Melendez, Naomi Ramirez

Posters - 2026

In the karst aquifers of central Texas, including the Edwards and Trinity systems, organisms live in an environment defined by constant temperatures, total darkness, and scarce food resources. These conditions have driven the evolution of salamanders in the genus Eurycea, particularly those that have adapted to subterranean life. Cave-dwelling species like Eurycea rathbuni exhibit hallmark “blind salamander” traits, including educed eyes, loss of pigmentation, and flattened head morphology. In contrast, surface-dwelling relatives such as Eurycea nana and Eurycea sosorum retain fully developed eyes and pigmentation, while some species like Eurycea latitans display both surface and subterranean forms across different populations.

Temporal Avoidance By Gray Foxes Reflects Growing Pressure From Expanding Coyotes In The Neotropics, Madison Odenbach

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Coyotes (Canis latrans) are rapidly expanding their range towards South America, potentially threatening the world’s highest canid diversity residing on that continent. A better understanding of their interactions with native species is needed to anticipate potential competitive impacts. In Costa Rica, native gray foxes (Urocyon cinereoargenteus) likely occupy a similar niche to the coyote newcomer, yet little data exists on their interactions in tropical ecosystems. We hypothesized the two species separate temporally to minimize the potential for competition in our study area, given preliminary data suggesting high spatial overlap (57.1% of coyote-detected sites overlap with fox-detected …

Multiple Burn And Forest Characteristics Affect Gray Fox (Urocyon Cinereoargenteus) Occurrence Following A California Megafire, Amida Zohar Verhey

Cal Poly Humboldt theses and projects

In western North American forests, predator communities are faced with changing fire regimes and increased fire severity and size, particularly with megafires (>10,000 ha). As some wildlife communities may restructure following the loss of apex consumers, understanding post-fire space use of mid-trophic carnivores may inform species composition in these forests. I compared gray fox (Urocyon cinereoargenteus) occupancy in and around the 2021 Dixie Fire, the largest single-ignition fire in California state history, to examine which spatially variable burn and forest characteristics affected the space use of a widespread generalist mesopredator. Using 210 camera traps placed in 2023, …

Western Massasauga (Sistrurus Tergeminus): A Species Conservation Assessment For The Nebraska Natural Legacy Project, Colleen Rothe-Groleau, Melissa J. Panella

Nebraska Game and Parks Commission: Publications

The Nebraska Natural Legacy Project recognizes the western massasauga (Sistrurus tergeminus) as a Tier I at-risk species. Provided are some general management recommendations regarding western massasaugas. Conservation practitioners will need to use professional judgment to make specific management decisions based on objectives, location, and a multitude of variables. This resource was designed to share available knowledge of this at-risk species that will aid in the decision-making process or in identifying research needs to benefit the species.

Criteria for selection as Tier I: State listed, G3

Estimated Population in NE: 1,000–2,500

Estimate based on: Field surveys

Trends since 2005 …

Taxonomy Of Endophytic Fungi Associated With Vallisneria Neotropicalis, Md. Arafat Rashid

Graduate Theses and Dissertations (2019 - present)

This study presents the first comprehensive taxonomic and ecological investigation of endophytic fungi (EF) associated with the submerged aquatic macrophyte Vallisneria neotropicalis in the southern United States. Over a 12 month period, from April 2023 to March 2024, leaf samples were collected from two distinct sites in Mobile Bay, Alabama a disturbed, brackish Causeway location and a cleaner, less impacted site at Meaher State Park. Using culture dependent methods, a total of 257 fungal endophytes were isolated from 1,200 leaf segments. All isolates belonged to the phylum Ascomycota, distributed across 3 classes, 6 orders, 10 families, and 19 taxa. The …

Attributes Of Artificial Wetlands Colonized By Ambystoma Maculatum On A Virginia Surface Mine, Hunter Hill, Garrett Stiltner, Walter H. Smith

Virginia Journal of Science

Landscapes impacted by surface mineral extraction present a range of artificial wetland habitats potentially useable by pool-breeding amphibians, although little information exists in the literature detailing which attributes influence breeding site selection by wetland amphibian specialists in post-mined landscapes. We compared attributes of artificial wetlands consistently used and unused as oviposition sites by Spotted Salamanders (Ambystoma maculatum) over a six-year period on a 120-ha former surface mine in Wise County, Virginia, USA. Salamanders non-randomly selected wetlands as oviposition sites, with one-third of available wetlands within the study area showing evidence of ovipositioning. Wetlands used as breeding sites were …

First Report Of Fibropapillomatosis And Critical Habitat Use In Green Sea Turtles In Curaçao, M. Tripepi, I. J. R. Van Veghel, A. D. Vreugdenhil, E. Brunelli

College of Life Sciences Faculty Papers

Fibropapillomatosis, a disease affecting green sea turtles (Chelonia mydas), has been documented in many regions of the world, including the Caribbean, but has not been scientifically reported in Curaçao until now. The present study utilized VHF telemetry in Caracas Bay, Curaçao, to track green sea turtles, both healthy and affected by fibropapillomatosis, with the objective of ascertaining their foraging locations. VHF telemetry proved to be a pivotal method for assessing habitat use in areas characterized by limited visibility and high boat traffic, conditions that present significant challenges for divers and snorkellers attempting to access the area. The results …

Distributional Records Of Blanding’S Turtles (Emydoidea Blandingii) In Nebraska, Sam Thede, Dan Fogell, Keith Geluso

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Blanding’s Turtle (Emydoidea blandingii) is a species of concern in North America as many populations have declined across its distribution. Environmental factors associated with alteration of natural ecosystems have played a role in declines leading to many isolated populations. Most populations exist in the Great Lakes region with a number of outlying populations, such as Nebraska. Understanding the current distribution of the species will facilitate regional management strategies to protect this species into the future. In Nebraska, Blanding’s Turtles were known from 23 counties prior to this study. Herein, we report on eight new county records, five (Blaine, …

More Equal Than Others: Taxonomic Bias In Animal Management, Barrett L. Christie

Animal Sentience

Oldfield & Bonano (2024) point out not only the scarcity of research on fish welfare but also significant taxonomic bias in broader research on these species. This bias extends to the management practices of aquaria and zoos, where the focus is on higher vertebrates. More resources need to be allocated to research to address this disparity. We also need to develop welfare constructs that recognize the inherent differences between aquatic and terrestrial species, taking into account the unique ecological contexts and behavioral patterns of fishes.

Impact Of Unconventional Gas Extraction On Tributaries Of Tenmile Creek, Greene County, Pennsylvania: A 12-Year Perspective, Christian L. Beall

Electronic Theses and Dissertations

Much of southwestern Pennsylvania has been central to a rapid increase in development for unconventional natural gas extraction in the past two decades. The continued monitoring of streams over their lifetime as extraction sites is pivotal to understanding the effects of fracking on local waterways and their ability to provide for wildlife and human use. Here, using multiple indices of biotic integrity (IBI), I perform analyses of fish and macroinvertebrate communities as well as water chemistry on two streams, Bates Fork (with shale wells) and Fonner Run (without), as part of a follow-up to work performed there from 2010-2012. Fish …

Demography Of Alligator Snapping Turtles (Macrochelys Temminckii) Along A Fishing Pressure Gradient, Luke T. Micek

Electronic Theses and Dissertations

Passive fishing gear is a threat to the alligator snapping turtle (Macrochelys temminckii). The spatio-temporal persistence of this threat and its impacts on M. temminckii populations has not been quantified. I quantified the density of passive fishing gear and the demographic parameters of M. temminckii along a fishing pressure gradient in East Texas streams. Most gear was abandoned and illegally deployed, with densities varying seasonally. Detectability of passive fishing gear declined with increasing gear age, water depth, and volume, but increased with increasing precipitation. Macrochelys temminckii catch per unit effort, abundance, and survival was lower at sites with …

The Impact Of Maternal Age On The Expression Of Transgenerational Plasticity In Daphnia Pulicaria, Calvin Nguyen

2025 Spring Honors Capstone Projects - Archive

Transgenerational plasticity refers to heritable, non-genetic changes in phenotype that persist across multiple generations and can enhance offspring survivability in variable environments. In Daphnia, increasing maternal age has been associated with maladaptive plasticity. To investigate this relationship, six clones were collected from two Wisconsin lakes and acclimated to laboratory conditions through a common garden rearing process. For each clone, ten replicates were generated and evenly divided between young (clutches 2–4) and old (clutches 5–8) maternal age groups. Offspring were exposed to three dietary treatments for three experimental generations: one fed only green algae, one fed only cyanobacteria (a nutritionally …

Epidemiological Inferences Of The Impacts Of Winter Ticks On Moose Health, Krishna S. Woerheide

Department of Entomology: Dissertations, Theses, and Student Research

The North American Moose (mooz in Anishinaabemowin, Ojibwe language, Alces alces), a culturally significant subsistence species for the Anishinaabe people, faces population decline due to calf predation, pathogen transmission, and parasitism by the winter tick (Dermacentor albipictus), all exacerbated by climate change. This study explores the impact of winter tick infestations on moose health, with a focus on natural mineral seeps as potential transmission hotspots in moose habitats within the Grand Portage Indian Reservation (Gichi Onigaming), on Isle Royale National Park (Minong), and within the 1854 Ceded Territory (greater northeastern Minnesota) - ancestral and present homelands of …

Spatial Ecology And Predator–Prey Interactions Of Mountain Lions In California's San Francisco North Bay, Jacob A. Harvey

School of Natural Resources: Dissertations, Theses, and Student Research

Understanding spatial ecology and predator-prey interactions are central to wildlife ecology and conservation. We tracked mountain lions with GPS telemetry to evaluate space use, predator-prey interactions, and resource selection in California’s San Francisco North Bay, USA. In Chapter 1, we evaluated the influence of human disturbance on home range size, prey composition, and kill rates on black-tailed deer (Odocoileus hemionus columbianus) across an urban-rural gradient. Both males and females increased home range size with increasing development at low to moderate levels of development, but female home range size stabilized across greater proportions of development while male home range …

A Population Study Of The Freshwater Turtles Of The Recently Expanded Lake Hydaway In Campbell County, Virginia, Joshua Sorenson

Senior Honors Theses

Freshwater turtles are an important part of the ecological systems in central Virginia. At the recently expanded Lake Hydaway, there are several turtle species for which their population characteristics were unknown, especially the prolific Eastern Painted Turtle (Chrysemys picta picta) and Red-bellied Cooter (Pseudemys rubriventris). For five weeks, the lake was surveyed for turtles using hoop nets, and the turtles were marked and measured. Population characteristics such as carapace length and sex ratio for the Eastern Painted Turtle and Red-bellied Cooter were calculated, as well as population estimates for those two species. The Red-eared Slider ( …

‘Who’S Your Daddy?’: Ddradseq Parentage In Broodstock-Offspring Pairs Of Diadema Antillarum In A Population Restoration Initiative, Bianca R. Rosendahl

Undergraduate Scholarship and Creative Works

In the early 1980s Diadema antillarum, or the long-spined urchin, was hit by a catastrophic mass mortality event across the western Atlantic and Gulf of Mexico, inclusive of the Florida Keys. The cause of this die-off event was likely triggered by a pathogen or environmental stressor that decimated native populations by up to 98%. The species has not yet fully recovered and is struggling with recruitment success which is why it may benefit from an ex-situ recovery program. In this study, I used single nucleotide polymorphisms (SNPs) to identify genetic variation and analyze parentage in a captive population of …

Précis Of The Edge Of Sentience: Risk And Precaution In Humans, Other Animals, And Ai, Jonathan Birch

Animal Sentience

We often face grave practical decisions that seem to hinge on whether a system is sentient. This family of cases includes invertebrate animals, people who are unresponsive after brain injury, fetuses, neural organoids, and now AI technologies. We must decide what to do despite ongoing disagreement about the nature of sentience. In our state of uncertainty, we should pragmatically transform the question from “Is it sentient?” to “Is it a sentience candidate, an investigation priority, or neither?”. When a system is a sentience candidate, it is negligent to fail to consider precautions. We should instead evaluate precautions for their proportionality …

Assessing Intra-Seasonal Changes In Summer Elk Diet Composition, Ava E. Window

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Elk (Cervus canadensis) require adequate forage to fulfill their seasonal nutritional requirements. Elk undergo their highest nutritional demands during summer to support critical life functions such as late gestation, lactation, and juvenile growth. However, variations in plant phenology significantly influence the quality and quantity of forage available to elk during the summer season. As summer advances and plant communities mature, forage quality often declines, leading to a landscape that imposes greater nutritional constraints on elk. As a result, prior research on elk foraging habits has primarily focused on late summer. This has led to limited knowledge surrounding the …

Distribution And Ecology Of The Cedar Keys Mole Skink (Plestiodon Egregius Insularis), Kevin M. Enge, Louis A. Somma, Paul E. Moler, Travis M. Thomas, Matthew T. Fedler, John M. Matter, Dennis C. Haney

Papers in Herpetology

We conducted surveys for the Cedar Keys Mole Skink, Plestiodon egregius insularis (Mount), during 1989– 1999 and 2015–2024, examined museum vouchers, and compiled personal observations from others to determine the status and distribution of this subspecies, which has the smallest geographic distribution of the five subspecies and is being considered for federal listing. We observed Cedar Keys Mole Skinks on Airstrip Island, Atsena Otie, Cedar Point, Deer Island, North Key, Scale Key, Seahorse Key, Snake Key, and possibly Dog Island. We have anecdotal reports of Mole Skinks on Way Key, which contains the most potential habitat and is the main …

Native Freshwater Mussel Communities In The Lower Grand River, Michigan: Assessing Tributary Confluence Effects And Updating Survey Information, Grayson L. Kosak

Masters Theses

Freshwater mussels (Unionidae) are ecosystem engineers and keystone species vital to stream ecosystems yet represent the most imperiled group of freshwater fauna. Conservation of unionids necessitates further understanding how assemblages interact with watershed features. This study investigates mussel occupancy, distribution, and assemblage structure upstream and downstream of tributary confluences in the lower Grand River, Michigan, alongside updated surveys of the unionid community with comparisons to previous assessments conducted by Michigan Natural Features Inventory (MNFI) in 2002–2003. Unionid density, richness, and diversity were greater upstream of confluences. No significant distance-gradient effects were observed. Assemblage structure differed between upstream and downstream reaches …

Alabama Agricultural Producers’ Experiences With Wild Pigs (Sus Scrofa) And Their Preferences Concerning Wild Pig Management, Hailey E. Ellis, Luren M. Jaebker, Alan D. Bright, Mark D. Smith, Keith M. Carlisle

United States Department of Agriculture Wildlife Services: Staff Publications

Government agencies and landowners use a variety of lethal methods to reduce invasive wild pig populations and resulting agricultural damages. To provide decision-makers with information regarding Alabama farmers’ experiences with wild pigs and their preferences for management actions, we surveyed Alabama Farmers Federation members in 2020. We found that wild pigs were commonly present on livestock, timber, and crop production acreage, but wild pig damages and costs were much more common among crop producers. Respondents' wildlife acceptance capacity for wild pigs was low and all lethal control methods were considered aceptable by most reposndents, particularly those performed by landowners. While …

Habitat Preferences Of The Hiwassee Crayfish (Cambarus Hiwasseensis) And Appalachian Brook Crayfish (Cambarus Bartonii Cavatus) In A Headwater Stream, Johnathan G. Davis

Georgia Journal of Science

The Hiwassee crayfish Cambarus hiwasseensis (CH) is an endemic species to the Hiwassee River watershed in north Georgia and western North Carolina that is sympatric with the more widespread Appalachian Brook crayfish Cambarus bartonii cavatus (CB). This was the first study to investigate CH habitat use, comparing CH habitat to CB habitat in Corn Creek, a small, second-order stream in the Hiwassee River watershed. From August to November 2016 and January to April 2018, 15 habitat parameters were measured for 154 1-m² quadrants randomly sampled from an 800-m stream reach. Mann-Whitney U tests compared habitat parameters between present and …

Understanding The Welfare Of Aquarium Fish, Paul Rose

Animal Sentience

Bony fishes (Osteichthyes) are prevalent in public and domestic aquaria, yet evidence-based welfare practices exist for only a limited number of species. Oldfield & Bonano’s (O&B’s) target article highlights critical questions about the wellbeing and sociality of Osteichthyes. Advancing research on their biology, physiology, psychology, and behavior is essential to develop and validate welfare measures, ensuring guidelines for welfare-focused housing and husbandry.

Microplastic Accumulation In The Marsh Periwinkle (Littoraria Irrorata), Sarah Keaton, Hannah Lukhard, Eli Windy, Manar Hasan

DePaul Discoveries

Contamination of oceans by microplastics (mm) currently poses a major threat to aquatic and terrestrial ecosystems worldwide. Recent attention towards this issue has raised questions about the extent to which microplastics have accumulated in the environment, and has led to an increase in studies on the effects of microplastics in various organisms. However, levels of contamination in protected natural areas are still largely unexplored, yet can offer an important empirical perspective on the issue. In addition, little is known about the potential effects of microplastics on behavior in the field. This research was conducted within the protected ACE Basin National …